Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= prgv0303
(674 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q6XYE8 Cluster: Cytochrome c oxidase subunit I; n=2; En... 142 5e-33
UniRef50_Q5GGF4 Cluster: Cytochrome c oxidase subunit I; n=2742;... 122 6e-27
UniRef50_Q4FH11 Cluster: Cytochrome c oxidase subunit I; n=26; B... 121 2e-26
UniRef50_Q9MIY8 Cluster: Cytochrome c oxidase subunit 1; n=861; ... 120 3e-26
UniRef50_P00395 Cluster: Cytochrome c oxidase subunit 1; n=44498... 119 6e-26
UniRef50_Q6ZLV6 Cluster: Cytochrome c oxidase subunit I; n=941; ... 119 7e-26
UniRef50_Q85HI4 Cluster: Cytochrome c oxidase subunit I; n=7; Ec... 116 4e-25
UniRef50_P60620 Cluster: Cytochrome c oxidase subunit 1; n=2931;... 111 2e-23
UniRef50_Q30DC3 Cluster: Cytochrome c oxidase subunit I; n=30; P... 109 8e-23
UniRef50_P48866 Cluster: Cytochrome c oxidase subunit 1; n=179; ... 105 1e-21
UniRef50_Q0H8Y3 Cluster: Probable intron-encoded endonuclease aI... 104 2e-21
UniRef50_Q9MCX7 Cluster: Cytochrome c oxidase subunit I; n=181; ... 103 5e-21
UniRef50_Q28SZ5 Cluster: Cytochrome-c oxidase; n=50; cellular or... 102 7e-21
UniRef50_Q9G8S1 Cluster: Cytochrome c oxidase subunit 1; n=1; Na... 101 2e-20
UniRef50_A7UG06 Cluster: Cytochrome oxidase subunits 1 and 2 pol... 99 1e-19
UniRef50_Q9ZZX1 Cluster: Intron-encoded DNA endonuclease aI5 alp... 98 1e-19
UniRef50_Q7YEU6 Cluster: Endonuclease; n=4; Fungi/Metazoa group|... 97 3e-19
UniRef50_Q1XA94 Cluster: Cytochrome c oxidase subunit I; n=825; ... 97 3e-19
UniRef50_Q1NET5 Cluster: Cytochrome-c oxidase; n=3; Alphaproteob... 96 6e-19
UniRef50_Q9B8X8 Cluster: Cytochrome c oxidase subunit I; n=517; ... 94 2e-18
UniRef50_Q5W914 Cluster: Cytochrome c oxidase subunit I; n=9; Co... 94 3e-18
UniRef50_Q9MLW1 Cluster: Cytochrome c oxidase subunit I; n=5; Na... 90 4e-17
UniRef50_Q58PB7 Cluster: Cytochrome c oxidase subunit I; n=106; ... 89 9e-17
UniRef50_A6XEV4 Cluster: Cytochrome c oxidase subunit 1; n=1; Mu... 88 2e-16
UniRef50_Q8SK39 Cluster: Cytochrome c oxidase subunit I; n=455; ... 88 2e-16
UniRef50_A2T435 Cluster: Cytochrome c oxidase subunit I; n=126; ... 87 3e-16
UniRef50_Q6ED53 Cluster: Cox1-i5 protein; n=2; Candida stellata|... 87 3e-16
UniRef50_Q6ED52 Cluster: Cox1-i4 protein; n=1; Candida stellata|... 87 3e-16
UniRef50_Q0H8Y1 Cluster: Probable intron-encoded endonuclease aI... 87 3e-16
UniRef50_Q02766 Cluster: Cytochrome c oxidase subunit 1; n=107; ... 87 4e-16
UniRef50_Q8SHP5 Cluster: Cytochrome c oxidase subunit I; n=15; F... 85 1e-15
UniRef50_Q06473 Cluster: Cytochrome c oxidase subunit 1 (EC 1.9.... 82 1e-14
UniRef50_P03878 Cluster: Intron-encoded DNA endonuclease aI4 pre... 80 4e-14
UniRef50_O47573 Cluster: Cytochrome c oxidase subunit I; n=42; N... 79 7e-14
UniRef50_P14544 Cluster: Cytochrome c oxidase subunit 1; n=7; Eu... 79 1e-13
UniRef50_P33518 Cluster: Cytochrome c oxidase polypeptide 1; n=4... 77 3e-13
UniRef50_Q6ED51 Cluster: Cox-i3 protein; n=1; Candida stellata|R... 77 4e-13
UniRef50_Q6ED50 Cluster: Cox-i2 protein; n=1; Candida stellata|R... 77 4e-13
UniRef50_A5UVJ0 Cluster: Cytochrome-c oxidase; n=2; Roseiflexus|... 75 1e-12
UniRef50_P29649 Cluster: Cytochrome c oxidase subunit 1; n=441; ... 75 1e-12
UniRef50_A6C5X9 Cluster: Cytochrome caa3 oxidase; n=3; Bacteria|... 75 2e-12
UniRef50_Q8M352 Cluster: I-SceII DNA endonuclease-like protein; ... 75 2e-12
UniRef50_Q36097 Cluster: Cytochrome c oxidase subunit 1; n=3; Th... 75 2e-12
UniRef50_Q0I8U1 Cluster: Cytochrome c oxidase subunit I; n=16; B... 74 3e-12
UniRef50_Q6RJT8 Cluster: Cytochrome c oxidase subunit 2; n=1; Ha... 74 4e-12
UniRef50_P24010 Cluster: Cytochrome c oxidase subunit 1 (EC 1.9.... 73 5e-12
UniRef50_P98000 Cluster: Alternative cytochrome c oxidase subuni... 73 6e-12
UniRef50_Q9XKD7 Cluster: Cytochrome c oxidase subunit I; n=1; Di... 73 8e-12
UniRef50_Q34463 Cluster: Cytochrome oxidase subunit I; n=3; Eugl... 72 1e-11
UniRef50_Q0H8Y0 Cluster: Probable intron-encoded endonuclease aI... 72 1e-11
UniRef50_Q18JR5 Cluster: Cytochrome-c-like terminal oxidase, sub... 72 1e-11
UniRef50_Q1CZF1 Cluster: Cytochrome c oxidase, subunit I; n=1; M... 71 2e-11
UniRef50_P11947 Cluster: Cytochrome c oxidase subunit 1; n=48; O... 71 3e-11
UniRef50_Q67ML1 Cluster: Cytochrome C oxidase subunit I; n=17; B... 70 5e-11
UniRef50_Q98P35 Cluster: Cytochrome C oxidase subunit I; n=16; c... 69 8e-11
UniRef50_Q8ZXD1 Cluster: Cytochrome C oxidase subunit I /III; n=... 69 1e-10
UniRef50_A7H8L4 Cluster: Cytochrome c oxidase subunit I type; n=... 69 1e-10
UniRef50_A6BM65 Cluster: Cytochrome oxidase subunit I; n=1; Peri... 68 2e-10
UniRef50_A1ZL77 Cluster: Alternative Cytochrome c oxidase polype... 66 6e-10
UniRef50_Q6TP93 Cluster: Cytochrome c oxidase subunit I; n=2; Br... 66 6e-10
UniRef50_Q79VD7 Cluster: Cytochrome c oxidase subunit 1; n=93; A... 66 6e-10
UniRef50_O67935 Cluster: Cytochrome c oxidase subunit I; n=1; Aq... 66 1e-09
UniRef50_P39481 Cluster: Quinol oxidase subunit 1/3; n=5; Sulfol... 66 1e-09
UniRef50_Q1IUK7 Cluster: Cytochrome-c oxidase; n=2; Acidobacteri... 65 1e-09
UniRef50_P34956 Cluster: Quinol oxidase subunit 1 (EC 1.10.3.-) ... 65 1e-09
UniRef50_P98005 Cluster: Cytochrome c oxidase polypeptide I+III ... 65 1e-09
UniRef50_A0VUI8 Cluster: Cytochrome-c oxidase; n=1; Dinoroseobac... 65 2e-09
UniRef50_Q9B6E6 Cluster: COX1-i5 protein; n=3; Fungi/Metazoa gro... 65 2e-09
UniRef50_A3ZTG1 Cluster: Cytochrome c oxidase subunit I; n=1; Bl... 64 3e-09
UniRef50_Q11EK8 Cluster: Cytochrome c oxidase, subunit I; n=5; P... 64 4e-09
UniRef50_Q9YDX6 Cluster: Heme-copper oxidase subunit I+III; n=1;... 64 4e-09
UniRef50_Q1H1C1 Cluster: Cytochrome-c oxidase; n=1; Methylobacil... 63 5e-09
UniRef50_Q7NQZ0 Cluster: Cytochrome o ubiquinol oxidase, subunit... 63 7e-09
UniRef50_A7HEB5 Cluster: Cytochrome-c oxidase; n=2; Cystobacteri... 63 7e-09
UniRef50_A0RZ19 Cluster: Heme/copper-type cytochrome/quinol oxid... 62 1e-08
UniRef50_Q5P1W4 Cluster: Cytochrome c oxidase, subunit I; n=13; ... 62 2e-08
UniRef50_Q9Z605 Cluster: Quinol oxidase subunit I; n=15; Proteob... 62 2e-08
UniRef50_A6C0L1 Cluster: Cytochrome c oxidase subunit I; n=1; Pl... 62 2e-08
UniRef50_Q9WWR2 Cluster: Ubiquinol oxidase subunit 1 (EC 1.10.3.... 62 2e-08
UniRef50_A4WT83 Cluster: Cytochrome c, monohaem; n=3; Rhodobacte... 61 2e-08
UniRef50_Q05FH1 Cluster: Cytochrome O ubiquinol oxidase subunit ... 60 5e-08
UniRef50_A3SJL2 Cluster: QoxA, Quinol oxidase subunit I; n=2; Rh... 60 5e-08
UniRef50_Q0AI64 Cluster: Cytochrome-c oxidase; n=3; Proteobacter... 59 1e-07
UniRef50_A0TRU9 Cluster: Cytochrome-c oxidase; n=30; Proteobacte... 59 1e-07
UniRef50_Q9RR77 Cluster: Cytochrome c oxidase, subunit I; n=2; D... 58 1e-07
UniRef50_A5FXH8 Cluster: Cytochrome-c oxidase; n=1; Acidiphilium... 56 6e-07
UniRef50_Q8HCX2 Cluster: Cytochrome c oxidase subunit I; n=1; Ap... 56 1e-06
UniRef50_Q9TCV5 Cluster: Cytochrome c oxidase subunit I; n=6; Di... 54 3e-06
UniRef50_A7BSH8 Cluster: Cytochrome c oxidase aa3, subunit 1; n=... 52 1e-05
UniRef50_Q5V018 Cluster: Cytochrome c oxidase subunit I; n=3; Ha... 51 3e-05
UniRef50_Q9MFX8 Cluster: Cytochrome oxidase I; n=5; Echinometra ... 48 3e-04
UniRef50_Q2N1P8 Cluster: Cytochrome c oxidase subunit I; n=2; Eu... 47 5e-04
UniRef50_A1XI88 Cluster: Cytochrome c oxidase subunit I; n=1; My... 47 5e-04
UniRef50_O99652 Cluster: Cytochrome c oxidase subunit I; n=1; Te... 45 0.002
UniRef50_Q6KZG3 Cluster: Cytochrome c oxidase polypeptide I/III;... 44 0.003
UniRef50_Q8LX74 Cluster: Cytochrome c oxidase subunit I; n=1; Ch... 39 0.13
UniRef50_Q8LX70 Cluster: Cytochrome c oxidase subunit I; n=4; Ch... 38 0.17
UniRef50_Q7YI87 Cluster: Cytochrome oxidase subunit I; n=1; Cela... 38 0.29
UniRef50_O86945 Cluster: Sub-unit I of an aa3-type cytochrome ox... 37 0.51
UniRef50_Q3L2S5 Cluster: Cytochrome c oxidase subunit I; n=1; Ae... 37 0.51
UniRef50_Q9XLV8 Cluster: Cytochrome c oxidase subunit I; n=1; Di... 36 0.68
UniRef50_Q8LX82 Cluster: Cytochrome c oxidase subunit I; n=3; Ch... 36 0.68
UniRef50_O67937 Cluster: Cytochrome c oxidase subunit I; n=1; Aq... 35 2.1
UniRef50_A5URU0 Cluster: Cytochrome c oxidase, subunit I; n=4; C... 34 3.6
UniRef50_Q59IQ0 Cluster: Cytochrome c oxidase subunit I; n=1; Wa... 33 6.3
UniRef50_Q5CTJ9 Cluster: Cation-transporting ATPase; n=2; Crypto... 33 8.4
>UniRef50_Q6XYE8 Cluster: Cytochrome c oxidase subunit I; n=2;
Endopterygota|Rep: Cytochrome c oxidase subunit I -
Copitarsia incommoda
Length = 150
Score = 142 bits (345), Expect = 5e-33
Identities = 69/116 (59%), Positives = 75/116 (64%)
Frame = +2
Query: 278 SCWRRRPNFISTFILIFWTS*SLYFNFTRIWYNFSYYFTRKRKKRNFWLFRNNLCYTSNW 457
S W F+STFILIFWT SLYFNFT IWYNFSYYF K KK N W+F +NLCY SNW
Sbjct: 15 SSWSSWSYFMSTFILIFWTPSSLYFNFTSIWYNFSYYFPSKSKKGNLWVFSDNLCYISNW 74
Query: 458 VIRIYCLSSSYIHCRYRIGTRAYFTSATRIYWLYQQELKFLG*LATIHGTQIN*KP 625
+I IYCLSSSYI+ YFTSAT I +K LAT HGTQIN P
Sbjct: 75 IISIYCLSSSYIYSSNSYWYSTYFTSATMII-AVPTGIKIFSWLATFHGTQINYSP 129
>UniRef50_Q5GGF4 Cluster: Cytochrome c oxidase subunit I; n=2742;
Bilateria|Rep: Cytochrome c oxidase subunit I - Cotesia
melitaearum (Parasitoid wasp)
Length = 499
Score = 122 bits (295), Expect = 6e-27
Identities = 56/91 (61%), Positives = 66/91 (72%)
Frame = +3
Query: 240 IINRSNLXTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIISXERGKKETF 419
++ N+ TSFFDP+GGGDPILYQHLF FFGHPEVYILILPGFGIISH+I E GKKETF
Sbjct: 193 LLTDRNMNTSFFDPSGGGDPILYQHLFWFFGHPEVYILILPGFGIISHMIFNESGKKETF 252
Query: 420 XXXXXXXXXXXXXXXXFIV*AHHIFTVGIEL 512
FIV AHH+FT+G+++
Sbjct: 253 GMLGMIYAMLTIGFLGFIVWAHHMFTIGMDV 283
Score = 81.8 bits (193), Expect = 1e-14
Identities = 46/85 (54%), Positives = 52/85 (61%)
Frame = +1
Query: 1 YPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AV 180
