Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= prgv0294
(689 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X16064-1|CAA34200.1| 172|Homo sapiens protein ( Human mRNA for ... 99 2e-20
CR457036-1|CAG33317.1| 172|Homo sapiens TPT1 protein. 99 2e-20
BC052333-1|AAH52333.1| 172|Homo sapiens tumor protein, translat... 99 2e-20
BC003352-1|AAH03352.1| 172|Homo sapiens tumor protein, translat... 99 2e-20
AY334563-1|AAQ01550.1| 172|Homo sapiens TCTP protein. 99 2e-20
AY117678-1|AAM51565.1| 172|Homo sapiens p02 protein protein. 99 2e-20
AL138963-4|CAH72035.1| 188|Homo sapiens tumor protein, translat... 99 2e-20
AL138963-3|CAH72034.1| 172|Homo sapiens tumor protein, translat... 99 2e-20
AJ400717-1|CAB87812.1| 172|Homo sapiens translationally control... 99 2e-20
BC012431-1|AAH12431.1| 172|Homo sapiens tumor protein, translat... 96 1e-19
BC022436-1|AAH22436.1| 138|Homo sapiens TPT1 protein protein. 85 2e-16
AL138963-2|CAH72033.1| 138|Homo sapiens tumor protein, translat... 85 2e-16
AY572224-1|AAS76644.1| 140|Homo sapiens TPT1-like protein protein. 65 3e-10
AK126598-1|BAC86606.1| 140|Homo sapiens protein ( Homo sapiens ... 65 3e-10
AY121805-1|AAM82753.1| 412|Homo sapiens BJ-HCC-24 tumor antigen... 50 1e-05
AK000037-1|BAA90897.1| 412|Homo sapiens protein ( Homo sapiens ... 50 1e-05
BC040008-1|AAH40008.1| 64|Homo sapiens TPT1 protein protein. 36 0.18
AF072098-1|AAD48084.1| 114|Homo sapiens HDCMB21P protein. 34 0.55
BC117259-1|AAI17260.1| 1581|Homo sapiens LOC200383 protein protein. 31 5.1
AK027182-1|BAB15685.1| 366|Homo sapiens protein ( Homo sapiens ... 31 5.1
AB051484-1|BAB21788.2| 2182|Homo sapiens KIAA1697 protein protein. 31 5.1
>X16064-1|CAA34200.1| 172|Homo sapiens protein ( Human mRNA for
translationally controlled tumor protein. ).
Length = 172
Score = 98.7 bits (235), Expect = 2e-20
Identities = 58/138 (42%), Positives = 84/138 (60%), Gaps = 4/138 (2%)
Frame = -3
Query: 657 SDTYKMK-LVDEVIYEVTGRLVTRAQGDIPDR---GF*SFXXXXXXXXXXXXXXGVDIVL 490
SD YK++ + D + EV G++V+R +G+I D G S GVDIV+
Sbjct: 15 SDIYKIREIADGLCLEVEGKMVSRTEGNIDDSLIGGNASAEGPEGEGTESTVITGVDIVM 74
Query: 489 NHRLVETYAFGDKKSYTLYLKDYMKKLVAKLEEKAPDQVEVFKTNMNKVMKDILGRFKEL 310
NH L ET +F K++Y Y+KDYMK + KLEE+ P++V+ F T + +K IL FK
Sbjct: 75 NHHLQET-SF-TKEAYKKYIKDYMKSIKGKLEEQRPERVKPFMTGAAEQIKHILANFKNY 132
Query: 309 QFFTGESMDCDGMVAMME 256
QFF GE+M+ DGMVA+++
Sbjct: 133 QFFIGENMNPDGMVALLD 150
>CR457036-1|CAG33317.1| 172|Homo sapiens TPT1 protein.
