Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= prgv0290
(693 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At3g05530.1 68416.m00606 26S proteasome AAA-ATPase subunit (RPT5... 152 2e-37
At1g09100.1 68414.m01016 26S protease regulatory subunit 6A, put... 152 2e-37
At4g29040.1 68417.m04153 26S proteasome AAA-ATPase subunit (RPT2... 123 1e-28
At2g20140.1 68415.m02353 26S protease regulatory complex subunit... 123 1e-28
At5g58290.1 68418.m07297 26S proteasome AAA-ATPase subunit (RPT3... 121 5e-28
At5g20000.1 68418.m02380 26S proteasome AAA-ATPase subunit, puta... 109 2e-24
At5g19990.1 68418.m02379 26S proteasome AAA-ATPase subunit (RPT6a) 109 2e-24
At1g53750.1 68414.m06115 26S proteasome AAA-ATPase subunit (RPT1... 107 5e-24
At5g43010.1 68418.m05245 26S proteasome AAA-ATPase subunit (RPT4... 107 7e-24
At1g45000.1 68414.m05158 26S proteasome regulatory complex subun... 107 9e-24
At1g53780.1 68414.m06120 26S proteasome AAA-ATPase subunit, puta... 106 1e-23
At2g30950.1 68415.m03775 FtsH protease (VAR2) identical to zinc ... 91 5e-19
At1g06430.1 68414.m00680 FtsH protease, putative similar to zinc... 91 5e-19
At5g42270.1 68418.m05145 FtsH protease, putative similar to FtsH... 91 8e-19
At1g50250.1 68414.m05634 cell division protein ftsH homolog 1, c... 91 8e-19
At5g03340.1 68418.m00286 cell division cycle protein 48, putativ... 89 3e-18
At3g53230.1 68416.m05865 cell division cycle protein 48, putativ... 89 3e-18
At3g09840.1 68416.m01174 cell division cycle protein 48 (CDC48A)... 88 5e-18
At3g47060.1 68416.m05110 FtsH protease, putative contains simila... 87 1e-17
At5g64580.1 68418.m08116 AAA-type ATPase family protein similar ... 86 2e-17
At5g58870.1 68418.m07376 FtsH protease, putative contains simila... 85 6e-17
At5g53170.1 68418.m06610 FtsH protease, putative similar to ATP-... 83 2e-16
At5g15250.1 68418.m01786 FtsH protease, putative similar to FtsH... 83 2e-16
At2g29080.1 68415.m03535 FtsH protease, putative similar to AAA-... 83 2e-16
At3g16290.1 68416.m02056 FtsH protease, putative contains simila... 82 3e-16
At3g56690.1 68416.m06306 calmodulin-binding protein identical to... 81 9e-16
At3g02450.1 68416.m00232 cell division protein ftsH, putative si... 80 2e-15
At1g07510.1 68414.m00804 FtsH protease, putative similar to AAA-... 79 3e-15
At1g03000.1 68414.m00271 AAA-type ATPase family protein contains... 78 5e-15
At2g45500.1 68415.m05659 AAA-type ATPase family protein similar ... 73 1e-13
At2g26140.1 68415.m03137 FtsH protease, putative contains simila... 73 2e-13
At1g05910.1 68414.m00620 cell division cycle protein 48-related ... 70 1e-12
At4g23940.1 68417.m03443 FtsH protease, putative contains simila... 69 3e-12
At2g27600.1 68415.m03346 AAA-type ATPase family protein / vacuol... 69 4e-12
