Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= prgv0310
(635 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Y10017-1|CAA71124.1| 166|Drosophila melanogaster ribosomal prot... 91 9e-19
Y10015-2|CAA71121.1| 166|Drosophila melanogaster ribosomal prot... 91 9e-19
Y09766-1|CAA70905.1| 166|Drosophila melanogaster ribosomal prot... 91 9e-19
BT021213-1|AAX33361.1| 177|Drosophila melanogaster RH72463p pro... 91 9e-19
BT016128-1|AAV37013.1| 167|Drosophila melanogaster GM06787p pro... 91 9e-19
AE014296-1484|AAF50393.1| 166|Drosophila melanogaster CG6253-PA... 91 9e-19
AE014134-600|AAF51111.1| 181|Drosophila melanogaster CG31952-PA... 29 7.0
AY095074-1|AAM11402.1| 397|Drosophila melanogaster RE21802p pro... 28 9.2
AJ001164-1|CAA04568.1| 1668|Drosophila melanogaster Additional s... 28 9.2
AE014298-1368|AAN09614.1| 397|Drosophila melanogaster CG1354-PD... 28 9.2
AE014298-1367|AAN09613.1| 397|Drosophila melanogaster CG1354-PC... 28 9.2
AE014298-1366|AAF46520.2| 397|Drosophila melanogaster CG1354-PA... 28 9.2
AE013599-1902|AAF58239.1| 1669|Drosophila melanogaster CG8787-PA... 28 9.2
>Y10017-1|CAA71124.1| 166|Drosophila melanogaster ribosomal protein
L14 protein.
Length = 166
Score = 91.5 bits (217), Expect = 9e-19
Identities = 39/55 (70%), Positives = 49/55 (89%)
Frame = +3
Query: 90 GPLKGKLVSVVDVIDQTRALVDGPGSGVPRQQIRLNQLHLTKFRLKYAFTAPTRL 254
GPLKG+LV++VDVIDQ R LVDGP +GVPRQ+ RLN LHLTK+R+K+ +TAPTR+
Sbjct: 18 GPLKGRLVAIVDVIDQNRVLVDGPLTGVPRQEYRLNNLHLTKYRIKFPYTAPTRI 72
Score = 70.5 bits (165), Expect = 2e-12
Identities = 47/145 (32%), Positives = 71/145 (48%), Gaps = 6/145 (4%)
Frame = +2
Query: 38 MPFARYVEPGRVALVSRRSLKGK------VSERGRRY*PNSCTG*WTRQWST*ATDPLKP 199
MPF R+V+ GR+A S LKG+ V ++ R TG +++ L
Sbjct: 1 MPFERFVQTGRIAKASAGPLKGRLVAIVDVIDQNRVLVDGPLTGVPRQEYR------LNN 54
Query: 200 TPSHKIPPQIRVHSPYSSLRKAWTDAKLNEKWTESQWAQKLANKEKRAQMTDYDRFKLTA 379
K + +P +RKAWT++ L +W S W+ K N KR+ + D+DRFKL
Sbjct: 55 LHLTKYRIKFPYTAPTRIVRKAWTESDLKAQWKVSPWSVKAQNICKRSSLNDFDRFKLRY 114
Query: 380 ARVKRNRARTAVFKSLKVKAARAGT 454
A+ +RN+ T F +LK + GT
Sbjct: 115 AKRQRNKLLTIAFNTLKKRTKADGT 139
>Y10015-2|CAA71121.1| 166|Drosophila melanogaster ribosomal protein
L14 protein.
