Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= prgv0301
(679 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ996537-1|ABJ91576.1| 991|Homo sapiens sodium bicarbonate cotr... 31 3.8
DQ996398-1|ABJ91577.1| 991|Homo sapiens sodium bicarbonate cotr... 31 3.8
DQ975204-1|ABJ09587.1| 1040|Homo sapiens sodium-driven chloride ... 31 3.8
DQ063579-1|AAY79176.1| 1093|Homo sapiens Na+-driven Cl-HCO3 exch... 31 3.8
BC025994-1|AAH25994.1| 691|Homo sapiens SLC4A8 protein protein. 31 3.8
AK128321-1|BAC87383.1| 329|Homo sapiens ember 8 (SLC4A8). prot... 31 3.8
AF107099-1|AAD52981.1| 670|Homo sapiens sodium bicarbonate cotr... 31 3.8
AF069512-1|AAC82380.1| 1044|Homo sapiens sodium bicarbonate cotr... 31 3.8
AB018282-1|BAA34459.1| 1130|Homo sapiens KIAA0739 protein protein. 31 3.8
BC006417-1|AAH06417.2| 580|Homo sapiens XRN2 protein protein. 30 8.7
AL158013-2|CAH71495.1| 950|Homo sapiens 5'-3' exoribonuclease 2... 30 8.7
AL117332-2|CAI19756.1| 950|Homo sapiens 5'-3' exoribonuclease 2... 30 8.7
AK000084-1|BAA90934.1| 560|Homo sapiens protein ( Homo sapiens ... 30 8.7
AF152169-1|AAQ13577.1| 950|Homo sapiens DHP protein protein. 30 8.7
AF064257-1|AAD55138.1| 950|Homo sapiens Dhm1-like protein protein. 30 8.7
>DQ996537-1|ABJ91576.1| 991|Homo sapiens sodium bicarbonate
cotransporter protein.
Length = 991
Score = 31.1 bits (67), Expect = 3.8
Identities = 13/30 (43%), Positives = 19/30 (63%)
Frame = -1
Query: 238 IGKKQTDPMIARRHKEPVHPN*VSTANIFV 149
+GKKQ+DP + +H + V P V T N+ V
Sbjct: 188 VGKKQSDPHLMDKHGQTVSPQSVPTTNLEV 217
>DQ996398-1|ABJ91577.1| 991|Homo sapiens sodium bicarbonate
cotransporter protein.
Length = 991
Score = 31.1 bits (67), Expect = 3.8
Identities = 13/30 (43%), Positives = 19/30 (63%)
Frame = -1
Query: 238 IGKKQTDPMIARRHKEPVHPN*VSTANIFV 149
+GKKQ+DP + +H + V P V T N+ V
Sbjct: 188 VGKKQSDPHLMDKHGQTVSPQSVPTTNLEV 217
>DQ975204-1|ABJ09587.1| 1040|Homo sapiens sodium-driven chloride
bicarbonate exchanger protein.
Length = 1040
Score = 31.1 bits (67), Expect = 3.8
Identities = 13/30 (43%), Positives = 19/30 (63%)
Frame = -1
Query: 238 IGKKQTDPMIARRHKEPVHPN*VSTANIFV 149
+GKKQ+DP + +H + V P V T N+ V
Sbjct: 188 VGKKQSDPHLMDKHGQTVSPQSVPTTNLEV 217
>DQ063579-1|AAY79176.1| 1093|Homo sapiens Na+-driven Cl-HCO3
exchanger protein.
Length = 1093
Score = 31.1 bits (67), Expect = 3.8
Identities = 13/30 (43%), Positives = 19/30 (63%)
Frame = -1
Query: 238 IGKKQTDPMIARRHKEPVHPN*VSTANIFV 149
+GKKQ+DP + +H + V P V T N+ V
Sbjct: 241 VGKKQSDPHLMDKHGQTVSPQSVPTTNLEV 270
>BC025994-1|AAH25994.1| 691|Homo sapiens SLC4A8 protein protein.
Length = 691
Score = 31.1 bits (67), Expect = 3.8
Identities = 13/30 (43%), Positives = 19/30 (63%)
Frame = -1
Query: 238 IGKKQTDPMIARRHKEPVHPN*VSTANIFV 149
+GKKQ+DP + +H + V P V T N+ V
Sbjct: 241 VGKKQSDPHLMDKHGQTVSPQSVPTTNLEV 270
>AK128321-1|BAC87383.1| 329|Homo sapiens ember 8 (SLC4A8).
protein.