Length = 172
Score = 98.7 bits (235), Expect = 2e-20
Identities = 58/138 (42%), Positives = 84/138 (60%), Gaps = 4/138 (2%)
Frame = -3
Query: 657 SDTYKMK-LVDEVIYEVTGRLVTRAQGDIPDR---GF*SFXXXXXXXXXXXXXXGVDIVL 490
SD YK++ + D + EV G++V+R +G+I D G S GVDIV+
Sbjct: 15 SDIYKIREIADGLCLEVEGKMVSRTEGNIDDSLIGGNASAEGPEGEGTESTVITGVDIVM 74
Query: 489 NHRLVETYAFGDKKSYTLYLKDYMKKLVAKLEEKAPDQVEVFKTNMNKVMKDILGRFKEL 310
NH L ET +F K++Y Y+KDYMK + KLEE+ P++V+ F T + +K IL FK
Sbjct: 75 NHHLQET-SF-TKEAYKKYIKDYMKSIKGKLEEQRPERVKPFMTGAAEQIKHILANFKNY 132
Query: 309 QFFTGESMDCDGMVAMME 256
QFF GE+M+ DGMVA+++
Sbjct: 133 QFFIGENMNPDGMVALLD 150
>BC052333-1|AAH52333.1| 172|Homo sapiens tumor protein,
translationally-controlled 1 protein.
Length = 172
Score = 98.7 bits (235), Expect = 2e-20
Identities = 58/138 (42%), Positives = 84/138 (60%), Gaps = 4/138 (2%)
Frame = -3
Query: 657 SDTYKMK-LVDEVIYEVTGRLVTRAQGDIPDR---GF*SFXXXXXXXXXXXXXXGVDIVL 490
SD YK++ + D + EV G++V+R +G+I D G S GVDIV+
Sbjct: 15 SDIYKIREIADGLCLEVEGKMVSRTEGNIDDSLIGGNASAEGPEGEGTESTVITGVDIVM 74
Query: 489 NHRLVETYAFGDKKSYTLYLKDYMKKLVAKLEEKAPDQVEVFKTNMNKVMKDILGRFKEL 310
NH L ET +F K++Y Y+KDYMK + KLEE+ P++V+ F T + +K IL FK
Sbjct: 75 NHHLQET-SF-TKEAYKKYIKDYMKSIKGKLEEQRPERVKPFMTGAAEQIKHILANFKNY 132
Query: 309 QFFTGESMDCDGMVAMME 256
QFF GE+M+ DGMVA+++
Sbjct: 133 QFFIGENMNPDGMVALLD 150
>BC003352-1|AAH03352.1| 172|Homo sapiens tumor protein,
translationally-controlled 1 protein.
Length = 172
Score = 98.7 bits (235), Expect = 2e-20
Identities = 58/138 (42%), Positives = 84/138 (60%), Gaps = 4/138 (2%)
Frame = -3
Query: 657 SDTYKMK-LVDEVIYEVTGRLVTRAQGDIPDR---GF*SFXXXXXXXXXXXXXXGVDIVL 490
SD YK++ + D + EV G++V+R +G+I D G S GVDIV+
Sbjct: 15 SDIYKIREIADGLCLEVEGKMVSRTEGNIDDSLIGGNASAEGPEGEGTESTVITGVDIVM 74
Query: 489 NHRLVETYAFGDKKSYTLYLKDYMKKLVAKLEEKAPDQVEVFKTNMNKVMKDILGRFKEL 310
NH L ET +F K++Y Y+KDYMK + KLEE+ P++V+ F T + +K IL FK
Sbjct: 75 NHHLQET-SF-TKEAYKKYIKDYMKSIKGKLEEQRPERVKPFMTGAAEQIKHILANFKNY 132
Query: 309 QFFTGESMDCDGMVAMME 256
QFF GE+M+ DGMVA+++
Sbjct: 133 QFFIGENMNPDGMVALLD 150
>AY334563-1|AAQ01550.1| 172|Homo sapiens TCTP protein.
Length = 172
Score = 98.7 bits (235), Expect = 2e-20
Identities = 58/138 (42%), Positives = 84/138 (60%), Gaps = 4/138 (2%)
Frame = -3
Query: 657 SDTYKMK-LVDEVIYEVTGRLVTRAQGDIPDR---GF*SFXXXXXXXXXXXXXXGVDIVL 490
SD YK++ + D + EV G++V+R +G+I D G S GVDIV+
Sbjct: 15 SDIYKIREIADGLCLEVEGKMVSRTEGNIDDSLIGGNASAEGPEGEGTESTVITGVDIVM 74
Query: 489 NHRLVETYAFGDKKSYTLYLKDYMKKLVAKLEEKAPDQVEVFKTNMNKVMKDILGRFKEL 310
NH L ET +F K++Y Y+KDYMK + KLEE+ P++V+ F T + +K IL FK
Sbjct: 75 NHHLQET-SF-TKEAYKKYIKDYMKSIKGKLEEQRPERVKPFMTGAAEQIKHILANFKNY 132
Query: 309 QFFTGESMDCDGMVAMME 256
QFF GE+M+ DGMVA+++
Sbjct: 133 QFFIGENMNPDGMVALLD 150
>AY117678-1|AAM51565.1| 172|Homo sapiens p02 protein protein.