Length = 166
Score = 91.5 bits (217), Expect = 9e-19
Identities = 39/55 (70%), Positives = 49/55 (89%)
Frame = +3
Query: 90 GPLKGKLVSVVDVIDQTRALVDGPGSGVPRQQIRLNQLHLTKFRLKYAFTAPTRL 254
GPLKG+LV++VDVIDQ R LVDGP +GVPRQ+ RLN LHLTK+R+K+ +TAPTR+
Sbjct: 18 GPLKGRLVAIVDVIDQNRVLVDGPLTGVPRQEYRLNNLHLTKYRIKFPYTAPTRI 72
Score = 70.5 bits (165), Expect = 2e-12
Identities = 47/145 (32%), Positives = 71/145 (48%), Gaps = 6/145 (4%)
Frame = +2
Query: 38 MPFARYVEPGRVALVSRRSLKGK------VSERGRRY*PNSCTG*WTRQWST*ATDPLKP 199
MPF R+V+ GR+A S LKG+ V ++ R TG +++ L
Sbjct: 1 MPFERFVQTGRIAKASAGPLKGRLVAIVDVIDQNRVLVDGPLTGVPRQEYR------LNN 54
Query: 200 TPSHKIPPQIRVHSPYSSLRKAWTDAKLNEKWTESQWAQKLANKEKRAQMTDYDRFKLTA 379
K + +P +RKAWT++ L +W S W+ K N KR+ + D+DRFKL
Sbjct: 55 LHLTKYRIKFPYTAPTRIVRKAWTESDLKAQWKVSPWSVKAQNICKRSSLNDFDRFKLRY 114
Query: 380 ARVKRNRARTAVFKSLKVKAARAGT 454
A+ +RN+ T F +LK + GT
Sbjct: 115 AKRQRNKLLTIAFNTLKKRTKADGT 139
>Y09766-1|CAA70905.1| 166|Drosophila melanogaster ribosomal protein
L14 protein.
Length = 166
Score = 91.5 bits (217), Expect = 9e-19
Identities = 39/55 (70%), Positives = 49/55 (89%)
Frame = +3
Query: 90 GPLKGKLVSVVDVIDQTRALVDGPGSGVPRQQIRLNQLHLTKFRLKYAFTAPTRL 254
GPLKG+LV++VDVIDQ R LVDGP +GVPRQ+ RLN LHLTK+R+K+ +TAPTR+
Sbjct: 18 GPLKGRLVAIVDVIDQNRVLVDGPLTGVPRQEYRLNNLHLTKYRIKFPYTAPTRI 72
Score = 70.5 bits (165), Expect = 2e-12
Identities = 47/145 (32%), Positives = 71/145 (48%), Gaps = 6/145 (4%)
Frame = +2
Query: 38 MPFARYVEPGRVALVSRRSLKGK------VSERGRRY*PNSCTG*WTRQWST*ATDPLKP 199
MPF R+V+ GR+A S LKG+ V ++ R TG +++ L
Sbjct: 1 MPFERFVQTGRIAKASAGPLKGRLVAIVDVIDQNRVLVDGPLTGVPRQEYR------LNN 54
Query: 200 TPSHKIPPQIRVHSPYSSLRKAWTDAKLNEKWTESQWAQKLANKEKRAQMTDYDRFKLTA 379
K + +P +RKAWT++ L +W S W+ K N KR+ + D+DRFKL
Sbjct: 55 LHLTKYRIKFPYTAPTRIVRKAWTESDLKAQWKVSPWSVKAQNICKRSSLNDFDRFKLRY 114
Query: 380 ARVKRNRARTAVFKSLKVKAARAGT 454
A+ +RN+ T F +LK + GT
Sbjct: 115 AKRQRNKLLTIAFNTLKKRTKADGT 139
>BT021213-1|AAX33361.1| 177|Drosophila melanogaster RH72463p
protein.
Length = 177
Score = 91.5 bits (217), Expect = 9e-19
Identities = 39/55 (70%), Positives = 49/55 (89%)
Frame = +3
Query: 90 GPLKGKLVSVVDVIDQTRALVDGPGSGVPRQQIRLNQLHLTKFRLKYAFTAPTRL 254
GPLKG+LV++VDVIDQ R LVDGP +GVPRQ+ RLN LHLTK+R+K+ +TAPTR+
Sbjct: 29 GPLKGRLVAIVDVIDQNRVLVDGPLTGVPRQEYRLNNLHLTKYRIKFPYTAPTRI 83
Score = 72.5 bits (170), Expect = 4e-13
Identities = 48/147 (32%), Positives = 73/147 (49%), Gaps = 6/147 (4%)
Frame = +2
Query: 32 NVMPFARYVEPGRVALVSRRSLKGK------VSERGRRY*PNSCTG*WTRQWST*ATDPL 193
+VMPF R+V+ GR+A S LKG+ V ++ R TG +++ L
Sbjct: 10 SVMPFERFVQTGRIAKASAGPLKGRLVAIVDVIDQNRVLVDGPLTGVPRQEYR------L 63
Query: 194 KPTPSHKIPPQIRVHSPYSSLRKAWTDAKLNEKWTESQWAQKLANKEKRAQMTDYDRFKL 373
K + +P +RKAWT++ L +W S W+ K N KR+ + D+DRFKL
Sbjct: 64 NNLHLTKYRIKFPYTAPTRIVRKAWTESDLKAQWKVSPWSVKAQNICKRSSLNDFDRFKL 123
Query: 374 TAARVKRNRARTAVFKSLKVKAARAGT 454
A+ +RN+ T F +LK + GT
Sbjct: 124 RYAKRQRNKLLTIAFNTLKKRTKADGT 150
>BT016128-1|AAV37013.1| 167|Drosophila melanogaster GM06787p
protein.
