Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= prgv0291
         (690 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY903308-1|AAX48940.1|  241|Anopheles gambiae female-specific do...    25   1.7  
AY903307-1|AAX48939.1|  283|Anopheles gambiae male-specific doub...    25   1.7  
AJ439060-8|CAD27759.1|  808|Anopheles gambiae putative V-ATPase ...    25   1.7  
DQ137802-1|AAZ78363.1|  265|Anopheles gambiae female-specific do...    23   6.9  
DQ137801-1|AAZ78362.1|  622|Anopheles gambiae male-specific doub...    23   6.9  

>AY903308-1|AAX48940.1|  241|Anopheles gambiae female-specific
           doublesex protein protein.
          Length = 241

 Score = 25.4 bits (53), Expect = 1.7
 Identities = 15/51 (29%), Positives = 25/51 (49%)
 Frame = -3

Query: 208 GDTMAAWCNFSVRQDCSRPPNVP*TNSHKLEININNRSVFCRWPPRAAQSQ 56
           G+  A+ CN S+      PPN     +H L+I +     +C++  RA Q +
Sbjct: 22  GNGAASSCNNSLNP--RTPPNCARCRNHGLKIGLKGHKRYCKY--RACQCE 68


>AY903307-1|AAX48939.1|  283|Anopheles gambiae male-specific
           doublesex protein protein.
          Length = 283

 Score = 25.4 bits (53), Expect = 1.7
 Identities = 15/51 (29%), Positives = 25/51 (49%)
 Frame = -3

Query: 208 GDTMAAWCNFSVRQDCSRPPNVP*TNSHKLEININNRSVFCRWPPRAAQSQ 56
           G+  A+ CN S+      PPN     +H L+I +     +C++  RA Q +
Sbjct: 22  GNGAASSCNNSLNP--RTPPNCARCRNHGLKIGLKGHKRYCKY--RACQCE 68


>AJ439060-8|CAD27759.1|  808|Anopheles gambiae putative V-ATPase
           protein.
          Length = 808

 Score = 25.4 bits (53), Expect = 1.7
 Identities = 12/32 (37%), Positives = 16/32 (50%)
 Frame = +1

Query: 7   EVKHATRICEVEPSDKIEIEQLSAATGRILND 102
           E+KH     +V  SDK  ++ L A  G   ND
Sbjct: 128 ELKHVLEKTQVFFSDKSNVQNLEATGGEAAND 159


>DQ137802-1|AAZ78363.1|  265|Anopheles gambiae female-specific
           doublesex protein protein.
          Length = 265

 Score = 23.4 bits (48), Expect = 6.9
 Identities = 11/43 (25%), Positives = 21/43 (48%)
 Frame = -3

Query: 208 GDTMAAWCNFSVRQDCSRPPNVP*TNSHKLEININNRSVFCRW 80
           G+  ++ CN S+      PPN     +H L+I +     +C++
Sbjct: 22  GNGASSSCNNSLNP--RTPPNCARCRNHGLKIGLKGHKRYCKY 62


>DQ137801-1|AAZ78362.1|  622|Anopheles gambiae male-specific
           doublesex protein protein.
          Length = 622

 Score = 23.4 bits (48), Expect = 6.9
 Identities = 11/43 (25%), Positives = 21/43 (48%)
 Frame = -3

Query: 208 GDTMAAWCNFSVRQDCSRPPNVP*TNSHKLEININNRSVFCRW 80
           G+  ++ CN S+      PPN     +H L+I +     +C++
Sbjct: 22  GNGASSSCNNSLNP--RTPPNCARCRNHGLKIGLKGHKRYCKY 62


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 660,637
Number of Sequences: 2352
Number of extensions: 11902
Number of successful extensions: 14
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 69831885
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)