Length = 329
Score = 31.1 bits (67), Expect = 3.8
Identities = 13/30 (43%), Positives = 19/30 (63%)
Frame = -1
Query: 238 IGKKQTDPMIARRHKEPVHPN*VSTANIFV 149
+GKKQ+DP + +H + V P V T N+ V
Sbjct: 188 VGKKQSDPHLMDKHGQTVSPQSVPTTNLEV 217
>AF107099-1|AAD52981.1| 670|Homo sapiens sodium bicarbonate
cotransporter isoform 3 protein.
Length = 670
Score = 31.1 bits (67), Expect = 3.8
Identities = 13/30 (43%), Positives = 19/30 (63%)
Frame = -1
Query: 238 IGKKQTDPMIARRHKEPVHPN*VSTANIFV 149
+GKKQ+DP + +H + V P V T N+ V
Sbjct: 241 VGKKQSDPHLMDKHGQTVSPQSVPTTNLEV 270
>AF069512-1|AAC82380.1| 1044|Homo sapiens sodium bicarbonate
cotransporter protein.
Length = 1044
Score = 31.1 bits (67), Expect = 3.8
Identities = 13/30 (43%), Positives = 19/30 (63%)
Frame = -1
Query: 238 IGKKQTDPMIARRHKEPVHPN*VSTANIFV 149
+GKKQ+DP + +H + V P V T N+ V
Sbjct: 241 VGKKQSDPHLMDKHGQTVSPQSVPTTNLEV 270
>AB018282-1|BAA34459.1| 1130|Homo sapiens KIAA0739 protein protein.
Length = 1130
Score = 31.1 bits (67), Expect = 3.8
Identities = 13/30 (43%), Positives = 19/30 (63%)
Frame = -1
Query: 238 IGKKQTDPMIARRHKEPVHPN*VSTANIFV 149
+GKKQ+DP + +H + V P V T N+ V
Sbjct: 327 VGKKQSDPHLMDKHGQTVSPQSVPTTNLEV 356
>BC006417-1|AAH06417.2| 580|Homo sapiens XRN2 protein protein.
Length = 580
Score = 29.9 bits (64), Expect = 8.7
Identities = 11/23 (47%), Positives = 16/23 (69%)
Frame = -2
Query: 222 PIP*LRDVTRNRFIPIKFQQPTF 154
P+P LRD+T+N + I F+ P F
Sbjct: 368 PVPMLRDLTQNTVVSINFKDPQF 390
>AL158013-2|CAH71495.1| 950|Homo sapiens 5'-3' exoribonuclease 2
protein.
Length = 950
Score = 29.9 bits (64), Expect = 8.7
Identities = 11/23 (47%), Positives = 16/23 (69%)
Frame = -2
Query: 222 PIP*LRDVTRNRFIPIKFQQPTF 154
P+P LRD+T+N + I F+ P F
Sbjct: 738 PVPMLRDLTQNTVVSINFKDPQF 760
>AL117332-2|CAI19756.1| 950|Homo sapiens 5'-3' exoribonuclease 2
protein.
Length = 950
Score = 29.9 bits (64), Expect = 8.7
Identities = 11/23 (47%), Positives = 16/23 (69%)
Frame = -2
Query: 222 PIP*LRDVTRNRFIPIKFQQPTF 154
P+P LRD+T+N + I F+ P F
Sbjct: 738 PVPMLRDLTQNTVVSINFKDPQF 760
>AK000084-1|BAA90934.1| 560|Homo sapiens protein ( Homo sapiens
cDNA FLJ20077 fis, clone COL02904. ).
Length = 560
Score = 29.9 bits (64), Expect = 8.7
Identities = 11/23 (47%), Positives = 16/23 (69%)
Frame = -2
Query: 222 PIP*LRDVTRNRFIPIKFQQPTF 154
P+P LRD+T+N + I F+ P F
Sbjct: 348 PVPMLRDLTQNTVVSINFKDPQF 370
>AF152169-1|AAQ13577.1| 950|Homo sapiens DHP protein protein.
Length = 950
Score = 29.9 bits (64), Expect = 8.7
Identities = 11/23 (47%), Positives = 16/23 (69%)
Frame = -2
Query: 222 PIP*LRDVTRNRFIPIKFQQPTF 154
P+P LRD+T+N + I F+ P F
Sbjct: 738 PVPMLRDLTQNTVVSINFKDPQF 760
>AF064257-1|AAD55138.1| 950|Homo sapiens Dhm1-like protein protein.
Length = 950
Score = 29.9 bits (64), Expect = 8.7
Identities = 11/23 (47%), Positives = 16/23 (69%)
Frame = -2
Query: 222 PIP*LRDVTRNRFIPIKFQQPTF 154
P+P LRD+T+N + I F+ P F
Sbjct: 738 PVPMLRDLTQNTVVSINFKDPQF 760
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 97,891,693
Number of Sequences: 237096
Number of extensions: 1982391
Number of successful extensions: 3107
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 3046
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3107
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 7671262118
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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