Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= prgv0292
         (604 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_A4FSG8 Cluster: Putative uncharacterized protein; n=1; ...    75   2e-12
UniRef50_A5Z1D8 Cluster: Putative uncharacterized protein; n=1; ...    44   0.003
UniRef50_A7FPQ7 Cluster: Conserved domain protein; n=3; Clostrid...    37   0.42 
UniRef50_O15792 Cluster: CG2; n=89; Plasmodium falciparum|Rep: C...    33   6.9  

>UniRef50_A4FSG8 Cluster: Putative uncharacterized protein; n=1;
           Thermobia domestica|Rep: Putative uncharacterized
           protein - Thermobia domestica (firebrat)
          Length = 53

 Score = 74.5 bits (175), Expect = 2e-12
 Identities = 35/53 (66%), Positives = 43/53 (81%)
 Frame = +3

Query: 279 LIKRKNYLRDNSVIFFFSSNKKKSLRPRCWIKIKFKCRSLKF*SVRSLKSYMI 437
           +I R +YLRDNSVIFF +S +++ LRPRCWIKI  +CRSL + SVR LKSYMI
Sbjct: 1   MIVRLSYLRDNSVIFFENSYRQERLRPRCWIKILSRCRSLVYRSVRPLKSYMI 53


>UniRef50_A5Z1D8 Cluster: Putative uncharacterized protein; n=1;
           Haemaphysalis qinghaiensis|Rep: Putative uncharacterized
           protein - Haemaphysalis qinghaiensis
          Length = 30

 Score = 44.0 bits (99), Expect = 0.003
 Identities = 19/30 (63%), Positives = 22/30 (73%)
 Frame = +2

Query: 386 M*KFKILICSIIKILHDLSSNRCEPGWFLS 475
           M K K  +CS  +ILHDLS +RCE GWFLS
Sbjct: 1   MKKLKKEVCSTFEILHDLSLDRCESGWFLS 30


>UniRef50_A7FPQ7 Cluster: Conserved domain protein; n=3; Clostridium
           botulinum A|Rep: Conserved domain protein - Clostridium
           botulinum (strain ATCC 19397 / Type A)
          Length = 479

 Score = 36.7 bits (81), Expect = 0.42
 Identities = 16/39 (41%), Positives = 24/39 (61%)
 Frame = +2

Query: 395 FKILICSIIKILHDLSSNRCEPGWFLSFNIYNILVRKDK 511
           +KI    IIK+++ L  N CE G+  SFN YN + ++ K
Sbjct: 277 YKISDYRIIKLINALEDNSCEVGYHYSFNSYNSISKRSK 315


>UniRef50_O15792 Cluster: CG2; n=89; Plasmodium falciparum|Rep: CG2 -
            Plasmodium falciparum
          Length = 2819

 Score = 32.7 bits (71), Expect = 6.9
 Identities = 18/41 (43%), Positives = 22/41 (53%)
 Frame = +3

Query: 309  NSVIFFFSSNKKKSLRPRCWIKIKFKCRSLKF*SVRSLKSY 431
            N+ I FF + + K L  R  IK  F  RSLKF     +KSY
Sbjct: 2127 NNYIMFFQTTQNKYLLNRRLIKKAFFLRSLKFDDFNDIKSY 2167


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 383,685,281
Number of Sequences: 1657284
Number of extensions: 5797071
Number of successful extensions: 8887
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 8718
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8886
length of database: 575,637,011
effective HSP length: 97
effective length of database: 414,880,463
effective search space used: 42732687689
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)