Length = 167
Score = 91.5 bits (217), Expect = 9e-19
Identities = 39/55 (70%), Positives = 49/55 (89%)
Frame = +3
Query: 90 GPLKGKLVSVVDVIDQTRALVDGPGSGVPRQQIRLNQLHLTKFRLKYAFTAPTRL 254
GPLKG+LV++VDVIDQ R LVDGP +GVPRQ+ RLN LHLTK+R+K+ +TAPTR+
Sbjct: 19 GPLKGRLVAIVDVIDQNRVLVDGPLTGVPRQEYRLNNLHLTKYRIKFPYTAPTRI 73
Score = 66.1 bits (154), Expect = 4e-11
Identities = 45/144 (31%), Positives = 69/144 (47%), Gaps = 6/144 (4%)
Frame = +2
Query: 41 PFARYVEPGRVALVSRRSLKGK------VSERGRRY*PNSCTG*WTRQWST*ATDPLKPT 202
PF R+V+ GR+A S LKG+ V ++ R TG +++ L
Sbjct: 3 PFERFVQTGRIAKASAGPLKGRLVAIVDVIDQNRVLVDGPLTGVPRQEYR------LNNL 56
Query: 203 PSHKIPPQIRVHSPYSSLRKAWTDAKLNEKWTESQWAQKLANKEKRAQMTDYDRFKLTAA 382
K + +P +RKAW ++ L +W S W+ K N KR+ + D+DRFKL A
Sbjct: 57 HLTKYRIKFPYTAPTRIVRKAWIESDLKAQWKVSPWSVKAQNICKRSSLNDFDRFKLRYA 116
Query: 383 RVKRNRARTAVFKSLKVKAARAGT 454
+ +RN+ T F +LK + GT
Sbjct: 117 KRQRNKLLTIAFNTLKKRTKADGT 140
>AE014296-1484|AAF50393.1| 166|Drosophila melanogaster CG6253-PA
protein.
Length = 166
Score = 91.5 bits (217), Expect = 9e-19
Identities = 39/55 (70%), Positives = 49/55 (89%)
Frame = +3
Query: 90 GPLKGKLVSVVDVIDQTRALVDGPGSGVPRQQIRLNQLHLTKFRLKYAFTAPTRL 254
GPLKG+LV++VDVIDQ R LVDGP +GVPRQ+ RLN LHLTK+R+K+ +TAPTR+
Sbjct: 18 GPLKGRLVAIVDVIDQNRVLVDGPLTGVPRQEYRLNNLHLTKYRIKFPYTAPTRI 72
Score = 70.5 bits (165), Expect = 2e-12
Identities = 47/145 (32%), Positives = 71/145 (48%), Gaps = 6/145 (4%)
Frame = +2
Query: 38 MPFARYVEPGRVALVSRRSLKGK------VSERGRRY*PNSCTG*WTRQWST*ATDPLKP 199
MPF R+V+ GR+A S LKG+ V ++ R TG +++ L
Sbjct: 1 MPFERFVQTGRIAKASAGPLKGRLVAIVDVIDQNRVLVDGPLTGVPRQEYR------LNN 54
Query: 200 TPSHKIPPQIRVHSPYSSLRKAWTDAKLNEKWTESQWAQKLANKEKRAQMTDYDRFKLTA 379
K + +P +RKAWT++ L +W S W+ K N KR+ + D+DRFKL
Sbjct: 55 LHLTKYRIKFPYTAPTRIVRKAWTESDLKAQWKVSPWSVKAQNICKRSSLNDFDRFKLRY 114
Query: 380 ARVKRNRARTAVFKSLKVKAARAGT 454
A+ +RN+ T F +LK + GT
Sbjct: 115 AKRQRNKLLTIAFNTLKKRTKADGT 139
>AE014134-600|AAF51111.1| 181|Drosophila melanogaster CG31952-PA
protein.