At3g19740.1 68416.m02499 AAA-type ATPase family protein contains... 68 5e-12
At2g03670.1 68415.m00326 AAA-type ATPase family protein contains... 68 5e-12
At1g50140.1 68414.m05623 AAA-type ATPase family protein contains... 68 5e-12
At1g80350.1 68414.m09406 katanin 1 (KTN1) identical to katanin 1... 68 7e-12
At5g53540.1 68418.m06653 MSP1 protein, putative / intramitochond... 67 9e-12
At3g01610.1 68416.m00092 AAA-type ATPase family protein contains... 66 2e-11
At4g27680.1 68417.m03980 MSP1 protein, putative / intramitochond... 66 3e-11
At2g34560.2 68415.m04246 katanin, putative similar to katanin p6... 64 6e-11
At2g34560.1 68415.m04245 katanin, putative similar to katanin p6... 64 6e-11
At1g64110.2 68414.m07264 AAA-type ATPase family protein contains... 64 8e-11
At1g64110.1 68414.m07263 AAA-type ATPase family protein contains... 64 8e-11
At4g28000.1 68417.m04016 AAA-type ATPase family protein contains... 63 1e-10
At3g15120.1 68416.m01913 AAA-type ATPase family protein contains... 62 3e-10
At5g08470.1 68418.m00999 peroxisome biogenesis protein (PEX1) id... 62 4e-10
At4g24860.1 68417.m03559 AAA-type ATPase family protein contains... 62 4e-10
At1g02890.1 68414.m00256 AAA-type ATPase family protein contains... 62 4e-10
At3g27120.1 68416.m03393 spastin ATPase, putative similar to SWI... 61 6e-10
At4g02480.1 68417.m00335 AAA-type ATPase family protein contains... 61 8e-10
At4g04180.1 68417.m00593 AAA-type ATPase family protein contains... 58 7e-09
At1g62130.1 68414.m07010 AAA-type ATPase family protein contains... 51 6e-07
At3g04340.1 68416.m00459 FtsH protease family protein similar to... 46 3e-05
At4g04910.1 68417.m00714 AAA-type ATPase family protein similar ... 45 6e-05
At1g79560.1 68414.m09275 FtsH protease, putative contains simila... 45 6e-05
At5g16930.1 68418.m01984 AAA-type ATPase family protein contains... 40 0.001
At2g18330.1 68415.m02136 AAA-type ATPase family protein contains... 40 0.001
At5g40000.1 68418.m04851 AAA-type ATPase family protein BCS1 nuc... 39 0.003
At4g36580.1 68417.m05193 AAA-type ATPase family protein contains... 39 0.004
At5g17760.2 68418.m02083 AAA-type ATPase family protein contains... 37 0.011
At5g17760.1 68418.m02082 AAA-type ATPase family protein contains... 37 0.011
At3g28570.1 68416.m03567 AAA-type ATPase family protein contains... 37 0.015
At3g03060.1 68416.m00302 AAA-type ATPase family protein contains... 37 0.015
At5g17730.1 68418.m02079 AAA-type ATPase family protein contains... 36 0.019
At2g18193.1 68415.m02117 AAA-type ATPase family protein contains... 36 0.019
At1g43910.1 68414.m05066 AAA-type ATPase family protein contains... 36 0.025
At4g05380.1 68417.m00820 AAA-type ATPase family protein contains... 36 0.034
At3g28600.1 68416.m03570 AAA-type ATPase family protein contains... 36 0.034
At5g17740.1 68418.m02080 AAA-type ATPase family protein h-bcs1, ... 35 0.045