YPPLS + H G SVDL IFSLHLAG SS + D++ LF +V
Sbjct: 113 YPPLSLILGHGGMSVDLGIFSLHLAGASSIMGAVNFITTILNMRSNLFNMDKMSLFSWSV 172
Query: 181 GITAFLLXLSLPVLAGAITILLTDR 255
ITA LL LSLPVLAGAIT+LLTDR
Sbjct: 173 FITAILLLLSLPVLAGAITMLLTDR 197
>UniRef50_Q4FH11 Cluster: Cytochrome c oxidase subunit I; n=26;
Bilateria|Rep: Cytochrome c oxidase subunit I - Samia
cynthia ricini (Indian eri silkmoth)
Length = 510
Score = 121 bits (291), Expect = 2e-26
Identities = 80/164 (48%), Positives = 84/164 (51%)
Frame = +1
Query: 1 YPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AV 180
YPPLSSNIAH G SVDLAIFSLHLAGISS SFDQ+PLFV AV
Sbjct: 126 YPPLSSNIAHGGSSVDLAIFSLHLAGISSILGAINFITTIINMRMNNLSFDQMPLFVWAV 185
Query: 181 GITAFLLXLSLPVLAGAITILLTDRTXIHHFLILLEEETQFYINIXXXXXXXXXXXXXXX 360
GITAFLL LSLPVLAGAIT+LLTDR F
Sbjct: 186 GITAFLLLLSLPVLAGAITMLLTDRNLNTSFFDPAGGGDPILYQHLFWFFGHPKLMFSFS 245
Query: 361 QDLV*FLILFHXXXXXXXXXXXXXXFMLY*QLGY*DLLFELIIY 492
QDLV F +LF FM L Y DLLFELI+Y
Sbjct: 246 QDLVSFHMLFPKKVEKSKLLVVSVSFMQSWLLVYSDLLFELIMY 289
>UniRef50_Q9MIY8 Cluster: Cytochrome c oxidase subunit 1; n=861;
root|Rep: Cytochrome c oxidase subunit 1 - Danio rerio
(Zebrafish) (Brachydanio rerio)
Length = 516
Score = 120 bits (289), Expect = 3e-26
Identities = 55/91 (60%), Positives = 65/91 (71%)
Frame = +3
Query: 240 IINRSNLXTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIISXERGKKETF 419
++ NL T+FFDPAGGGDPILYQHLF FFGHPEVYILILPGFGIISH+++ GKKE F
Sbjct: 209 LLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGIISHVVAYYAGKKEPF 268
Query: 420 XXXXXXXXXXXXXXXXFIV*AHHIFTVGIEL 512
FIV AHH+FTVG+++
Sbjct: 269 GYMGMVWAMMAIGLLGFIVWAHHMFTVGMDV 299
Score = 87.0 bits (206), Expect = 4e-16
Identities = 48/85 (56%), Positives = 53/85 (62%)
Frame = +1
Query: 1 YPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AV 180
YPPL+ N+AH G SVDL IFSLHLAG+SS S Q PLFV AV
Sbjct: 129 YPPLAGNLAHAGASVDLTIFSLHLAGVSSILGAINFITTTINMKPPTISQYQTPLFVWAV 188
Query: 181 GITAFLLXLSLPVLAGAITILLTDR 255
+TA LL LSLPVLA IT+LLTDR
Sbjct: 189 LVTAVLLLLSLPVLAAGITMLLTDR 213
>UniRef50_P00395 Cluster: Cytochrome c oxidase subunit 1; n=44498;
root|Rep: Cytochrome c oxidase subunit 1 - Homo sapiens
(Human)
Length = 513
Score = 119 bits (287), Expect = 6e-26
Identities = 55/91 (60%), Positives = 65/91 (71%)
Frame = +3
Query: 240 IINRSNLXTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIISXERGKKETF 419
++ NL T+FFDPAGGGDPILYQHLF FFGHPEVYILILPGFG+ISHI++ GKKE F
Sbjct: 209 LLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGMISHIVTYYSGKKEPF 268
Query: 420 XXXXXXXXXXXXXXXXFIV*AHHIFTVGIEL 512
FIV AHH+FTVG+++
Sbjct: 269 GYMGMVWAMMSIGFLGFIVWAHHMFTVGMDV 299
Score = 82.2 bits (194), Expect = 1e-14
Identities = 46/85 (54%), Positives = 52/85 (61%)
Frame = +1
Query: 1 YPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AV 180
YPPL+ N +H G SVDL IFSLHLAG+SS + Q PLFV +V
Sbjct: 129 YPPLAGNYSHPGASVDLTIFSLHLAGVSSILGAINFITTIINMKPPAMTQYQTPLFVWSV 188
Query: 181 GITAFLLXLSLPVLAGAITILLTDR 255
ITA LL LSLPVLA IT+LLTDR
Sbjct: 189 LITAVLLLLSLPVLAAGITMLLTDR 213
>UniRef50_Q6ZLV6 Cluster: Cytochrome c oxidase subunit I; n=941;
Eukaryota|Rep: Cytochrome c oxidase subunit I -
Ophisurus macrorhynchos
Length = 546
Score = 119 bits (286), Expect = 7e-26
Identities = 54/91 (59%), Positives = 65/91 (71%)
Frame = +3
Query: 240 IINRSNLXTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIISXERGKKETF 419
++ NL T+FFDPAGGGDPILYQHLF FFGHPEVYILILPGFG+ISH+++ GKKE F
Sbjct: 209 LLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGMISHVVTYYAGKKEPF 268
Query: 420 XXXXXXXXXXXXXXXXFIV*AHHIFTVGIEL 512
FIV AHH+FTVG+++
Sbjct: 269 GYMGMVWAMMAIGLLGFIVWAHHMFTVGMDV 299
Score = 84.6 bits (200), Expect = 2e-15
Identities = 46/85 (54%), Positives = 53/85 (62%)
Frame = +1
Query: 1 YPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AV 180
YPPL+ N+AH G SVDL IFSLHLAG+SS + Q PLFV +V
Sbjct: 129 YPPLAGNLAHAGASVDLTIFSLHLAGVSSILGAINFITTIINMKPPAITQYQTPLFVWSV 188
Query: 181 GITAFLLXLSLPVLAGAITILLTDR 255
+TA LL LSLPVLA IT+LLTDR
Sbjct: 189 LVTAVLLLLSLPVLAAGITMLLTDR 213
>UniRef50_Q85HI4 Cluster: Cytochrome c oxidase subunit I; n=7;
Echinoida|Rep: Cytochrome c oxidase subunit I -
Echinometra oblonga
Length = 386
Score = 116 bits (280), Expect = 4e-25
Identities = 54/101 (53%), Positives = 67/101 (66%)
Frame = +3
Query: 210 TTCFSWSYYNIINRSNLXTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHII 389
++ SW N SN T+FFDPAGGGD IL+QHLF FFGHPEVYILILPGFG+ISH+I
Sbjct: 176 SSSISWGNNNASYSSNYYTTFFDPAGGGDXILFQHLFXFFGHPEVYILILPGFGMISHVI 235
Query: 390 SXERGKKETFXXXXXXXXXXXXXXXXFIV*AHHIFTVGIEL 512
+ GK+E F F+V AHH+FTVG+++
Sbjct: 236 AHYSGKREPFGYLGMVYAMIAIGVLGFLVWAHHMFTVGMDV 276
>UniRef50_P60620 Cluster: Cytochrome c oxidase subunit 1; n=2931;
cellular organisms|Rep: Cytochrome c oxidase subunit 1 -
Arabidopsis thaliana (Mouse-ear cress)
Length = 527
Score = 111 bits (266), Expect = 2e-23
Identities = 53/91 (58%), Positives = 62/91 (68%)
Frame = +3
Query: 240 IINRSNLXTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIISXERGKKETF 419
++ N T+FFDPAGGGDPILYQHLF FFGHPEVYILILPGFGIISHI+S G K F
Sbjct: 212 LLTDRNFNTTFFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGIISHIVSTFSG-KPVF 270
Query: 420 XXXXXXXXXXXXXXXXFIV*AHHIFTVGIEL 512
F+V AHH+FTVG+++
Sbjct: 271 GYLGMVYAMISIGVLGFLVWAHHMFTVGLDV 301
Score = 87.8 bits (208), Expect = 2e-16
Identities = 47/85 (55%), Positives = 56/85 (65%)
Frame = +1
Query: 1 YPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AV 180
YPPLS +H G +VDLAIFSLHL+G+SS + +LPLFV +V
Sbjct: 132 YPPLSGITSHSGGAVDLAIFSLHLSGVSSILGSINFITTIFNMRGPGMTMHRLPLFVWSV 191
Query: 181 GITAFLLXLSLPVLAGAITILLTDR 255
+TAFLL LSLPVLAGAIT+LLTDR
Sbjct: 192 LVTAFLLLLSLPVLAGAITMLLTDR 216
>UniRef50_Q30DC3 Cluster: Cytochrome c oxidase subunit I; n=30;
Panarthropoda|Rep: Cytochrome c oxidase subunit I -
Pagyris cymothoe
Length = 487
Score = 109 bits (261), Expect = 8e-23
Identities = 58/85 (68%), Positives = 61/85 (71%)
Frame = +1
Query: 1 YPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AV 180
YPPLSSNIAH G SVDLAIFSLHLAGISS SFDQ+PLF+ AV
Sbjct: 102 YPPLSSNIAHGGSSVDLAIFSLHLAGISSILGAINFITTIINMRINKMSFDQMPLFIWAV 161
Query: 181 GITAFLLXLSLPVLAGAITILLTDR 255
GITA LL LSLPVLAGAIT+LLTDR
Sbjct: 162 GITALLLLLSLPVLAGAITMLLTDR 186
Score = 74.1 bits (174), Expect = 3e-12
Identities = 32/39 (82%), Positives = 34/39 (87%)
Frame = +3
Query: 240 IINRSNLXTSFFDPAGGGDPILYQHLF*FFGHPEVYILI 356
++ NL TSFFDPAGGGDPILYQHLF FFGHPEVYILI
Sbjct: 182 LLTDRNLNTSFFDPAGGGDPILYQHLFWFFGHPEVYILI 220
>UniRef50_P48866 Cluster: Cytochrome c oxidase subunit 1; n=179;
cellular organisms|Rep: Cytochrome c oxidase subunit 1 -
Chondrus crispus (Carragheen)
Length = 532
Score = 105 bits (251), Expect = 1e-21
Identities = 50/91 (54%), Positives = 61/91 (67%)
Frame = +3
Query: 240 IINRSNLXTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIISXERGKKETF 419
++ N TSFFD +GGGDPILYQHLF FFGHPEVYILILPGFG+ISHI+S +K F
Sbjct: 217 LLTDRNFNTSFFDASGGGDPILYQHLFWFFGHPEVYILILPGFGMISHIVS-TFSRKPVF 275
Query: 420 XXXXXXXXXXXXXXXXFIV*AHHIFTVGIEL 512
FIV AHH++TVG+++
Sbjct: 276 GYIGMVYAMVSIGVLGFIVWAHHMYTVGLDV 306
Score = 83.0 bits (196), Expect = 6e-15
Identities = 44/85 (51%), Positives = 56/85 (65%)
Frame = +1
Query: 1 YPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AV 180
YPPLSS +H G +VDLAIFSLH++G SS S ++PLFV ++
Sbjct: 137 YPPLSSIQSHSGGAVDLAIFSLHISGASSILGAVNFISTILNMRSPGQSMYRIPLFVWSI 196
Query: 181 GITAFLLXLSLPVLAGAITILLTDR 255
+TAFLL L++PVLAGAIT+LLTDR
Sbjct: 197 LVTAFLLLLAVPVLAGAITMLLTDR 221
>UniRef50_Q0H8Y3 Cluster: Probable intron-encoded endonuclease aI8
precursor [Contains: Truncated non-functional cytochrome
oxidase 1; Intron-encoded endonuclease aI8 (EC
3.1.-.-)]; n=103; Eukaryota|Rep: Probable intron-encoded
endonuclease aI8 precursor [Contains: Truncated
non-functional cytochrome oxidase 1; Intron-encoded
endonuclease aI8 (EC 3.1.-.-)] - Ustilago maydis (Smut
fungus)
Length = 645
Score = 104 bits (249), Expect = 2e-21
Identities = 47/91 (51%), Positives = 61/91 (67%)
Frame = +3
Query: 240 IINRSNLXTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIISXERGKKETF 419
++ N TSF+DPAGGGDPILYQHLF FFGHPEVYILI+PGFG++SHI+S G K F
Sbjct: 209 LLTDRNFNTSFYDPAGGGDPILYQHLFWFFGHPEVYILIIPGFGMVSHIVSAFSG-KPVF 267
Query: 420 XXXXXXXXXXXXXXXXFIV*AHHIFTVGIEL 512
F+V +HH++ VG+++
Sbjct: 268 GYLGMVYAMFSIGILGFLVWSHHMYAVGLDV 298
Score = 87.4 bits (207), Expect = 3e-16
Identities = 48/85 (56%), Positives = 55/85 (64%)
Frame = +1
Query: 1 YPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AV 180
YPPLS +H G SVDLAIFSLHL+GISS + +LPLFV A+
Sbjct: 129 YPPLSGLQSHSGGSVDLAIFSLHLSGISSMLGAMNFITTVLNMRNPGMTLHKLPLFVWAI 188
Query: 181 GITAFLLXLSLPVLAGAITILLTDR 255
+TA LL LSLPVLAGAIT+LLTDR
Sbjct: 189 FVTAILLLLSLPVLAGAITMLLTDR 213
>UniRef50_Q9MCX7 Cluster: Cytochrome c oxidase subunit I; n=181;
Coelomata|Rep: Cytochrome c oxidase subunit I - Piculus
rubiginosus
Length = 504
Score = 103 bits (246), Expect = 5e-21
Identities = 44/60 (73%), Positives = 51/60 (85%)
Frame = +3
Query: 240 IINRSNLXTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIISXERGKKETF 419
++ NL T+FFDPAGGGDPILYQHLF FFGHPEVYILILPGFG+ISH+++ GKKE F
Sbjct: 210 LLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGMISHVVTYYAGKKEPF 269
Score = 88.2 bits (209), Expect = 2e-16
Identities = 50/85 (58%), Positives = 54/85 (63%)
Frame = +1
Query: 1 YPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AV 180
YPPL+ N+AH G SVDLAIFSLHLAGISS S Q PLFV +V
Sbjct: 130 YPPLAGNLAHAGASVDLAIFSLHLAGISSILGAINFITTAINMKPPAISQYQTPLFVWSV 189
Query: 181 GITAFLLXLSLPVLAGAITILLTDR 255
ITA LL LSLPVLA IT+LLTDR
Sbjct: 190 LITAVLLLLSLPVLAAGITMLLTDR 214
>UniRef50_Q28SZ5 Cluster: Cytochrome-c oxidase; n=50; cellular
organisms|Rep: Cytochrome-c oxidase - Jannaschia sp.
