Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= prgv0295
         (685 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U23139-7|AAK31492.1|  929|Caenorhabditis elegans Hypothetical pr...    40   0.001
U28736-2|AAA68307.1|  620|Caenorhabditis elegans Hypothetical pr...    28   5.4  
Z49912-9|CAA90141.2| 1067|Caenorhabditis elegans Hypothetical pr...    28   7.1  
Z49912-8|CAE54898.1| 1067|Caenorhabditis elegans Hypothetical pr...    28   7.1  
Z49907-13|CAA90091.2| 1067|Caenorhabditis elegans Hypothetical p...    28   7.1  
Z49907-12|CAE54883.1| 1067|Caenorhabditis elegans Hypothetical p...    28   7.1  
AF043702-9|ABD94093.1|  237|Caenorhabditis elegans Hypothetical ...    27   9.4  

>U23139-7|AAK31492.1|  929|Caenorhabditis elegans Hypothetical
           protein F13H8.2 protein.
          Length = 929

 Score = 40.3 bits (90), Expect = 0.001
 Identities = 23/59 (38%), Positives = 34/59 (57%)
 Frame = +3

Query: 81  MGLTKQYLRYAPTGSFNIIASADCNSTHVTLNGISGRYIAVGACEHVIIWDMKLGEKVD 257
           MGLTK YL+Y   GS   + SA+       L  I G+ +AV A E++  ++M+  EKV+
Sbjct: 1   MGLTKDYLKYEHAGSCGCVGSANGQ-----LVAIDGQTVAVSANEYLNFYNMRTAEKVN 54


>U28736-2|AAA68307.1|  620|Caenorhabditis elegans Hypothetical
           protein F26A10.2 protein.
          Length = 620

 Score = 28.3 bits (60), Expect = 5.4
 Identities = 11/17 (64%), Positives = 13/17 (76%)
 Frame = -3

Query: 386 FQCKFCFTKNYTFNSNI 336
           F+CKFCF K Y F SN+
Sbjct: 76  FKCKFCF-KTYKFRSNL 91


>Z49912-9|CAA90141.2| 1067|Caenorhabditis elegans Hypothetical
           protein T24F1.6a protein.
          Length = 1067

 Score = 27.9 bits (59), Expect = 7.1
 Identities = 8/24 (33%), Positives = 16/24 (66%)
 Frame = +1

Query: 391 LLYKCYLISPQNYWLNIFYANHFN 462
           ++Y    +SP +Y+  +++ NHFN
Sbjct: 257 MMYILSTLSPNDYFFGVYFNNHFN 280


>Z49912-8|CAE54898.1| 1067|Caenorhabditis elegans Hypothetical
           protein T24F1.6b protein.
          Length = 1067

 Score = 27.9 bits (59), Expect = 7.1
 Identities = 8/24 (33%), Positives = 16/24 (66%)
 Frame = +1

Query: 391 LLYKCYLISPQNYWLNIFYANHFN 462
           ++Y    +SP +Y+  +++ NHFN
Sbjct: 257 MMYILSTLSPNDYFFGVYFNNHFN 280


>Z49907-13|CAA90091.2| 1067|Caenorhabditis elegans Hypothetical
           protein T24F1.6a protein.
          Length = 1067

 Score = 27.9 bits (59), Expect = 7.1
 Identities = 8/24 (33%), Positives = 16/24 (66%)
 Frame = +1

Query: 391 LLYKCYLISPQNYWLNIFYANHFN 462
           ++Y    +SP +Y+  +++ NHFN
Sbjct: 257 MMYILSTLSPNDYFFGVYFNNHFN 280


>Z49907-12|CAE54883.1| 1067|Caenorhabditis elegans Hypothetical
           protein T24F1.6b protein.
          Length = 1067

 Score = 27.9 bits (59), Expect = 7.1
 Identities = 8/24 (33%), Positives = 16/24 (66%)
 Frame = +1

Query: 391 LLYKCYLISPQNYWLNIFYANHFN 462
           ++Y    +SP +Y+  +++ NHFN
Sbjct: 257 MMYILSTLSPNDYFFGVYFNNHFN 280


>AF043702-9|ABD94093.1|  237|Caenorhabditis elegans Hypothetical
           protein W03D8.11 protein.
          Length = 237

 Score = 27.5 bits (58), Expect = 9.4
 Identities = 10/17 (58%), Positives = 13/17 (76%)
 Frame = -2

Query: 300 KYINNRPRIKGIYIYLP 250
           K++NNR  I GIY+ LP
Sbjct: 94  KFVNNRKEINGIYLPLP 110


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,296,035
Number of Sequences: 27780
Number of extensions: 334303
Number of successful extensions: 685
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 633
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 685
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1560745544
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)