Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= prgv0295
(685 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q7PX03 Cluster: ENSANGP00000012023; n=1; Anopheles gamb... 81 3e-14
UniRef50_Q9UNX4 Cluster: WD repeat-containing protein 3; n=28; D... 77 4e-13
UniRef50_Q9VE98 Cluster: CG8064-PA; n=6; Endopterygota|Rep: CG80... 64 4e-09
UniRef50_UPI0000E47BAF Cluster: PREDICTED: similar to WD repeat ... 49 1e-04
UniRef50_Q5K8L8 Cluster: WD-repeat protein, putative; n=2; Filob... 43 0.008
UniRef50_P87177 Cluster: Uncharacterized WD repeat-containing pr... 43 0.008
UniRef50_Q19433 Cluster: Putative uncharacterized protein F13H8.... 40 0.043
UniRef50_A5BV00 Cluster: Putative uncharacterized protein; n=1; ... 40 0.056
UniRef50_A2XCL5 Cluster: Putative uncharacterized protein; n=2; ... 38 0.17
UniRef50_Q9VZT5 Cluster: CG14958-PA; n=4; Sophophora|Rep: CG1495... 37 0.40
UniRef50_A7AQ36 Cluster: WD domain, G-beta repeat containing pro... 37 0.40
UniRef50_Q9LVF2 Cluster: Arabidopsis thaliana genomic DNA, chrom... 35 2.1
UniRef50_Q4PFG0 Cluster: Putative uncharacterized protein; n=1; ... 34 2.8
UniRef50_A0C0Z2 Cluster: Chromosome undetermined scaffold_140, w... 34 3.7
UniRef50_Q12220 Cluster: DOM34-interacting protein 2; n=6; Sacch... 33 6.5
UniRef50_Q0HIR9 Cluster: Drug resistance transporter, Bcr/CflA s... 33 8.6
>UniRef50_Q7PX03 Cluster: ENSANGP00000012023; n=1; Anopheles gambiae
str. PEST|Rep: ENSANGP00000012023 - Anopheles gambiae
str. PEST
Length = 910
Score = 80.6 bits (190), Expect = 3e-14
Identities = 35/63 (55%), Positives = 47/63 (74%), Gaps = 1/63 (1%)
Frame = +3
Query: 81 MGLTKQYLRYAPTGSFNIIASADCNSTHVTLNGISGRYIAVGACEHVIIWDMKLGEKV-D 257
MGLTKQYL Y P SFNIIASA N + VT++ +GRY+ V A E V++WD+++GEKV +
Sbjct: 1 MGLTKQYLAYKPVSSFNIIASARANISFVTISNATGRYVVVAAAEKVLVWDLRIGEKVAE 60
Query: 258 ICK 266
C+
Sbjct: 61 FCR 63
>UniRef50_Q9UNX4 Cluster: WD repeat-containing protein 3; n=28;
Deuterostomia|Rep: WD repeat-containing protein 3 - Homo
sapiens (Human)
Length = 943
Score = 77.0 bits (181), Expect = 4e-13
Identities = 34/58 (58%), Positives = 40/58 (68%)
Frame = +3
Query: 81 MGLTKQYLRYAPTGSFNIIASADCNSTHVTLNGISGRYIAVGACEHVIIWDMKLGEKV 254
MGLTKQYLRY + F +I S N VTL G GRY+AV ACEHV IWD++ GEK+
Sbjct: 1 MGLTKQYLRYVASAVFGVIGSQKGNIVFVTLRGEKGRYVAVPACEHVFIWDLRKGEKI 58
>UniRef50_Q9VE98 Cluster: CG8064-PA; n=6; Endopterygota|Rep:
CG8064-PA - Drosophila melanogaster (Fruit fly)
Length = 922
Score = 63.7 bits (148), Expect = 4e-09
Identities = 27/57 (47%), Positives = 37/57 (64%)
Frame = +3
Query: 81 MGLTKQYLRYAPTGSFNIIASADCNSTHVTLNGISGRYIAVGACEHVIIWDMKLGEK 251
MGLTKQYL Y SFNII S N ++ GRY+A A E+VI+WD+++G++
Sbjct: 1 MGLTKQYLAYRAIDSFNIITSGRANVNFAVVDKTEGRYVAAPAAENVIVWDLRMGDR 57
>UniRef50_UPI0000E47BAF Cluster: PREDICTED: similar to WD repeat
domain 3; n=3; Strongylocentrotus purpuratus|Rep:
PREDICTED: similar to WD repeat domain 3 -
Strongylocentrotus purpuratus
Length = 615
Score = 48.8 bits (111), Expect = 1e-04
Identities = 24/58 (41%), Positives = 32/58 (55%)
Frame = +3
Query: 81 MGLTKQYLRYAPTGSFNIIASADCNSTHVTLNGISGRYIAVGACEHVIIWDMKLGEKV 254
MGLTKQYLR+ + F ++ + N ++ AV A EHVIIW +K EKV