(strain CCS1)
Length = 628
Score = 102 bits (245), Expect = 7e-21
Identities = 47/94 (50%), Positives = 61/94 (64%)
Frame = +3
Query: 240 IINRSNLXTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIISXERGKKETF 419
++ N T+FFDPAGGGDPIL+QH+F FFGHPEVYI+ILP FG+ISHI++ KK F
Sbjct: 315 LLTDRNFGTTFFDPAGGGDPILFQHIFWFFGHPEVYIVILPAFGVISHIVA-TFSKKPIF 373
Query: 420 XXXXXXXXXXXXXXXXFIV*AHHIFTVGIELVHE 521
F+V AHH++TVG+ L +
Sbjct: 374 GYLPMVYALVAIGGLGFVVWAHHMYTVGMTLTQQ 407
Score = 72.9 bits (171), Expect = 6e-12
Identities = 38/85 (44%), Positives = 52/85 (61%)
Frame = +1
Query: 1 YPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AV 180
YPP+S+ R+VD AIF++H++G SS + ++PLF +V
Sbjct: 235 YPPISAQGVETSRAVDFAIFAVHVSGASSILGSINFITTFLNMRAPGMTLHKVPLFAWSV 294
Query: 181 GITAFLLXLSLPVLAGAITILLTDR 255
+TA+LL LSLPVLAGAIT+LLTDR
Sbjct: 295 FVTAWLLLLSLPVLAGAITMLLTDR 319
>UniRef50_Q9G8S1 Cluster: Cytochrome c oxidase subunit 1; n=1;
Naegleria gruberi|Rep: Cytochrome c oxidase subunit 1 -
Naegleria gruberi
Length = 633
Score = 101 bits (241), Expect = 2e-20
Identities = 48/85 (56%), Positives = 56/85 (65%)
Frame = +3
Query: 255 NLXTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIISXERGKKETFXXXXX 434
N TSF+DP GGGD +LYQHLF FFGHPEVYILILPGFG++SHII+ KK F
Sbjct: 218 NFNTSFYDPVGGGDVVLYQHLFWFFGHPEVYILILPGFGLVSHIIA-TFSKKRVFGHVPM 276
Query: 435 XXXXXXXXXXXFIV*AHHIFTVGIE 509
FIV AHH++T GI+
Sbjct: 277 IAAMLMIGLIGFIVWAHHMYTSGID 301
Score = 73.3 bits (172), Expect = 5e-12
Identities = 40/85 (47%), Positives = 49/85 (57%)
Frame = +1
Query: 1 YPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AV 180
YPPLSS +H G SVDL IFS HL GI S LPLFV +V
Sbjct: 133 YPPLSSLQSHSGASVDLMIFSFHLVGIGSIVAAINFICTIFYYKNEAMFNKDLPLFVWSV 192
Query: 181 GITAFLLXLSLPVLAGAITILLTDR 255
+T+FL+ +++PVLA AIT+LL DR
Sbjct: 193 AVTSFLVIVAIPVLAAAITLLLFDR 217
>UniRef50_A7UG06 Cluster: Cytochrome oxidase subunits 1 and 2
polyprotein; n=1; Phaeosphaeria nodorum SN15|Rep:
Cytochrome oxidase subunits 1 and 2 polyprotein -
Phaeosphaeria nodorum SN15
Length = 789
Score = 98.7 bits (235), Expect = 1e-19
Identities = 47/91 (51%), Positives = 58/91 (63%)
Frame = +3
Query: 240 IINRSNLXTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIISXERGKKETF 419
++ N TSFF+ AGGGDPILYQHLF FFGHPEVYILI+PGFGIIS IS K F
Sbjct: 210 VLTDRNFNTSFFEVAGGGDPILYQHLFWFFGHPEVYILIIPGFGIISTTIS-ANSNKSVF 268
Query: 420 XXXXXXXXXXXXXXXXFIV*AHHIFTVGIEL 512
F+V +HH++TVG+++
Sbjct: 269 GYLGMVYAMCSIGILGFVVWSHHMYTVGLDV 299
Score = 77.0 bits (181), Expect = 4e-13
Identities = 45/85 (52%), Positives = 50/85 (58%)
Frame = +1
Query: 1 YPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AV 180
YPPLS +H G SVDLAIF LHL+GISS +L LF AV
Sbjct: 130 YPPLSGIQSHSGPSVDLAIFGLHLSGISSLLGAMNFMTTTFNMRSPGIRLHKLILFAWAV 189
Query: 181 GITAFLLXLSLPVLAGAITILLTDR 255
ITA LL LSLPVLAG IT++LTDR
Sbjct: 190 VITAVLLLLSLPVLAGGITMVLTDR 214
>UniRef50_Q9ZZX1 Cluster: Intron-encoded DNA endonuclease aI5 alpha
precursor (DNA endonuclease I-SceIV) [Contains:
Truncated non-functional cytochrome oxidase 1; DNA
endonuclease aI5 alpha (EC 3.1.-.-) (Intron-encoded
endonuclease I- SceIV)]; n=2; Saccharomycetales|Rep:
Intron-encoded DNA endonuclease aI5 alpha precursor (DNA
endonuclease I-SceIV) [Contains: Truncated
non-functional cytochrome oxidase 1; DNA endonuclease
aI5 alpha (EC 3.1.-.-) (Intron-encoded endonuclease I-
SceIV)] - Saccharomyces cerevisiae (Baker's yeast)
Length = 630
Score = 98.3 bits (234), Expect = 1e-19
Identities = 45/85 (52%), Positives = 57/85 (67%)
Frame = +3
Query: 255 NLXTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIISXERGKKETFXXXXX 434
N TSFF+ +GGGDPILY+HLF FFGHPEVYILI+PGFGIISH++S KK F
Sbjct: 215 NFNTSFFEVSGGGDPILYEHLFWFFGHPEVYILIIPGFGIISHVVS-TYSKKPVFGEISM 273
Query: 435 XXXXXXXXXXXFIV*AHHIFTVGIE 509
F+V +HH++ VG++
Sbjct: 274 VYAMASIGLLGFLVWSHHMYIVGLD 298
Score = 80.2 bits (189), Expect = 4e-14
Identities = 45/85 (52%), Positives = 52/85 (61%)
Frame = +1
Query: 1 YPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AV 180
YPPLSS AH G SVDLAIF+LHL ISS + +LPLFV ++
Sbjct: 130 YPPLSSIQAHSGPSVDLAIFALHLTSISSLLGAINFIVTTLNMRTNGMTMHKLPLFVWSI 189
Query: 181 GITAFLLXLSLPVLAGAITILLTDR 255
ITAFLL LSLPVL+ IT+LL DR
Sbjct: 190 FITAFLLLLSLPVLSAGITMLLLDR 214
>UniRef50_Q7YEU6 Cluster: Endonuclease; n=4; Fungi/Metazoa
group|Rep: Endonuclease - Saccharomyces servazzii
(Yeast)
Length = 675
Score = 97.1 bits (231), Expect = 3e-19
Identities = 45/85 (52%), Positives = 55/85 (64%)
Frame = +3
Query: 255 NLXTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIISXERGKKETFXXXXX 434
N TSFF+ AGGGDPI YQH F FFGHPEVYILI+PGFGI+SHI+S KK F
Sbjct: 215 NFNTSFFEVAGGGDPIFYQHAFWFFGHPEVYILIIPGFGIVSHIVS-TYSKKPVFGEISM 273
Query: 435 XXXXXXXXXXXFIV*AHHIFTVGIE 509
F+V +HH++ VG++
Sbjct: 274 VYAMASIGLLGFLVWSHHMYIVGLD 298
Score = 83.0 bits (196), Expect = 6e-15
Identities = 47/85 (55%), Positives = 52/85 (61%)
Frame = +1
Query: 1 YPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AV 180
YPPLSS AH G SVDLAIFSLHL ISS S ++PLFV A+
Sbjct: 130 YPPLSSIQAHSGPSVDLAIFSLHLTSISSLLGAINFIVTTLNMRTNGMSMHKMPLFVWAI 189
Query: 181 GITAFLLXLSLPVLAGAITILLTDR 255
ITAFLL LSLPVL+ IT+LL DR
Sbjct: 190 FITAFLLLLSLPVLSAGITMLLMDR 214
>UniRef50_Q1XA94 Cluster: Cytochrome c oxidase subunit I; n=825;
Eukaryota|Rep: Cytochrome c oxidase subunit I -
Paracoccidioides brasiliensis
Length = 710
Score = 97.1 bits (231), Expect = 3e-19
Identities = 47/91 (51%), Positives = 59/91 (64%)
Frame = +3
Query: 240 IINRSNLXTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIISXERGKKETF 419
++ NL TSF++ AGGGD ILYQHLF FFGHPEVYILI+PGFGIIS +IS K F
Sbjct: 236 LLTDRNLNTSFYELAGGGDAILYQHLFWFFGHPEVYILIIPGFGIISTVIS-ANSNKNVF 294
Query: 420 XXXXXXXXXXXXXXXXFIV*AHHIFTVGIEL 512
FIV +HH++TVG+++
Sbjct: 295 GYLGMVYAMMSIGLLGFIVWSHHMYTVGLDV 325
Score = 72.1 bits (169), Expect = 1e-11
Identities = 43/85 (50%), Positives = 47/85 (55%)
Frame = +1
Query: 1 YPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AV 180
YPPLS +H VDL IF LHL+GISS +L LF AV
Sbjct: 156 YPPLSGIQSHSSMGVDLGIFGLHLSGISSLLGAINFIATLLNMRSPGIKLHKLALFGWAV 215
Query: 181 GITAFLLXLSLPVLAGAITILLTDR 255
ITA LL LSLPVLA AIT+LLTDR
Sbjct: 216 VITAVLLLLSLPVLAAAITMLLTDR 240
>UniRef50_Q1NET5 Cluster: Cytochrome-c oxidase; n=3;
Alphaproteobacteria|Rep: Cytochrome-c oxidase -
Sphingomonas sp. SKA58
Length = 556
Score = 96.3 bits (229), Expect = 6e-19
Identities = 46/91 (50%), Positives = 57/91 (62%)
Frame = +3
Query: 240 IINRSNLXTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIISXERGKKETF 419
++ N T+F+D AGGGDP LYQHLF FFGHPEVYI+ILPGFGIIS I+S +K F
Sbjct: 252 LLTDRNFGTTFYDAAGGGDPELYQHLFWFFGHPEVYIMILPGFGIISQIVS-TFSRKPVF 310
Query: 420 XXXXXXXXXXXXXXXXFIV*AHHIFTVGIEL 512
F+V AHH+FT G+ +
Sbjct: 311 GYLGMAYAMVAIGVVGFVVWAHHMFTTGMSV 341
Score = 69.7 bits (163), Expect = 6e-11
Identities = 40/85 (47%), Positives = 52/85 (61%)
Frame = +1
Query: 1 YPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AV 180
Y PLS++ G +VD+AI SLH+AG SS + ++PLFV +V
Sbjct: 173 YAPLSTS-GSAGPAVDMAILSLHIAGASSILGAINFITTILNMRAPGMTLHKMPLFVWSV 231
Query: 181 GITAFLLXLSLPVLAGAITILLTDR 255
+TAFLL L+LPVLA AIT+LLTDR
Sbjct: 232 LVTAFLLLLALPVLAAAITMLLTDR 256
>UniRef50_Q9B8X8 Cluster: Cytochrome c oxidase subunit I; n=517;
Bilateria|Rep: Cytochrome c oxidase subunit I -
Schistosoma mansoni (Blood fluke)
Length = 609
Score = 94.3 bits (224), Expect = 2e-18
Identities = 42/85 (49%), Positives = 52/85 (61%)
Frame = +3
Query: 255 NLXTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIISXERGKKETFXXXXX 434
N T+FF+P+GGGDPIL+QHLF FFGHPEVY+LILPGFGI+SHI +F
Sbjct: 304 NFGTAFFEPSGGGDPILFQHLFWFFGHPEVYVLILPGFGIVSHICMSLSNNDSSFGYYGL 363
Query: 435 XXXXXXXXXXXFIV*AHHIFTVGIE 509
+V HH+F VG +
Sbjct: 364 ICAMASIVCLGSVVWGHHMFMVGFD 388
Score = 46.4 bits (105), Expect = 6e-04
Identities = 36/85 (42%), Positives = 41/85 (48%)
Frame = +1
Query: 1 YPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AV 180
YPPLS G VD +FSLHLAG+SS S + V A
Sbjct: 225 YPPLSI-WEGSGFGVDYLMFSLHLAGVSSLIGSVNFISTIFSRLSFNCS-----IIVWAY 278
Query: 181 GITAFLLXLSLPVLAGAITILLTDR 255
T+ LL LSLPVLA IT+LL DR
Sbjct: 279 LFTSVLLLLSLPVLASGITMLLFDR 303
>UniRef50_Q5W914 Cluster: Cytochrome c oxidase subunit I; n=9;
Coelomata|Rep: Cytochrome c oxidase subunit I - Lingula
unguis
Length = 573
Score = 93.9 bits (223), Expect = 3e-18
Identities = 42/83 (50%), Positives = 51/83 (61%)
Frame = +3
Query: 264 TSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIISXERGKKETFXXXXXXXX 443
TSF+ P GGGDPIL+QHLF FFGHPEVYILILP FG+ISHI+ K F
Sbjct: 220 TSFYYPEGGGDPILWQHLFWFFGHPEVYILILPAFGVISHILCRSSAKLHVFGKIGMSWA 279
Query: 444 XXXXXXXXFIV*AHHIFTVGIEL 512
F+V HH+F G+++
Sbjct: 280 SMGIAWMGFLVWGHHMFVAGLDI 302
Score = 55.6 bits (128), Expect = 1e-06
Identities = 33/86 (38%), Positives = 46/86 (53%), Gaps = 1/86 (1%)
Frame = +1
Query: 1 YPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQL-PLFV*A 177
YPPLS++ G +DLA+FSLH+AG+SS F L P+ +
Sbjct: 131 YPPLSNSEFMDGLPIDLAVFSLHMAGMSSIAGSINFLVTIFNMRMGALFFMSLNPMLIWT 190
Query: 178 VGITAFLLXLSLPVLAGAITILLTDR 255
+ T+ LL S+PVLA +T+LL DR
Sbjct: 191 LFGTSILLVTSVPVLAAGLTLLLLDR 216
>UniRef50_Q9MLW1 Cluster: Cytochrome c oxidase subunit I; n=5;
Naupactini|Rep: Cytochrome c oxidase subunit I -
Galapaganus collaris
Length = 406
Score = 90.2 bits (214), Expect = 4e-17
Identities = 49/84 (58%), Positives = 56/84 (66%)
Frame = +1
Query: 4 PPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVG 183
PPLS+NIAH G SVDLAIFSLH+AG+ S + ++PLFV AV
Sbjct: 49 PPLSANIAHEGSSVDLAIFSLHMAGVXSILGAINFISTVLNMRPSGMTPXRMPLFVWAVE 108
Query: 184 ITAFLLXLSLPVLAGAITILLTDR 255
ITA LL LSLPVLAGAIT+LLTDR
Sbjct: 109 ITAILLLLSLPVLAGAITMLLTDR 132
Score = 56.4 bits (130), Expect = 6e-07
Identities = 23/32 (71%), Positives = 26/32 (81%)
Frame = +3
Query: 240 IINRSNLXTSFFDPAGGGDPILYQHLF*FFGH 335
++ N+ TSFFDPAGGGDPILYQHLF F GH
Sbjct: 128 LLTDRNINTSFFDPAGGGDPILYQHLFWFXGH 159
>UniRef50_Q58PB7 Cluster: Cytochrome c oxidase subunit I; n=106;
Bilateria|Rep: Cytochrome c oxidase subunit I -
Homalopoma maculosa
Length = 219
Score = 89.0 bits (211), Expect = 9e-17
Identities = 49/85 (57%), Positives = 54/85 (63%)
Frame = +1
Query: 1 YPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AV 180
YPPLS N AH G SVDLAIFSLHLAG+SS + + LFV +V
Sbjct: 112 YPPLSGNTAHAGPSVDLAIFSLHLAGVSSILGAVNFITTVINMRWGAMKIELVSLFVWSV 171
Query: 181 GITAFLLXLSLPVLAGAITILLTDR 255
ITA LL LSLPVLAGAIT+LLTDR
Sbjct: 172 KITAILLLLSLPVLAGAITMLLTDR 196
Score = 49.6 bits (113), Expect = 7e-05
Identities = 20/27 (74%), Positives = 22/27 (81%)
Frame = +3
Query: 240 IINRSNLXTSFFDPAGGGDPILYQHLF 320
++ N TSFFDPAGGGDPILYQHLF
Sbjct: 192 LLTDRNFNTSFFDPAGGGDPILYQHLF 218
>UniRef50_A6XEV4 Cluster: Cytochrome c oxidase subunit 1; n=1;
Munidopsis verrucosus|Rep: Cytochrome c oxidase subunit
1 - Munidopsis verrucosus
Length = 154
Score = 88.2 bits (209), Expect = 2e-16
Identities = 47/83 (56%), Positives = 56/83 (67%)
Frame = +1
Query: 7 PLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGI 186
PL+S+IAH G SVD+AIFSLHLAG+SS + D++PLF+ AV I
Sbjct: 72 PLASSIAHAGASVDMAIFSLHLAGVSSILGSVNFMTTVINMRAKGMTLDRVPLFIWAVFI 131
Query: 187 TAFLLXLSLPVLAGAITILLTDR 255
T LL LSLPVLAGAIT+LLTDR
Sbjct: 132 TTVLLLLSLPVLAGAITMLLTDR 154
>UniRef50_Q8SK39 Cluster: Cytochrome c oxidase subunit I; n=455;
cellular organisms|Rep: Cytochrome c oxidase subunit I -
Pandaka lidwilli
Length = 507
Score = 87.8 bits (208), Expect = 2e-16
Identities = 50/85 (58%), Positives = 53/85 (62%)
Frame = +1
Query: 1 YPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AV 180
YPPL+ N+AH G SVDL IFSLHLAGISS S Q PLFV AV
Sbjct: 118 YPPLAGNLAHAGASVDLTIFSLHLAGISSILGAINFITTIMNMKPPAISQYQTPLFVWAV 177
Query: 181 GITAFLLXLSLPVLAGAITILLTDR 255
ITA LL LSLPVLA IT+LLTDR
