Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= prgv0290
(693 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_5903| Best HMM Match : No HMM Matches (HMM E-Value=.) 163 9e-41
SB_33442| Best HMM Match : AAA (HMM E-Value=0) 122 4e-28
SB_33584| Best HMM Match : No HMM Matches (HMM E-Value=.) 110 9e-25
SB_9909| Best HMM Match : AAA (HMM E-Value=0) 108 4e-24
SB_3919| Best HMM Match : No HMM Matches (HMM E-Value=.) 103 1e-22
SB_7424| Best HMM Match : AAA (HMM E-Value=0) 85 4e-17
SB_45627| Best HMM Match : AAA (HMM E-Value=0) 85 7e-17
SB_14682| Best HMM Match : No HMM Matches (HMM E-Value=.) 83 3e-16
SB_40956| Best HMM Match : No HMM Matches (HMM E-Value=.) 76 3e-14
SB_37200| Best HMM Match : No HMM Matches (HMM E-Value=.) 75 4e-14
SB_19460| Best HMM Match : AAA (HMM E-Value=0) 75 4e-14
SB_3115| Best HMM Match : AAA (HMM E-Value=0) 75 5e-14
SB_48561| Best HMM Match : AAA (HMM E-Value=0) 72 5e-13
SB_49367| Best HMM Match : AAA (HMM E-Value=0) 69 3e-12
SB_35973| Best HMM Match : zf-CCHC (HMM E-Value=0.0026) 66 3e-11
SB_55690| Best HMM Match : AAA (HMM E-Value=0) 63 2e-10
SB_33907| Best HMM Match : No HMM Matches (HMM E-Value=.) 60 2e-09
SB_56202| Best HMM Match : No HMM Matches (HMM E-Value=.) 60 2e-09
SB_17703| Best HMM Match : Mito_carr (HMM E-Value=0) 60 2e-09
SB_30385| Best HMM Match : No HMM Matches (HMM E-Value=.) 56 4e-08
SB_3478| Best HMM Match : No HMM Matches (HMM E-Value=.) 55 6e-08
SB_35704| Best HMM Match : No HMM Matches (HMM E-Value=.) 54 8e-08
SB_28977| Best HMM Match : AAA (HMM E-Value=0) 52 4e-07
SB_11032| Best HMM Match : AAA (HMM E-Value=3.5) 50 2e-06
SB_732| Best HMM Match : AAA (HMM E-Value=0) 44 2e-04
SB_31892| Best HMM Match : AAA (HMM E-Value=6.2e-25) 39 0.003
SB_46732| Best HMM Match : AAA (HMM E-Value=0.044) 38 0.010
SB_34296| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.17
SB_27238| Best HMM Match : DUF433 (HMM E-Value=8.2) 33 0.29
SB_23760| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.38
SB_23422| Best HMM Match : Propeptide_C1 (HMM E-Value=7.2) 31 0.89
SB_54337| Best HMM Match : Ank (HMM E-Value=0.0052) 31 0.89
SB_58300| Best HMM Match : AAA_5 (HMM E-Value=0) 30 1.5
SB_26897| Best HMM Match : AAA (HMM E-Value=4.2e-12) 30 2.0
SB_9755| Best HMM Match : Sushi (HMM E-Value=0) 29 2.7
SB_47951| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.7
SB_34154| Best HMM Match : UvrD-helicase (HMM E-Value=0.064) 29 2.7
SB_9147| Best HMM Match : Sushi (HMM E-Value=0) 29 2.7
SB_27772| Best HMM Match : Ank (HMM E-Value=0.98) 29 3.6
SB_21549| Best HMM Match : SNF (HMM E-Value=2.3e-18) 29 3.6
SB_5823| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.6
SB_43681| Best HMM Match : MAM (HMM E-Value=2.5e-20) 29 4.7
SB_25516| Best HMM Match : AAA_2 (HMM E-Value=0) 29 4.7
SB_21493| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.7
SB_1024| Best HMM Match : Ank (HMM E-Value=0) 29 4.7
SB_43853| Best HMM Match : AAA_5 (HMM E-Value=0) 29 4.7
SB_379| Best HMM Match : ADK (HMM E-Value=3.2e-05) 29 4.7
SB_25750| Best HMM Match : AFG1_ATPase (HMM E-Value=5.6e-12) 28 6.2
SB_13109| Best HMM Match : Dynein_heavy (HMM E-Value=2.6e-09) 28 6.2
SB_56561| Best HMM Match : Hom_end_hint (HMM E-Value=4.1) 28 8.3
SB_35394| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.3
SB_4649| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.3
SB_18929| Best HMM Match : BRCT (HMM E-Value=1.4e-08) 28 8.3
SB_10418| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.3
>SB_5903| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 346
Score = 163 bits (397), Expect = 9e-41
Identities = 82/84 (97%), Positives = 82/84 (97%)
Frame = +1
Query: 256 MFIGDGAKLVRDAFALAKEKAPAIIFIDELDAIGTKRFDSEKAGDREVQRTMLELLNQLD 435
MFIGDGAKLVRDAFALAKEKAPAIIFIDELDAIGTKRFDSEKAGDREVQRTMLELLNQLD
Sbjct: 166 MFIGDGAKLVRDAFALAKEKAPAIIFIDELDAIGTKRFDSEKAGDREVQRTMLELLNQLD 225
Query: 436 GFSSTADIKVIAATNRVDILDPAL 507
GFSS DIKVIAATNRVDILDPAL
Sbjct: 226 GFSSHHDIKVIAATNRVDILDPAL 249
Score = 98.7 bits (235), Expect = 4e-21
Identities = 49/64 (76%), Positives = 54/64 (84%)
Frame = +3
Query: 498 PCPARSGRLDRKIEFPHPNEEARARIMQIHSRKMNVSPDVNFEELSRSTDDFQWAPSGKA 677
P RSGRLDRKIEFP+P++EARARI+QIHSRKMNVS DVNF+ELSR TDDF A KA
Sbjct: 247 PALLRSGRLDRKIEFPNPDQEARARILQIHSRKMNVSGDVNFDELSRCTDDFNGAML-KA 305
Query: 678 VCVE 689
VCVE
Sbjct: 306 VCVE 309
Score = 47.2 bits (107), Expect = 1e-05
Identities = 20/22 (90%), Positives = 22/22 (100%)
Frame = +2
Query: 11 VDERPTEQYSDIGGLDKQIQEL 76
VDERPTEQYSDIGGLD+QIQE+
Sbjct: 145 VDERPTEQYSDIGGLDQQIQEM 166
>SB_33442| Best HMM Match : AAA (HMM E-Value=0)
Length = 369
Score = 122 bits (293), Expect = 4e-28
Identities = 58/101 (57%), Positives = 73/101 (72%)
Frame = +1
Query: 259 FIGDGAKLVRDAFALAKEKAPAIIFIDELDAIGTKRFDSEKAGDREVQRTMLELLNQLDG 438
++G+G ++VRD F LAKE APAIIFIDE+DAI TKRFD++ DREVQR +LELLNQ+DG
