Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= prgv0305
         (648 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292341-1|CAL23153.2|  393|Tribolium castaneum gustatory recept...    22   3.8  
AM292358-1|CAL23170.2|  331|Tribolium castaneum gustatory recept...    21   6.6  
AM292353-1|CAL23165.2|  651|Tribolium castaneum gustatory recept...    21   6.6  
AM292357-1|CAL23169.2|  355|Tribolium castaneum gustatory recept...    21   8.7  

>AM292341-1|CAL23153.2|  393|Tribolium castaneum gustatory receptor
           candidate 20 protein.
          Length = 393

 Score = 22.2 bits (45), Expect = 3.8
 Identities = 8/17 (47%), Positives = 11/17 (64%)
 Frame = +3

Query: 222 CSCEQNHRTCLLLLIKY 272
           CS ++  +TCL L I Y
Sbjct: 31  CSSQKGQKTCLNLSINY 47


>AM292358-1|CAL23170.2|  331|Tribolium castaneum gustatory receptor
           candidate 37 protein.
          Length = 331

 Score = 21.4 bits (43), Expect = 6.6
 Identities = 7/21 (33%), Positives = 14/21 (66%)
 Frame = +3

Query: 390 KLYNNIITILITHIFLDFNYT 452
           +++N I+T LI  +  + NY+
Sbjct: 309 RMFNAIVTFLIVMVQFETNYS 329


>AM292353-1|CAL23165.2|  651|Tribolium castaneum gustatory receptor
           candidate 32 protein.
          Length = 651

 Score = 21.4 bits (43), Expect = 6.6
 Identities = 7/21 (33%), Positives = 14/21 (66%)
 Frame = +3

Query: 390 KLYNNIITILITHIFLDFNYT 452
           +++N I+T LI  +  + NY+
Sbjct: 629 RMFNAIVTFLIVMVQFETNYS 649


>AM292357-1|CAL23169.2|  355|Tribolium castaneum gustatory receptor
           candidate 36 protein.
          Length = 355

 Score = 21.0 bits (42), Expect = 8.7
 Identities = 7/14 (50%), Positives = 10/14 (71%)
 Frame = -1

Query: 156 MKIETDCRRISDLF 115
           +KIET CR +  L+
Sbjct: 197 LKIETSCRYVGTLY 210


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 135,796
Number of Sequences: 336
Number of extensions: 2995
Number of successful extensions: 4
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 16656800
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)