Sbjct: 178 LITAVLLLLSLPVLAAGITMLLTDR 202
>UniRef50_A2T435 Cluster: Cytochrome c oxidase subunit I; n=126;
Fungi/Metazoa group|Rep: Cytochrome c oxidase subunit I
- Placozoan sp. BZ2423
Length = 498
Score = 87.4 bits (207), Expect = 3e-16
Identities = 48/85 (56%), Positives = 56/85 (65%)
Frame = +1
Query: 1 YPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AV 180
YPPL+S AH G SVD+AIFSLHLAG+SS + ++PLFV +V
Sbjct: 130 YPPLASIQAHSGGSVDMAIFSLHLAGLSSILGAMNFITTVMNMRTPGMTMSRIPLFVWSV 189
Query: 181 GITAFLLXLSLPVLAGAITILLTDR 255
ITA LL LSLPVLAGAIT+LLTDR
Sbjct: 190 LITAILLLLSLPVLAGAITMLLTDR 214
Score = 51.6 bits (118), Expect = 2e-05
Identities = 21/23 (91%), Positives = 22/23 (95%)
Frame = +3
Query: 264 TSFFDPAGGGDPILYQHLF*FFG 332
T+FFDPAGGGDPILYQHLF FFG
Sbjct: 218 TTFFDPAGGGDPILYQHLFWFFG 240
>UniRef50_Q6ED53 Cluster: Cox1-i5 protein; n=2; Candida
stellata|Rep: Cox1-i5 protein - Candida stellata (Yeast)
Length = 763
Score = 87.4 bits (207), Expect = 3e-16
Identities = 41/85 (48%), Positives = 53/85 (62%)
Frame = +3
Query: 255 NLXTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIISXERGKKETFXXXXX 434
N TSFF +GGGDP+LY+H+F FFGHPEVYILI+P FG++S I+ KK F
Sbjct: 232 NFNTSFFVVSGGGDPLLYEHIFWFFGHPEVYILIVPVFGVVSQIVQV-YAKKPIFGKIGM 290
Query: 435 XXXXXXXXXXXFIV*AHHIFTVGIE 509
F V +HH+FTVG++
Sbjct: 291 IYAMASIGFLGFCVWSHHMFTVGLD 315
Score = 77.0 bits (181), Expect = 4e-13
Identities = 40/94 (42%), Positives = 56/94 (59%)
Frame = +1
Query: 1 YPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AV 180
YPPL+S +H G S+D+AIF+LHL+G+SS + +LPLFV +V
Sbjct: 147 YPPLTSLQSHSGSSIDMAIFALHLSGLSSIFGAINLMVTIINMRANGMDYSKLPLFVWSV 206
Query: 181 GITAFLLXLSLPVLAGAITILLTDRTXIHHFLIL 282
ITA L+ L+LPVLA +T+LL DR F ++
Sbjct: 207 LITAVLIILALPVLAAGLTMLLMDRNFNTSFFVV 240
>UniRef50_Q6ED52 Cluster: Cox1-i4 protein; n=1; Candida
stellata|Rep: Cox1-i4 protein - Candida stellata (Yeast)
Length = 676
Score = 87.4 bits (207), Expect = 3e-16
Identities = 41/85 (48%), Positives = 53/85 (62%)
Frame = +3
Query: 255 NLXTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIISXERGKKETFXXXXX 434
N TSFF +GGGDP+LY+H+F FFGHPEVYILI+P FG++S I+ KK F
Sbjct: 232 NFNTSFFVVSGGGDPLLYEHIFWFFGHPEVYILIVPVFGVVSQIVQV-YAKKPIFGKIGM 290
Query: 435 XXXXXXXXXXXFIV*AHHIFTVGIE 509
F V +HH+FTVG++
Sbjct: 291 IYAMASIGFLGFCVWSHHMFTVGLD 315
Score = 77.0 bits (181), Expect = 4e-13
Identities = 40/94 (42%), Positives = 56/94 (59%)
Frame = +1
Query: 1 YPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AV 180
YPPL+S +H G S+D+AIF+LHL+G+SS + +LPLFV +V
Sbjct: 147 YPPLTSLQSHSGSSIDMAIFALHLSGLSSIFGAINLMVTIINMRANGMDYSKLPLFVWSV 206
Query: 181 GITAFLLXLSLPVLAGAITILLTDRTXIHHFLIL 282
ITA L+ L+LPVLA +T+LL DR F ++
Sbjct: 207 LITAVLIILALPVLAAGLTMLLMDRNFNTSFFVV 240
>UniRef50_Q0H8Y1 Cluster: Probable intron-encoded endonuclease aI5
precursor [Contains: Truncated non-functional cytochrome
oxidase 1; Intron-encoded endonuclease aI5 (EC
3.1.-.-)]; n=2; Ustilago maydis|Rep: Probable
intron-encoded endonuclease aI5 precursor [Contains:
Truncated non-functional cytochrome oxidase 1;
Intron-encoded endonuclease aI5 (EC 3.1.-.-)] - Ustilago
maydis (Smut fungus)
Length = 536
Score = 87.4 bits (207), Expect = 3e-16
Identities = 48/85 (56%), Positives = 55/85 (64%)
Frame = +1
Query: 1 YPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AV 180
YPPLS +H G SVDLAIFSLHL+GISS + +LPLFV A+
Sbjct: 129 YPPLSGLQSHSGGSVDLAIFSLHLSGISSMLGAMNFITTVLNMRNPGMTLHKLPLFVWAI 188
Query: 181 GITAFLLXLSLPVLAGAITILLTDR 255
+TA LL LSLPVLAGAIT+LLTDR
Sbjct: 189 FVTAILLLLSLPVLAGAITMLLTDR 213
Score = 48.4 bits (110), Expect = 2e-04
Identities = 19/27 (70%), Positives = 22/27 (81%)
Frame = +3
Query: 240 IINRSNLXTSFFDPAGGGDPILYQHLF 320
++ N TSF+DPAGGGDPILYQHLF
Sbjct: 209 LLTDRNFNTSFYDPAGGGDPILYQHLF 235
>UniRef50_Q02766 Cluster: Cytochrome c oxidase subunit 1; n=107;
Alveolata|Rep: Cytochrome c oxidase subunit 1 -
Plasmodium falciparum
Length = 476
Score = 87.0 bits (206), Expect = 4e-16
Identities = 42/91 (46%), Positives = 54/91 (59%)
Frame = +3
Query: 240 IINRSNLXTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIISXERGKKETF 419
+++ + T FFDP GDPILYQHLF FFGHPEVYILILP FG+ISH+IS + F
Sbjct: 215 LLSDLHFNTLFFDPTFAGDPILYQHLFWFFGHPEVYILILPAFGVISHVISTNY-CRNLF 273
Query: 420 XXXXXXXXXXXXXXXXFIV*AHHIFTVGIEL 512
+V HH++T G+E+
Sbjct: 274 GNQSMILAMGCIAVLGSLVWVHHMYTTGLEV 304
>UniRef50_Q8SHP5 Cluster: Cytochrome c oxidase subunit I; n=15;
Fungi/Metazoa group|Rep: Cytochrome c oxidase subunit I
- Trichoderma reesei (Hypocrea jecorina)
Length = 635
Score = 85.0 bits (201), Expect = 1e-15
Identities = 38/56 (67%), Positives = 43/56 (76%)
Frame = +3
Query: 240 IINRSNLXTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIISXERGK 407
++ N TSFF+ AGGGDPIL+QHLF FFGHPEVYILI+PGFGIIS IS K
Sbjct: 235 VLTDRNFNTSFFEVAGGGDPILFQHLFWFFGHPEVYILIIPGFGIISTTISSSSNK 290
Score = 45.2 bits (102), Expect = 0.001
Identities = 20/29 (68%), Positives = 24/29 (82%)
Frame = +1
Query: 1 YPPLSSNIAHRGRSVDLAIFSLHLAGISS 87
YPPLS +H G SVDLAIF+LHL+G+SS
Sbjct: 162 YPPLSGLQSHSGPSVDLAIFALHLSGVSS 190
>UniRef50_Q06473 Cluster: Cytochrome c oxidase subunit 1 (EC
1.9.3.1) (Cytochrome c oxidase polypeptide I)
(Cytochrome aa3 subunit 1) (Oxidase aa(3) subunit 1);
n=59; Cyanobacteria|Rep: Cytochrome c oxidase subunit 1
(EC 1.9.3.1) (Cytochrome c oxidase polypeptide I)
(Cytochrome aa3 subunit 1) (Oxidase aa(3) subunit 1) -
Synechocystis sp. (strain PCC 6803)
Length = 551
Score = 82.2 bits (194), Expect = 1e-14
Identities = 39/80 (48%), Positives = 48/80 (60%)
Frame = +3
Query: 264 TSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIISXERGKKETFXXXXXXXX 443
TSFF+P GGGDP++YQHLF F+ HP VYI+ILP FG+IS +I +K F
Sbjct: 228 TSFFNPVGGGDPVVYQHLFWFYSHPAVYIMILPFFGVISEVIPV-HARKPIFGYRAIAYS 286
Query: 444 XXXXXXXXFIV*AHHIFTVG 503
IV AHH+FT G
Sbjct: 287 SLAISFLGLIVWAHHMFTSG 306
Score = 37.1 bits (82), Expect = 0.39
Identities = 29/84 (34%), Positives = 36/84 (42%)
Frame = +1
Query: 1 YPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AV 180
YPPLS G +L I SL L G SS +PLF A+
Sbjct: 142 YPPLSLLSGKWGE--ELWILSLLLVGTSSILGAINFVTTILKMRIKDMDLHSMPLFCWAM 199
Query: 181 GITAFLLXLSLPVLAGAITILLTD 252
T+ L+ LS PVLA A+ +L D
Sbjct: 200 LATSSLILLSTPVLASALILLSFD 223
>UniRef50_P03878 Cluster: Intron-encoded DNA endonuclease aI4
precursor (DNA endonuclease I- SceII) [Contains:
Truncated non-functional cytochrome oxidase 1; DNA
endonuclease aI4 (EC 3.1.-.-) (Intron-encoded
endonuclease I-SceII)]; n=4; Saccharomycetales|Rep:
Intron-encoded DNA endonuclease aI4 precursor (DNA
endonuclease I- SceII) [Contains: Truncated
non-functional cytochrome oxidase 1; DNA endonuclease
aI4 (EC 3.1.-.-) (Intron-encoded endonuclease I-SceII)]
- Saccharomyces cerevisiae (Baker's yeast)
Length = 556
Score = 80.2 bits (189), Expect = 4e-14
Identities = 45/85 (52%), Positives = 52/85 (61%)
Frame = +1
Query: 1 YPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AV 180
YPPLSS AH G SVDLAIF+LHL ISS + +LPLFV ++
Sbjct: 130 YPPLSSIQAHSGPSVDLAIFALHLTSISSLLGAINFIVTTLNMRTNGMTMHKLPLFVWSI 189
Query: 181 GITAFLLXLSLPVLAGAITILLTDR 255
ITAFLL LSLPVL+ IT+LL DR
Sbjct: 190 FITAFLLLLSLPVLSAGITMLLLDR 214
Score = 49.6 bits (113), Expect = 7e-05
Identities = 21/35 (60%), Positives = 26/35 (74%)
Frame = +3
Query: 255 NLXTSFFDPAGGGDPILYQHLF*FFGHPEVYILIL 359
N TSFF+ +GGGDPILY+HLF FFG I++L
Sbjct: 215 NFNTSFFEVSGGGDPILYEHLFWFFGQTVATIIML 249
>UniRef50_O47573 Cluster: Cytochrome c oxidase subunit I; n=42;
Nematoda|Rep: Cytochrome c oxidase subunit I -
Onchocerca volvulus
Length = 548
Score = 79.4 bits (187), Expect = 7e-14
Identities = 37/86 (43%), Positives = 48/86 (55%)
Frame = +3
Query: 255 NLXTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIISXERGKKETFXXXXX 434
N TSF+D GG+P+LYQHLF FFGHPEVY++ILP FGIIS + K F
Sbjct: 224 NFNTSFYDTKKGGNPLLYQHLFWFFGHPEVYVIILPVFGIISEAVLFLTDKDRLFGQTSM 283
Query: 435 XXXXXXXXXXXFIV*AHHIFTVGIEL 512
V HH++T G+++
Sbjct: 284 TFASIWIAVLGTSVWGHHMYTAGLDI 309
Score = 52.4 bits (120), Expect = 1e-05
Identities = 32/85 (37%), Positives = 41/85 (48%)
Frame = +1
Query: 1 YPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AV 180
YPPLS S+D I LH GI S + DQ+ +FV
Sbjct: 140 YPPLSVE-GQPELSLDTMILGLHTVGIGSLLGAINFMVTTQNMRSTAVTLDQISMFVWTS 198
Query: 181 GITAFLLXLSLPVLAGAITILLTDR 255
+T+FLL LS+PVLAG++ LL DR
Sbjct: 199 YLTSFLLVLSVPVLAGSLLFLLLDR 223
>UniRef50_P14544 Cluster: Cytochrome c oxidase subunit 1; n=7;
Eukaryota|Rep: Cytochrome c oxidase subunit 1 -
Leishmania tarentolae (Sauroleishmania tarentolae)
Length = 549
Score = 78.6 bits (185), Expect = 1e-13
Identities = 39/86 (45%), Positives = 51/86 (59%)
Frame = +3
Query: 255 NLXTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIISXERGKKETFXXXXX 434
N TSF+D GGGD IL+QH+F FFGHPEVYI++LP FG+IS I+ G + F
Sbjct: 217 NFNTSFYDVVGGGDLILFQHIFWFFGHPEVYIILLPVFGLISTIVEV-IGFRCVFSTVAM 275
Query: 435 XXXXXXXXXXXFIV*AHHIFTVGIEL 512
V AHH+F VG+++
Sbjct: 276 IYSMILIAILGMFVWAHHMFVVGMDV 301
Score = 54.8 bits (126), Expect = 2e-06
Identities = 32/85 (37%), Positives = 42/85 (49%)
Frame = +1
Query: 1 YPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AV 180
YP L H + D +F++HL GISS SF LF+ A
Sbjct: 132 YPTLICIDFHSSLACDFVMFAVHLLGISSILNSINLLGTLFCCRRKFFSFLSWSLFIWAA 191
Query: 181 GITAFLLXLSLPVLAGAITILLTDR 255
ITA LL ++LPVLAG +T++L DR
Sbjct: 192 LITAILLIITLPVLAGGVTLILCDR 216
>UniRef50_P33518 Cluster: Cytochrome c oxidase polypeptide 1; n=4;
Halobacteriaceae|Rep: Cytochrome c oxidase polypeptide 1
- Halobacterium salinarium (Halobacterium halobium)
Length = 593
Score = 77.4 bits (182), Expect = 3e-13
Identities = 41/85 (48%), Positives = 50/85 (58%)
Frame = +3
Query: 255 NLXTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIISXERGKKETFXXXXX 434
N T+FF AGG DPI +QHLF FFGHPEVY+L+LP GI+S I+ G+K F
Sbjct: 269 NFGTTFFTVAGG-DPIFWQHLFWFFGHPEVYVLVLPPMGIVSLILPKFSGRK-LFGFKFV 326
Query: 435 XXXXXXXXXXXFIV*AHHIFTVGIE 509
F V AHH+FT GI+
Sbjct: 327 VYSTLAIGVLSFGVWAHHMFTTGID 351
>UniRef50_Q6ED51 Cluster: Cox-i3 protein; n=1; Candida stellata|Rep:
Cox-i3 protein - Candida stellata (Yeast)
Length = 588
Score = 77.0 bits (181), Expect = 4e-13
Identities = 40/94 (42%), Positives = 56/94 (59%)
Frame = +1
Query: 1 YPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AV 180
YPPL+S +H G S+D+AIF+LHL+G+SS + +LPLFV +V
Sbjct: 147 YPPLTSLQSHSGSSIDMAIFALHLSGLSSIFGAINLMVTIINMRANGMDYSKLPLFVWSV 206
Query: 181 GITAFLLXLSLPVLAGAITILLTDRTXIHHFLIL 282
ITA L+ L+LPVLA +T+LL DR F ++
Sbjct: 207 LITAVLIILALPVLAAGLTMLLMDRNFNTSFFVV 240
Score = 46.0 bits (104), Expect = 8e-04
Identities = 23/52 (44%), Positives = 35/52 (67%)
Frame = +3
Query: 255 NLXTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIISXERGKK 410
N TSFF +GGGDP+LY+H+F FFG +++ +I+ II++ I + KK
Sbjct: 232 NFNTSFFVVSGGGDPLLYEHIFWFFG--QIWPIIIIIIIIINYAICGKDFKK 281
>UniRef50_Q6ED50 Cluster: Cox-i2 protein; n=1; Candida stellata|Rep:
Cox-i2 protein - Candida stellata (Yeast)
Length = 586
Score = 77.0 bits (181), Expect = 4e-13
Identities = 40/94 (42%), Positives = 56/94 (59%)
Frame = +1
Query: 1 YPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AV 180
YPPL+S +H G S+D+AIF+LHL+G+SS + +LPLFV +V
Sbjct: 147 YPPLTSLQSHSGSSIDMAIFALHLSGLSSIFGAINLMVTIINMRANGMDYSKLPLFVWSV 206
Query: 181 GITAFLLXLSLPVLAGAITILLTDRTXIHHFLIL 282
ITA L+ L+LPVLA +T+LL DR F ++
Sbjct: 207 LITAVLIILALPVLAAGLTMLLMDRNFNTSFFVV 240
Score = 38.3 bits (85), Expect = 0.17
Identities = 21/40 (52%), Positives = 27/40 (67%)
Frame = +3
Query: 255 NLXTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGI 374
N TSFF +GGGDP+LY+H+ F+ +P V ILI GI
Sbjct: 232 NFNTSFFVVSGGGDPLLYEHI--FYKNP-VLILIWLTSGI 268
>UniRef50_A5UVJ0 Cluster: Cytochrome-c oxidase; n=2;
Roseiflexus|Rep: Cytochrome-c oxidase - Roseiflexus sp.