Sbjct: 238 YLGEGPRMVRDVFRLAKENAPAIIFIDEIDAIATKRFDAQTGADREVQRILLELLNQMDG 297
Query: 439 FSSTADIKVIAATNRVDILDPALPDLDVWTEKSNFLIPMKK 561
F ++KVI ATNR D LDPAL K F +P ++
Sbjct: 298 FDQNVNVKVIMATNRQDTLDPALLRPGRLDRKIEFPLPDRR 338
Score = 97.5 bits (232), Expect = 9e-21
Identities = 42/81 (51%), Positives = 60/81 (74%)
Frame = +2
Query: 14 DERPTEQYSDIGGLDKQIQELIEAVVLPMTHKEKFVNLGIHPPKGVLLYGPPGTGKTLLA 193
+E+P Y++IGG+D Q QE+ EAV LP+TH E + +GI PP+GVLLYGPPG GKT+LA
Sbjct: 156 EEKPNVSYAEIGGMDIQKQEIREAVELPLTHFELYKQIGIDPPRGVLLYGPPGCGKTMLA 215
Query: 194 RACAAQTKSTFLKLAGPQLVR 256
+A A T + F+++ G + V+
Sbjct: 216 KAVAHHTTAAFIRVVGSEFVQ 236
Score = 43.6 bits (98), Expect = 2e-04
Identities = 20/44 (45%), Positives = 27/44 (61%)
Frame = +3
Query: 498 PCPARSGRLDRKIEFPHPNEEARARIMQIHSRKMNVSPDVNFEE 629
P R GRLDRKIEFP P+ + I + KMN+S +V+ E+
Sbjct: 318 PALLRPGRLDRKIEFPLPDRRQKRLIFSTITNKMNLSEEVDLED 361
>SB_33584| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 455
Score = 110 bits (265), Expect = 9e-25
Identities = 48/83 (57%), Positives = 66/83 (79%)
Frame = +2
Query: 8 RVDERPTEQYSDIGGLDKQIQELIEAVVLPMTHKEKFVNLGIHPPKGVLLYGPPGTGKTL 187
++++ P E Y+DIGGLD QIQE+ E+V LP+TH E + +GI PPKGV+LYG PGTGKTL
Sbjct: 370 KLEKAPQESYADIGGLDTQIQEIKESVELPLTHPELYEEMGIKPPKGVILYGQPGTGKTL 429
Query: 188 LARACAAQTKSTFLKLAGPQLVR 256
LA+A A QT +TFL++ G +L++
Sbjct: 430 LAKAVANQTSATFLRVVGSELIQ 452
>SB_9909| Best HMM Match : AAA (HMM E-Value=0)
Length = 400
Score = 108 bits (260), Expect = 4e-24
Identities = 49/83 (59%), Positives = 62/83 (74%)
Frame = +1
Query: 259 FIGDGAKLVRDAFALAKEKAPAIIFIDELDAIGTKRFDSEKAGDREVQRTMLELLNQLDG 438
++G+GA++VR+ F +A+ K I+F DE+DAIG RFD GD EVQRTMLEL+NQLDG
Sbjct: 158 YVGEGARMVRELFEMARTKKACIVFFDEIDAIGGARFDDGAGGDNEVQRTMLELINQLDG 217
Query: 439 FSSTADIKVIAATNRVDILDPAL 507
F +IKV+ ATNR D LDPAL
Sbjct: 218 FDPRGNIKVLMATNRPDTLDPAL 240
Score = 105 bits (253), Expect = 3e-23
Identities = 48/83 (57%), Positives = 63/83 (75%)
Frame = +2
Query: 8 RVDERPTEQYSDIGGLDKQIQELIEAVVLPMTHKEKFVNLGIHPPKGVLLYGPPGTGKTL 187
+V+E+P YSDIGG +QI +L E V P+ H E+FVNLGI PPKGVLL+GPPGTGKTL
Sbjct: 74 QVEEKPDVTYSDIGGCKEQIDKLREVVETPLLHPERFVNLGIEPPKGVLLFGPPGTGKTL 133
Query: 188 LARACAAQTKSTFLKLAGPQLVR 256
ARA A +T + F+++ G +LV+
Sbjct: 134 CARAVANRTDACFIRVIGSELVQ 156
>SB_3919| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 442
Score = 103 bits (248), Expect = 1e-22
Identities = 54/97 (55%), Positives = 69/97 (71%), Gaps = 14/97 (14%)
Frame = +1
Query: 259 FIGDGAKLVRDAFALAK--------------EKAPAIIFIDELDAIGTKRFDSEKAGDRE 396
FIG+GA++VR+ F +A+ E AP+IIF+DE+D+IG+ R + GD E
Sbjct: 251 FIGEGARMVRELFVMARHGENLQAMYFVDSREHAPSIIFMDEIDSIGSSRLEGGSGGDSE 310
Query: 397 VQRTMLELLNQLDGFSSTADIKVIAATNRVDILDPAL 507
VQRTMLELLNQLDGF +T +IKVI ATNR+DILD AL
Sbjct: 311 VQRTMLELLNQLDGFEATKNIKVIMATNRIDILDSAL 347
Score = 101 bits (242), Expect = 6e-22
Identities = 47/82 (57%), Positives = 61/82 (74%)
Frame = +2
Query: 11 VDERPTEQYSDIGGLDKQIQELIEAVVLPMTHKEKFVNLGIHPPKGVLLYGPPGTGKTLL 190
V++ P Y +GGLDKQI+E+ E + LP+ H E F LGI PKGVLLYGPPGTGKTLL
Sbjct: 168 VEKVPDSTYEMVGGLDKQIKEIKEVIELPVKHPELFEALGIDQPKGVLLYGPPGTGKTLL 227
Query: 191 ARACAAQTKSTFLKLAGPQLVR 256
ARA A T+ TF++++G +LV+
Sbjct: 228 ARAVAHHTECTFIRVSGSELVQ 249
Score = 36.3 bits (80), Expect = 0.024
Identities = 19/42 (45%), Positives = 28/42 (66%), Gaps = 3/42 (7%)
Frame = +3
Query: 510 RSGRLDRKIEFPHPNEE---ARARIMQIHSRKMNVSPDVNFE 626
R GR+DRKIEFP PNEE A + + R+++V+ + +FE
Sbjct: 349 RPGRIDRKIEFPPPNEEGVCTEAGMYALRERRVHVTQE-DFE 389
>SB_7424| Best HMM Match : AAA (HMM E-Value=0)
Length = 294
Score = 85.4 bits (202), Expect = 4e-17
Identities = 42/85 (49%), Positives = 59/85 (69%), Gaps = 1/85 (1%)
Frame = +1
Query: 256 MFIGDGAKLVRDAFALAKEKAPAIIFIDELDAIGTKR-FDSEKAGDREVQRTMLELLNQL 432
MF+G G VRD FA A++ AP IIFIDE+DA+G R + G E + T+ +LL ++
Sbjct: 120 MFVGVGPARVRDLFAQARKNAPCIIFIDEIDAVGRARGRGGQFGGHDERENTLNQLLVEM 179
Query: 433 DGFSSTADIKVIAATNRVDILDPAL 507
DGFSS+ ++ V++ TNR D+LDPAL
Sbjct: 180 DGFSSSTNVVVLSGTNRPDVLDPAL 204
Score = 57.2 bits (132), Expect = 1e-08
Identities = 28/83 (33%), Positives = 50/83 (60%)
Frame = +2
Query: 32 QYSDIGGLDKQIQELIEAVVLPMTHKEKFVNLGIHPPKGVLLYGPPGTGKTLLARACAAQ 211
++ D+ G ++ E++E V + + +++ LG PKG +L GPPGTGKTLLA+A A +
Sbjct: 46 EWIDVAGCEEAKLEIMEFVNF-LKNPQQYHELGAKIPKGAILSGPPGTGKTLLAKAVAGE 104
Query: 212 TKSTFLKLAGPQLVRCSLVMVPS 280
FL ++G + + + + P+
Sbjct: 105 AGVPFLSISGSEFLEMFVGVGPA 127
Score = 33.1 bits (72), Expect = 0.22
Identities = 16/47 (34%), Positives = 27/47 (57%)
Frame = +3
Query: 498 PCPARSGRLDRKIEFPHPNEEARARIMQIHSRKMNVSPDVNFEELSR 638
P R GR DR+I P P+ + R I ++H + + +V+ E+L+R
Sbjct: 202 PALLRPGRFDRQIHLPAPDIKGRCSIFKVHLKP--IKKNVDEEKLAR 246
>SB_45627| Best HMM Match : AAA (HMM E-Value=0)
Length = 628
Score = 84.6 bits (200), Expect = 7e-17
Identities = 39/81 (48%), Positives = 54/81 (66%)
Frame = +2
Query: 11 VDERPTEQYSDIGGLDKQIQELIEAVVLPMTHKEKFVNLGIHPPKGVLLYGPPGTGKTLL 190
