Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= prgv0306
         (691 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY344833-1|AAR05804.1|  334|Anopheles gambiae ICHIT protein.           24   3.9  
AY344829-1|AAR05800.1|  334|Anopheles gambiae ICHIT protein.           24   3.9  
EF519382-1|ABP68491.1|  493|Anopheles gambiae LRIM1 protein.           23   6.9  
EF519368-1|ABP68477.1|  506|Anopheles gambiae LRIM1 protein.           23   6.9  

>AY344833-1|AAR05804.1|  334|Anopheles gambiae ICHIT protein.
          Length = 334

 Score = 24.2 bits (50), Expect = 3.9
 Identities = 12/27 (44%), Positives = 13/27 (48%)
 Frame = -2

Query: 432 TVTTTGSSSRAPWATPTPRGWTRSSGT 352
           T TTT S    P  T T   WT S+ T
Sbjct: 169 TTTTTWSDQPPPPTTTTTTVWTDSTAT 195


>AY344829-1|AAR05800.1|  334|Anopheles gambiae ICHIT protein.
          Length = 334

 Score = 24.2 bits (50), Expect = 3.9
 Identities = 12/27 (44%), Positives = 13/27 (48%)
 Frame = -2

Query: 432 TVTTTGSSSRAPWATPTPRGWTRSSGT 352
           T TTT S    P  T T   WT S+ T
Sbjct: 169 TTTTTWSDQPRPPTTTTTTVWTDSTAT 195


>EF519382-1|ABP68491.1|  493|Anopheles gambiae LRIM1 protein.
          Length = 493

 Score = 23.4 bits (48), Expect = 6.9
 Identities = 7/15 (46%), Positives = 9/15 (60%)
 Frame = -1

Query: 337 PQHAYWLSYCCRSLP 293
           P H ++  YCC  LP
Sbjct: 308 PMHNHYGPYCCEDLP 322


>EF519368-1|ABP68477.1|  506|Anopheles gambiae LRIM1 protein.
          Length = 506

 Score = 23.4 bits (48), Expect = 6.9
 Identities = 7/15 (46%), Positives = 9/15 (60%)
 Frame = -1

Query: 337 PQHAYWLSYCCRSLP 293
           P H ++  YCC  LP
Sbjct: 308 PMHNHYGPYCCEDLP 322


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 557,972
Number of Sequences: 2352
Number of extensions: 9599
Number of successful extensions: 67
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 67
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 67
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 69831885
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)