RS-1
Length = 641
Score = 75.4 bits (177), Expect = 1e-12
Identities = 39/81 (48%), Positives = 47/81 (58%)
Frame = +3
Query: 264 TSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIISXERGKKETFXXXXXXXX 443
T FF P GGD +L+QHLF FFGHPEVYILILP GIIS ++ +K F
Sbjct: 235 TRFFLPNLGGDAVLWQHLFWFFGHPEVYILILPTMGIISEVL-PTFSRKPIFGYAFVAYS 293
Query: 444 XXXXXXXXFIV*AHHIFTVGI 506
F+V AHH+F VG+
Sbjct: 294 GVAIGFLGFLVWAHHMFAVGL 314
Score = 34.7 bits (76), Expect = 2.1
Identities = 24/85 (28%), Positives = 35/85 (41%)
Frame = +1
Query: 1 YPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AV 180
Y PL+ VD I + L G++S + +++PLFV
Sbjct: 147 YAPLTQKQFAPTAGVDYWIVGIGLTGVASIAGALNFIVTILNMRAPGMTLNRMPLFVWMQ 206
Query: 181 GITAFLLXLSLPVLAGAITILLTDR 255
+ AF+L + PVL A LL DR
Sbjct: 207 LVVAFILIFAFPVLTVATIQLLFDR 231
>UniRef50_P29649 Cluster: Cytochrome c oxidase subunit 1; n=441;
Bilateria|Rep: Cytochrome c oxidase subunit 1 - Pantodon
buchholtzi (Butterflyfish)
Length = 184
Score = 75.4 bits (177), Expect = 1e-12
Identities = 35/63 (55%), Positives = 42/63 (66%)
Frame = +3
Query: 324 FFGHPEVYILILPGFGIISHIISXERGKKETFXXXXXXXXXXXXXXXXFIV*AHHIFTVG 503
FFGHPEVYILILPGFG+ISHI++ GKKE F FIV AHH+FTVG
Sbjct: 2 FFGHPEVYILILPGFGMISHIVAYYSGKKEPFGYMGMVWAMMAIGLLGFIVWAHHMFTVG 61
Query: 504 IEL 512
+++
Sbjct: 62 MDV 64
>UniRef50_A6C5X9 Cluster: Cytochrome caa3 oxidase; n=3;
Bacteria|Rep: Cytochrome caa3 oxidase - Planctomyces
maris DSM 8797
Length = 754
Score = 74.9 bits (176), Expect = 2e-12
Identities = 37/83 (44%), Positives = 48/83 (57%)
Frame = +3
Query: 258 LXTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIISXERGKKETFXXXXXX 437
L ++FFDP GG +L+QH F FGHPEVYILILPGFG+IS +I +K +
Sbjct: 234 LGSAFFDPTRGGSAVLWQHYFWIFGHPEVYILILPGFGMISEVIPV-FSRKPIYGYTFVA 292
Query: 438 XXXXXXXXXXFIV*AHHIFTVGI 506
+ V AHH+F VG+
Sbjct: 293 ASSVAIVLLGYGVWAHHMFAVGL 315
Score = 41.9 bits (94), Expect = 0.014
Identities = 28/85 (32%), Positives = 38/85 (44%)
Frame = +1
Query: 1 YPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AV 180
Y PLSS + VD I L + GI S S ++PLFV +
Sbjct: 148 YVPLSSKAYSSLQGVDYWIIGLLIMGIGSVSGAINIFATIINLRAPGMSLQRVPLFVWMM 207
Query: 181 GITAFLLXLSLPVLAGAITILLTDR 255
+ A L+ L+LP L A+ +LL DR
Sbjct: 208 LMQAILIILALPALNSALAMLLIDR 232
>UniRef50_Q8M352 Cluster: I-SceII DNA endonuclease-like protein;
n=1; Saccharomyces castellii|Rep: I-SceII DNA
endonuclease-like protein - Saccharomyces castellii
(Yeast)
Length = 598
Score = 74.5 bits (175), Expect = 2e-12
Identities = 41/85 (48%), Positives = 51/85 (60%)
Frame = +1
Query: 1 YPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AV 180
YPPL+S AH G SVDLAIF+LH+ ISS + +LPLFV A+
Sbjct: 130 YPPLASIQAHSGPSVDLAIFALHMTSISSLLGAINFIVTTLNMRTNGMTMHKLPLFVWAI 189
Query: 181 GITAFLLXLSLPVLAGAITILLTDR 255
ITA LL L+LPVL+ +T+LL DR
Sbjct: 190 LITAVLLLLTLPVLSAGVTMLLLDR 214
Score = 48.4 bits (110), Expect = 2e-04
Identities = 20/26 (76%), Positives = 22/26 (84%)
Frame = +3
Query: 255 NLXTSFFDPAGGGDPILYQHLF*FFG 332
N TSFF+ AGGGDPILY+HLF FFG
Sbjct: 215 NFNTSFFEVAGGGDPILYEHLFWFFG 240
>UniRef50_Q36097 Cluster: Cytochrome c oxidase subunit 1; n=3;
Theileria|Rep: Cytochrome c oxidase subunit 1 -
Theileria parva
Length = 481
Score = 74.5 bits (175), Expect = 2e-12
Identities = 31/43 (72%), Positives = 37/43 (86%)
Frame = +3
Query: 264 TSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIIS 392
T FF+ + GDP+LYQHLF FFGHPEVYI+ILPGFGIIS ++S
Sbjct: 223 TMFFESSNSGDPVLYQHLFWFFGHPEVYIMILPGFGIISLLLS 265
Score = 43.2 bits (97), Expect = 0.006
Identities = 26/85 (30%), Positives = 42/85 (49%)
Frame = +1
Query: 1 YPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AV 180
YPPLS+++++ G +D IF L AGI+S D++ ++
Sbjct: 137 YPPLSTSLSNVG--IDFIIFGLLAAGIASTLSSVNFITTFTSVKTIGFVIDRISPAAWSI 194
Query: 181 GITAFLLXLSLPVLAGAITILLTDR 255
+T+FLL LSLPV+ ++ DR
Sbjct: 195 VLTSFLLLLSLPVVTAVFLMVFLDR 219
>UniRef50_Q0I8U1 Cluster: Cytochrome c oxidase subunit I; n=16;
Bacteria|Rep: Cytochrome c oxidase subunit I -
Synechococcus sp. (strain CC9311)
Length = 564
Score = 74.1 bits (174), Expect = 3e-12
Identities = 37/90 (41%), Positives = 46/90 (51%)
Frame = +3
Query: 264 TSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIISXERGKKETFXXXXXXXX 443
TSFF P GGGDP+L+QH F F+ HP VY+L+LP FGI S + +K F
Sbjct: 243 TSFFRPEGGGDPVLFQHFFWFYSHPAVYVLVLPVFGIFSELFPV-YARKPLFGYRFVAIA 301
Query: 444 XXXXXXXXFIV*AHHIFTVGIELVHEHILL 533
IV AHH+F G HI +
Sbjct: 302 SFGITFLSLIVWAHHMFYTGTPNWMRHIFM 331
>UniRef50_Q6RJT8 Cluster: Cytochrome c oxidase subunit 2; n=1;
Harmonia axyridis|Rep: Cytochrome c oxidase subunit 2 -
Harmonia axyridis (Multicolored Asian lady beetle)
Length = 193
Score = 73.7 bits (173), Expect = 4e-12
Identities = 30/57 (52%), Positives = 36/57 (63%)
Frame = +2
Query: 311 TFILIFWTS*SLYFNFTRIWYNFSYYFTRKRKKRNFWLFRNNLCYTSNWVIRIYCLS 481
+ ++IFW+S SLYFN IWYNF YY+T K K W F NNLCY S W I +S
Sbjct: 2 SLVMIFWSSSSLYFNSPSIWYNFPYYYTSKSGKNCLWFFSNNLCYISYWTSSICSMS 58
>UniRef50_P24010 Cluster: Cytochrome c oxidase subunit 1 (EC
1.9.3.1) (Cytochrome c oxidase polypeptide I)
(Cytochrome aa3 subunit 1) (Caa-3605 subunit 1) (Oxidase
aa(3) subunit 1); n=13; Bacillaceae|Rep: Cytochrome c
oxidase subunit 1 (EC 1.9.3.1) (Cytochrome c oxidase
polypeptide I) (Cytochrome aa3 subunit 1) (Caa-3605
subunit 1) (Oxidase aa(3) subunit 1) - Bacillus subtilis
Length = 622
Score = 73.3 bits (172), Expect = 5e-12
Identities = 35/81 (43%), Positives = 47/81 (58%)
Frame = +3
Query: 264 TSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIISXERGKKETFXXXXXXXX 443
T+FF+P GG+ ++++HLF FGHPEVYILILP FGI S +I +K F
Sbjct: 226 TNFFNPELGGNTVIWEHLFWIFGHPEVYILILPAFGIFSEVIPV-FARKRLFGYSSMVFA 284
Query: 444 XXXXXXXXFIV*AHHIFTVGI 506
F+V HH+FT G+
Sbjct: 285 IVLIGFLGFMVWVHHMFTTGL 305
>UniRef50_P98000 Cluster: Alternative cytochrome c oxidase subunit 1
(EC 1.9.3.1) (Alternative cytochrome c oxidase
polypeptide I) (Cytochrome BB3 subunit 1) (Oxidase BB(3)
subunit 1); n=25; Bacteria|Rep: Alternative cytochrome c
oxidase subunit 1 (EC 1.9.3.1) (Alternative cytochrome c
oxidase polypeptide I) (Cytochrome BB3 subunit 1)
(Oxidase BB(3) subunit 1) - Bradyrhizobium japonicum
Length = 591
Score = 72.9 bits (171), Expect = 6e-12
Identities = 34/74 (45%), Positives = 44/74 (59%)
Frame = +3
Query: 285 GGGDPILYQHLF*FFGHPEVYILILPGFGIISHIISXERGKKETFXXXXXXXXXXXXXXX 464
GGG P+L+QHLF FFGHPEVYI+ LP FGI+S +IS +K F
Sbjct: 264 GGGSPLLFQHLFWFFGHPEVYIVALPAFGIVSDLIS-THARKNIFGYRMMVWAIVAIGAL 322
Query: 465 XFIV*AHHIFTVGI 506
F+V AHH++ G+
Sbjct: 323 SFVVWAHHMYVSGM 336
>UniRef50_Q9XKD7 Cluster: Cytochrome c oxidase subunit I; n=1;
Dicyema misakiense|Rep: Cytochrome c oxidase subunit I -
Dicyema misakiense
Length = 473
Score = 72.5 bits (170), Expect = 8e-12
Identities = 36/91 (39%), Positives = 49/91 (53%)
Frame = +3
Query: 240 IINRSNLXTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIISXERGKKETF 419
I+ +L T F+D GGDP+LYQHLF FFGHPEVY++ILP FG+ S I
Sbjct: 193 ILTDKHLGTCFYDATMGGDPLLYQHLFWFFGHPEVYVVILPVFGLFSSSIQLS-SLHRIP 251
Query: 420 XXXXXXXXXXXXXXXXFIV*AHHIFTVGIEL 512
+V AHH++T G+++
Sbjct: 252 GELSLVLAMASIALIGSVVWAHHMYTAGLDI 282
Score = 50.4 bits (115), Expect = 4e-05
Identities = 34/85 (40%), Positives = 46/85 (54%)
Frame = +1
Query: 1 YPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AV 180
YPPLSS SV+ ++FSLHLAGI+S + L LF ++
Sbjct: 119 YPPLSS----LSPSVEFSVFSLHLAGIASLISSCNFLVTMLATRTSL--WYSLSLFCWSI 172
Query: 181 GITAFLLXLSLPVLAGAITILLTDR 255
+ + LL LSLPVLA IT++LTD+
Sbjct: 173 VLVSLLLVLSLPVLAVGITLILTDK 197
>UniRef50_Q34463 Cluster: Cytochrome oxidase subunit I; n=3; Euglena
gracilis|Rep: Cytochrome oxidase subunit I - Euglena
gracilis
Length = 495
Score = 72.1 bits (169), Expect = 1e-11
Identities = 36/86 (41%), Positives = 52/86 (60%)
Frame = +3
Query: 255 NLXTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIISXERGKKETFXXXXX 434
N+ ++ +D G DP+LYQHLF FFGHPEVY++ILP FG+ S I++ K+ F
Sbjct: 226 NINSTIYDVIG--DPVLYQHLFWFFGHPEVYVIILPVFGLTSLILT-SIIHKDIFGREGM 282
Query: 435 XXXXXXXXXXXFIV*AHHIFTVGIEL 512
+ V AHH+FTVG+++
Sbjct: 283 MYCIISIGVVGYFVWAHHMFTVGLDI 308
Score = 46.4 bits (105), Expect = 6e-04
Identities = 29/86 (33%), Positives = 45/86 (52%), Gaps = 1/86 (1%)
Frame = +1
Query: 1 YPPLSSNIAHR-GRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*A 177
YPPLS+ A G ++DL++ +H+ GISS +F + ++ +
Sbjct: 140 YPPLSTRDADNIGVNIDLSLLVVHVLGISSTIGSVNYITTNKYNRHVGLTFMNINIYNFS 199
Query: 178 VGITAFLLXLSLPVLAGAITILLTDR 255
+ +T+ LL SLP+L AIT LL DR
Sbjct: 200 IIVTSILLIGSLPILGVAITGLLLDR 225
>UniRef50_Q0H8Y0 Cluster: Probable intron-encoded endonuclease aI4
precursor [Contains: Truncated non-functional cytochrome
oxidase 1; Intron-encoded endonuclease aI4 (EC
3.1.-.-)]; n=3; Basidiomycota|Rep: Probable
intron-encoded endonuclease aI4 precursor [Contains:
Truncated non-functional cytochrome oxidase 1;
Intron-encoded endonuclease aI4 (EC 3.1.-.-)] - Ustilago
maydis (Smut fungus)
Length = 530
Score = 72.1 bits (169), Expect = 1e-11
Identities = 40/76 (52%), Positives = 46/76 (60%)
Frame = +1
Query: 1 YPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AV 180
YPPLS +H G SVDLAIFSLHL+GISS + +LPLFV A+
Sbjct: 129 YPPLSGLQSHSGGSVDLAIFSLHLSGISSMLGAMNFITTVLNMRNPGMTLHKLPLFVWAI 188
Query: 181 GITAFLLXLSLPVLAG 228
+TA LL LSLPVLAG
Sbjct: 189 FVTAILLLLSLPVLAG 204
>UniRef50_Q18JR5 Cluster: Cytochrome-c-like terminal oxidase,
subunit I; n=2; Halobacteriaceae|Rep: Cytochrome-c-like
terminal oxidase, subunit I - Haloquadratum walsbyi
(strain DSM 16790)
Length = 634
Score = 71.7 bits (168), Expect = 1e-11
Identities = 39/85 (45%), Positives = 49/85 (57%)
Frame = +3
Query: 255 NLXTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIISXERGKKETFXXXXX 434
N TSFF AG G IL+QHLF FFGHPEVYI++LP GIIS+I+ G++ F
Sbjct: 301 NFGTSFF--AGEGGAILWQHLFWFFGHPEVYIIVLPPMGIISYILPRFSGRR-LFGFKFV 357
Query: 435 XXXXXXXXXXXFIV*AHHIFTVGIE 509
F V AHH+F G++
Sbjct: 358 VYSTLAIGVLSFGVWAHHMFATGLD 382
Score = 34.3 bits (75), Expect = 2.7
Identities = 27/90 (30%), Positives = 40/90 (44%), Gaps = 5/90 (5%)
Frame = +1
Query: 1 YPPLS-----SNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPL 165
Y PLS N A+ G VDL + LHL+G+S+ S+ L +
Sbjct: 213 YTPLSVGEGMGNQANAG--VDLMLLGLHLSGVSATMGSINFIATIFTERGKNVSWANLDI 270
Query: 166 FV*AVGITAFLLXLSLPVLAGAITILLTDR 255
F + + L+ + P+L AI +LL DR
Sbjct: 271 FSWTILTQSGLILFAFPLLGSAIMMLLFDR 300
>UniRef50_Q1CZF1 Cluster: Cytochrome c oxidase, subunit I; n=1;
Myxococcus xanthus DK 1622|Rep: Cytochrome c oxidase,
subunit I - Myxococcus xanthus (strain DK 1622)
Length = 556
Score = 71.3 bits (167), Expect = 2e-11
Identities = 31/77 (40%), Positives = 43/77 (55%)
Frame = +3
Query: 273 FDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIISXERGKKETFXXXXXXXXXXX 452
FDPA GGDP+L+QHLF F+ HP VYI++LP FG++S +++ +K F
Sbjct: 246 FDPARGGDPVLFQHLFWFYSHPAVYIMVLPSFGVMSEVVA-TYSRKNIFGYRAVAYSSLG 304
Query: 453 XXXXXFIV*AHHIFTVG 503
F HH+F G
Sbjct: 305 IAFVGFFAWGHHMFVSG 321
>UniRef50_P11947 Cluster: Cytochrome c oxidase subunit 1; n=48;
Oligohymenophorea|Rep: Cytochrome c oxidase subunit 1 -
Tetrahymena pyriformis
Length = 698
Score = 70.9 bits (166), Expect = 3e-11
Identities = 34/82 (41%), Positives = 47/82 (57%)
Frame = +3
Query: 264 TSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIISXERGKKETFXXXXXXXX 443
T+FF+ A GGDPIL QHLF FFGHPEVY+LI+P FG I+ I+ +
Sbjct: 378 TTFFEYAYGGDPILSQHLFWFFGHPEVYVLIIPTFGFINMIV-PHNNTRRVASKHHMIWA 436
Query: 444 XXXXXXXXFIV*AHHIFTVGIE 509
++V HH++ VG++
Sbjct: 437 IYVMAYMGYLVWGHHMYLVGLD 458
>UniRef50_Q67ML1 Cluster: Cytochrome C oxidase subunit I; n=17;
Bacteria|Rep: Cytochrome C oxidase subunit I -
Symbiobacterium thermophilum
Length = 628
Score = 70.1 bits (164), Expect = 5e-11