Sbjct: 1 MGLTKQYLRFVQSAVFGVVGTTKANVVFTK----DHQFAAVSAVEHVIIWSLKRAEKV 54
>UniRef50_Q5K8L8 Cluster: WD-repeat protein, putative; n=2;
Filobasidiella neoformans|Rep: WD-repeat protein,
putative - Cryptococcus neoformans (Filobasidiella
neoformans)
Length = 988
Score = 42.7 bits (96), Expect = 0.008
Identities = 22/56 (39%), Positives = 31/56 (55%)
Frame = +3
Query: 87 LTKQYLRYAPTGSFNIIASADCNSTHVTLNGISGRYIAVGACEHVIIWDMKLGEKV 254
+ K Y+R+ PT +F II S NS++ +GR V E V++WD K GE V
Sbjct: 1 MVKSYMRHGPTQAFGIICSPTANSSY------NGRLAYVPGWEDVLVWDTKRGEMV 50
>UniRef50_P87177 Cluster: Uncharacterized WD repeat-containing
protein C3D6.12; n=1; Schizosaccharomyces pombe|Rep:
Uncharacterized WD repeat-containing protein C3D6.12 -
Schizosaccharomyces pombe (Fission yeast)
Length = 922
Score = 42.7 bits (96), Expect = 0.008
Identities = 27/73 (36%), Positives = 35/73 (47%), Gaps = 2/73 (2%)
Frame = +3
Query: 87 LTKQYLRYAPTGSFNIIASADCNSTHVTLNGIS--GRYIAVGACEHVIIWDMKLGEKVDI 260
+ K Y RY PT F +IAS+ CN + GR I VG E V+ WD+K G+ +
Sbjct: 1 MVKSYTRYEPTEFFGVIASSGCNILGQPSSSAKSVGRAI-VGGLESVLEWDLKTGQLLSK 59
Query: 261 CKYPLSGACYLCI 299
K A CI
Sbjct: 60 WKDSDCSAKVTCI 72
>UniRef50_Q19433 Cluster: Putative uncharacterized protein F13H8.2;
n=2; Caenorhabditis|Rep: Putative uncharacterized
protein F13H8.2 - Caenorhabditis elegans
Length = 929
Score = 40.3 bits (90), Expect = 0.043
Identities = 23/59 (38%), Positives = 34/59 (57%)
Frame = +3
Query: 81 MGLTKQYLRYAPTGSFNIIASADCNSTHVTLNGISGRYIAVGACEHVIIWDMKLGEKVD 257
MGLTK YL+Y GS + SA+ L I G+ +AV A E++ ++M+ EKV+
Sbjct: 1 MGLTKDYLKYEHAGSCGCVGSANGQ-----LVAIDGQTVAVSANEYLNFYNMRTAEKVN 54
>UniRef50_A5BV00 Cluster: Putative uncharacterized protein; n=1;
Vitis vinifera|Rep: Putative uncharacterized protein -
Vitis vinifera (Grape)
Length = 724
Score = 39.9 bits (89), Expect = 0.056
Identities = 19/53 (35%), Positives = 30/53 (56%)
Frame = +3
Query: 87 LTKQYLRYAPTGSFNIIASADCNSTHVTLNGISGRYIAVGACEHVIIWDMKLG 245
+ K YLRY P +F +IAS D N + + SG+++ A E V +W ++ G
Sbjct: 1 MVKAYLRYEPAAAFGVIASVDSNIAYDS----SGKHLLAPALEKVGVWHVRQG 49
>UniRef50_A2XCL5 Cluster: Putative uncharacterized protein; n=2;
Oryza sativa|Rep: Putative uncharacterized protein -
Oryza sativa subsp. indica (Rice)
Length = 964
Score = 38.3 bits (85), Expect = 0.17
Identities = 19/53 (35%), Positives = 27/53 (50%)
Frame = +3
Query: 87 LTKQYLRYAPTGSFNIIASADCNSTHVTLNGISGRYIAVGACEHVIIWDMKLG 245
+ K YLRY P SF ++AS + N + SGR + A + WD+K G
Sbjct: 1 MVKAYLRYEPAISFGVVASPESNVAY----DPSGRLLLAAALDRFAAWDLKRG 49
>UniRef50_Q9VZT5 Cluster: CG14958-PA; n=4; Sophophora|Rep:
CG14958-PA - Drosophila melanogaster (Fruit fly)
Length = 145
Score = 37.1 bits (82), Expect = 0.40
Identities = 19/63 (30%), Positives = 27/63 (42%), Gaps = 1/63 (1%)
Frame = -3
Query: 230 PNNNM-FTCSNSDVSTTNTIQCYMCAITVCTCNNIKRAGRGVPQILFS*THA*HFLFCLG 54
PN N F C++ V T + C+ +C + G+ P F+ T F FC G
Sbjct: 47 PNTNQTFVCTDGLVCTDQPVICFQRGENPASCGDTDSCGQCAPNYTFACTSRSTFAFCFG 106
Query: 53 IIT 45
IT
Sbjct: 107 AIT 109
>UniRef50_A7AQ36 Cluster: WD domain, G-beta repeat containing
protein; n=1; Babesia bovis|Rep: WD domain, G-beta
repeat containing protein - Babesia bovis
Length = 1005
Score = 37.1 bits (82), Expect = 0.40
