Bombyx BLAST Result against arabidopsis

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= prgv0311
         (691 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At2g02020.1 68415.m00137 proton-dependent oligopeptide transport...    31   0.54 
At3g54450.1 68416.m06024 proton-dependent oligopeptide transport...    30   1.3  
At3g47960.1 68416.m05229 proton-dependent oligopeptide transport...    30   1.3  
At1g69870.1 68414.m08041 proton-dependent oligopeptide transport...    30   1.7  
At1g27080.1 68414.m03301 proton-dependent oligopeptide transport...    30   1.7  
At5g62680.1 68418.m07866 proton-dependent oligopeptide transport...    29   3.8  
At1g32450.1 68414.m04005 proton-dependent oligopeptide transport...    28   6.7  
At1g62200.1 68414.m07016 proton-dependent oligopeptide transport...    27   8.9  
At1g18880.1 68414.m02350 proton-dependent oligopeptide transport...    27   8.9  

>At2g02020.1 68415.m00137 proton-dependent oligopeptide transport
           (POT) family protein contains Pfam profile: PF00854 POT
           family
          Length = 545

 Score = 31.5 bits (68), Expect = 0.54
 Identities = 12/24 (50%), Positives = 15/24 (62%)
 Frame = +2

Query: 80  WSACNLVHVTEVKLLLRYVVLWFS 151
           W  C +  V EVK+LLR V +W S
Sbjct: 297 WKLCTVTQVEEVKILLRLVPIWAS 320


>At3g54450.1 68416.m06024 proton-dependent oligopeptide transport
           (POT) family protein contains Pfam profile: PF00854 POT
           family
          Length = 488

 Score = 30.3 bits (65), Expect = 1.3
 Identities = 11/24 (45%), Positives = 15/24 (62%)
 Frame = +2

Query: 80  WSACNLVHVTEVKLLLRYVVLWFS 151
           W  C +  V EVKL+LR + +W S
Sbjct: 226 WRLCTVNQVEEVKLILRLIPIWIS 249


>At3g47960.1 68416.m05229 proton-dependent oligopeptide transport
           (POT) family protein contains Pfam profile: PF00854 POT
           family
          Length = 606

 Score = 30.3 bits (65), Expect = 1.3
 Identities = 10/24 (41%), Positives = 15/24 (62%)
 Frame = +2

Query: 80  WSACNLVHVTEVKLLLRYVVLWFS 151
           W  C L  V EVK ++R + +WF+
Sbjct: 324 WKLCTLQQVEEVKCIVRVIPIWFA 347


>At1g69870.1 68414.m08041 proton-dependent oligopeptide transport
           (POT) family protein contains Pfam profile: PF00854 POT
           family
          Length = 620

 Score = 29.9 bits (64), Expect = 1.7
 Identities = 11/23 (47%), Positives = 15/23 (65%)
 Frame = +2

Query: 77  KWSACNLVHVTEVKLLLRYVVLW 145
           KW  C++  V EVK L+R V +W
Sbjct: 346 KWRLCSVQEVEEVKCLIRIVPIW 368


>At1g27080.1 68414.m03301 proton-dependent oligopeptide transport
           (POT) family protein similar to nitrate transporter
           NRT1-5 [Glycine max] GI:11933414; contains Pfam profile
           PF00854: POT family
          Length = 525

 Score = 29.9 bits (64), Expect = 1.7
 Identities = 11/23 (47%), Positives = 15/23 (65%)
 Frame = +2

Query: 77  KWSACNLVHVTEVKLLLRYVVLW 145
           KW  C++  V EVK L+R V +W
Sbjct: 257 KWRLCSIQEVEEVKCLIRVVPVW 279


>At5g62680.1 68418.m07866 proton-dependent oligopeptide transport
           (POT) family protein contains Pfam profile: PF00854 POT
           family
          Length = 616

 Score = 28.7 bits (61), Expect = 3.8
 Identities = 9/24 (37%), Positives = 15/24 (62%)
 Frame = +2

Query: 80  WSACNLVHVTEVKLLLRYVVLWFS 151
           W  C +  V EVK ++R + +WF+
Sbjct: 338 WKLCTMQQVEEVKCIVRVLPIWFA 361


>At1g32450.1 68414.m04005 proton-dependent oligopeptide transport
           (POT) family protein contains Pfam profile: PF00854 POT
           family
          Length = 614

 Score = 27.9 bits (59), Expect = 6.7
 Identities = 12/31 (38%), Positives = 17/31 (54%)
 Frame = +2

Query: 53  KNQTIINKKWSACNLVHVTEVKLLLRYVVLW 145
           K Q  +N  W  C +  V EVK +LR + +W
Sbjct: 328 KKQDSVNP-WRLCPVTQVEEVKCILRLMPIW 357


>At1g62200.1 68414.m07016 proton-dependent oligopeptide transport
           (POT) family protein contains Pfam profile: PF00854 POT
           family ; contains non-consensus GA donor site at intron
           4
          Length = 590

 Score = 27.5 bits (58), Expect = 8.9
 Identities = 10/24 (41%), Positives = 13/24 (54%)
 Frame = +2

Query: 80  WSACNLVHVTEVKLLLRYVVLWFS 151
           W  C +  V EVK L+R   +W S
Sbjct: 347 WKLCTVTQVEEVKTLIRMFPIWAS 370


>At1g18880.1 68414.m02350 proton-dependent oligopeptide transport
           (POT) family protein contains Pfam profile: PF00854 POT
           family
          Length = 587

 Score = 27.5 bits (58), Expect = 8.9
 Identities = 9/24 (37%), Positives = 15/24 (62%)
 Frame = +2

Query: 80  WSACNLVHVTEVKLLLRYVVLWFS 151
           W  C++  V EVK ++R + +W S
Sbjct: 312 WKLCSMQQVEEVKCVIRVLPVWLS 335


  Database: arabidopsis
    Posted date:  Oct 4, 2007 10:56 AM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,887,310
Number of Sequences: 28952
Number of extensions: 237186
Number of successful extensions: 413
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 405
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 413
length of database: 12,070,560
effective HSP length: 79
effective length of database: 9,783,352
effective search space used: 1467502800
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)