Identities = 36/80 (45%), Positives = 44/80 (55%)
Frame = +3
Query: 267 SFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIISXERGKKETFXXXXXXXXX 446
+FF+ GG + YQHLF FGHPEVYILILP GIIS +I +K F
Sbjct: 238 NFFEVLRGGSVVFYQHLFWTFGHPEVYILILPAMGIISEVIPV-HARKMLFGYSVMVFST 296
Query: 447 XXXXXXXFIV*AHHIFTVGI 506
F V +HH+FTVG+
Sbjct: 297 ALIGFMGFTVWSHHMFTVGM 316
>UniRef50_Q98P35 Cluster: Cytochrome C oxidase subunit I; n=16;
cellular organisms|Rep: Cytochrome C oxidase subunit I -
Rhizobium loti (Mesorhizobium loti)
Length = 623
Score = 69.3 bits (162), Expect = 8e-11
Identities = 34/86 (39%), Positives = 48/86 (55%)
Frame = +3
Query: 264 TSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIISXERGKKETFXXXXXXXX 443
T FF+PA GGD +L+QHLF FFGHPEVYI+ LP G++S I++ ++ F
Sbjct: 233 THFFNPAEGGDVLLWQHLFWFFGHPEVYIIFLPAVGMVSSIVATFT-QRPVFGYLAMVMA 291
Query: 444 XXXXXXXXFIV*AHHIFTVGIELVHE 521
F + HH+F G+ + E
Sbjct: 292 LIATGVLAFGLWVHHMFVAGLPRLGE 317
Score = 39.9 bits (89), Expect = 0.055
Identities = 25/91 (27%), Positives = 41/91 (45%)
Frame = +1
Query: 1 YPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AV 180
Y PLS G+ D+ + +S+ S D++PLFV ++
Sbjct: 145 YVPLSGPQYAAGKRADIWAQMITFTEVSALAIAVEIVVTVFKQRAPGMSLDRIPLFVWSM 204
Query: 181 GITAFLLXLSLPVLAGAITILLTDRTXIHHF 273
+T+FL+ L++P + A T L+ DR HF
Sbjct: 205 LVTSFLVILAMPAIMIASTSLILDRLVGTHF 235
>UniRef50_Q8ZXD1 Cluster: Cytochrome C oxidase subunit I /III; n=4;
cellular organisms|Rep: Cytochrome C oxidase subunit I
/III - Pyrobaculum aerophilum
Length = 800
Score = 68.9 bits (161), Expect = 1e-10
Identities = 31/74 (41%), Positives = 41/74 (55%)
Frame = +3
Query: 276 DPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIISXERGKKETFXXXXXXXXXXXX 455
DPA GDP L+QH+F FFGHPEVYIL+LP G++S +I ++ +
Sbjct: 231 DPAASGDPRLFQHIFWFFGHPEVYILVLPAMGLVSEVIQ-RMARRRAYGYTAIAISSVAI 289
Query: 456 XXXXFIV*AHHIFT 497
F V HH+FT
Sbjct: 290 ASISFAVWMHHMFT 303
Score = 34.7 bits (76), Expect = 2.1
Identities = 27/92 (29%), Positives = 39/92 (42%), Gaps = 1/92 (1%)
Frame = +1
Query: 1 YPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AV 180
YPPLS+ + VDL + + +AG SS + LF +V
Sbjct: 136 YPPLST--ISKSIGVDLILLGIIIAGFSSTLTGINFILTITRLRRPDIKMLDMSLFAWSV 193
Query: 181 GITAFLLXLSLPVL-AGAITILLTDRTXIHHF 273
+ L+ +LP L AGAI +LL +H F
Sbjct: 194 LAASMLMVTALPPLAAGAIMLLLERHLGMHFF 225
>UniRef50_A7H8L4 Cluster: Cytochrome c oxidase subunit I type; n=38;
Bacteria|Rep: Cytochrome c oxidase subunit I type -
Anaeromyxobacter sp. Fw109-5
Length = 555
Score = 68.5 bits (160), Expect = 1e-10
Identities = 33/94 (35%), Positives = 46/94 (48%)
Frame = +3
Query: 273 FDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIISXERGKKETFXXXXXXXXXXX 452
FDPA GGDP+L+QH F F+ HP VYI++LP +IS ++ +K F
Sbjct: 239 FDPARGGDPVLFQHFFWFYSHPAVYIMVLPAMAVISEVV-CAFSRKNIFGYKAVAYSSLG 297
Query: 453 XXXXXFIV*AHHIFTVGIELVHEHILLQLLEFIG 554
F HH+FT G + + L F+G
Sbjct: 298 IAFVGFFTWGHHMFTSGQSAFNGGVFGVLSMFVG 331
>UniRef50_A6BM65 Cluster: Cytochrome oxidase subunit I; n=1;
Periclimenes thermohydrophilus|Rep: Cytochrome oxidase
subunit I - Periclimenes thermohydrophilus
Length = 217
Score = 68.1 bits (159), Expect = 2e-10
Identities = 41/84 (48%), Positives = 48/84 (57%)
Frame = -1
Query: 254 RSVNNIVIAPAKTGSDNXNKNAVIPTAHTNKGN*SNDILFNRXXXXXXXXXXXXXIDEIP 75
RSV +IVIAPA TGS++ +K AV T TN G S I +R I+E P
Sbjct: 22 RSVKSIVIAPASTGSESNSKMAVSNTDQTNSGMRSMVIPADRMLITVVMKFTAPKIEETP 81
Query: 74 AKCSEKIARSTDLPLCAILDESGG 3
AKC+EKI STD P CAI SGG
Sbjct: 82 AKCNEKIPMSTDAPACAIPLASGG 105
Score = 36.7 bits (81), Expect = 0.51
Identities = 16/22 (72%), Positives = 18/22 (81%)
Frame = -2
Query: 319 NKC*YKIGSPPPAGSKNDVXKF 254
NKC + IGSPPPAGSK +V KF
Sbjct: 1 NKC-WSIGSPPPAGSKKEVFKF 21
>UniRef50_A1ZL77 Cluster: Alternative Cytochrome c oxidase
polypeptide I (Cytochrome BB3 subunit 1) (Oxidase BB(3)
subunit 1); n=20; cellular organisms|Rep: Alternative
Cytochrome c oxidase polypeptide I (Cytochrome BB3
subunit 1) (Oxidase BB(3) subunit 1) - Microscilla
marina ATCC 23134
Length = 635
Score = 66.5 bits (155), Expect = 6e-10
Identities = 31/73 (42%), Positives = 41/73 (56%)
Frame = +3
Query: 288 GGDPILYQHLF*FFGHPEVYILILPGFGIISHIISXERGKKETFXXXXXXXXXXXXXXXX 467
GG P+L+QHLF F GHPEVYI+++P GI S +I+ +K F
Sbjct: 287 GGSPVLFQHLFWFLGHPEVYIVLIPALGITSEVIA-TNARKPIFGYKAMIGSILGIAVLS 345
Query: 468 FIV*AHHIFTVGI 506
FIV AHH+F G+
Sbjct: 346 FIVWAHHMFVTGM 358
Score = 36.3 bits (80), Expect = 0.68
Identities = 28/89 (31%), Positives = 41/89 (46%), Gaps = 3/89 (3%)
Frame = +1
Query: 1 YPPLSS---NIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV 171
YPPLS+ ++ G + + + S+ L IS SF +LPL +
Sbjct: 178 YPPLSALPQAMSGSGAGMTMWLISMALFIISVLLGGINYITTVINLRVKGMSFTRLPLTI 237
Query: 172 *AVGITAFLLXLSLPVLAGAITILLTDRT 258
A ITA + LS PVL A +L+ DR+
Sbjct: 238 WAFFITAIIGLLSFPVLFSAALLLIFDRS 266
>UniRef50_Q6TP93 Cluster: Cytochrome c oxidase subunit I; n=2;
Bruchidius|Rep: Cytochrome c oxidase subunit I -
Bruchidius aff. varius GLK-2003
Length = 339
Score = 66.5 bits (155), Expect = 6e-10
Identities = 32/58 (55%), Positives = 38/58 (65%)
Frame = +3
Query: 339 EVYILILPGFGIISHIISXERGKKETFXXXXXXXXXXXXXXXXFIV*AHHIFTVGIEL 512
EVYILILPGFG+ISHIIS E GKKE F F+V AHH+FTVG+++
Sbjct: 155 EVYILILPGFGMISHIISQESGKKEAFGTLGMIYAMMAIGLLGFVVWAHHMFTVGMDV 212
Score = 34.3 bits (75), Expect = 2.7
Identities = 19/35 (54%), Positives = 21/35 (60%)
Frame = +2
Query: 509 IGTRAYFTSATRIYWLYQQELKFLG*LATIHGTQI 613
+ TRAYFTSAT I +K LAT HGTQI
Sbjct: 212 VDTRAYFTSATMII-AVPTGIKVFSWLATFHGTQI 245
>UniRef50_Q79VD7 Cluster: Cytochrome c oxidase subunit 1; n=93;
Actinobacteria (class)|Rep: Cytochrome c oxidase subunit
1 - Corynebacterium glutamicum (Brevibacterium flavum)
Length = 584
Score = 66.5 bits (155), Expect = 6e-10
Identities = 36/81 (44%), Positives = 44/81 (54%)
Frame = +3
Query: 273 FDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIISXERGKKETFXXXXXXXXXXX 452
+DPA GG +L+QHLF FFGHPEVY+L LP FGI+S II +K F
Sbjct: 246 YDPANGGS-LLWQHLFWFFGHPEVYVLALPFFGIVSEIIPV-FSRKPMFGYVGLIFATLS 303
Query: 453 XXXXXFIV*AHHIFTVGIELV 515
V AHH+F G L+
Sbjct: 304 IGALSMAVWAHHMFVTGAVLL 324
>UniRef50_O67935 Cluster: Cytochrome c oxidase subunit I; n=1;
Aquifex aeolicus|Rep: Cytochrome c oxidase subunit I -
Aquifex aeolicus
Length = 485
Score = 65.7 bits (153), Expect = 1e-09
Identities = 31/83 (37%), Positives = 45/83 (54%)
Frame = +3
Query: 258 LXTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIISXERGKKETFXXXXXX 437
L T+FF+PA GGDP++YQ++F F+ HP VY+ +LP FG S II ++ F
Sbjct: 171 LGTNFFNPAKGGDPLIYQNIFWFYSHPVVYVQVLPVFGFYSEIIPV-FARRPLFGYTSMV 229
Query: 438 XXXXXXXXXXFIV*AHHIFTVGI 506
F + HH+F G+
Sbjct: 230 FAVWAITAVSFFLWIHHMFVSGV 252
Score = 33.9 bits (74), Expect = 3.6
Identities = 24/85 (28%), Positives = 36/85 (42%)
Frame = +1
Query: 1 YPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AV 180
YPP S N + L +F +HL G SS +F + LFV +
Sbjct: 87 YPPFSLN--NDAGVTALYVFVMHLLGASSIATAVNFLVTYITMRAPGYTFFKTNLFVHTL 144
Query: 181 GITAFLLXLSLPVLAGAITILLTDR 255
+ + +P LAGA+T+L D+
Sbjct: 145 IAANVIQLVGVPSLAGAVTMLFLDK 169
>UniRef50_P39481 Cluster: Quinol oxidase subunit 1/3; n=5;
Sulfolobaceae|Rep: Quinol oxidase subunit 1/3 -
Sulfolobus acidocaldarius
Length = 788
Score = 65.7 bits (153), Expect = 1e-09
Identities = 29/52 (55%), Positives = 38/52 (73%)
Frame = +3
Query: 264 TSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIISXERGKKETF 419
T FFD A GG P+L+Q LF FFGHPEVYILILP G++S ++ + ++E F
Sbjct: 215 TPFFDSALGGSPVLWQQLFWFFGHPEVYILILPAMGLVSELL-PKMARREIF 265
>UniRef50_Q1IUK7 Cluster: Cytochrome-c oxidase; n=2;
Acidobacteria|Rep: Cytochrome-c oxidase - Acidobacteria
bacterium (strain Ellin345)
Length = 595
Score = 65.3 bits (152), Expect = 1e-09
Identities = 31/76 (40%), Positives = 41/76 (53%)
Frame = +3
Query: 279 PAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIISXERGKKETFXXXXXXXXXXXXX 458
P GGG +L+QHLF FFGHPEVYI ILP GI+SHI+ ++
Sbjct: 270 PHGGGSALLWQHLFWFFGHPEVYIAILPAMGIVSHILINSM-RRPLLSHRVVIGSMISIG 328
Query: 459 XXXFIV*AHHIFTVGI 506
++V HH+F G+
Sbjct: 329 FLSYVVWGHHMFVSGM 344
>UniRef50_P34956 Cluster: Quinol oxidase subunit 1 (EC 1.10.3.-)
(Quinol oxidase polypeptide I) (Quinol oxidase aa3-600,
subunit qoxB) (Oxidase aa(3)-600 subunit 1); n=45;
Bacillales|Rep: Quinol oxidase subunit 1 (EC 1.10.3.-)
(Quinol oxidase polypeptide I) (Quinol oxidase aa3-600,
subunit qoxB) (Oxidase aa(3)-600 subunit 1) - Bacillus
subtilis
Length = 649
Score = 65.3 bits (152), Expect = 1e-09
Identities = 34/78 (43%), Positives = 43/78 (55%)
Frame = +3
Query: 270 FFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIISXERGKKETFXXXXXXXXXX 449
FF GG P+L+ +LF +GHPEVYI+ILP FGI S IIS +K+ F
Sbjct: 259 FFTLEAGGMPMLWANLFWIWGHPEVYIVILPAFGIFSEIIS-SFARKQLFGYKAMVGSII 317
Query: 450 XXXXXXFIV*AHHIFTVG 503
F+V HH FT+G
Sbjct: 318 AISVLSFLVWTHHFFTMG 335
Score = 37.5 bits (83), Expect = 0.29
Identities = 24/94 (25%), Positives = 38/94 (40%)
Frame = +1
Query: 1 YPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AV 180
Y PL+SN G + + L +AGI + + ++P+F
Sbjct: 169 YMPLASNDMSPGPGENYYLLGLQIAGIGTLMTGINFMVTILKMRTKGMTLMRMPMFTWTT 228
Query: 181 GITAFLLXLSLPVLAGAITILLTDRTXIHHFLIL 282
IT ++ + PVL A+ +L DR HF L
Sbjct: 229 LITMVIIVFAFPVLTVALALLSFDRLFGAHFFTL 262
>UniRef50_P98005 Cluster: Cytochrome c oxidase polypeptide I+III (EC
1.9.3.1) (Cytochrome c aa(3) subunit 1); n=2; Thermus
thermophilus|Rep: Cytochrome c oxidase polypeptide I+III
(EC 1.9.3.1) (Cytochrome c aa(3) subunit 1) - Thermus
thermophilus (strain HB8 / ATCC 27634 / DSM 579)
Length = 791
Score = 65.3 bits (152), Expect = 1e-09
Identities = 31/88 (35%), Positives = 48/88 (54%)
Frame = +3
Query: 240 IINRSNLXTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIISXERGKKETF 419
++ + S+F+PA GGDP+L+Q F F+ HP VY+++LP GI++ + S +K F
Sbjct: 219 VLLERKIGLSWFNPAVGGDPVLFQQFFWFYSHPTVYVMLLPYLGILAEVAS-TFARKPLF 277
Query: 420 XXXXXXXXXXXXXXXXFIV*AHHIFTVG 503
+V AHH+FTVG
Sbjct: 278 GYRQMVWAQMGIVVLGTMVWAHHMFTVG 305
>UniRef50_A0VUI8 Cluster: Cytochrome-c oxidase; n=1; Dinoroseobacter
shibae DFL 12|Rep: Cytochrome-c oxidase -
Dinoroseobacter shibae DFL 12
Length = 853
Score = 64.9 bits (151), Expect = 2e-09
Identities = 33/86 (38%), Positives = 46/86 (53%)
Frame = +3
Query: 258 LXTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIISXERGKKETFXXXXXX 437
L FFD GGDP+L+QHLF FGHPEVYI+ LP G+++ ++ G K F
Sbjct: 257 LGLPFFDHTLGGDPLLWQHLFWLFGHPEVYIIFLPAAGMVATMLPTFVG-KPLFGYGFAV 315
Query: 438 XXXXXXXXXXFIV*AHHIFTVGIELV 515
F + AHH+F G+ ++
Sbjct: 316 AAVVTMSFLSFGLWAHHMFATGLPIL 341
>UniRef50_Q9B6E6 Cluster: COX1-i5 protein; n=3; Fungi/Metazoa
group|Rep: COX1-i5 protein - Yarrowia lipolytica
(Candida lipolytica)
Length = 608
Score = 64.9 bits (151), Expect = 2e-09
Identities = 37/85 (43%), Positives = 47/85 (55%)
Frame = +1
Query: 1 YPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AV 180
Y PL+ +H G +VDLAIFSLHL+G SS ++ +PLF AV
Sbjct: 135 YFPLAGIQSHSGPAVDLAIFSLHLSGFSSLLGAINFITTFINMRTIGMKYENVPLFAWAV 194
Query: 181 GITAFLLXLSLPVLAGAITILLTDR 255
TA LL LSLPVLA +T+ + DR
Sbjct: 195 LFTAILLLLSLPVLAAGLTMGIFDR 219
Score = 51.6 bits (118), Expect = 2e-05
Identities = 22/35 (62%), Positives = 27/35 (77%)
Frame = +3
Query: 255 NLXTSFFDPAGGGDPILYQHLF*FFGHPEVYILIL 359
N TSFF+ AGGGD +LYQHLF ++ HPEV I+ L
Sbjct: 220 NFNTSFFEYAGGGDAVLYQHLFYWWNHPEVKIICL 254
>UniRef50_A3ZTG1 Cluster: Cytochrome c oxidase subunit I; n=1;
Blastopirellula marina DSM 3645|Rep: Cytochrome c
oxidase subunit I - Blastopirellula marina DSM 3645
Length = 595
Score = 64.1 bits (149), Expect = 3e-09
Identities = 31/75 (41%), Positives = 42/75 (56%)
Frame = +3
Query: 282 AGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIISXERGKKETFXXXXXXXXXXXXXX 461