V E P + DIGGL+ +EL E V P+ H +KF+ G+ P KGVL YGPPG GKTLL
Sbjct: 301 VVEVPNVSWDDIGGLEGVKRELQELVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLL 360
Query: 191 ARACAAQTKSTFLKLAGPQLV 253
A+A A + ++ F+ + GP+L+
Sbjct: 361 AKAIANECQANFISIKGPELL 381
Score = 66.9 bits (156), Expect = 1e-11
Identities = 31/84 (36%), Positives = 49/84 (58%)
Frame = +1
Query: 256 MFIGDGAKLVRDAFALAKEKAPAIIFIDELDAIGTKRFDSEKAGDREVQRTMLELLNQLD 435
M+ G+ VRD F A+ AP ++F DELD+I R + G R + ++L ++D
Sbjct: 383 MWFGESEANVRDVFDKARSAAPCVLFFDELDSIAKSRGGNVGDGGGAADRVINQVLTEMD 442
Query: 436 GFSSTADIKVIAATNRVDILDPAL 507
G + ++ +I ATNR DI+DPA+
Sbjct: 443 GMNVKKNVFIIGATNRPDIIDPAI 466
Score = 39.1 bits (87), Expect = 0.003
Identities = 15/46 (32%), Positives = 27/46 (58%)
Frame = +3
Query: 510 RSGRLDRKIEFPHPNEEARARIMQIHSRKMNVSPDVNFEELSRSTD 647
R GR DR+++ P+ R I++IH++ M + DV+ E++ D
Sbjct: 216 RFGRFDREVDIGIPDATGRLEILRIHTKNMKLGDDVDLEQIREKMD 261
Score = 30.7 bits (66), Expect = 1.2
Identities = 16/39 (41%), Positives = 26/39 (66%), Gaps = 1/39 (2%)
Frame = +1
Query: 394 EVQRTML-ELLNQLDGFSSTADIKVIAATNRVDILDPAL 507
EV+R ++ +LL +DG + + V+AATNR + +D AL
Sbjct: 176 EVERRIVSQLLTLMDGLKQRSHVIVMAATNRPNSVDVAL 214
>SB_14682| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 802
Score = 82.6 bits (195), Expect = 3e-16
Identities = 37/78 (47%), Positives = 52/78 (66%)
Frame = +2
Query: 17 ERPTEQYSDIGGLDKQIQELIEAVVLPMTHKEKFVNLGIHPPKGVLLYGPPGTGKTLLAR 196
E P +SD+GG + ++L EAV P+ H E F LGI PP+G+L+YGPPG KTL+AR
Sbjct: 530 EVPKVHWSDVGGNEMIKRKLKEAVEWPLKHPEAFQRLGIRPPRGILMYGPPGCSKTLIAR 589
Query: 197 ACAAQTKSTFLKLAGPQL 250
A A ++ F+ + GP+L
Sbjct: 590 ALATESGLNFIAIKGPEL 607
Score = 78.2 bits (184), Expect = 6e-15
Identities = 34/73 (46%), Positives = 50/73 (68%)
Frame = +2
Query: 35 YSDIGGLDKQIQELIEAVVLPMTHKEKFVNLGIHPPKGVLLYGPPGTGKTLLARACAAQT 214
+ IGGL QIQ + E + +P+T+ E F G+ PP+G+LLYGP GTGKT++ARA A +T
Sbjct: 255 FQSIGGLKTQIQAVREMIEMPLTNPELFTAYGVPPPRGILLYGPSGTGKTMIARAVANET 314
Query: 215 KSTFLKLAGPQLV 253
F + GP+++
Sbjct: 315 GVHFFCINGPEVL 327
Score = 69.3 bits (162), Expect = 3e-12
Identities = 35/83 (42%), Positives = 51/83 (61%)
Frame = +1
Query: 259 FIGDGAKLVRDAFALAKEKAPAIIFIDELDAIGTKRFDSEKAGDREVQRTMLELLNQLDG 438
++G+ K VR+ F A+ AP+I+F DELDAI +R + G R + +LL +LDG
Sbjct: 611 WVGESEKAVREVFLKARATAPSIVFFDELDAIAGQR--NSTGGSDVNDRVLTQLLTELDG 668
Query: 439 FSSTADIKVIAATNRVDILDPAL 507
+ D+ IAATNR D++D AL
Sbjct: 669 VETLKDVIFIAATNRPDMIDKAL 691
Score = 65.7 bits (153), Expect = 3e-11
Identities = 35/97 (36%), Positives = 56/97 (57%)
Frame = +1
Query: 217 VYIFEAGWSTTCAMFIGDGAKLVRDAFALAKEKAPAIIFIDELDAIGTKRFDSEKAGDRE 396
V+ F + + G+ +R+ F A+ K+P+I+FIDELDA+ +R + +R
Sbjct: 316 VHFFCINGPEVLSRYYGETEARLREIFTEAQNKSPSIVFIDELDALCPRRDKVQNEFERR 375
Query: 397 VQRTMLELLNQLDGFSSTADIKVIAATNRVDILDPAL 507
V T+L L++ + S+ + V+AATNR D LDPAL
Sbjct: 376 VVATLLTLMDGMHMKSTDTYVMVLAATNRPDALDPAL 412
Score = 34.7 bits (76), Expect = 0.072
Identities = 20/60 (33%), Positives = 30/60 (50%)
Frame = +3
Query: 510 RSGRLDRKIEFPHPNEEARARIMQIHSRKMNVSPDVNFEELSRSTDDFQWAPSGKAVCVE 689
R GR+DR I P P + R I++IH + ++ E+L T+ + A AVC E
Sbjct: 693 RPGRVDRLIYVPLPCWDTRRHILEIHLARTPCEGSLDLEDLVERTEGYSGAEIA-AVCRE 751
>SB_40956| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1086
Score = 75.8 bits (178), Expect = 3e-14
Identities = 35/77 (45%), Positives = 50/77 (64%)
Frame = +2
Query: 23 PTEQYSDIGGLDKQIQELIEAVVLPMTHKEKFVNLGIHPPKGVLLYGPPGTGKTLLARAC 202
P + D+GGLD +E+++ + LP+ H E F G+ GVLLYGPPGTGKTL+A+A
Sbjct: 807 PDISWKDVGGLDSVKEEILDTIQLPLLHPELFA-AGLRR-SGVLLYGPPGTGKTLMAKAV 864
Query: 203 AAQTKSTFLKLAGPQLV 253
A + FL + GP+L+
Sbjct: 865 ATECSLNFLSVKGPELI 881
Score = 74.9 bits (176), Expect = 5e-14
Identities = 37/84 (44%), Positives = 54/84 (64%)
Frame = +1
Query: 256 MFIGDGAKLVRDAFALAKEKAPAIIFIDELDAIGTKRFDSEKAGDREVQRTMLELLNQLD 435
M++G + VR+ F+ A+ +P +IF DELD++ R S +G + R + +LL +LD
Sbjct: 883 MYVGQSEQNVREVFSRAQAASPCVIFFDELDSLAPNRGRSGDSGG-VMDRVVAQLLAELD 941
Query: 436 GFSSTADIKVIAATNRVDILDPAL 507
G ST D+ VI ATNR D+LDPAL
Sbjct: 942 GLHSTCDVFVIGATNRPDLLDPAL 965
Score = 33.1 bits (72), Expect = 0.22
Identities = 16/41 (39%), Positives = 26/41 (63%)
Frame = +3
Query: 531 KIEFPHPNEEARARIMQIHSRKMNVSPDVNFEELSRSTDDF 653
+I+ P+E+ R ++Q S +++PDVNFE L+R T F
Sbjct: 684 EIKLESPSEQERLCMLQGISSVYSLAPDVNFEVLARRTAGF 724
Score = 27.9 bits (59), Expect = 8.3
Identities = 21/52 (40%), Positives = 27/52 (51%), Gaps = 1/52 (1%)
Frame = +2
Query: 59 KQIQELIEAVVLPMTHKEKFVNLGIHPP-KGVLLYGPPGTGKTLLARACAAQ 211
K QE +E ++ P K VN PP VLL G PGTGK + A ++Q
Sbjct: 520 KTSQEKLEKIIRPYLSKR--VN---GPPFVQVLLTGLPGTGKRAICMAVSSQ 566
>SB_37200| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 908
Score = 75.4 bits (177), Expect = 4e-14
Identities = 36/77 (46%), Positives = 50/77 (64%)
Frame = +2
Query: 20 RPTEQYSDIGGLDKQIQELIEAVVLPMTHKEKFVNLGIHPPKGVLLYGPPGTGKTLLARA 199