At2g18190.1 68415.m02116 AAA-type ATPase family protein contains... 35 0.045
At3g50940.1 68416.m05577 AAA-type ATPase family protein contains... 35 0.059
At3g28610.1 68416.m03571 AAA-type ATPase family protein contains... 35 0.059
At3g24530.1 68416.m03080 AAA-type ATPase family protein / ankyri... 34 0.078
At5g40010.1 68418.m04852 AAA-type ATPase family protein contains... 34 0.10
At3g28540.1 68416.m03564 AAA-type ATPase family protein contains... 34 0.10
At3g28520.1 68416.m03562 AAA-type ATPase family protein contains... 34 0.10
At1g08270.2 68414.m00912 expressed protein low similarity to SP|... 34 0.10
At4g31860.2 68417.m04527 protein phosphatase 2C, putative / PP2C... 33 0.14
At4g31860.1 68417.m04526 protein phosphatase 2C, putative / PP2C... 33 0.14
At3g28510.1 68416.m03561 AAA-type ATPase family protein contains... 33 0.14
At1g56510.1 68414.m06498 disease resistance protein (TIR-NBS-LRR... 33 0.14
At1g06720.1 68414.m00714 expressed protein contains Pfam domain,... 33 0.14
At1g01570.1 68414.m00074 fringe-related protein + similar to hyp... 33 0.14
At4g30250.1 68417.m04301 AAA-type ATPase family protein contains... 33 0.18
At3g50930.1 68416.m05576 AAA-type ATPase family protein contains... 33 0.18
At4g24710.1 68417.m03536 AAA-type ATPase family protein similar ... 33 0.24
At3g28580.1 68416.m03568 AAA-type ATPase family protein contains... 33 0.24
At5g57480.1 68418.m07183 AAA-type ATPase family protein contains... 32 0.31
At4g25835.1 68417.m03716 AAA-type ATPase family protein contains... 32 0.31
At1g67120.1 68414.m07636 midasin-related similar to Midasin (MID... 32 0.31
At5g22330.1 68418.m02605 TATA box-binding protein-interacting pr... 32 0.41
At2g36380.1 68415.m04464 ABC transporter family protein related ... 32 0.41
At1g21690.2 68414.m02715 replication factor C 37 kDa, putative S... 32 0.41
At1g21690.1 68414.m02714 replication factor C 37 kDa, putative S... 32 0.41
At3g30842.1 68416.m03968 ABC transporter protein, putative simil... 31 0.55
At3g04210.1 68416.m00445 disease resistance protein (TIR-NBS cla... 31 0.55
At1g66950.1 68414.m07612 ABC transporter family protein similar ... 31 0.55
At5g17750.1 68418.m02081 AAA-type ATPase family protein contains... 31 0.73
At4g28070.1 68417.m04026 AFG1-like ATPase family protein contain... 31 0.73
At3g25510.1 68416.m03172 disease resistance protein (TIR-NBS-LRR... 31 0.73
At5g58120.1 68418.m07272 disease resistance protein (TIR-NBS-LRR... 30 1.3
At5g33393.1 68418.m03983 hypothetical protein 30 1.3
At4g15230.1 68417.m02333 ABC transporter family protein similar ... 30 1.3
At3g29800.1 68416.m03792 AAA-type ATPase family contains Pfam pr... 30 1.3
At2g29940.1 68415.m03642 ABC transporter family protein similar ... 30 1.3
At2g25070.1 68415.m02999 protein phosphatase 2C, putative / PP2C... 30 1.3
