Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= prgv0304
         (686 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AK127397-1|BAC86958.1|  130|Homo sapiens protein ( Homo sapiens ...    32   2.2  
AK128694-1|BAC87575.1|  291|Homo sapiens protein ( Homo sapiens ...    31   3.8  

>AK127397-1|BAC86958.1|  130|Homo sapiens protein ( Homo sapiens
           cDNA FLJ45488 fis, clone BRTHA2003759. ).
          Length = 130

 Score = 31.9 bits (69), Expect = 2.2
 Identities = 11/43 (25%), Positives = 28/43 (65%)
 Frame = +2

Query: 554 IFVSHCIIIFRLIKLYVYFHLWILKIESMHGHMFILETGKFIK 682
           IF+  CI ++  I +++Y ++++  ++++HG++ +  T K  K
Sbjct: 83  IFIYICICLYIFIYVFIYINIYMRGLQNIHGNIELKATNKKYK 125


>AK128694-1|BAC87575.1|  291|Homo sapiens protein ( Homo sapiens
           cDNA FLJ46861 fis, clone UTERU3011092. ).
          Length = 291

 Score = 31.1 bits (67), Expect = 3.8
 Identities = 9/21 (42%), Positives = 16/21 (76%)
 Frame = +3

Query: 597 YTYIFICGY*KLNLCMGICLY 659
           YTY++IC Y  + +C+ +C+Y
Sbjct: 201 YTYVYICVYIHIYICIHVCVY 221


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 87,102,032
Number of Sequences: 237096
Number of extensions: 1549901
Number of successful extensions: 2753
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 2573
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2742
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 7839245960
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)