+PT ++ D+GGL+ Q L +A+ P+ H E F +G+ P+GVLLYGPPG KT L RA
Sbjct: 479 QPT-RWDDVGGLEGVKQALRQAIEWPLLHPEAFARMGLRRPRGVLLYGPPGCCKTTLVRA 537
Query: 200 CAAQTKSTFLKLAGPQL 250
A+ T TF+ L+ QL
Sbjct: 538 AASSTHCTFMSLSCAQL 554
Score = 56.4 bits (130), Expect = 2e-08
Identities = 31/68 (45%), Positives = 40/68 (58%)
Frame = +1
Query: 304 AKEKAPAIIFIDELDAIGTKRFDSEKAGDREVQRTMLELLNQLDGFSSTADIKVIAATNR 483
A P ++FIDELDA+ KR S G+ E R + +LL +DG S + VI ATNR
Sbjct: 303 ASRFGPCVLFIDELDALCPKRGSS---GNEEENRIVAQLLTLMDGLESRGRVIVIGATNR 359
Query: 484 VDILDPAL 507
+ LDPAL
Sbjct: 360 PNALDPAL 367
Score = 55.6 bits (128), Expect = 4e-08
Identities = 26/49 (53%), Positives = 33/49 (67%)
Frame = +2
Query: 44 IGGLDKQIQELIEAVVLPMTHKEKFVNLGIHPPKGVLLYGPPGTGKTLL 190
+ GLD I+ L E V P+ + E F +LGI+ PKG+LL G PG GKTLL
Sbjct: 213 LSGLDDSIKMLKELVQFPLYYPESFSHLGINGPKGILLVGAPGVGKTLL 261
Score = 39.1 bits (87), Expect = 0.003
Identities = 17/51 (33%), Positives = 31/51 (60%)
Frame = +3
Query: 510 RSGRLDRKIEFPHPNEEARARIMQIHSRKMNVSPDVNFEELSRSTDDFQWA 662
R GR+D I P P+ +AR I+++H+R ++PDV+ ++ T+ + A
Sbjct: 717 RPGRIDCMIYVPPPDMKARLEILRVHTRFSPLAPDVDLSVIAEGTELYSGA 767
Score = 33.1 bits (72), Expect = 0.22
Identities = 20/67 (29%), Positives = 36/67 (53%)
Frame = +1
Query: 259 FIGDGAKLVRDAFALAKEKAPAIIFIDELDAIGTKRFDSEKAGDREVQRTMLELLNQLDG 438
++GD + +R+ + P ++F+DELD++ KR G R + LLN++DG
Sbjct: 558 YVGDAERTLRELVL----QLPLLLFLDELDSLAGKR--GNNLGME--TRLLATLLNEMDG 609
Query: 439 FSSTADI 459
+A+I
Sbjct: 610 VGVSANI 616
>SB_19460| Best HMM Match : AAA (HMM E-Value=0)
Length = 340
Score = 75.4 bits (177), Expect = 4e-14
Identities = 36/77 (46%), Positives = 50/77 (64%)
Frame = +2
Query: 20 RPTEQYSDIGGLDKQIQELIEAVVLPMTHKEKFVNLGIHPPKGVLLYGPPGTGKTLLARA 199
+PT ++ D+GGL+ Q L +A+ P+ H E F +G+ P+GVLLYGPPG KT L RA
Sbjct: 8 QPT-RWDDVGGLEGVKQALRQAIEWPLLHPEAFARMGLRRPRGVLLYGPPGCCKTTLVRA 66
Query: 200 CAAQTKSTFLKLAGPQL 250
A+ T TF+ L+ QL
Sbjct: 67 AASSTHCTFMSLSCAQL 83
Score = 48.0 bits (109), Expect = 7e-06
Identities = 25/67 (37%), Positives = 40/67 (59%)
Frame = +1
Query: 259 FIGDGAKLVRDAFALAKEKAPAIIFIDELDAIGTKRFDSEKAGDREVQRTMLELLNQLDG 438
++GD + +R+ F A+ APAI+F+DELD++ KR G R + LLN++DG
Sbjct: 87 YVGDAERTLRELFLKARATAPAILFLDELDSLAGKR--GNNLGME--TRLLATLLNEMDG 142
Query: 439 FSSTADI 459
+A+I
Sbjct: 143 VGVSANI 149
Score = 39.1 bits (87), Expect = 0.003
Identities = 17/51 (33%), Positives = 31/51 (60%)
Frame = +3
Query: 510 RSGRLDRKIEFPHPNEEARARIMQIHSRKMNVSPDVNFEELSRSTDDFQWA 662
R GR+D I P P+ +AR I+++H+R ++PDV+ ++ T+ + A
Sbjct: 250 RPGRIDCMIYVPPPDMKARLEILRVHTRFSPLAPDVDLSVIAEGTELYSGA 300
>SB_3115| Best HMM Match : AAA (HMM E-Value=0)
Length = 913
Score = 74.9 bits (176), Expect = 5e-14
Identities = 38/85 (44%), Positives = 55/85 (64%), Gaps = 1/85 (1%)
Frame = +1
Query: 256 MFIGDGAKLVRDAFALAKEKAPAIIFIDELDAIGTKRFDSEK-AGDREVQRTMLELLNQL 432
MF G G+ VRD F A++ AP I++IDE+DAIG R S G E + T+ +LL ++
Sbjct: 197 MFAGVGSARVRDLFTRARKLAPCIVYIDEVDAIGRSRKSSRSMGGHNEQENTLNQLLVEM 256
Query: 433 DGFSSTADIKVIAATNRVDILDPAL 507
DG ++ + ++A+TNR DILD AL
Sbjct: 257 DGMNTLDGVIMLASTNRADILDNAL 281
Score = 61.3 bits (142), Expect = 7e-10
Identities = 30/79 (37%), Positives = 46/79 (58%)
Frame = +2
Query: 17 ERPTEQYSDIGGLDKQIQELIEAVVLPMTHKEKFVNLGIHPPKGVLLYGPPGTGKTLLAR 196
++ + ++ D+ G+ + E++E V + ++ LG PKG LL GPPGTGKTLLA+
Sbjct: 118 DKGSARFKDVAGMQEAKMEVMEFVDY-LKSAGRYTQLGAKIPKGALLVGPPGTGKTLLAK 176
Query: 197 ACAAQTKSTFLKLAGPQLV 253
A A + FL +AG V
Sbjct: 177 AVATEADVPFLSMAGSDFV 195
>SB_48561| Best HMM Match : AAA (HMM E-Value=0)
Length = 2021
Score = 71.7 bits (168), Expect = 5e-13
Identities = 31/58 (53%), Positives = 42/58 (72%)
Frame = +2
Query: 32 QYSDIGGLDKQIQELIEAVVLPMTHKEKFVNLGIHPPKGVLLYGPPGTGKTLLARACA 205
++ +GGL+KQIQ L E ++ P+ + E F I PP+GVL +GPPGTGKTL+ARA A
Sbjct: 882 KFDSVGGLNKQIQALKEMILFPLVYPEVFDKFKITPPRGVLFFGPPGTGKTLVARALA 939
Score = 59.7 bits (138), Expect = 2e-09
Identities = 35/123 (28%), Positives = 59/123 (47%)
Frame = +1
Query: 184 IAGESLRCSNKVYIFEAGWSTTCAMFIGDGAKLVRDAFALAKEKAPAIIFIDELDAIGTK 363
+A E + KV F + + ++G+ + +R F A P+IIF DE+D +
Sbjct: 938 LANECSQGDKKVSFFMRKGADCLSKWVGESERQLRLLFDQAYAMRPSIIFFDEIDGLAPV 997
Query: 364 RFDSEKAGDREVQRTMLELLNQLDGFSSTADIKVIAATNRVDILDPALPDLDVWTEKSNF 543
R + + T+L L +DG S ++ +I ATNR+D +DPAL + + F
Sbjct: 998 RSSRQDQIHSSIVSTLLAL---MDGLDSRGEVVIIGATNRIDAIDPALRRPGRFDREFQF 1054
Query: 544 LIP 552
+P
Sbjct: 1055 ALP 1057
Score = 34.7 bits (76), Expect = 0.072
Identities = 14/33 (42%), Positives = 21/33 (63%)
Frame = +3
Query: 498 PCPARSGRLDRKIEFPHPNEEARARIMQIHSRK 596
P R GR DR+ +F P+ +AR I+ IH+R+
Sbjct: 1040 PALRRPGRFDREFQFALPDRDARRSILSIHTRE 1072
>SB_49367| Best HMM Match : AAA (HMM E-Value=0)
Length = 976
Score = 69.3 bits (162), Expect = 3e-12
Identities = 32/74 (43%), Positives = 48/74 (64%)
Frame = +2
Query: 32 QYSDIGGLDKQIQELIEAVVLPMTHKEKFVNLGIHPPKGVLLYGPPGTGKTLLARACAAQ 211