Length = 172
Score = 98.7 bits (235), Expect = 2e-20
Identities = 58/138 (42%), Positives = 84/138 (60%), Gaps = 4/138 (2%)
Frame = -3
Query: 657 SDTYKMK-LVDEVIYEVTGRLVTRAQGDIPDR---GF*SFXXXXXXXXXXXXXXGVDIVL 490
SD YK++ + D + EV G++V+R +G+I D G S GVDIV+
Sbjct: 15 SDIYKIREIADGLCLEVEGKMVSRTEGNIDDSLIGGNASAEGPEGEGTESTVITGVDIVM 74
Query: 489 NHRLVETYAFGDKKSYTLYLKDYMKKLVAKLEEKAPDQVEVFKTNMNKVMKDILGRFKEL 310
NH L ET +F K++Y Y+KDYMK + KLEE+ P++V+ F T + +K IL FK
Sbjct: 75 NHHLQET-SF-TKEAYKKYIKDYMKSIKGKLEEQRPERVKPFMTGAAEQIKHILANFKNY 132
Query: 309 QFFTGESMDCDGMVAMME 256
QFF GE+M+ DGMVA+++
Sbjct: 133 QFFIGENMNPDGMVALLD 150
>AL138963-4|CAH72035.1| 188|Homo sapiens tumor protein,
translationally-controlled 1 protein.
Length = 188
Score = 98.7 bits (235), Expect = 2e-20
Identities = 58/138 (42%), Positives = 84/138 (60%), Gaps = 4/138 (2%)
Frame = -3
Query: 657 SDTYKMK-LVDEVIYEVTGRLVTRAQGDIPDR---GF*SFXXXXXXXXXXXXXXGVDIVL 490
SD YK++ + D + EV G++V+R +G+I D G S GVDIV+
Sbjct: 15 SDIYKIREIADGLCLEVEGKMVSRTEGNIDDSLIGGNASAEGPEGEGTESTVITGVDIVM 74
Query: 489 NHRLVETYAFGDKKSYTLYLKDYMKKLVAKLEEKAPDQVEVFKTNMNKVMKDILGRFKEL 310
NH L ET +F K++Y Y+KDYMK + KLEE+ P++V+ F T + +K IL FK
Sbjct: 75 NHHLQET-SF-TKEAYKKYIKDYMKSIKGKLEEQRPERVKPFMTGAAEQIKHILANFKNY 132
Query: 309 QFFTGESMDCDGMVAMME 256
QFF GE+M+ DGMVA+++
Sbjct: 133 QFFIGENMNPDGMVALLD 150
>AL138963-3|CAH72034.1| 172|Homo sapiens tumor protein,
translationally-controlled 1 protein.
Length = 172
Score = 98.7 bits (235), Expect = 2e-20
Identities = 58/138 (42%), Positives = 84/138 (60%), Gaps = 4/138 (2%)
Frame = -3
Query: 657 SDTYKMK-LVDEVIYEVTGRLVTRAQGDIPDR---GF*SFXXXXXXXXXXXXXXGVDIVL 490
SD YK++ + D + EV G++V+R +G+I D G S GVDIV+
Sbjct: 15 SDIYKIREIADGLCLEVEGKMVSRTEGNIDDSLIGGNASAEGPEGEGTESTVITGVDIVM 74
Query: 489 NHRLVETYAFGDKKSYTLYLKDYMKKLVAKLEEKAPDQVEVFKTNMNKVMKDILGRFKEL 310
NH L ET +F K++Y Y+KDYMK + KLEE+ P++V+ F T + +K IL FK
Sbjct: 75 NHHLQET-SF-TKEAYKKYIKDYMKSIKGKLEEQRPERVKPFMTGAAEQIKHILANFKNY 132
Query: 309 QFFTGESMDCDGMVAMME 256
QFF GE+M+ DGMVA+++
Sbjct: 133 QFFIGENMNPDGMVALLD 150
>AJ400717-1|CAB87812.1| 172|Homo sapiens translationally controlled
tumor protein (TCTP) protein.