AGGG P+L+QHLF F+ HP VYI+ILP G++S I++ +K F
Sbjct: 272 AGGGQPLLWQHLFWFYSHPAVYIMILPAMGMVSDILAC-FSRKPIFGYKPMVYSICGIAG 330
Query: 462 XXFIV*AHHIFTVGI 506
FIV HH+F G+
Sbjct: 331 LGFIVWGHHMFVSGM 345
Score = 35.1 bits (77), Expect = 1.6
Identities = 26/88 (29%), Positives = 39/88 (44%), Gaps = 3/88 (3%)
Frame = +1
Query: 1 YPPLS---SNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV 171
YPPLS ++ G + L + + G+SS + +LPL +
Sbjct: 164 YPPLSDMTTSAPSSGAAQTLWLLGVTTVGVSSMLGSVNYMTTIIQMRAPGMTMFRLPLTI 223
Query: 172 *AVGITAFLLXLSLPVLAGAITILLTDR 255
A+ ITA L +LPVL A ++L DR
Sbjct: 224 WAMFITALLQAFALPVLTAAGFMMLADR 251
>UniRef50_Q11EK8 Cluster: Cytochrome c oxidase, subunit I; n=5;
Proteobacteria|Rep: Cytochrome c oxidase, subunit I -
Mesorhizobium sp. (strain BNC1)
Length = 845
Score = 63.7 bits (148), Expect = 4e-09
Identities = 32/79 (40%), Positives = 41/79 (51%)
Frame = +3
Query: 270 FFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIISXERGKKETFXXXXXXXXXX 449
FF GGDP+L+QHLF FFGHPEVYI+ LP G++S I+ +
Sbjct: 245 FFTAERGGDPLLWQHLFWFFGHPEVYIIFLPAAGLVSMIV-PTMARHPLVGYRLIVVALI 303
Query: 450 XXXXXXFIV*AHHIFTVGI 506
F + HH+FT GI
Sbjct: 304 GTGFFSFGLWVHHMFTTGI 322
>UniRef50_Q9YDX6 Cluster: Heme-copper oxidase subunit I+III; n=1;
Aeropyrum pernix|Rep: Heme-copper oxidase subunit I+III
- Aeropyrum pernix
Length = 815
Score = 63.7 bits (148), Expect = 4e-09
Identities = 35/87 (40%), Positives = 46/87 (52%), Gaps = 1/87 (1%)
Frame = +3
Query: 255 NLXTSFF-DPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIISXERGKKETFXXXX 431
NL T FF +PAGG +L+ HLF FFGHPEVYIL+ P G ++ +IS G K +
Sbjct: 223 NLGTEFFLNPAGGA--LLWDHLFWFFGHPEVYILLFPALGAMADVISTFSG-KPIYAKRY 279
Query: 432 XXXXXXXXXXXXFIV*AHHIFTVGIEL 512
F+V HH+F G +
Sbjct: 280 ILTAFLIATIISFVVWMHHMFITGTNI 306
>UniRef50_Q1H1C1 Cluster: Cytochrome-c oxidase; n=1; Methylobacillus
flagellatus KT|Rep: Cytochrome-c oxidase -
Methylobacillus flagellatus (strain KT / ATCC 51484 /
DSM 6875)
Length = 631
Score = 63.3 bits (147), Expect = 5e-09
Identities = 32/78 (41%), Positives = 42/78 (53%)
Frame = +3
Query: 273 FDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIISXERGKKETFXXXXXXXXXXX 452
F A GDPIL+QHLF FFGHPEVYI+ +P G++S II ++ F
Sbjct: 242 FFTAASGDPILWQHLFWFFGHPEVYIIFIPALGMVSSII-ITFTQRPIFGYIPIVLSIVA 300
Query: 453 XXXXXFIV*AHHIFTVGI 506
F + HH+FT G+
Sbjct: 301 IGFIGFGLWVHHMFTAGL 318
Score = 35.1 bits (77), Expect = 1.6
Identities = 24/91 (26%), Positives = 38/91 (41%)
Frame = +1
Query: 1 YPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AV 180
YPPL+ G +D + IS+ S +++P+FV AV
Sbjct: 152 YPPLAGASFSPGLGLDFYTTVVTFMEISALVAAIELIATIFKCKVPGMSLNRMPIFVWAV 211
Query: 181 GITAFLLXLSLPVLAGAITILLTDRTXIHHF 273
+ +F++ +LP L A +L DR HF
Sbjct: 212 LVMSFMIVFALPPLVIASLMLALDRMAGMHF 242
>UniRef50_Q7NQZ0 Cluster: Cytochrome o ubiquinol oxidase, subunit I;
n=22; Bacteria|Rep: Cytochrome o ubiquinol oxidase,
subunit I - Chromobacterium violaceum
Length = 680
Score = 62.9 bits (146), Expect = 7e-09
Identities = 32/78 (41%), Positives = 43/78 (55%)
Frame = +3
Query: 270 FFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIISXERGKKETFXXXXXXXXXX 449
FF GG+ ++Y +LF +GHPEVYIL+LP FGI S ++S GK+ F
Sbjct: 264 FFTAELGGNAMMYLNLFWAWGHPEVYILVLPAFGIFSEVVSTFAGKR-LFGHKSMIYASG 322
Query: 450 XXXXXXFIV*AHHIFTVG 503
F+V HH FT+G
Sbjct: 323 AISVLGFMVWLHHFFTMG 340
Score = 37.5 bits (83), Expect = 0.29
Identities = 26/106 (24%), Positives = 40/106 (37%), Gaps = 1/106 (0%)
Frame = +1
Query: 1 YPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AV 180
YPPL+ VD I++L ++GI + +P+F
Sbjct: 174 YPPLAELGFSPDVGVDYYIWALQISGIGTTLTAINFLVTVIKMRAPGMKLMDMPIFTWTC 233
Query: 181 GITAFLLXLSLPVLAGAITILLTDR-TXIHHFLILLEEETQFYINI 315
L+ S P+L GA+ +L DR H F L Y+N+
Sbjct: 234 TWANVLIATSFPILTGALAMLALDRYLDFHFFTAELGGNAMMYLNL 279
>UniRef50_A7HEB5 Cluster: Cytochrome-c oxidase; n=2;
Cystobacterineae|Rep: Cytochrome-c oxidase -
Anaeromyxobacter sp. Fw109-5
Length = 596
Score = 62.9 bits (146), Expect = 7e-09
Identities = 34/84 (40%), Positives = 46/84 (54%), Gaps = 1/84 (1%)
Frame = +3
Query: 285 GGGDPILYQHLF*FFGHPEVYILILPGFGIISHIISXERGKKETFXXXXXXXXXXXXXXX 464
GGGDPIL+QHLF FGHPEVYI+ILP +GI+ ++S +K
Sbjct: 262 GGGDPILWQHLFWIFGHPEVYIMILPAWGILGDVLSF-FARKPHHWYRGTVWAMVLVTVL 320
Query: 465 XFIV*AHHIFTVGIE-LVHEHILL 533
+V HH+F G+ L+ E +L
Sbjct: 321 SAMVYGHHMFMTGMSPLLGEGFML 344
Score = 45.2 bits (102), Expect = 0.001
Identities = 26/93 (27%), Positives = 43/93 (46%)
Frame = +1
Query: 1 YPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AV 180
Y PLS+N+ G L + ++ + G+SS ++ +LPL + +
Sbjct: 162 YTPLSTNVGMPGMGQTLVVAAIFVTGVSSTMGAVNYITTVIRLRAPGMTYMRLPLTIWGL 221
Query: 181 GITAFLLXLSLPVLAGAITILLTDRTXIHHFLI 279
+TA L L +PVL A +LL DR+ F +
Sbjct: 222 WLTAILNALFVPVLGSAALLLLLDRSFGTEFFV 254
>UniRef50_A0RZ19 Cluster: Heme/copper-type cytochrome/quinol
oxidase, subunit 1; n=2; Thermoprotei|Rep:
Heme/copper-type cytochrome/quinol oxidase, subunit 1 -
Cenarchaeum symbiosum
Length = 508
Score = 62.1 bits (144), Expect = 1e-08
Identities = 29/90 (32%), Positives = 45/90 (50%)
Frame = +3
Query: 264 TSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIISXERGKKETFXXXXXXXX 443
+ FF+PA GGDPI Y HLF F HPEVY+L++P G++ ++ +K +
Sbjct: 219 SGFFNPAVGGDPIAYAHLFWFTFHPEVYVLVIPAIGMMYEMV-PRFSRKPIYSYNSGLFA 277
Query: 444 XXXXXXXXFIV*AHHIFTVGIELVHEHILL 533
F AHH+F G+ + + +
Sbjct: 278 FVLLTIVGFSSWAHHMFATGMSFTEKTVFM 307
Score = 41.5 bits (93), Expect = 0.018
Identities = 27/90 (30%), Positives = 42/90 (46%)
Frame = +1
Query: 4 PPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVG 183
PP S I+ G + D+ IF L + GISS S Q+PL +
Sbjct: 133 PPYSV-ISAPGPAADMWIFGLKILGISSILGSINFIVTILKCKHPDMSLGQVPLLAWSYL 191
Query: 184 ITAFLLXLSLPVLAGAITILLTDRTXIHHF 273
++ ++ ++LP A A+ +LLTDR + F
Sbjct: 192 SSSLIVLVALPTFAAALLMLLTDRLGVSGF 221
>UniRef50_Q5P1W4 Cluster: Cytochrome c oxidase, subunit I; n=13;
Bacteria|Rep: Cytochrome c oxidase, subunit I - Azoarcus
sp. (strain EbN1) (Aromatoleum aromaticum (strain EbN1))
Length = 607
Score = 61.7 bits (143), Expect = 2e-08
Identities = 32/79 (40%), Positives = 41/79 (51%)
Frame = +3
Query: 270 FFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIISXERGKKETFXXXXXXXXXX 449
FF GGDP+L+QHLF FFGHPEVYI+ LP G++S I+ +
Sbjct: 304 FFAAHLGGDPLLWQHLFWFFGHPEVYIIFLPAAGMVSMIV-PTMARTPLVGYRFVVLALV 362
Query: 450 XXXXXXFIV*AHHIFTVGI 506
F + HH+FT GI
Sbjct: 363 GTAFLSFGLWVHHMFTTGI 381
>UniRef50_Q9Z605 Cluster: Quinol oxidase subunit I; n=15;
Proteobacteria|Rep: Quinol oxidase subunit I -
Rhodobacter sphaeroides (Rhodopseudomonas sphaeroides)
Length = 825
Score = 61.7 bits (143), Expect = 2e-08
Identities = 33/79 (41%), Positives = 40/79 (50%)
Frame = +3
Query: 270 FFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIISXERGKKETFXXXXXXXXXX 449
FF A GGD +L+QHLF FGHPEVYI+ LP G IS I+ + E
Sbjct: 235 FFQVAEGGDSLLWQHLFWLFGHPEVYIIFLPAAGAISTILPV-MARTELIGYRWVVAAAI 293
Query: 450 XXXXXXFIV*AHHIFTVGI 506
F + HH+FT GI
Sbjct: 294 SLAVLSFGLWVHHMFTTGI 312
>UniRef50_A6C0L1 Cluster: Cytochrome c oxidase subunit I; n=1;
Planctomyces maris DSM 8797|Rep: Cytochrome c oxidase
subunit I - Planctomyces maris DSM 8797
Length = 606
Score = 61.7 bits (143), Expect = 2e-08
Identities = 30/74 (40%), Positives = 42/74 (56%)
Frame = +3
Query: 285 GGGDPILYQHLF*FFGHPEVYILILPGFGIISHIISXERGKKETFXXXXXXXXXXXXXXX 464
GGG P+L+QHLF F+ HP VYI++LP G++S ++S +K F
Sbjct: 276 GGGQPLLWQHLFWFYSHPAVYIMLLPIMGMVSDMLSC-MCRKPLFGYKPMVFSMSAIASL 334
Query: 465 XFIV*AHHIFTVGI 506
FIV HH+FT G+
Sbjct: 335 GFIVWGHHMFTSGM 348
>UniRef50_Q9WWR2 Cluster: Ubiquinol oxidase subunit 1 (EC 1.10.3.-)
(Ubiquinol oxidase polypeptide I) (Cytochrome o subunit
1) (Oxidase BO(3) subunit 1); n=240; Bacteria|Rep:
Ubiquinol oxidase subunit 1 (EC 1.10.3.-) (Ubiquinol
oxidase polypeptide I) (Cytochrome o subunit 1) (Oxidase
BO(3) subunit 1) - Pseudomonas putida
Length = 672
Score = 61.7 bits (143), Expect = 2e-08
Identities = 31/72 (43%), Positives = 40/72 (55%)
Frame = +3
Query: 288 GGDPILYQHLF*FFGHPEVYILILPGFGIISHIISXERGKKETFXXXXXXXXXXXXXXXX 467
GG+P++Y +LF +GHPEVYILILP FG+ S + S GK+ F
Sbjct: 269 GGNPMMYVNLFWAWGHPEVYILILPAFGVFSEVTSTFAGKR-LFGHHSMIYASGAIAVLG 327
Query: 468 FIV*AHHIFTVG 503
F V HH FT+G
Sbjct: 328 FAVWLHHFFTMG 339
Score = 37.5 bits (83), Expect = 0.29
Identities = 26/106 (24%), Positives = 40/106 (37%), Gaps = 1/106 (0%)
Frame = +1
Query: 1 YPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AV 180
YPPL+ G VD I++L L+G+ + +P+F
Sbjct: 173 YPPLAGIQYSPGVGVDYYIWALQLSGLGTTLTGVNFLVTVMKMRAPGMKLMDMPIFTWTC 232
Query: 181 GITAFLLXLSLPVLAGAITILLTDR-TXIHHFLILLEEETQFYINI 315
L+ S P+L A+ +L DR H F L Y+N+
Sbjct: 233 TWANVLIVASFPILTAALALLTVDRYLDFHIFTNELGGNPMMYVNL 278
>UniRef50_A4WT83 Cluster: Cytochrome c, monohaem; n=3;
Rhodobacteraceae|Rep: Cytochrome c, monohaem -
Rhodobacter sphaeroides ATCC 17025
Length = 878
Score = 61.3 bits (142), Expect = 2e-08
Identities = 30/79 (37%), Positives = 41/79 (51%)
Frame = +3
Query: 270 FFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIISXERGKKETFXXXXXXXXXX 449
FFDP GGDP+L+QHLF FGHPEVYI+ LP + + I+ ++
Sbjct: 261 FFDPERGGDPLLWQHLFWIFGHPEVYIIFLPLIALAAMIV-PTAARQPIVGYSWIVLSAV 319
Query: 450 XXXXXXFIV*AHHIFTVGI 506
F + HH+FT G+
Sbjct: 320 GTGFLSFGLWVHHMFTTGL 338
>UniRef50_Q05FH1 Cluster: Cytochrome O ubiquinol oxidase subunit I;
n=1; Candidatus Carsonella ruddii PV|Rep: Cytochrome O
ubiquinol oxidase subunit I - Carsonella ruddii (strain
PV)
Length = 606
Score = 60.1 bits (139), Expect = 5e-08
Identities = 36/90 (40%), Positives = 43/90 (47%)
Frame = +3
Query: 234 YNIINRSNLXTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIISXERGKKE 413
+ I L T F+ GG +LY +L +GHPEVYILILP FGI S IIS K
Sbjct: 246 FQIFLDRTLSTHFYSSFYGGQQMLYINLIWAWGHPEVYILILPSFGIFSEIISY-ICVKS 304
Query: 414 TFXXXXXXXXXXXXXXXXFIV*AHHIFTVG 503
F F+V HH FT+G
Sbjct: 305 VFSYISLIYATISITVLSFLVWLHHFFTMG 334
Score = 33.1 bits (72), Expect = 6.3
Identities = 24/106 (22%), Positives = 42/106 (39%), Gaps = 1/106 (0%)
Frame = +1
Query: 1 YPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AV 180
YPPLS VD +S+ ++GI + F+++ +F+
Sbjct: 168 YPPLSEKTFSPWVGVDYWNWSIQISGIGTIISSINFITTILKLRKKKLFFNKISIFMWTC 227
Query: 181 GITAFLLXLSLPVLAGAITILLTDRTXIHHFL-ILLEEETQFYINI 315
+ L+ +S P+L + + DRT HF + YIN+
Sbjct: 228 LCSNILILISFPILTILLFQIFLDRTLSTHFYSSFYGGQQMLYINL 273
>UniRef50_A3SJL2 Cluster: QoxA, Quinol oxidase subunit I; n=2;
Rhodobacteraceae|Rep: QoxA, Quinol oxidase subunit I -
Roseovarius nubinhibens ISM
Length = 818
Score = 60.1 bits (139), Expect = 5e-08
Identities = 32/79 (40%), Positives = 39/79 (49%)
Frame = +3
Query: 270 FFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIISXERGKKETFXXXXXXXXXX 449
FF A GGD +L+QHLF FGHPEVYI+ LP G IS I+ +
Sbjct: 235 FFQAAAGGDALLWQHLFWLFGHPEVYIIFLPAAGAISTILPV-MARTGLLGYGWIVAAAV 293
Query: 450 XXXXXXFIV*AHHIFTVGI 506
F + HH+FT GI
Sbjct: 294 ALGVLSFGLWVHHMFTTGI 312
>UniRef50_Q0AI64 Cluster: Cytochrome-c oxidase; n=3;
Proteobacteria|Rep: Cytochrome-c oxidase - Nitrosomonas
eutropha (strain C71)
Length = 703
Score = 58.8 bits (136), Expect = 1e-07
Identities = 32/78 (41%), Positives = 40/78 (51%)
Frame = +3
Query: 270 FFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIISXERGKKETFXXXXXXXXXX 449
FF GG+ + + ++F FGHPEVYILILP FG+ S I S G K F
Sbjct: 283 FFTNGLGGNQMNFLNMFWLFGHPEVYILILPAFGVYSEIFSTFSG-KVLFGYKSLVWATI 341
Query: 450 XXXXXXFIV*AHHIFTVG 503
F+V HH FT+G
Sbjct: 342 SIAFLSFLVWLHHFFTMG 359
Score = 35.1 bits (77), Expect = 1.6
Identities = 24/91 (26%), Positives = 34/91 (37%)
Frame = +1
Query: 1 YPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AV 180
YPP + + + G VD I+SL LA + S +PLF