+++DIGG +++ + +++ M H E F LG+ P G LL+GPPG GKTLLA A A +
Sbjct: 675 KFADIGGCSNTLEQ-VGKLLVHMCHPEVFTTLGVTPTTGFLLHGPPGCGKTLLAHAIAGE 733
Query: 212 TKSTFLKLAGPQLV 253
+ FLKLA ++V
Sbjct: 734 LEMPFLKLAATEIV 747
Score = 62.9 bits (146), Expect = 2e-10
Identities = 33/81 (40%), Positives = 50/81 (61%)
Frame = +1
Query: 265 GDGAKLVRDAFALAKEKAPAIIFIDELDAIGTKRFDSEKAGDREVQRTMLELLNQLDGFS 444
G+ + VR+ F A +AP I+F+DE+DAI KR ++ K +R + +L ++ L+ +
Sbjct: 752 GESEEKVRELFTSAVAQAPCILFLDEIDAITPKRENASKDMERRIVSQLLSCMDDLNN-N 810
Query: 445 STADIKVIAATNRVDILDPAL 507
A + VI ATNR D LDPAL
Sbjct: 811 PDAHVLVIGATNRPDSLDPAL 831
Score = 31.1 bits (67), Expect = 0.89
Identities = 14/27 (51%), Positives = 18/27 (66%)
Frame = +3
Query: 498 PCPARSGRLDRKIEFPHPNEEARARIM 578
P R+GR DR+I P+E ARARI+
Sbjct: 829 PALRRAGRFDREISMGIPDESARARIV 855
>SB_35973| Best HMM Match : zf-CCHC (HMM E-Value=0.0026)
Length = 779
Score = 66.1 bits (154), Expect = 3e-11
Identities = 28/46 (60%), Positives = 36/46 (78%)
Frame = +2
Query: 35 YSDIGGLDKQIQELIEAVVLPMTHKEKFVNLGIHPPKGVLLYGPPG 172
YSD+GGL +QI+EL E + LP+T+ E F +GI PPKG LL+GPPG
Sbjct: 134 YSDVGGLSEQIRELREVIELPLTNPELFQRVGIAPPKGCLLFGPPG 179
>SB_55690| Best HMM Match : AAA (HMM E-Value=0)
Length = 1031
Score = 62.9 bits (146), Expect = 2e-10
Identities = 34/84 (40%), Positives = 48/84 (57%), Gaps = 1/84 (1%)
Frame = +1
Query: 259 FIGDGAKLVRDAFALAKEKAPAIIFIDELDAIGTKR-FDSEKAGDREVQRTMLELLNQLD 435
+IG + VRD F A+ P I+F DE D++ +R DS DR V +LL QLD
Sbjct: 741 YIGASEQAVRDMFTRAQSAKPCILFFDEFDSLAPRRGHDSTGVTDRVVN----QLLTQLD 796
Query: 436 GFSSTADIKVIAATNRVDILDPAL 507
G + ++AAT+R D++DPAL
Sbjct: 797 GVEGLKGVYILAATSRPDLIDPAL 820
Score = 52.8 bits (121), Expect = 3e-07
Identities = 27/73 (36%), Positives = 39/73 (53%)
Frame = +2
Query: 35 YSDIGGLDKQIQELIEAVVLPMTHKEKFVNLGIHPPKGVLLYGPPGTGKTLLARACAAQT 214
+ ++GGL L E ++ P F + G+LLYGPPGTGKTLLA A +
Sbjct: 666 WENVGGLGPVKGVLQETLLWPSKFAGLFAKCPLRLRGGLLLYGPPGTGKTLLAGVVAKEC 725
Query: 215 KSTFLKLAGPQLV 253
F+ + GP+L+
Sbjct: 726 GLNFISIKGPELL 738
>SB_33907| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 56
Score = 59.7 bits (138), Expect = 2e-09
Identities = 26/53 (49%), Positives = 37/53 (69%)
Frame = +2
Query: 95 PMTHKEKFVNLGIHPPKGVLLYGPPGTGKTLLARACAAQTKSTFLKLAGPQLV 253
P+ H E+F LG+ P G+LL GPPG GKTLLA+A A ++ F+ + GP+L+
Sbjct: 2 PVQHPEEFSALGLTHPPGILLAGPPGCGKTLLAKAIANESGINFISVKGPELL 54
>SB_56202| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 518
Score = 59.7 bits (138), Expect = 2e-09
Identities = 31/80 (38%), Positives = 48/80 (60%)
Frame = +2
Query: 11 VDERPTEQYSDIGGLDKQIQELIEAVVLPMTHKEKFVNLGIHPPKGVLLYGPPGTGKTLL 190
+ + P ++DI L + + L EAVVLP+ + F + P +GVL+ GPPGTGKT+L
Sbjct: 241 LQKNPNVHWADIADLHEAKKLLEEAVVLPLLMPDYFQGIR-RPWRGVLMVGPPGTGKTML 299
Query: 191 ARACAAQTKSTFLKLAGPQL 250
A+A A + +TF ++ L
Sbjct: 300 AKAVATECGTTFFNVSSSTL 319
Score = 57.6 bits (133), Expect = 9e-09
Identities = 40/101 (39%), Positives = 57/101 (56%), Gaps = 7/101 (6%)
Frame = +1
Query: 226 FEAGWSTTCAMFIGDGAKLVRDAFALAKEKAPAIIFIDELDAIGTKR-FDSEKAGDREVQ 402
F ST + + G+ KLVR F +A+ AP+ IF+DE+D+I ++R DSE R V+
Sbjct: 312 FNVSSSTLTSKYRGESEKLVRILFEMARFYAPSTIFVDEIDSICSRRGSDSEHEASRRVK 371
Query: 403 RTMLELLNQLDGFSSTAD------IKVIAATNRVDILDPAL 507
ELL Q+DG ++D + V+AATN LD AL
Sbjct: 372 S---ELLVQMDGVGGSSDDGETKQVMVLAATNFPWDLDEAL 409
>SB_17703| Best HMM Match : Mito_carr (HMM E-Value=0)
Length = 611
Score = 59.7 bits (138), Expect = 2e-09
Identities = 26/53 (49%), Positives = 37/53 (69%)
Frame = +2
Query: 95 PMTHKEKFVNLGIHPPKGVLLYGPPGTGKTLLARACAAQTKSTFLKLAGPQLV 253
P+ H E+F LG+ P G+LL GPPG GKTLLA+A A ++ F+ + GP+L+
Sbjct: 2 PVQHPEEFSALGLTHPPGILLAGPPGCGKTLLAKAIANESGINFISVKGPELL 54
Score = 59.3 bits (137), Expect = 3e-09
Identities = 32/97 (32%), Positives = 52/97 (53%)
Frame = +1
Query: 256 MFIGDGAKLVRDAFALAKEKAPAIIFIDELDAIGTKRFDSEKAGDREVQRTMLELLNQLD 435
M++G+ + VR F A+ AP +IF DELD++ +R S ++G R + +LL ++D
Sbjct: 56 MYVGESERAVRQVFQRARNSAPCVIFFDELDSLCPRRSGSSESGSS--VRVVNQLLTEMD 113
Query: 436 GFSSTADIKVIAATNRVDILDPALPDLDVWTEKSNFL 546
G + + ++ ATN+ I D D D T S L
Sbjct: 114 GLQARKHVFIMGATNKPGIRDGPF-DCDKLTNSSKGL 149
>SB_30385| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 131
Score = 55.6 bits (128), Expect = 4e-08
Identities = 26/49 (53%), Positives = 33/49 (67%)
Frame = +2
Query: 44 IGGLDKQIQELIEAVVLPMTHKEKFVNLGIHPPKGVLLYGPPGTGKTLL 190
+ GLD I+ L E V P+ + E F +LGI+ PKG+LL G PG GKTLL
Sbjct: 43 LSGLDDSIKMLKELVQFPLYYPESFSHLGINGPKGILLVGAPGVGKTLL 91
>SB_3478| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 62
Score = 54.8 bits (126), Expect = 6e-08
Identities = 23/48 (47%), Positives = 33/48 (68%)
Frame = +3
Query: 519 RLDRKIEFPHPNEEARARIMQIHSRKMNVSPDVNFEELSRSTDDFQWA 662
R+DRKIEFP P+E+ + RI IH+++M ++ DVN EE + DD A
Sbjct: 2 RIDRKIEFPMPDEKTKRRIFNIHTQRMTLAEDVNLEEFIMAKDDLSGA 49
>SB_35704| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 256
