Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= prgv0299
         (725 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF125543-1|ABL73927.1|  475|Tribolium castaneum chitinase 4 prot...    25   0.62 
AM292376-1|CAL23188.2|  402|Tribolium castaneum gustatory recept...    22   4.4  
AM292356-1|CAL23168.2|  251|Tribolium castaneum gustatory recept...    22   4.4  
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    22   4.4  
AM292332-1|CAL23144.2|  344|Tribolium castaneum gustatory recept...    22   4.4  
AM292357-1|CAL23169.2|  355|Tribolium castaneum gustatory recept...    21   7.7  

>EF125543-1|ABL73927.1|  475|Tribolium castaneum chitinase 4
           protein.
          Length = 475

 Score = 25.0 bits (52), Expect = 0.62
 Identities = 8/29 (27%), Positives = 15/29 (51%)
 Frame = +1

Query: 397 SSNAIRFEGWGSRFNYTETLELMSQGSWR 483
           + N+ ++ G      Y E +EL  +G W+
Sbjct: 284 AGNSGKYTGEAGMLGYNEIVELQKEGGWK 312


>AM292376-1|CAL23188.2|  402|Tribolium castaneum gustatory receptor
           candidate 55 protein.
          Length = 402

 Score = 22.2 bits (45), Expect = 4.4
 Identities = 13/54 (24%), Positives = 26/54 (48%)
 Frame = -1

Query: 278 LCKAHYHYTT*YKTNSLSLSLPPYVCLNI*NYATDFDAVFLNR*SD*RGSFVCI 117
           LC+ HY  T+  +  + + S+   V + +  +   F A +L   +  + SFV +
Sbjct: 233 LCRLHYKLTSVMQKINSAFSVQLLVSIGVSLFDVLFQAYYLYYVATGKASFVTV 286


>AM292356-1|CAL23168.2|  251|Tribolium castaneum gustatory receptor
           candidate 35 protein.
          Length = 251

 Score = 22.2 bits (45), Expect = 4.4
 Identities = 12/52 (23%), Positives = 23/52 (44%)
 Frame = -1

Query: 311 YFNQALCTYIFLCKAHYHYTT*YKTNSLSLSLPPYVCLNI*NYATDFDAVFL 156
           Y   ++   IF+    YH  T  + +     +  Y+  +  NY T F ++F+
Sbjct: 7   YITISMAFIIFVSLEIYHIYTVVEESGFENFVKTYLVSDFENYVTFFCSLFI 58


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 22.2 bits (45), Expect = 4.4
 Identities = 9/22 (40%), Positives = 12/22 (54%)
 Frame = +3

Query: 252 SIVIMCFAKKYVCTQSLIKIHS 317
           +  I C  KK  CT S + +HS
Sbjct: 7   TFTIKCPVKKRKCTVSNVSLHS 28


>AM292332-1|CAL23144.2|  344|Tribolium castaneum gustatory receptor
           candidate 11 protein.
          Length = 344

 Score = 22.2 bits (45), Expect = 4.4
 Identities = 13/54 (24%), Positives = 26/54 (48%)
 Frame = -1

Query: 278 LCKAHYHYTT*YKTNSLSLSLPPYVCLNI*NYATDFDAVFLNR*SD*RGSFVCI 117
           LC+ HY  T+  +  + + S+   V + +  +   F A +L   +  + SFV +
Sbjct: 233 LCRLHYKLTSVMQKINSAFSVQLLVSIGVSLFDVLFQAYYLYYVATGKASFVTV 286


>AM292357-1|CAL23169.2|  355|Tribolium castaneum gustatory receptor
           candidate 36 protein.
          Length = 355

 Score = 21.4 bits (43), Expect = 7.7
 Identities = 7/33 (21%), Positives = 18/33 (54%)
 Frame = +2

Query: 488 YVTESCYEVHVTESLNICLETILYSLCNLFRIV 586
           Y++ +CY  +    ++     I+  +C+L+ I+
Sbjct: 142 YLSVTCYVTYAWSPIDHTESNIINDMCSLYYIL 174


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 178,668
Number of Sequences: 336
Number of extensions: 3805
Number of successful extensions: 10
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 19363530
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)