At4g15215.1 68417.m02332 ABC transporter family protein similar ... 30 1.7
At3g44630.3 68416.m04798 disease resistance protein RPP1-WsB-lik... 30 1.7
At3g44630.2 68416.m04800 disease resistance protein RPP1-WsB-lik... 30 1.7
At3g44630.1 68416.m04799 disease resistance protein RPP1-WsB-lik... 30 1.7
At3g44480.1 68416.m04781 disease resistance protein (TIR-NBS-LRR... 30 1.7
At3g16340.1 68416.m02066 ABC transporter family protein similar ... 30 1.7
At2g37280.1 68415.m04573 ABC transporter family protein similar ... 30 1.7
At1g77470.1 68414.m09021 replication factor C 36 kDA, putative s... 30 1.7
At1g63870.1 68414.m07233 disease resistance protein (TIR-NBS-LRR... 30 1.7
At1g33360.1 68414.m04129 ATP-dependent Clp protease ATP-binding ... 30 1.7
At5g49840.1 68418.m06172 ATP-dependent Clp protease ATP-binding ... 29 2.2
At5g47040.1 68418.m05797 Lon protease homolog 1, mitochondrial (... 29 2.2
At4g30490.1 68417.m04329 AFG1-like ATPase family protein contain... 29 2.2
At4g15570.1 68417.m02379 tRNA-splicing endonuclease positive eff... 29 2.2
At3g53480.1 68416.m05904 ABC transporter family protein PDR5-lik... 29 2.2
At1g24290.1 68414.m03065 AAA-type ATPase family protein similar ... 29 2.2
At5g53350.1 68418.m06630 ATP-dependent Clp protease ATP-binding ... 29 2.9
At5g40910.1 68418.m04967 disease resistance protein (TIR-NBS-LRR... 29 2.9
At5g18350.1 68418.m02159 disease resistance protein (TIR-NBS-LRR... 29 2.9
At4g15236.1 68417.m02335 ABC transporter family protein similar ... 29 2.9
At3g04220.1 68416.m00446 disease resistance protein (TIR-NBS-LRR... 29 2.9
At1g63750.1 68414.m07214 disease resistance protein (TIR-NBS-LRR... 29 2.9
At5g67630.1 68418.m08527 DNA helicase, putative similar to RuvB-... 29 3.9
At5g26860.1 68418.m03204 Lon protease homolog 2, mitochondrial a... 29 3.9
At4g25750.1 68417.m03707 ABC transporter family protein Bactroce... 29 3.9
At4g14670.1 68417.m02255 heat shock protein 101, putative / HSP1... 29 3.9
At2g26910.1 68415.m03228 ABC transporter family protein similar ... 29 3.9
At1g08270.1 68414.m00913 expressed protein low similarity to SP|... 29 3.9
At5g41540.1 68418.m05048 disease resistance protein (TIR-NBS-LRR... 28 5.1
At5g11250.1 68418.m01314 disease resistance protein (TIR-NBS-LRR... 28 5.1
At3g16560.1 68416.m02116 protein phosphatase 2C-related / PP2C-r... 28 5.1
At3g05780.1 68416.m00649 Lon protease, putative similar to Lon p... 28 5.1
At1g59870.1 68414.m06745 ABC transporter family protein similar ... 28 5.1
At5g38850.1 68418.m04699 disease resistance protein (TIR-NBS-LRR... 28 6.8
At3g60880.2 68416.m06811 dihydrodipicolinate synthase 1 (DHDPS1)... 28 6.8
At3g60880.1 68416.m06810 dihydrodipicolinate synthase 1 (DHDPS1)... 28 6.8
At3g58120.1 68416.m06481 bZIP transcription factor family protei... 28 6.8