Length = 172
Score = 98.7 bits (235), Expect = 2e-20
Identities = 58/138 (42%), Positives = 84/138 (60%), Gaps = 4/138 (2%)
Frame = -3
Query: 657 SDTYKMK-LVDEVIYEVTGRLVTRAQGDIPDR---GF*SFXXXXXXXXXXXXXXGVDIVL 490
SD YK++ + D + EV G++V+R +G+I D G S GVDIV+
Sbjct: 15 SDIYKIREIADGLCLEVEGKMVSRTEGNIDDSLIGGNASAEGPEGEGTESTVITGVDIVM 74
Query: 489 NHRLVETYAFGDKKSYTLYLKDYMKKLVAKLEEKAPDQVEVFKTNMNKVMKDILGRFKEL 310
NH L ET +F K++Y Y+KDYMK + KLEE+ P++V+ F T + +K IL FK
Sbjct: 75 NHHLQET-SF-TKEAYKKYIKDYMKSIKGKLEEQRPERVKPFMTGAAEQIKHILANFKNY 132
Query: 309 QFFTGESMDCDGMVAMME 256
QFF GE+M+ DGMVA+++
Sbjct: 133 QFFIGENMNPDGMVALLD 150
>BC012431-1|AAH12431.1| 172|Homo sapiens tumor protein,
translationally-controlled 1 protein.
Length = 172
Score = 95.9 bits (228), Expect = 1e-19
Identities = 57/138 (41%), Positives = 83/138 (60%), Gaps = 4/138 (2%)
Frame = -3
Query: 657 SDTYKMK-LVDEVIYEVTGRLVTRAQGDIPDR---GF*SFXXXXXXXXXXXXXXGVDIVL 490
SD YK++ + D + EV G++V+R +G+I D G GVDIV+
Sbjct: 15 SDIYKIREIADGLCLEVEGKMVSRTEGNIDDSLIGGNAYGEGPEGEGTESTVITGVDIVM 74
Query: 489 NHRLVETYAFGDKKSYTLYLKDYMKKLVAKLEEKAPDQVEVFKTNMNKVMKDILGRFKEL 310
NH L ET +F K++Y Y+KDYMK + KLEE+ P++V+ F T + +K IL FK
Sbjct: 75 NHHLQET-SF-TKEAYKKYIKDYMKSIKGKLEEQRPERVKPFMTGAAEQIKHILANFKNY 132
Query: 309 QFFTGESMDCDGMVAMME 256
QFF GE+M+ DGMVA+++
Sbjct: 133 QFFIGENMNPDGMVALLD 150
>BC022436-1|AAH22436.1| 138|Homo sapiens TPT1 protein protein.
Length = 138
Score = 85.0 bits (201), Expect = 2e-16
Identities = 42/83 (50%), Positives = 59/83 (71%)
Frame = -3
Query: 504 VDIVLNHRLVETYAFGDKKSYTLYLKDYMKKLVAKLEEKAPDQVEVFKTNMNKVMKDILG 325
VDIV+NH L ET +F K++Y Y+KDYMK + KLEE+ P++V+ F T + +K IL
Sbjct: 36 VDIVMNHHLQET-SF-TKEAYKKYIKDYMKSIKGKLEEQRPERVKPFMTGAAEQIKHILA 93
Query: 324 RFKELQFFTGESMDCDGMVAMME 256
FK QFF GE+M+ DGMVA+++
Sbjct: 94 NFKNYQFFIGENMNPDGMVALLD 116
>AL138963-2|CAH72033.1| 138|Homo sapiens tumor protein,
translationally-controlled 1 protein.
