Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= prgv0302
         (508 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF217810-1|AAF71998.1|  431|Tribolium castaneum fork head orthol...    23   1.6  
AM292364-1|CAL23176.2|  353|Tribolium castaneum gustatory recept...    21   4.8  
AM292355-1|CAL23167.1|  324|Tribolium castaneum gustatory recept...    21   4.8  
AM295014-1|CAL25729.1|  407|Tribolium castaneum ultraspiracle nu...    21   6.3  
AM292378-1|CAL23190.2|  387|Tribolium castaneum gustatory recept...    21   8.4  
AM292365-1|CAL23177.1|  313|Tribolium castaneum gustatory recept...    21   8.4  
AM292325-1|CAL23137.2|  309|Tribolium castaneum gustatory recept...    21   8.4  

>AF217810-1|AAF71998.1|  431|Tribolium castaneum fork head
           orthologue protein.
          Length = 431

 Score = 23.0 bits (47), Expect = 1.6
 Identities = 8/19 (42%), Positives = 11/19 (57%)
 Frame = -1

Query: 271 KWPLLVPHFVCINDCFVVV 215
           +W   + H +  NDCFV V
Sbjct: 183 RWQNSIRHSLSFNDCFVKV 201


>AM292364-1|CAL23176.2|  353|Tribolium castaneum gustatory receptor
           candidate 43 protein.
          Length = 353

 Score = 21.4 bits (43), Expect = 4.8
 Identities = 8/15 (53%), Positives = 10/15 (66%)
 Frame = -1

Query: 73  LSFPNSAFDWAFPFL 29
           ++F NSAF W   FL
Sbjct: 211 VNFYNSAFGWPIAFL 225


>AM292355-1|CAL23167.1|  324|Tribolium castaneum gustatory receptor
           candidate 34 protein.
          Length = 324

 Score = 21.4 bits (43), Expect = 4.8
 Identities = 11/34 (32%), Positives = 16/34 (47%)
 Frame = -3

Query: 185 FFFKINAFKFISVTFCLINCMRYTFYTNKTLILL 84
           FFF+    KF       I+ +   F  N TLI++
Sbjct: 223 FFFRFEKSKFEPFLISNISLVSLIFLFNCTLIIM 256


>AM295014-1|CAL25729.1|  407|Tribolium castaneum ultraspiracle
           nuclear receptor protein.
          Length = 407

 Score = 21.0 bits (42), Expect = 6.3
 Identities = 7/14 (50%), Positives = 9/14 (64%)
 Frame = -1

Query: 277 LCKWPLLVPHFVCI 236
           L +W  LVPHF  +
Sbjct: 225 LVQWAKLVPHFTSL 238


>AM292378-1|CAL23190.2|  387|Tribolium castaneum gustatory receptor
           candidate 57 protein.
          Length = 387

 Score = 20.6 bits (41), Expect = 8.4
 Identities = 10/29 (34%), Positives = 15/29 (51%)
 Frame = -3

Query: 119 YTFYTNKTLILLRFSIVVPEQCF*LGLSL 33
           +T+Y   T I L F  V+P + F   L +
Sbjct: 152 FTYYVCNTTIFLIFHSVLPIKRFFTSLGI 180


>AM292365-1|CAL23177.1|  313|Tribolium castaneum gustatory receptor
           candidate 44 protein.
          Length = 313

 Score = 20.6 bits (41), Expect = 8.4
 Identities = 10/35 (28%), Positives = 18/35 (51%)
 Frame = -3

Query: 191 LTFFFKINAFKFISVTFCLINCMRYTFYTNKTLIL 87
           ++F+F I+ F +   T  +I      FY +  LI+
Sbjct: 237 VSFYFFISTFFYFFTTGNIIATYDKQFYIHNALIV 271


>AM292325-1|CAL23137.2|  309|Tribolium castaneum gustatory receptor
           candidate 4 protein.
          Length = 309

 Score = 20.6 bits (41), Expect = 8.4
 Identities = 10/35 (28%), Positives = 18/35 (51%)
 Frame = -3

Query: 191 LTFFFKINAFKFISVTFCLINCMRYTFYTNKTLIL 87
           ++F+F I+ F +   T  +I      FY +  LI+
Sbjct: 233 VSFYFFISTFFYFFTTGNIIATYDKQFYIHNALIV 267


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 118,971
Number of Sequences: 336
Number of extensions: 2521
Number of successful extensions: 9
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 12049355
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)