Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= prgv0303
         (674 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF487537-1|AAL93298.1|  507|Anopheles gambiae cytochrome P450 CY...    25   2.9  
AF020870-1|AAC31873.1|  692|Anopheles gambiae hexamerin A protein.     24   3.8  
AY500851-1|AAS77205.1|  605|Anopheles gambiae G-protein coupled ...    24   5.0  
AJ271193-1|CAB66001.1| 1623|Anopheles gambiae laminin gamma 1 pr...    24   5.0  

>AF487537-1|AAL93298.1|  507|Anopheles gambiae cytochrome P450
           CYP6P2 protein.
          Length = 507

 Score = 24.6 bits (51), Expect = 2.9
 Identities = 10/27 (37%), Positives = 16/27 (59%)
 Frame = +1

Query: 547 LLAVPTGIKIFRMTSYNTWNSN*LETL 627
           L+A+ TG+ +F    YN W++    TL
Sbjct: 11  LVALATGLYLFVRNRYNYWSNRQFPTL 37


>AF020870-1|AAC31873.1|  692|Anopheles gambiae hexamerin A protein.
          Length = 692

 Score = 24.2 bits (50), Expect = 3.8
 Identities = 10/37 (27%), Positives = 22/37 (59%)
 Frame = +2

Query: 326 FWTS*SLYFNFTRIWYNFSYYFTRKRKKRNFWLFRNN 436
           F+ S    + F R+  NF+Y++T+    ++ ++F N+
Sbjct: 649 FYDSLPFGYPFDRV-INFNYFYTKNMYFKDVFIFHND 684


>AY500851-1|AAS77205.1|  605|Anopheles gambiae G-protein coupled
           receptor 3 protein.
          Length = 605

 Score = 23.8 bits (49), Expect = 5.0
 Identities = 9/18 (50%), Positives = 11/18 (61%)
 Frame = -3

Query: 588 SHPKNFNSCWYSQ*ILVA 535
           +HP NF+ CW     LVA
Sbjct: 329 THPMNFSGCWSRARKLVA 346


>AJ271193-1|CAB66001.1| 1623|Anopheles gambiae laminin gamma 1
            precursor protein.
          Length = 1623

 Score = 23.8 bits (49), Expect = 5.0
 Identities = 11/23 (47%), Positives = 17/23 (73%)
 Frame = -3

Query: 375  LYQILVKLKYKLQDVQKIKINVD 307
            L +IL +L+ +LQ+VQK+  N D
Sbjct: 1102 LNEILRELEARLQEVQKLLDNAD 1124


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 500,631
Number of Sequences: 2352
Number of extensions: 8084
Number of successful extensions: 12
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 67741110
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)