Score = 54.4 bits (125), Expect = 8e-08
Identities = 31/78 (39%), Positives = 44/78 (56%)
Frame = +2
Query: 14 DERPTEQYSDIGGLDKQIQELIEAVVLPMTHKEKFVNLGIHPPKGVLLYGPPGTGKTLLA 193
DE ++Y + +++QE++E + P EKF LG P GVLL G PGTGKTLLA
Sbjct: 126 DESVRKEYLKVDEAKEELQEVVEFLRNP----EKFKRLGGKLPTGVLLIGSPGTGKTLLA 181
Query: 194 RACAAQTKSTFLKLAGPQ 247
+A A + F +G +
Sbjct: 182 KAVAGEAGVPFFFCSGSE 199
Score = 52.4 bits (120), Expect = 3e-07
Identities = 24/37 (64%), Positives = 28/37 (75%)
Frame = +1
Query: 256 MFIGDGAKLVRDAFALAKEKAPAIIFIDELDAIGTKR 366
MF+G GA VR+ FA AKE AP I+F+DELDAIG R
Sbjct: 203 MFVGVGAARVRNLFAAAKEHAPCIVFVDELDAIGGSR 239
>SB_28977| Best HMM Match : AAA (HMM E-Value=0)
Length = 442
Score = 52.0 bits (119), Expect = 4e-07
Identities = 31/90 (34%), Positives = 50/90 (55%), Gaps = 1/90 (1%)
Frame = +1
Query: 241 STTCAMFIGDGAKLVRDAFALAKEKAPAIIFIDELDAIGTKRFDSEKAGDREVQRTMLEL 420
S + ++G+ +LV+ F LA+E P+IIFIDE+D++ R ++E R ++ E
Sbjct: 200 SDLVSKWLGESERLVKQLFELARENKPSIIFIDEVDSLCGSRSENESESARRIK---TEF 256
Query: 421 LNQLDGFSSTAD-IKVIAATNRVDILDPAL 507
L Q+ G D + V+ ATN LD A+
Sbjct: 257 LVQMQGVGVDNDQVLVLGATNIPWTLDSAI 286
Score = 39.5 bits (88), Expect = 0.003
Identities = 21/51 (41%), Positives = 30/51 (58%)
Frame = +2
Query: 11 VDERPTEQYSDIGGLDKQIQELIEAVVLPMTHKEKFVNLGIHPPKGVLLYG 163
V E+P ++SDI GL+ + L EAV+LP+ F P +G+LLYG
Sbjct: 88 VMEKPNVKWSDIAGLESAKEALKEAVILPIKFPHLFTGKRT-PWRGILLYG 137
>SB_11032| Best HMM Match : AAA (HMM E-Value=3.5)
Length = 111
Score = 50.0 bits (114), Expect = 2e-06
Identities = 23/57 (40%), Positives = 37/57 (64%)
Frame = +1
Query: 262 IGDGAKLVRDAFALAKEKAPAIIFIDELDAIGTKRFDSEKAGDREVQRTMLELLNQL 432
+G+G K+VR FA+A+ PA+IF+DE+D++ T+R D E R ++ L L +L
Sbjct: 1 VGEGEKMVRAMFAVARCYLPAVIFMDEIDSLLTQRTDGEHEASRRIKTEFLVQLVEL 57
>SB_732| Best HMM Match : AAA (HMM E-Value=0)
Length = 388
Score = 43.6 bits (98), Expect = 2e-04
Identities = 27/91 (29%), Positives = 44/91 (48%), Gaps = 8/91 (8%)
Frame = +1
Query: 259 FIGDGAKLVRDAFALAKEK--------APAIIFIDELDAIGTKRFDSEKAGDREVQRTML 414
F+G+ +R FA A+E+ A +I DE DA+ R+ G +
Sbjct: 223 FVGESEANIRKLFAEAEEEQKRFGDNSALHLIIFDEFDAVCKSRYSYNTGGTGVQDSVVN 282
Query: 415 ELLNQLDGFSSTADIKVIAATNRVDILDPAL 507
+LL ++DG ++ +I TNR D++D AL
Sbjct: 283 QLLAKIDGVEQLNNVLLIGMTNRRDLIDDAL 313
Score = 43.2 bits (97), Expect = 2e-04
Identities = 19/44 (43%), Positives = 30/44 (68%), Gaps = 1/44 (2%)
Frame = +2
Query: 125 LGIHPPKGVLLYGPPGTGKTLLARACAAQTKSTFLK-LAGPQLV 253
+G+ KG+LL+GPPGTGKTL+AR + K ++GP+++
Sbjct: 177 MGLKHVKGILLFGPPGTGKTLMARQIGTMLNTREPKIISGPEVL 220
Score = 40.3 bits (90), Expect = 0.001
Identities = 21/55 (38%), Positives = 34/55 (61%), Gaps = 4/55 (7%)
Frame = +3
Query: 510 RSGRLDRKIEFPHPNEEARARIMQIHSRKMN----VSPDVNFEELSRSTDDFQWA 662
R GRL+ ++E P+EE R +I++IH+ KM ++ DV+ EL+ T +F A
Sbjct: 315 RPGRLEVQVEIGLPDEEGRVQILKIHTAKMRENKVLADDVDLAELATQTKNFTGA 369
>SB_31892| Best HMM Match : AAA (HMM E-Value=6.2e-25)
Length = 420
Score = 39.1 bits (87), Expect = 0.003
Identities = 31/92 (33%), Positives = 46/92 (50%), Gaps = 6/92 (6%)
Frame = +1
Query: 250 CAMFIGDGAKLVRDAFALAKEKAP--AIIFIDELDAIGTKRFDSEKA----GDREVQRTM 411
C M + D + L D AP +II ++++DA KR ++ A G + + T
Sbjct: 251 CVMNLSDRS-LTDDRLNHLMSVAPQQSIILLEDIDAAFVKRDETNAANKGGGMYQNRVTF 309
Query: 412 LELLNQLDGFSSTADIKVIAATNRVDILDPAL 507
LLN LDG +S+ + V TN + LDPAL
Sbjct: 310 SGLLNTLDGVASSEERVVFMTTNHLKRLDPAL 341
Score = 34.3 bits (75), Expect = 0.095
Identities = 21/54 (38%), Positives = 30/54 (55%), Gaps = 1/54 (1%)
Frame = +2
Query: 53 LDKQIQELIEAVVLPMTHKEK-FVNLGIHPPKGVLLYGPPGTGKTLLARACAAQ 211
LD+ I E I A V + +++ GI +G LLYGPPG GK+ +A A +
Sbjct: 192 LDEGIAEGILADVKEFIGSPRWYMDRGIPYRRGYLLYGPPGCGKSSFIQALAGE 245
>SB_46732| Best HMM Match : AAA (HMM E-Value=0.044)
Length = 430
Score = 37.5 bits (83), Expect = 0.010
Identities = 18/67 (26%), Positives = 39/67 (58%)
Frame = +2
Query: 53 LDKQIQELIEAVVLPMTHKEKFVNLGIHPPKGVLLYGPPGTGKTLLARACAAQTKSTFLK 232
L ++E + ++ + ++ ++ N G++ + +L YGPPGTGKT+ A++ A + +
Sbjct: 304 LKPNLEEHLSSISIATSNTKR--NKGMY--RNLLFYGPPGTGKTMFAKSLARHSGMDYAV 359
Query: 233 LAGPQLV 253
+ G +V
Sbjct: 360 MTGGDVV 366
>SB_34296| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 3464
Score = 33.5 bits (73), Expect = 0.17
Identities = 23/67 (34%), Positives = 34/67 (50%)
Frame = +1
Query: 298 ALAKEKAPAIIFIDELDAIGTKRFDSEKAGDREVQRTMLELLNQLDGFSSTADIKVIAAT 477
A A+E+ P++I + DA + R DSE GDR L L L+ T++IK +
Sbjct: 2674 APARERDPSVIDVYSSDARDSSRADSETDGDRLKD---LPLAVDLNDSKDTSEIKTQSQV 2730
Query: 478 NRVDILD 498
+DI D
Sbjct: 2731 KDLDISD 2737
>SB_27238| Best HMM Match : DUF433 (HMM E-Value=8.2)
Length = 368
Score = 32.7 bits (71), Expect = 0.29
Identities = 23/61 (37%), Positives = 38/61 (62%), Gaps = 2/61 (3%)
Frame = +2
Query: 110 EKFVNLGIHPPKGVLLYGPPG-TGKTLLARACAAQTKSTFLKLAGPQLVRCSLVM-VPSL 283
+K+++ G+ KG+L P G T + + A + +AQT+ T K PQ++R S+ M VP+L