Length = 138
Score = 85.0 bits (201), Expect = 2e-16
Identities = 42/83 (50%), Positives = 59/83 (71%)
Frame = -3
Query: 504 VDIVLNHRLVETYAFGDKKSYTLYLKDYMKKLVAKLEEKAPDQVEVFKTNMNKVMKDILG 325
VDIV+NH L ET +F K++Y Y+KDYMK + KLEE+ P++V+ F T + +K IL
Sbjct: 36 VDIVMNHHLQET-SF-TKEAYKKYIKDYMKSIKGKLEEQRPERVKPFMTGAAEQIKHILA 93
Query: 324 RFKELQFFTGESMDCDGMVAMME 256
FK QFF GE+M+ DGMVA+++
Sbjct: 94 NFKNYQFFIGENMNPDGMVALLD 116
>AY572224-1|AAS76644.1| 140|Homo sapiens TPT1-like protein protein.
Length = 140
Score = 64.9 bits (151), Expect = 3e-10
Identities = 45/121 (37%), Positives = 65/121 (53%), Gaps = 4/121 (3%)
Frame = -3
Query: 657 SDTY-KMKLVDEVIYEVTGRLVTRAQGDIPDR---GF*SFXXXXXXXXXXXXXXGVDIVL 490
SD+Y ++ D + EV G++V+R +G+I D G S GVD V+
Sbjct: 20 SDSYMSQEIADGLRLEVEGKIVSRTEGNIFDSLIGGNASAEGPEGKGTESTVITGVDSVM 79
Query: 489 NHRLVETYAFGDKKSYTLYLKDYMKKLVAKLEEKAPDQVEVFKTNMNKVMKDILGRFKEL 310
NH L ET +F K++Y +KDYMK + KLEE+ P +V+ F T + +K IL FK
Sbjct: 80 NHHLQET-SF-TKEAYNKCIKDYMKSIKGKLEEQRPKRVKPFMTGAAEQIKHILANFKNY 137
Query: 309 Q 307
Q
Sbjct: 138 Q 138
>AK126598-1|BAC86606.1| 140|Homo sapiens protein ( Homo sapiens
cDNA FLJ44635 fis, clone BRACE2023744, highly similar
to Translationally controlled tumor protein. ).
Length = 140
Score = 64.9 bits (151), Expect = 3e-10
Identities = 45/121 (37%), Positives = 65/121 (53%), Gaps = 4/121 (3%)
Frame = -3
Query: 657 SDTY-KMKLVDEVIYEVTGRLVTRAQGDIPDR---GF*SFXXXXXXXXXXXXXXGVDIVL 490
SD+Y ++ D + EV G++V+R +G+I D G S GVD V+
Sbjct: 20 SDSYMSQEIADGLRLEVEGKIVSRTEGNIFDSLIGGNASAEGPEGKGTESTVITGVDSVM 79
Query: 489 NHRLVETYAFGDKKSYTLYLKDYMKKLVAKLEEKAPDQVEVFKTNMNKVMKDILGRFKEL 310
NH L ET +F K++Y +KDYMK + KLEE+ P +V+ F T + +K IL FK
Sbjct: 80 NHHLQET-SF-TKEAYNKCIKDYMKSIKGKLEEQRPKRVKPFMTGAAEQIKHILANFKNY 137
Query: 309 Q 307
Q
Sbjct: 138 Q 138
>AY121805-1|AAM82753.1| 412|Homo sapiens BJ-HCC-24 tumor antigen
protein.
Length = 412
Score = 49.6 bits (113), Expect = 1e-05
Identities = 25/73 (34%), Positives = 45/73 (61%), Gaps = 1/73 (1%)
Frame = -3
Query: 471 TYAFGDKKSYTLYLKDYMKKLVAKL-EEKAPDQVEVFKTNMNKVMKDILGRFKELQFFTG 295
+Y G + + + + + K++ L +E+ P++V+ F T + +K IL FK QFF G
Sbjct: 318 SYDAGGEALVSCGMMEALLKVIKFLGDEQRPERVKPFMTGAAEQIKHILANFKNYQFFIG 377
Query: 294 ESMDCDGMVAMME 256
E+M+ DGMVA+++
Sbjct: 378 ENMNPDGMVALLD 390
>AK000037-1|BAA90897.1| 412|Homo sapiens protein ( Homo sapiens
cDNA FLJ20030 fis, clone ADSU02156. ).