Identities = 20/54 (37%), Positives = 27/54 (50%)
Frame = +3
Query: 87 LTKQYLRYAPTGSFNIIASADCNSTHVTLNGISGRYIAVGACEHVIIWDMKLGE 248
+ K YLRYA SF + S C S + +S YI G E V +W+ + GE
Sbjct: 1 MVKSYLRYALDDSFGTVTSRGCRS----VAALSHDYIISGHDERVSVWNCRTGE 50
>UniRef50_Q9LVF2 Cluster: Arabidopsis thaliana genomic DNA,
chromosome 3, P1 clone: MIL23; n=6; Magnoliophyta|Rep:
Arabidopsis thaliana genomic DNA, chromosome 3, P1
clone: MIL23 - Arabidopsis thaliana (Mouse-ear cress)
Length = 955
Score = 34.7 bits (76), Expect = 2.1
Identities = 18/53 (33%), Positives = 28/53 (52%)
Frame = +3
Query: 87 LTKQYLRYAPTGSFNIIASADCNSTHVTLNGISGRYIAVGACEHVIIWDMKLG 245
+ K Y RY SF +I+S D N + + +G+Y+ A E V IW ++ G
Sbjct: 1 MVKAYQRYDAATSFGVISSVDSNIAYDS----TGKYVLAPALEKVGIWHVRQG 49
>UniRef50_Q4PFG0 Cluster: Putative uncharacterized protein; n=1;
Ustilago maydis|Rep: Putative uncharacterized protein -
Ustilago maydis (Smut fungus)
Length = 1068
Score = 34.3 bits (75), Expect = 2.8
Identities = 17/51 (33%), Positives = 28/51 (54%)
Frame = +3
Query: 87 LTKQYLRYAPTGSFNIIASADCNSTHVTLNGISGRYIAVGACEHVIIWDMK 239
+ + YLR+ PT +F +I SA NS + + V A E V++WD++
Sbjct: 1 MVRSYLRHEPTSAFGLICSASANS----ILDPDTKTAFVPALEDVLVWDVR 47
>UniRef50_A0C0Z2 Cluster: Chromosome undetermined scaffold_140,
whole genome shotgun sequence; n=2; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_140,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 1256
Score = 33.9 bits (74), Expect = 3.7
Identities = 18/55 (32%), Positives = 28/55 (50%)
Frame = -1
Query: 526 FNIVSIEVLNETMQNITEGYMN*SDLHKIYLTSNFEVKLNNIYTGVSFNVNFASL 362
FN+ S+ + NI G SD+ K YL + K+N IY +S N+ F+ +
Sbjct: 146 FNVFSVYIQQNGFHNILLGSTTTSDIFKAYLLDDDTYKINQIYK-LSKNMTFSQI 199
>UniRef50_Q12220 Cluster: DOM34-interacting protein 2; n=6;
Saccharomycetales|Rep: DOM34-interacting protein 2 -
Saccharomyces cerevisiae (Baker's yeast)
Length = 943
Score = 33.1 bits (72), Expect = 6.5
Identities = 20/60 (33%), Positives = 30/60 (50%), Gaps = 4/60 (6%)
Frame = +3
Query: 87 LTKQYLRYAPTGSFNIIAS-ADC---NSTHVTLNGISGRYIAVGACEHVIIWDMKLGEKV 254
+ K Y R+ +F +IAS A+C ++ NG + A E V IWD+K G+ V
Sbjct: 1 MVKSYQRFEQAAAFGVIASNANCVWIPASSGNSNGSGPGQLITSALEDVNIWDIKTGDLV 60
>UniRef50_Q0HIR9 Cluster: Drug resistance transporter, Bcr/CflA
subfamily precursor; n=5; Shewanella|Rep: Drug
resistance transporter, Bcr/CflA subfamily precursor -
Shewanella sp. (strain MR-4)
Length = 423
Score = 32.7 bits (71), Expect = 8.6
Identities = 20/62 (32%), Positives = 31/62 (50%)
Frame = +3
Query: 72 VSSMGLTKQYLRYAPTGSFNIIASADCNSTHVTLNGISGRYIAVGACEHVIIWDMKLGEK 251
VS +G K+Y G F + + A NS + + I+ + AVGAC +IW + E+
Sbjct: 74 VSKLG--KRYALILGLGIFALASVAIANSDSILMLNIARFFQAVGACSAGVIWQAIVVEQ 131
Query: 252 VD 257
D
Sbjct: 132 YD 133
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 634,459,032
Number of Sequences: 1657284
Number of extensions: 12913770
Number of successful extensions: 26172
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 24764
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 26149
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 53305790091
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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