Sbjct: 232 KKWLDQGVE--KGILEPLPDGGTHQLMFAISRSAQTEETDKKKLEPQMIRASIDMRVPNL 289
Query: 284 S 286
S
Sbjct: 290 S 290
>SB_23760| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 632
Score = 32.3 bits (70), Expect = 0.38
Identities = 27/103 (26%), Positives = 51/103 (49%)
Frame = -2
Query: 530 SVQTSRSGRAGSKMSTLLVAAMTLMSAVELNPSSWFNNSNIVRCTSRSPAFSESKRFVPI 351
S ++ S A S +++ +A+ S+ + + +S +SNI S S A S +
Sbjct: 2 SSSSTLSASASSNIASSDIASSANASSAKTSSAS--ASSNIASSASASSASMSSSSSLSA 59
Query: 350 ASSSSMKMIAGAFSLANAKASRTSLAPSPMNIAQVVDQPASKM 222
++SS++ + S ANA +++TS A + NIA ++ M
Sbjct: 60 SASSNIAS-SDIASSANASSAKTSSASASSNIASSASASSASM 101
Score = 31.9 bits (69), Expect = 0.51
Identities = 27/93 (29%), Positives = 48/93 (51%)
Frame = -2
Query: 530 SVQTSRSGRAGSKMSTLLVAAMTLMSAVELNPSSWFNNSNIVRCTSRSPAFSESKRFVPI 351
S +S S A S +++ +A+ S+ + + +S +SNI S S A S +
Sbjct: 52 SSSSSLSASASSNIASSDIASSANASSAKTSSAS--ASSNIASSASASSASMSSASSLSA 109
Query: 350 ASSSSMKMIAGAFSLANAKASRTSLAPSPMNIA 252
++SS++ + S ANA +++TS A + NIA
Sbjct: 110 SASSNIAS-SDIASSANASSAKTSSASASSNIA 141
>SB_23422| Best HMM Match : Propeptide_C1 (HMM E-Value=7.2)
Length = 628
Score = 31.1 bits (67), Expect = 0.89
Identities = 14/30 (46%), Positives = 16/30 (53%)
Frame = +2
Query: 140 PKGVLLYGPPGTGKTLLARACAAQTKSTFL 229
P LL+GPPGTGKT+ Q FL
Sbjct: 591 PTPYLLFGPPGTGKTVTLVEAMLQVHRNFL 620
>SB_54337| Best HMM Match : Ank (HMM E-Value=0.0052)
Length = 511
Score = 31.1 bits (67), Expect = 0.89
Identities = 12/26 (46%), Positives = 18/26 (69%)
Frame = +2
Query: 107 KEKFVNLGIHPPKGVLLYGPPGTGKT 184
+ + +NL +PP+ V+L G GTGKT
Sbjct: 414 EHRIINLRPNPPRSVILLGRSGTGKT 439
>SB_58300| Best HMM Match : AAA_5 (HMM E-Value=0)
Length = 1736
Score = 30.3 bits (65), Expect = 1.5
Identities = 21/66 (31%), Positives = 31/66 (46%)
Frame = +2
Query: 152 LLYGPPGTGKTLLARACAAQTKSTFLKLAGPQLVRCSLVMVPSLSATPLHWLKRRHQQSS 331
LL GP G GK +L R C Q +ST + +V C S ++P H L++ Q
Sbjct: 690 LLVGPEGCGKEMLLRHCFEQLRSTQV-----AIVHC------SAQSSPAHVLQKLQQMCM 738
Query: 332 SLMNWT 349
+ +T
Sbjct: 739 VISTYT 744
>SB_26897| Best HMM Match : AAA (HMM E-Value=4.2e-12)
Length = 230
Score = 29.9 bits (64), Expect = 2.0
Identities = 13/21 (61%), Positives = 14/21 (66%)
Frame = +2
Query: 149 VLLYGPPGTGKTLLARACAAQ 211
+L YGPPGTGKT A A Q
Sbjct: 13 LLFYGPPGTGKTSTILAVAKQ 33
>SB_9755| Best HMM Match : Sushi (HMM E-Value=0)
Length = 1351
Score = 29.5 bits (63), Expect = 2.7
Identities = 24/74 (32%), Positives = 36/74 (48%), Gaps = 2/74 (2%)
Frame = -1
Query: 549 DEEIRFFGPNVQIWQGRVQNVHSIGSCNDLDVSS*AKPIKLV*QLQHSTLHLTVSSLF*I 370
DE FG V+ R ++ SCN + +S + I V L ST+ + S LF
Sbjct: 866 DEGFDLFGSPVRSCTSRGAWSGTVTSCNGMSLSLVSNSILFVNYLVLSTIFVGNSVLFVD 925
Query: 369 KTL--CTNSVQFIN 334
++ +NSVQF+N
Sbjct: 926 DSVISVSNSVQFVN 939
>SB_47951| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 437
Score = 29.5 bits (63), Expect = 2.7
Identities = 12/31 (38%), Positives = 20/31 (64%)
Frame = +2
Query: 92 LPMTHKEKFVNLGIHPPKGVLLYGPPGTGKT 184
L ++ +E V + P+ +++GPPGTGKT
Sbjct: 235 LDLSQREA-VGFALRQPEVAVIHGPPGTGKT 264
>SB_34154| Best HMM Match : UvrD-helicase (HMM E-Value=0.064)
Length = 1064
Score = 29.5 bits (63), Expect = 2.7
Identities = 11/20 (55%), Positives = 14/20 (70%)
Frame = +2
Query: 128 GIHPPKGVLLYGPPGTGKTL 187
G P L++GPPGTGKT+
Sbjct: 547 GTSRPHPYLIFGPPGTGKTI 566
>SB_9147| Best HMM Match : Sushi (HMM E-Value=0)
Length = 1656
Score = 29.5 bits (63), Expect = 2.7
Identities = 24/74 (32%), Positives = 36/74 (48%), Gaps = 2/74 (2%)
Frame = -1
Query: 549 DEEIRFFGPNVQIWQGRVQNVHSIGSCNDLDVSS*AKPIKLV*QLQHSTLHLTVSSLF*I 370
DE FG V+ R ++ SCN + +S + I V L ST+ + S LF
Sbjct: 413 DEGFDLFGSPVRSCTSRGAWSGTVTSCNGMSLSLVSNSILFVNYLVLSTIFVGNSVLFVD 472
Query: 369 KTL--CTNSVQFIN 334
++ +NSVQF+N
Sbjct: 473 DSVISVSNSVQFVN 486
>SB_27772| Best HMM Match : Ank (HMM E-Value=0.98)
Length = 340
Score = 29.1 bits (62), Expect = 3.6
Identities = 14/45 (31%), Positives = 24/45 (53%)
Frame = +1
Query: 328 IFIDELDAIGTKRFDSEKAGDREVQRTMLELLNQLDGFSSTADIK 462
IF+DE IG F++ + G ++ +TML ++ G D+K
Sbjct: 73 IFLDEQARIGGALFNAVRKGSKDCVQTMLPYISSKRGDIGPEDVK 117
>SB_21549| Best HMM Match : SNF (HMM E-Value=2.3e-18)
Length = 515
Score = 29.1 bits (62), Expect = 3.6
Identities = 17/60 (28%), Positives = 28/60 (46%), Gaps = 4/60 (6%)
Frame = -1
Query: 666 WAPIENHQSNATVLRN*RLDLHSFYGNGSA*FWLGL--LH--WDEEIRFFGPNVQIWQGR 499
W I+ Q + + + +GN S FWLGL +H ++E R ++ W+GR
Sbjct: 138 WTIIQRRQDGSVSFNRSWNEYKTGFGNPSGEFWLGLESIHRLTNQEARTLRVELEDWEGR 197
>SB_5823| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2324
Score = 29.1 bits (62), Expect = 3.6
Identities = 16/52 (30%), Positives = 22/52 (42%)
Frame = -1
Query: 258 HRTSCGPASFKNVDFV*AAQALASNVFPVPGGPYKRTPLGGWMPRFTNFSLC 103
H ++ + +D A+ L+SN FP P P WMP FT C
Sbjct: 1047 HTSTTADGATPVIDLREMAKVLSSN-FPAPSAPQAPMSAPSWMPVFTEGPGC 1097
>SB_43681| Best HMM Match : MAM (HMM E-Value=2.5e-20)
Length = 1468
Score = 28.7 bits (61), Expect = 4.7