At2g46620.1 68415.m05815 AAA-type ATPase family protein contains... 28 6.8
At2g14080.1 68415.m01566 disease resistance protein (TIR-NBS-LRR... 28 6.8
At1g33290.2 68414.m04118 sporulation protein-related isoform con... 28 6.8
At1g33290.1 68414.m04117 sporulation protein-related isoform con... 28 6.8
At1g15210.1 68414.m01818 ABC transporter family protein Similar ... 28 6.8
At5g52860.1 68418.m06561 ABC transporter family protein 27 8.9
At5g45260.1 68418.m05555 disease resistance protein (TIR-NBS-LRR... 27 8.9
At5g41550.1 68418.m05049 disease resistance protein (TIR-NBS-LRR... 27 8.9
At4g16990.3 68417.m02563 disease resistance protein (TIR-NBS cla... 27 8.9
At4g16990.2 68417.m02562 disease resistance protein (TIR-NBS cla... 27 8.9
At4g16990.1 68417.m02561 disease resistance protein (TIR-NBS cla... 27 8.9
At4g14370.1 68417.m02214 disease resistance protein (TIR-NBS-LRR... 27 8.9
At2g34680.1 68415.m04260 leucine-rich repeat family protein cont... 27 8.9
At2g30940.2 68415.m03773 protein kinase family protein contains ... 27 8.9
At2g30940.1 68415.m03772 protein kinase family protein contains ... 27 8.9
At1g74310.1 68414.m08605 heat shock protein 101 (HSP101) identic... 27 8.9
At1g73170.1 68414.m08466 expressed protein 27 8.9
At1g15520.1 68414.m01867 ABC transporter family protein similar ... 27 8.9
>At3g05530.1 68416.m00606 26S proteasome AAA-ATPase subunit (RPT5a)
identical to GB:AAF22525 GI:6652886 from [Arabidopsis
thaliana]
Length = 424
Score = 152 bits (368), Expect = 2e-37
Identities = 67/82 (81%), Positives = 77/82 (93%)
Frame = +2
Query: 11 VDERPTEQYSDIGGLDKQIQELIEAVVLPMTHKEKFVNLGIHPPKGVLLYGPPGTGKTLL 190
VDE+PTE Y+DIGGL+KQIQEL+EA+VLPMTHKE+F LG+ PPKGVLLYGPPGTGKTL+
Sbjct: 162 VDEKPTEDYNDIGGLEKQIQELVEAIVLPMTHKERFEKLGVRPPKGVLLYGPPGTGKTLM 221
Query: 191 ARACAAQTKSTFLKLAGPQLVR 256
ARACAAQT +TFLKLAGPQLV+
Sbjct: 222 ARACAAQTNATFLKLAGPQLVQ 243
Score = 151 bits (366), Expect = 4e-37
Identities = 75/84 (89%), Positives = 77/84 (91%)
Frame = +1
Query: 256 MFIGDGAKLVRDAFALAKEKAPAIIFIDELDAIGTKRFDSEKAGDREVQRTMLELLNQLD 435
MFIGDGAKLVRDAF LAKEKAP IIFIDE+DAIGTKRFDSE +GDREVQRTMLELLNQLD
Sbjct: 244 MFIGDGAKLVRDAFQLAKEKAPCIIFIDEIDAIGTKRFDSEVSGDREVQRTMLELLNQLD 303
Query: 436 GFSSTADIKVIAATNRVDILDPAL 507
GFSS IKVIAATNR DILDPAL
Sbjct: 304 GFSSDERIKVIAATNRADILDPAL 327
Score = 106 bits (254), Expect = 2e-23
Identities = 52/64 (81%), Positives = 54/64 (84%)
Frame = +3
Query: 498 PCPARSGRLDRKIEFPHPNEEARARIMQIHSRKMNVSPDVNFEELSRSTDDFQWAPSGKA 677
P RSGRLDRKIEFPHP EEARARI+QIHSRKMNV PDVNFEEL+RSTDDF A KA
Sbjct: 325 PALMRSGRLDRKIEFPHPTEEARARILQIHSRKMNVHPDVNFEELARSTDDFNGAQL-KA 383
Query: 678 VCVE 689
VCVE
Sbjct: 384 VCVE 387
>At1g09100.1 68414.m01016 26S protease regulatory subunit 6A,
putative identical to SP:O04019 from [Arabidopsis
thaliana]