Sbjct: 193 YPPYTETLYNPGIGVDYWIWSLTLASLGSTLTGINIAVTIYKKRAPGMKLYYMPLFTWTA 252
Query: 181 GITAFLLXLSLPVLAGAITILLTDRTXIHHF 273
TA ++ ++P L L DR HF
Sbjct: 253 LCTAIMMIFAMPPLTVVTLQLALDRYLDFHF 283
>UniRef50_A0TRU9 Cluster: Cytochrome-c oxidase; n=30;
Proteobacteria|Rep: Cytochrome-c oxidase - Burkholderia
cenocepacia MC0-3
Length = 1004
Score = 58.8 bits (136), Expect = 1e-07
Identities = 31/84 (36%), Positives = 41/84 (48%)
Frame = +3
Query: 255 NLXTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIISXERGKKETFXXXXX 434
N T FFD A GG P+L+QHLF F HP VY+++LP GI+S + ++
Sbjct: 250 NAGTHFFDVAHGGRPLLWQHLFWMFAHPWVYVVVLPAMGIVSDAL-PTFCRRPLVAYEAV 308
Query: 435 XXXXXXXXXXXFIV*AHHIFTVGI 506
F V HH+F GI
Sbjct: 309 AVSTVATMLIGFEVWVHHMFATGI 332
>UniRef50_Q9RR77 Cluster: Cytochrome c oxidase, subunit I; n=2;
Deinococcus|Rep: Cytochrome c oxidase, subunit I -
Deinococcus radiodurans
Length = 820
Score = 58.4 bits (135), Expect = 1e-07
Identities = 31/83 (37%), Positives = 41/83 (49%)
Frame = +3
Query: 258 LXTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIISXERGKKETFXXXXXX 437
L S F+P GG P+LYQ F F+ HP VY+++LP GI + + S +K F
Sbjct: 233 LGLSMFNPGIGGVPVLYQQFFWFYSHPAVYVMLLPYLGIGAEVAS-TMARKPLFGYRVMV 291
Query: 438 XXXXXXXXXXFIV*AHHIFTVGI 506
IV HH+F VGI
Sbjct: 292 YSMLAIVLVSCIVWLHHMFAVGI 314
>UniRef50_A5FXH8 Cluster: Cytochrome-c oxidase; n=1; Acidiphilium
cryptum JF-5|Rep: Cytochrome-c oxidase - Acidiphilium
cryptum (strain JF-5)
Length = 689
Score = 56.4 bits (130), Expect = 6e-07
Identities = 32/82 (39%), Positives = 41/82 (50%)
Frame = +3
Query: 258 LXTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIISXERGKKETFXXXXXX 437
L T FF GG+ +LY +LF +GHPEVY ++LP FG IS II +K F
Sbjct: 278 LGTHFFTAGLGGNLMLYTNLFWIWGHPEVYFVVLPAFGFISEII-PTFAEKPLFGYATMV 336
Query: 438 XXXXXXXXXXFIV*AHHIFTVG 503
+ V HH FT+G
Sbjct: 337 IATFAIGGISWGVWLHHFFTMG 358
>UniRef50_Q8HCX2 Cluster: Cytochrome c oxidase subunit I; n=1;
Aplidium nordmanni|Rep: Cytochrome c oxidase subunit I -
Aplidium nordmanni
Length = 227
Score = 55.6 bits (128), Expect = 1e-06
Identities = 36/85 (42%), Positives = 41/85 (48%)
Frame = +1
Query: 1 YPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AV 180
YPP SS +AH +VDL IF LHLAGISS ++ LF
Sbjct: 119 YPPXSSGLAHSSGAVDLGIFXLHLAGISSXLGSMNFLVTLGNMKXKGLNYGNFSLFCWXX 178
Query: 181 GITAFLLXLSLPVLAGAITILLTDR 255
L LS PVLA AIT+L R
Sbjct: 179 VXXXXXLILSXPVLAAAITMLXXXR 203
>UniRef50_Q9TCV5 Cluster: Cytochrome c oxidase subunit I; n=6;
Digenea|Rep: Cytochrome c oxidase subunit I -
Echinostoma hortense
Length = 154
Score = 54.0 bits (124), Expect = 3e-06
Identities = 28/76 (36%), Positives = 36/76 (47%)
Frame = +3
Query: 324 FFGHPEVYILILPGFGIISHIISXERGKKETFXXXXXXXXXXXXXXXXFIV*AHHIFTVG 503
FFGHPEVY+LILP FGI+SHI F +V AHH+F VG
Sbjct: 1 FFGHPEVYVLILPVFGIVSHICMTFTNNDSLFGYYGLVLAMLAIVCLGSVVWAHHMFMVG 60
Query: 504 IELVHEHILLQLLEFI 551
+ VH + + +
Sbjct: 61 YD-VHTAVFFSSVTMV 75
>UniRef50_A7BSH8 Cluster: Cytochrome c oxidase aa3, subunit 1; n=1;
Beggiatoa sp. PS|Rep: Cytochrome c oxidase aa3, subunit
1 - Beggiatoa sp. PS
Length = 525
Score = 52.4 bits (120), Expect = 1e-05
Identities = 20/45 (44%), Positives = 30/45 (66%)
Frame = +3
Query: 258 LXTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIIS 392
+ T FFD A GGD + YQ+LF F+ HP VY++ LP ++ I++
Sbjct: 215 IGTHFFDAAAGGDALTYQNLFWFYSHPAVYVIFLPFMAMVFEIVA 259
>UniRef50_Q5V018 Cluster: Cytochrome c oxidase subunit I; n=3;
Halobacteriaceae|Rep: Cytochrome c oxidase subunit I -
Haloarcula marismortui (Halobacterium marismortui)
Length = 854
Score = 50.8 bits (116), Expect = 3e-05
Identities = 26/79 (32%), Positives = 36/79 (45%)
Frame = +3
Query: 276 DPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIISXERGKKETFXXXXXXXXXXXX 455
D G +L+ HLF FFGHPEVYI+ P G+++ G++
Sbjct: 243 DADNPGASLLWAHLFWFFGHPEVYIVFFPALGVMAECFQTFTGRR-LVGRKWFIISMVLV 301
Query: 456 XXXXFIV*AHHIFTVGIEL 512
F+V HH+F GI L
Sbjct: 302 ALQSFVVWMHHMFLTGINL 320
>UniRef50_Q9MFX8 Cluster: Cytochrome oxidase I; n=5; Echinometra
lucunter|Rep: Cytochrome oxidase I - Echinometra
lucunter
Length = 199
Score = 47.6 bits (108), Expect = 3e-04
Identities = 24/64 (37%), Positives = 32/64 (50%)
Frame = +2
Query: 311 TFILIFWTS*SLYFNFTRIWYNFSYYFTRKRKKRNFWLFRNNLCYTSNWVIRIYCLSSSY 490
T ILI W S+Y F IW +F+ T FW+ N L + SNW I C+S +
Sbjct: 1 TPILILWPPSSIYSYFAGIWNDFARNRTLFSNASTFWVPGNGLRHDSNWSPSIPCMSPPH 60
Query: 491 IHCR 502
+H R
Sbjct: 61 VHSR 64
>UniRef50_Q2N1P8 Cluster: Cytochrome c oxidase subunit I; n=2;
Eutetramorium sp. BLF m1|Rep: Cytochrome c oxidase
subunit I - Eutetramorium sp. BLF m1
Length = 201
Score = 46.8 bits (106), Expect = 5e-04
Identities = 32/74 (43%), Positives = 39/74 (52%)
Frame = +1
Query: 34 GRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFLLXLSL 213
G L IFSL + S + D++ L ++ ITA LL LSL
Sbjct: 124 GSXXXLXIFSLXIXXXSXIFSAXNFISXIINMRHTMLTMDKISLLSWSILITAVLLLLSL 183
Query: 214 PVLAGAITILLTDR 255
PVLAGAIT+LLTDR
Sbjct: 184 PVLAGAITMLLTDR 197
>UniRef50_A1XI88 Cluster: Cytochrome c oxidase subunit I; n=1;
Myrmarachne sp. G FSC-2006|Rep: Cytochrome c oxidase
subunit I - Myrmarachne sp. G FSC-2006
Length = 129
Score = 46.8 bits (106), Expect = 5e-04
Identities = 21/29 (72%), Positives = 23/29 (79%)
Frame = +1
Query: 1 YPPLSSNIAHRGRSVDLAIFSLHLAGISS 87
YPPL+S + H G SVD AIFSLHLAG SS
Sbjct: 24 YPPLASVVGHGGSSVDFAIFSLHLAGASS 52
>UniRef50_O99652 Cluster: Cytochrome c oxidase subunit I; n=1;
Tetragona dorsalis ziegleri|Rep: Cytochrome c oxidase
subunit I - Tetragona dorsalis ziegleri
Length = 111
Score = 44.8 bits (101), Expect = 0.002
Identities = 24/48 (50%), Positives = 31/48 (64%)
Frame = +1
Query: 151 DQLPLFV*AVGITAFLLXLSLPVLAGAITILLTDRTXIHHFLILLEEE 294
DQ+ LF ++ IT L LSLP+LAG IT+LL+DR F IL+ E
Sbjct: 12 DQINLFSWSISITVNLSILSLPMLAGTITMLLSDRNFNKFFFILIGGE 59
Score = 33.9 bits (74), Expect = 3.6
Identities = 16/40 (40%), Positives = 23/40 (57%)
Frame = +3
Query: 240 IINRSNLXTSFFDPAGGGDPILYQHLF*FFGHPEVYILIL 359
+++ N FF GG PIL+Q++ FGH +V LIL
Sbjct: 42 LLSDRNFNKFFFILIGGEYPILHQYMLWLFGHTDVLFLIL 81
>UniRef50_Q6KZG3 Cluster: Cytochrome c oxidase polypeptide I/III;
n=2; Thermoplasmatales|Rep: Cytochrome c oxidase
polypeptide I/III - Picrophilus torridus
Length = 841
Score = 44.0 bits (99), Expect = 0.003
Identities = 24/84 (28%), Positives = 40/84 (47%)
Frame = +3
Query: 255 NLXTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIISXERGKKETFXXXXX 434
NL + + + G +++++LF +FGHPEVY+L+LPG G + +S + +
Sbjct: 243 NLMHASYYISNYGGALMWENLFWYFGHPEVYLLLLPGTGAMFDYLS-NLNHRPPYLKKWM 301
Query: 435 XXXXXXXXXXXFIV*AHHIFTVGI 506
+V HH F GI
Sbjct: 302 IAAMGAISVDSVMVFLHHTFMTGI 325
>UniRef50_Q8LX74 Cluster: Cytochrome c oxidase subunit I; n=1;
Chaoborus punctipennis|Rep: Cytochrome c oxidase subunit
I - Chaoborus punctipennis
Length = 205
Score = 38.7 bits (86), Expect = 0.13
Identities = 21/39 (53%), Positives = 25/39 (64%)
Frame = +2
Query: 509 IGTRAYFTSATRIYWLYQQELKFLG*LATIHGTQIN*KP 625
+ TRAYFTSAT I + +K LAT+HGTQIN P
Sbjct: 2 VDTRAYFTSATMIIAV-PTGIKIFSWLATLHGTQINYTP 39
>UniRef50_Q8LX70 Cluster: Cytochrome c oxidase subunit I; n=4;
Chaoborus|Rep: Cytochrome c oxidase subunit I -
Chaoborus crystallinus (Phantom midge) (Tipula
crystallina)
Length = 207
Score = 38.3 bits (85), Expect = 0.17
Identities = 21/37 (56%), Positives = 24/37 (64%)
Frame = +2
Query: 515 TRAYFTSATRIYWLYQQELKFLG*LATIHGTQIN*KP 625
TRAYFTSAT I + +K LAT+HGTQIN P
Sbjct: 5 TRAYFTSATMIIAV-PTGIKIFSWLATLHGTQINYSP 40
>UniRef50_Q7YI87 Cluster: Cytochrome oxidase subunit I; n=1;
Celatoblatta vulgaris|Rep: Cytochrome oxidase subunit I
- Celatoblatta vulgaris
Length = 134
Score = 37.5 bits (83), Expect = 0.29
Identities = 17/38 (44%), Positives = 20/38 (52%)
Frame = +3
Query: 171 MSCRDYSXXXXXXTTCFSWSYYNIINRSNLXTSFFDPA 284
M C +YS +TC WSYYN IN S L F P+
Sbjct: 84 MICSNYSFTIIIVSTCSCWSYYNTINWSKLKYILFWPS 121
>UniRef50_O86945 Cluster: Sub-unit I of an aa3-type cytochrome
oxidase; n=1; Acidithiobacillus ferrooxidans|Rep:
Sub-unit I of an aa3-type cytochrome oxidase -
Thiobacillus ferrooxidans (Acidithiobacillus
ferrooxidans)
Length = 627
Score = 36.7 bits (81), Expect = 0.51
Identities = 18/41 (43%), Positives = 21/41 (51%)
Frame = +3
Query: 267 SFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHII 389
S F G P+ Y F F HPEVY+ ILP F I I+
Sbjct: 311 SHFYTGPTGHPLAYLDQFWFLFHPEVYVFILPAFAIWLEIL 351
>UniRef50_Q3L2S5 Cluster: Cytochrome c oxidase subunit I; n=1; Aedes
cretinus|Rep: Cytochrome c oxidase subunit I - Aedes
cretinus
Length = 153
Score = 36.7 bits (81), Expect = 0.51
Identities = 16/21 (76%), Positives = 17/21 (80%)
Frame = +1
Query: 1 YPPLSSNIAHRGRSVDLAIFS 63
YPPLSS AH G SVDLAI+S
Sbjct: 45 YPPLSSGTAHAGASVDLAIYS 65
>UniRef50_Q9XLV8 Cluster: Cytochrome c oxidase subunit I; n=1;
Diplonema papillatum|Rep: Cytochrome c oxidase subunit I
- Diplonema papillatum
Length = 287
Score = 36.3 bits (80), Expect = 0.68
Identities = 18/57 (31%), Positives = 29/57 (50%)
Frame = +3
Query: 342 VYILILPGFGIISHIISXERGKKETFXXXXXXXXXXXXXXXXFIV*AHHIFTVGIEL 512
VY++ILP FG++SH + G + + V AHH+FTVG+++
Sbjct: 1 VYVIILPVFGLVSHSL-HRGGLFSLYNMLGMVYAMIAIAVVGYFVWAHHMFTVGLDV 56
>UniRef50_Q8LX82 Cluster: Cytochrome c oxidase subunit I; n=3;
Chaoborus|Rep: Cytochrome c oxidase subunit I -
Chaoborus obscuripes
Length = 206
Score = 36.3 bits (80), Expect = 0.68
Identities = 17/41 (41%), Positives = 25/41 (60%)
Frame = +1
Query: 517 TSIFYFSY*NLLAVPTGIKIFRMTSYNTWNSN*LETLIFYG 639
T ++ S ++AVPTGIKIF + TWNSN ++ + G
Sbjct: 4 TRAYFTSATMIIAVPTGIKIFSWLATFTWNSNLFFSITYMG 44
>UniRef50_O67937 Cluster: Cytochrome c oxidase subunit I; n=1;
Aquifex aeolicus|Rep: Cytochrome c oxidase subunit I -
Aquifex aeolicus
Length = 592
Score = 34.7 bits (76), Expect = 2.1
Identities = 19/42 (45%), Positives = 27/42 (64%), Gaps = 4/42 (9%)
Frame = +3
Query: 294 DPILYQHLF*FFGHPEVYILILPG----FGIISHIISXERGK 407
+P+L + LF FFGHP VY +LP + I+ I+S E+GK
Sbjct: 209 NPLLARTLFWFFGHPVVYFWLLPAYVALYTILPKIVS-EKGK 249
>UniRef50_A5URU0 Cluster: Cytochrome c oxidase, subunit I; n=4;
Chloroflexaceae|Rep: Cytochrome c oxidase, subunit I -
Roseiflexus sp. RS-1
Length = 561
Score = 33.9 bits (74), Expect = 3.6
Identities = 14/27 (51%), Positives = 18/27 (66%)
Frame = +3
Query: 288 GGDPILYQHLF*FFGHPEVYILILPGF 368
G DP+L + LF F GHP VY +LP +
Sbjct: 224 GTDPVLARTLFWFTGHPIVYFWLLPAY 250
>UniRef50_Q59IQ0 Cluster: Cytochrome c oxidase subunit I; n=1;
Watasenia scintillans|Rep: Cytochrome c oxidase subunit
I - Watasenia scintillans (Sparkling enope)
Length = 217
Score = 33.1 bits (72), Expect = 6.3
Identities = 15/18 (83%), Positives = 16/18 (88%)
Frame = +1
Query: 34 GRSVDLAIFSLHLAGISS 87
G SVDLAIF LHLAG+SS
Sbjct: 122 GPSVDLAIFPLHLAGVSS 139
>UniRef50_Q5CTJ9 Cluster: Cation-transporting ATPase; n=2;
Cryptosporidium|Rep: Cation-transporting ATPase -
Cryptosporidium parvum Iowa II
Length = 1434
Score = 32.7 bits (71), Expect = 8.4
Identities = 18/63 (28%), Positives = 30/63 (47%), Gaps = 2/63 (3%)
Frame = +2
Query: 314 FILIFWT--S*SLYFNFTRIWYNFSYYFTRKRKKRNFWLFRNNLCYTSNWVIRIYCLSSS 487
+I+ FW+ S SLYFN + N + T KK N L + +C+ + + S +
Sbjct: 558 YIIPFWSTSSMSLYFNNAIKYLNSEHILTTNPKKLNQLLLVDTICFDKTGTLTVPTFSIN 617
Query: 488 YIH 496
+H
Sbjct: 618 NVH 620
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 487,592,323
Number of Sequences: 1657284
Number of extensions: 7731615
Number of successful extensions: 15804
Number of sequences better than 10.0: 106
Number of HSP's better than 10.0 without gapping: 15179
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15698
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 52066120554
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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