Identities = 15/67 (22%), Positives = 28/67 (41%)
Frame = +1
Query: 91 VANDTQGEICESRHPPTQRSSFIWTSWYREDIAGESLRCSNKVYIFEAGWSTTCAMFIGD 270
++ DT +C PP+ S + ++ W + + G L + I+ G + +
Sbjct: 1327 ISLDTHHTLCYKNSPPSCPSGYTFSIWMKTEKDGNPLNMDKFILIYLTGSARFMVVCRTT 1386
Query: 271 GAKLVRD 291
G K V D
Sbjct: 1387 GDKFVFD 1393
>SB_25516| Best HMM Match : AAA_2 (HMM E-Value=0)
Length = 609
Score = 28.7 bits (61), Expect = 4.7
Identities = 12/19 (63%), Positives = 15/19 (78%)
Frame = +2
Query: 149 VLLYGPPGTGKTLLARACA 205
+LL GP G+GKTLLA+ A
Sbjct: 273 ILLLGPTGSGKTLLAQTIA 291
Score = 28.3 bits (60), Expect = 6.2
Identities = 16/52 (30%), Positives = 29/52 (55%), Gaps = 2/52 (3%)
Frame = +1
Query: 274 AKLVRDAFALAKEKAPAIIFIDELDAIGTKR--FDSEKAGDREVQRTMLELL 423
AKL+++A ++ I+F+DE+D IG + G VQ+ +L++L
Sbjct: 321 AKLLQEAGGNVEKAQQGIVFLDEVDKIGAVPGVHNLRDVGGEGVQQGLLKIL 372
>SB_21493| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 306
Score = 28.7 bits (61), Expect = 4.7
Identities = 15/50 (30%), Positives = 25/50 (50%), Gaps = 2/50 (4%)
Frame = +2
Query: 143 KGVLLYGPPGTGKTLLARACAAQ--TKSTFLKLAGPQLVRCSLVMVPSLS 286
+ VL+ G PGTGKT +A A + F +AG ++ + +L+
Sbjct: 170 RAVLIAGQPGTGKTAIAMGMAQSLGPDTPFTSIAGSEIFSLEMSKTEALT 219
>SB_1024| Best HMM Match : Ank (HMM E-Value=0)
Length = 891
Score = 28.7 bits (61), Expect = 4.7
Identities = 12/34 (35%), Positives = 16/34 (47%)
Frame = -1
Query: 681 RPPCHWAPIENHQSNATVLRN*RLDLHSFYGNGS 580
R P HWA + + +L D HS GNG+
Sbjct: 168 RAPLHWAAVLGNSKIVKILLRKNADYHSVDGNGA 201
>SB_43853| Best HMM Match : AAA_5 (HMM E-Value=0)
Length = 2065
Score = 28.7 bits (61), Expect = 4.7
Identities = 18/42 (42%), Positives = 23/42 (54%)
Frame = +2
Query: 140 PKGVLLYGPPGTGKTLLARACAAQTKSTFLKLAGPQLVRCSL 265
P+ +LL G PG GKT L A A K +G +LVR +L
Sbjct: 1617 PRPILLEGSPGVGKTSLVSAIA--------KASGHELVRINL 1650
>SB_379| Best HMM Match : ADK (HMM E-Value=3.2e-05)
Length = 991
Score = 28.7 bits (61), Expect = 4.7
Identities = 13/31 (41%), Positives = 19/31 (61%)
Frame = +2
Query: 137 PPKGVLLYGPPGTGKTLLARACAAQTKSTFL 229
PP V + GPP +GKTL+A+ A + + L
Sbjct: 318 PPCKVCVLGPPHSGKTLVAKQLAERYNAKVL 348
>SB_25750| Best HMM Match : AFG1_ATPase (HMM E-Value=5.6e-12)
Length = 424
Score = 28.3 bits (60), Expect = 6.2
Identities = 11/17 (64%), Positives = 14/17 (82%)
Frame = +2
Query: 140 PKGVLLYGPPGTGKTLL 190
PKG+ LYG G+GKT+L
Sbjct: 8 PKGLYLYGGVGSGKTIL 24
>SB_13109| Best HMM Match : Dynein_heavy (HMM E-Value=2.6e-09)
Length = 1703
Score = 28.3 bits (60), Expect = 6.2
Identities = 15/49 (30%), Positives = 25/49 (51%)
Frame = +2
Query: 38 SDIGGLDKQIQELIEAVVLPMTHKEKFVNLGIHPPKGVLLYGPPGTGKT 184
+ +GG +I ++I + ++L IH K +L GP GTGK+
Sbjct: 80 TSLGGKGTRINDII-VPTMDTARYSYLMDLMIHNNKPLLFVGPTGTGKS 127
>SB_56561| Best HMM Match : Hom_end_hint (HMM E-Value=4.1)
Length = 390
Score = 27.9 bits (59), Expect = 8.3
Identities = 20/62 (32%), Positives = 29/62 (46%), Gaps = 1/62 (1%)
Frame = +1
Query: 283 VRDAFA-LAKEKAPAIIFIDELDAIGTKRFDSEKAGDREVQRTMLELLNQLDGFSSTADI 459
V D A +AK+ + I D L + TK + + V R E+ ++ GF ADI
Sbjct: 123 VNDRIAKIAKKLWGSSIAADRLKPLLTKHAKPQNCHEITVPRVNSEIWAKMPGFKRKADI 182
Query: 460 KV 465
KV
Sbjct: 183 KV 184
>SB_35394| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 100
Score = 27.9 bits (59), Expect = 8.3
Identities = 15/53 (28%), Positives = 24/53 (45%), Gaps = 2/53 (3%)
Frame = +2
Query: 149 VLLYGPPGTGKTLLARACAAQTKSTFL--KLAGPQLVRCSLVMVPSLSATPLH 301
+L+ G PG+GK+ L C + K + + G C++ MV L H
Sbjct: 48 MLVQGVPGSGKSSLVAYCTLEAKKVAIVEDIQGKCWQPCTVYMVQDLKGMTAH 100
>SB_4649| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 475
Score = 27.9 bits (59), Expect = 8.3
Identities = 13/31 (41%), Positives = 18/31 (58%)
Frame = +3
Query: 486 GHFGPCPARSGRLDRKIEFPHPNEEARARIM 578
G FG + SG++D +I+ H E RAR M
Sbjct: 169 GEFGGFASVSGKIDIEIKINHEGEVNRARFM 199
>SB_18929| Best HMM Match : BRCT (HMM E-Value=1.4e-08)
Length = 1213
Score = 27.9 bits (59), Expect = 8.3
Identities = 10/33 (30%), Positives = 20/33 (60%)
Frame = -2
Query: 218 TLFEQRKLSPAMSSLYQEVHIKELLWVGGCRDS 120
T+F+ K + +L + +H+ +LWV CR++
Sbjct: 143 TIFKDGKKATREKALKKGIHLVTVLWVESCRET 175
>SB_10418| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 477
Score = 27.9 bits (59), Expect = 8.3
Identities = 13/21 (61%), Positives = 13/21 (61%)
Frame = +2
Query: 143 KGVLLYGPPGTGKTLLARACA 205
K LL GPPG GKT LA A
Sbjct: 381 KVALLCGPPGLGKTTLAHVIA 401
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 24,194,572
Number of Sequences: 59808
Number of extensions: 530868
Number of successful extensions: 1912
Number of sequences better than 10.0: 54
Number of HSP's better than 10.0 without gapping: 1697
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1896
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 1805522550
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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