Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= prgv0305
         (648 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q4YVC1 Cluster: Putative uncharacterized protein; n=4; ...    33   7.9  
UniRef50_Q04956 Cluster: Probable cation-transporting ATPase 1; ...    33   7.9  

>UniRef50_Q4YVC1 Cluster: Putative uncharacterized protein; n=4;
           Plasmodium (Vinckeia)|Rep: Putative uncharacterized
           protein - Plasmodium berghei
          Length = 738

 Score = 32.7 bits (71), Expect = 7.9
 Identities = 31/82 (37%), Positives = 41/82 (50%), Gaps = 4/82 (4%)
 Frame = +1

Query: 163 KNAMNIL*KSHILFKYICFAAPV--NRIIEHVFYC*LN--IYFRSASLSVSNYKKN*SVR 330
           K+A  +L    I+F   CF  PV   R+I  VF    N  I+F    LS +  KKN  V 
Sbjct: 328 KDACIVLSYYIIVFFNSCFLNPVFDERLINTVFNFDKNDNIWFNFIFLSSTKMKKNKDVI 387

Query: 331 LL*KYIIENILFTKFLLINKNY 396
           +L K+ I ++     LL NKNY
Sbjct: 388 ILVKFSILHLYL--LLLKNKNY 407


>UniRef50_Q04956 Cluster: Probable cation-transporting ATPase 1; n=3;
            Plasmodium|Rep: Probable cation-transporting ATPase 1 -
            Plasmodium falciparum
          Length = 1956

 Score = 32.7 bits (71), Expect = 7.9
 Identities = 17/62 (27%), Positives = 31/62 (50%)
 Frame = -2

Query: 377  KNLVNNIFSMIYFHNNLTD*FFL*LDTESDALRK*IFN*Q*KTCSMILFTGAAKQMYLNK 198
            KN++NN  S +Y+H N+ D F   ++ E     K ++  Q K    ++     K+ Y+N 
Sbjct: 1292 KNIINNHNSNLYYHYNIIDTFVKRMNKEYMCFNKLLYKIQQKLLYNLIHNLYKKKKYMNN 1351

Query: 197  IW 192
             +
Sbjct: 1352 YY 1353


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 504,357,761
Number of Sequences: 1657284
Number of extensions: 9251883
Number of successful extensions: 15914
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 15189
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15912
length of database: 575,637,011
effective HSP length: 97
effective length of database: 414,880,463
effective search space used: 48955894634
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)