Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= prgv0299
         (725 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X85217-1|CAA59483.1| 1231|Anopheles gambiae Anlar protein.             27   0.78 
CR954256-3|CAJ14144.1|  659|Anopheles gambiae cyclin protein.          26   1.0  
AJ439060-11|CAD27762.1| 1881|Anopheles gambiae putative cell-adh...    23   7.3  
AJ302656-1|CAC35521.1|  385|Anopheles gambiae gSG1b protein prot...    23   9.6  
AF283269-1|AAG15374.1|  114|Anopheles gambiae ribosomal protein ...    23   9.6  

>X85217-1|CAA59483.1| 1231|Anopheles gambiae Anlar protein.
          Length = 1231

 Score = 26.6 bits (56), Expect = 0.78
 Identities = 13/26 (50%), Positives = 17/26 (65%)
 Frame = -1

Query: 239 TNSLSLSLPPYVCLNI*NYATDFDAV 162
           T+S++LS  P + LN  NY   FDAV
Sbjct: 317 THSMTLSWAPPIRLNPINYKISFDAV 342


>CR954256-3|CAJ14144.1|  659|Anopheles gambiae cyclin protein.
          Length = 659

 Score = 26.2 bits (55), Expect = 1.0
 Identities = 10/22 (45%), Positives = 14/22 (63%)
 Frame = -2

Query: 271 KHIITILHSIKQIRFLCPYLPM 206
           + +I + H IKQ+R   P LPM
Sbjct: 142 RDVINVFHHIKQVRSQKPLLPM 163


>AJ439060-11|CAD27762.1| 1881|Anopheles gambiae putative cell-adhesion
            protein protein.
          Length = 1881

 Score = 23.4 bits (48), Expect = 7.3
 Identities = 10/15 (66%), Positives = 11/15 (73%)
 Frame = -2

Query: 388  ETGRIVVPNRADSQE 344
            ETG IVV NR D +E
Sbjct: 1008 ETGEIVVRNRIDHEE 1022


>AJ302656-1|CAC35521.1|  385|Anopheles gambiae gSG1b protein
           protein.
          Length = 385

 Score = 23.0 bits (47), Expect = 9.6
 Identities = 6/21 (28%), Positives = 14/21 (66%)
 Frame = +2

Query: 659 ITIFGWDGWDGLMGEMHQNGR 721
           + + GW+ W  ++ +++QN R
Sbjct: 140 LMLAGWNRWPQIVAQIYQNTR 160


>AF283269-1|AAG15374.1|  114|Anopheles gambiae ribosomal protein S26
           protein.
          Length = 114

 Score = 23.0 bits (47), Expect = 9.6
 Identities = 15/45 (33%), Positives = 19/45 (42%), Gaps = 2/45 (4%)
 Frame = -2

Query: 451 SRYS*NGCPTLQTESHYCFTAETGRIVVPNRADSQEXL--PPANS 323
           S YS    P L  + HYC +      VV NR+     +  PP  S
Sbjct: 56  SVYSSYVLPKLYAKLHYCVSCAIHSKVVRNRSKETRRIRTPPQRS 100


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 780,832
Number of Sequences: 2352
Number of extensions: 15140
Number of successful extensions: 11
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 74012934
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)