Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= prgv0299
         (725 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AK131203-1|BAD18395.1|  430|Homo sapiens 4.1.150).  protein.           32   2.4  
X91141-1|CAA62580.1|  862|Homo sapiens rabaptin-5 protein.             31   5.6  
BC041700-1|AAH41700.1|  862|Homo sapiens RABEP1 protein protein.       31   5.6  
BC032435-1|AAH32435.1|  716|Homo sapiens RABEP1 protein protein.       31   5.6  
AF098638-1|AAC70781.1|  829|Homo sapiens rabaptin-4 protein.           31   5.6  

>AK131203-1|BAD18395.1|  430|Homo sapiens 4.1.150).  protein.
          Length = 430

 Score = 31.9 bits (69), Expect = 2.4
 Identities = 17/57 (29%), Positives = 32/57 (56%)
 Frame = +2

Query: 428 AAVLTIPRP*NSCLKVVGGIYVTESCYEVHVTESLNICLETILYSLCNLFRIVFRST 598
           A ++TI +     ++++  IYV ++ Y +HV E   +  +T + +L N F  VF S+
Sbjct: 112 AYIITIHKELAMFVQLLRAIYVPQNVYCIHVDEKAPMKYKTAVQTLVNCFENVFISS 168


>X91141-1|CAA62580.1|  862|Homo sapiens rabaptin-5 protein.
          Length = 862

 Score = 30.7 bits (66), Expect = 5.6
 Identities = 14/41 (34%), Positives = 23/41 (56%)
 Frame = -3

Query: 657 SNSQASHQVSMTFLRCQLKAVLLNTIRNRLQREYKIVSKQM 535
           S+  +SHQ+S   LR Q   +LL  ++  L +  + V +QM
Sbjct: 588 SSEDSSHQISALVLRAQASEILLEELQQGLSQAKRDVQEQM 628


>BC041700-1|AAH41700.1|  862|Homo sapiens RABEP1 protein protein.
          Length = 862

 Score = 30.7 bits (66), Expect = 5.6
 Identities = 14/41 (34%), Positives = 23/41 (56%)
 Frame = -3

Query: 657 SNSQASHQVSMTFLRCQLKAVLLNTIRNRLQREYKIVSKQM 535
           S+  +SHQ+S   LR Q   +LL  ++  L +  + V +QM
Sbjct: 588 SSEDSSHQISALVLRAQASEILLEELQQGLSQAKRDVQEQM 628


>BC032435-1|AAH32435.1|  716|Homo sapiens RABEP1 protein protein.
          Length = 716

 Score = 30.7 bits (66), Expect = 5.6
 Identities = 14/41 (34%), Positives = 23/41 (56%)
 Frame = -3

Query: 657 SNSQASHQVSMTFLRCQLKAVLLNTIRNRLQREYKIVSKQM 535
           S+  +SHQ+S   LR Q   +LL  ++  L +  + V +QM
Sbjct: 581 SSEDSSHQISALVLRAQASEILLEELQQGLSQAKRDVQEQM 621


>AF098638-1|AAC70781.1|  829|Homo sapiens rabaptin-4 protein.
          Length = 829

 Score = 30.7 bits (66), Expect = 5.6
 Identities = 14/41 (34%), Positives = 23/41 (56%)
 Frame = -3

Query: 657 SNSQASHQVSMTFLRCQLKAVLLNTIRNRLQREYKIVSKQM 535
           S+  +SHQ+S   LR Q   +LL  ++  L +  + V +QM
Sbjct: 588 SSEDSSHQISALVLRAQASEILLEELQQGLSQAKRDVQEQM 628


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 106,450,297
Number of Sequences: 237096
Number of extensions: 2242458
Number of successful extensions: 3213
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 3055
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3213
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8567175942
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)