Length = 181
Score = 28.7 bits (61), Expect = 7.0
Identities = 15/50 (30%), Positives = 26/50 (52%)
Frame = +2
Query: 299 ESQWAQKLANKEKRAQMTDYDRFKLTAARVKRNRARTAVFKSLKVKAARA 448
+S + +A +EK A ++ + K TAA A T+ +++ KAA A
Sbjct: 72 QSASSAAIAAREKAANAAEFTKEKATAAAAAATEAATSAASTVREKAAAA 121
>AY095074-1|AAM11402.1| 397|Drosophila melanogaster RE21802p
protein.
Length = 397
Score = 28.3 bits (60), Expect = 9.2
Identities = 21/61 (34%), Positives = 28/61 (45%)
Frame = -2
Query: 190 RICCLGTPLPGPSTSARVWSITSTTLTNFPFKGPSADQGDTPWFYVPCKRHDVLTTS*HK 11
RI +G P G ST V + ++ NFPF ++ P VP +R D L HK
Sbjct: 23 RIGIVGVPNVGKSTFFNVLTQSAAPAENFPFCTIKPNESRVP---VPDERFDYLVEY-HK 78
Query: 10 P 8
P
Sbjct: 79 P 79
>AJ001164-1|CAA04568.1| 1668|Drosophila melanogaster Additional sex
combs protein.
Length = 1668
Score = 28.3 bits (60), Expect = 9.2
Identities = 12/39 (30%), Positives = 17/39 (43%)
Frame = -2
Query: 412 GSPGTVPLNSCSC*LEPIVICHLCALLFVR*LLGPLTFC 296
G+ T N+C+C L +VIC C +G C
Sbjct: 1624 GNEATATANNCACSLNAMVICQQCGAFCHDDCIGAAKLC 1662
>AE014298-1368|AAN09614.1| 397|Drosophila melanogaster CG1354-PD,
isoform D protein.
Length = 397
Score = 28.3 bits (60), Expect = 9.2
Identities = 21/61 (34%), Positives = 28/61 (45%)
Frame = -2
Query: 190 RICCLGTPLPGPSTSARVWSITSTTLTNFPFKGPSADQGDTPWFYVPCKRHDVLTTS*HK 11
RI +G P G ST V + ++ NFPF ++ P VP +R D L HK
Sbjct: 23 RIGIVGVPNVGKSTFFNVLTQSAAPAENFPFCTIKPNESRVP---VPDERFDYLVEY-HK 78
Query: 10 P 8
P
Sbjct: 79 P 79
>AE014298-1367|AAN09613.1| 397|Drosophila melanogaster CG1354-PC,
isoform C protein.
Length = 397
Score = 28.3 bits (60), Expect = 9.2
Identities = 21/61 (34%), Positives = 28/61 (45%)
Frame = -2
Query: 190 RICCLGTPLPGPSTSARVWSITSTTLTNFPFKGPSADQGDTPWFYVPCKRHDVLTTS*HK 11
RI +G P G ST V + ++ NFPF ++ P VP +R D L HK
Sbjct: 23 RIGIVGVPNVGKSTFFNVLTQSAAPAENFPFCTIKPNESRVP---VPDERFDYLVEY-HK 78
Query: 10 P 8
P
Sbjct: 79 P 79
>AE014298-1366|AAF46520.2| 397|Drosophila melanogaster CG1354-PA,
isoform A protein.
Length = 397
Score = 28.3 bits (60), Expect = 9.2
Identities = 21/61 (34%), Positives = 28/61 (45%)
Frame = -2
Query: 190 RICCLGTPLPGPSTSARVWSITSTTLTNFPFKGPSADQGDTPWFYVPCKRHDVLTTS*HK 11
RI +G P G ST V + ++ NFPF ++ P VP +R D L HK
Sbjct: 23 RIGIVGVPNVGKSTFFNVLTQSAAPAENFPFCTIKPNESRVP---VPDERFDYLVEY-HK 78
Query: 10 P 8
P
Sbjct: 79 P 79
>AE013599-1902|AAF58239.1| 1669|Drosophila melanogaster CG8787-PA,
isoform A protein.
Length = 1669
Score = 28.3 bits (60), Expect = 9.2
Identities = 12/39 (30%), Positives = 17/39 (43%)
Frame = -2
Query: 412 GSPGTVPLNSCSC*LEPIVICHLCALLFVR*LLGPLTFC 296
G+ T N+C+C L +VIC C +G C
Sbjct: 1625 GNEATATANNCACSLNAMVICQQCGAFCHDDCIGAAKLC 1663
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 25,354,582
Number of Sequences: 53049
Number of extensions: 534785
Number of successful extensions: 1627
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 1575
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1627
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2662347150
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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