Length = 412
Score = 49.6 bits (113), Expect = 1e-05
Identities = 25/73 (34%), Positives = 45/73 (61%), Gaps = 1/73 (1%)
Frame = -3
Query: 471 TYAFGDKKSYTLYLKDYMKKLVAKL-EEKAPDQVEVFKTNMNKVMKDILGRFKELQFFTG 295
+Y G + + + + + K++ L +E+ P++V+ F T + +K IL FK QFF G
Sbjct: 318 SYDAGGEALVSCGMMEALLKVIKFLGDEQRPERVKPFMTGAAEQIKHILANFKNYQFFIG 377
Query: 294 ESMDCDGMVAMME 256
E+M+ DGMVA+++
Sbjct: 378 ENMNPDGMVALLD 390
>BC040008-1|AAH40008.1| 64|Homo sapiens TPT1 protein protein.
Length = 64
Score = 35.5 bits (78), Expect = 0.18
Identities = 18/30 (60%), Positives = 23/30 (76%)
Frame = -3
Query: 504 VDIVLNHRLVETYAFGDKKSYTLYLKDYMK 415
VDIV+NH L ET +F K++Y Y+KDYMK
Sbjct: 36 VDIVMNHHLQET-SF-TKEAYKKYIKDYMK 63
>AF072098-1|AAD48084.1| 114|Homo sapiens HDCMB21P protein.
Length = 114
Score = 33.9 bits (74), Expect = 0.55
Identities = 29/88 (32%), Positives = 42/88 (47%), Gaps = 5/88 (5%)
Frame = -3
Query: 657 SDTYKMK-LVDEVIYEVTGRLVTRAQGDIPDR---GF*SFXXXXXXXXXXXXXXGVDIVL 490
SD YK++ + D + EV G++V+R +G+ D G S GVDIV+
Sbjct: 15 SDIYKIREIADGLCLEVEGKMVSRTEGNNDDSLIGGNASAEGPEGEGTESTVITGVDIVM 74
Query: 489 NHRLVET-YAFGDKKSYTLYLKDYMKKL 409
NH L ET +A D + K M K+
Sbjct: 75 NHHLQETSFAKEDDRRAAKSGKGCMNKM 102
>BC117259-1|AAI17260.1| 1581|Homo sapiens LOC200383 protein protein.
Length = 1581
Score = 30.7 bits (66), Expect = 5.1
Identities = 12/48 (25%), Positives = 29/48 (60%)
Frame = -3
Query: 426 DYMKKLVAKLEEKAPDQVEVFKTNMNKVMKDILGRFKELQFFTGESMD 283
+ +++LVA ++ + P+++E+ + + +KD+ GR L G+ +D
Sbjct: 1279 EIVQELVASVQTRVPEKLEMEGASESLFVKDLQGRLNSLTTVLGQEVD 1326
>AK027182-1|BAB15685.1| 366|Homo sapiens protein ( Homo sapiens
cDNA: FLJ23529 fis, clone LNG06042. ).
Length = 366
Score = 30.7 bits (66), Expect = 5.1
Identities = 12/48 (25%), Positives = 29/48 (60%)
Frame = -3
Query: 426 DYMKKLVAKLEEKAPDQVEVFKTNMNKVMKDILGRFKELQFFTGESMD 283
+ +++LVA ++ + P+++E+ + + +KD+ GR L G+ +D
Sbjct: 64 EIVQELVASVQTRVPEKLEMEGASESLFVKDLQGRLNSLTTVLGQEVD 111
>AB051484-1|BAB21788.2| 2182|Homo sapiens KIAA1697 protein protein.
Length = 2182
Score = 30.7 bits (66), Expect = 5.1
Identities = 12/48 (25%), Positives = 29/48 (60%)
Frame = -3
Query: 426 DYMKKLVAKLEEKAPDQVEVFKTNMNKVMKDILGRFKELQFFTGESMD 283
+ +++LVA ++ + P+++E+ + + +KD+ GR L G+ +D
Sbjct: 1880 EIVQELVASVQTRVPEKLEMEGASESLFVKDLQGRLNSLTTVLGQEVD 1927
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 93,993,307
Number of Sequences: 237096
Number of extensions: 1839389
Number of successful extensions: 3139
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 3021
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3126
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 7895240574
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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