Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= prgv0301
         (679 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

CR954257-14|CAJ14165.1| 1726|Anopheles gambiae BEL12_AG transpos...    75   3e-15
AB097148-2|BAC82628.1| 1077|Anopheles gambiae pol-like protein p...    24   5.1  
AY146731-1|AAO12091.1|  150|Anopheles gambiae odorant-binding pr...    23   6.7  
AF437887-1|AAL84182.1|  150|Anopheles gambiae odorant binding pr...    23   6.7  
AY705396-1|AAU12505.1|  710|Anopheles gambiae nicotinic acetylch...    23   8.9  

>CR954257-14|CAJ14165.1| 1726|Anopheles gambiae BEL12_AG transposon
            polyprotein protein.
          Length = 1726

 Score = 74.5 bits (175), Expect = 3e-15
 Identities = 42/113 (37%), Positives = 62/113 (54%), Gaps = 1/113 (0%)
 Frame = +3

Query: 258  IPRYAMCIEPICIELHIFTDASQTAYGACAYIRTIDKDSSVVTRLLCSKGKVAPLKA-IT 434
            +PR    +    I++H F DAS+  YGAC Y+R+ + +  +V+RL  SK KV PL    T
Sbjct: 1032 VPRCVTIVGARNIQIHGFCDASEEGYGACVYVRSTNGE-EIVSRLFVSKSKVTPLATKHT 1090

Query: 435  IPRLELCGAVLGARLYXKINESLRFNFNKVVFWTDSTIVLGWLGMPTKLMKSY 593
            I RLELC A L  +L  K+  +    + +   WTDS+ V+ WL       K++
Sbjct: 1091 IARLELCAAHLLGKLLVKLKRATEDPY-ETFCWTDSSTVIYWLKSSPSRWKTF 1142



 Score = 51.6 bits (118), Expect = 2e-08
 Identities = 27/73 (36%), Positives = 39/73 (53%), Gaps = 6/73 (8%)
 Frame = +1

Query: 55   IITKRIILSGASQIYDPLGLISPVITIAKILLQKCWLLK------LNWDEPVPCDVAQSW 216
            I TKR I+   ++IYDPLG++  V   AK  +Q+ W LK        WDE +P  + Q W
Sbjct: 958  IYTKRSIIRTIAKIYDPLGIVDTVKAKAKQFMQRVWSLKKENGDSYGWDEEIPQQMRQEW 1017

Query: 217  DRFVSCLSLLNNI 255
            + F   L+ L  +
Sbjct: 1018 EVFERQLTHLQEV 1030


>AB097148-2|BAC82628.1| 1077|Anopheles gambiae pol-like protein
           protein.
          Length = 1077

 Score = 23.8 bits (49), Expect = 5.1
 Identities = 10/23 (43%), Positives = 13/23 (56%)
 Frame = +3

Query: 408 KVAPLKAITIPRLELCGAVLGAR 476
           KV PL    +P+L    +V GAR
Sbjct: 787 KVVPLNTFLLPKLWFVASVCGAR 809


>AY146731-1|AAO12091.1|  150|Anopheles gambiae odorant-binding
           protein AgamOBP4 protein.
          Length = 150

 Score = 23.4 bits (48), Expect = 6.7
 Identities = 9/20 (45%), Positives = 12/20 (60%)
 Frame = +2

Query: 596 FKIRTAEIHWLNERIHPWRP 655
           FK+  AE+H L + I P  P
Sbjct: 47  FKVEEAELHGLRKSIFPANP 66


>AF437887-1|AAL84182.1|  150|Anopheles gambiae odorant binding
           protein protein.
          Length = 150

 Score = 23.4 bits (48), Expect = 6.7
 Identities = 9/20 (45%), Positives = 12/20 (60%)
 Frame = +2

Query: 596 FKIRTAEIHWLNERIHPWRP 655
           FK+  AE+H L + I P  P
Sbjct: 47  FKVEEAELHGLRKSIFPANP 66


>AY705396-1|AAU12505.1|  710|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 3 protein.
          Length = 710

 Score = 23.0 bits (47), Expect = 8.9
 Identities = 10/25 (40%), Positives = 15/25 (60%)
 Frame = +3

Query: 252 HHIPRYAMCIEPICIELHIFTDASQ 326
           +H+P+  +   PI   LH F+ ASQ
Sbjct: 346 NHLPKLLVMRRPIYQPLHHFSAASQ 370


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 722,626
Number of Sequences: 2352
Number of extensions: 15866
Number of successful extensions: 28
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 24
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 25
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 68159265
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)