Length = 423
Score = 152 bits (368), Expect = 2e-37
Identities = 68/82 (82%), Positives = 77/82 (93%)
Frame = +2
Query: 11 VDERPTEQYSDIGGLDKQIQELIEAVVLPMTHKEKFVNLGIHPPKGVLLYGPPGTGKTLL 190
VDE+PTE Y+DIGGL+KQIQEL+EA+VLPMTHKE+F LGI PPKGVLLYGPPGTGKTL+
Sbjct: 161 VDEKPTEDYNDIGGLEKQIQELVEAIVLPMTHKEQFEKLGIRPPKGVLLYGPPGTGKTLM 220
Query: 191 ARACAAQTKSTFLKLAGPQLVR 256
ARACAAQT +TFLKLAGPQLV+
Sbjct: 221 ARACAAQTNATFLKLAGPQLVQ 242
Score = 149 bits (362), Expect = 1e-36
Identities = 74/84 (88%), Positives = 77/84 (91%)
Frame = +1
Query: 256 MFIGDGAKLVRDAFALAKEKAPAIIFIDELDAIGTKRFDSEKAGDREVQRTMLELLNQLD 435
MFIGDGAKLVRDAF LAKEK+P IIFIDE+DAIGTKRFDSE +GDREVQRTMLELLNQLD
Sbjct: 243 MFIGDGAKLVRDAFLLAKEKSPCIIFIDEIDAIGTKRFDSEVSGDREVQRTMLELLNQLD 302
Query: 436 GFSSTADIKVIAATNRVDILDPAL 507
GFSS IKVIAATNR DILDPAL
Sbjct: 303 GFSSDDRIKVIAATNRADILDPAL 326
Score = 102 bits (244), Expect = 3e-22
Identities = 50/64 (78%), Positives = 53/64 (82%)
Frame = +3
Query: 498 PCPARSGRLDRKIEFPHPNEEARARIMQIHSRKMNVSPDVNFEELSRSTDDFQWAPSGKA 677
P RSGRLDRKIEFPHP EEAR RI+QIHSRKMNV+ DVNFEEL+RSTDDF A KA
Sbjct: 324 PALMRSGRLDRKIEFPHPTEEARGRILQIHSRKMNVNADVNFEELARSTDDFNGAQL-KA 382
Query: 678 VCVE 689
VCVE
Sbjct: 383 VCVE 386
>At4g29040.1 68417.m04153 26S proteasome AAA-ATPase subunit (RPT2a)
almost identical to 26S proteasome AAA-ATPase subunit
RPT2a (GI:6652880) {Arabidopsis thaliana}; Drosophila
melanogaster 26S proteasome subunit 4 ATPase,
PID:g1066065
Length = 443
Score = 123 bits (296), Expect = 1e-28
Identities = 53/83 (63%), Positives = 70/83 (84%)
Frame = +1
Query: 259 FIGDGAKLVRDAFALAKEKAPAIIFIDELDAIGTKRFDSEKAGDREVQRTMLELLNQLDG 438
++GDG KLVR+ F +A + +P+I+FIDE+DA+GTKR+D+ G+RE+QRTMLELLNQLDG
Sbjct: 262 YLGDGPKLVRELFRVADDLSPSIVFIDEIDAVGTKRYDAHSGGEREIQRTMLELLNQLDG 321
Query: 439 FSSTADIKVIAATNRVDILDPAL 507
F S D+KVI ATNR++ LDPAL
Sbjct: 322 FDSRGDVKVILATNRIESLDPAL 344
Score = 110 bits (264), Expect = 1e-24
Identities = 51/92 (55%), Positives = 69/92 (75%)
Frame = +2
Query: 8 RVDERPTEQYSDIGGLDKQIQELIEAVVLPMTHKEKFVNLGIHPPKGVLLYGPPGTGKTL 187
+V++ P E Y+DIGGL+ QIQE+ EAV LP+TH E + ++GI PPKGV+LYG PGTGKTL
Sbjct: 178 KVEKAPLESYADIGGLEAQIQEIKEAVELPLTHPELYEDIGIKPPKGVILYGEPGTGKTL 237
Query: 188 LARACAAQTKSTFLKLAGPQLVRCSLVMVPSL 283
LA+A A T +TFL++ G +L++ L P L
Sbjct: 238 LAKAVANSTSATFLRVVGSELIQKYLGDGPKL 269
Score = 66.9 bits (156), Expect = 1e-11
Identities = 33/64 (51%), Positives = 41/64 (64%)
Frame = +3
Query: 498 PCPARSGRLDRKIEFPHPNEEARARIMQIHSRKMNVSPDVNFEELSRSTDDFQWAPSGKA 677
P R GR+DRKIEFP P+ + R RI QIH+ KM +S DVN EE + D+F A KA
Sbjct: 342 PALLRPGRIDRKIEFPLPDIKTRRRIFQIHTSKMTLSEDVNLEEFVMTKDEFSGADI-KA 400
Query: 678 VCVE 689
+C E
Sbjct: 401 ICTE 404
>At2g20140.1 68415.m02353 26S protease regulatory complex subunit 4,
putative similar to Swiss-Prot:P48601 26S protease
regulatory subunit 4 (P26S4) [Drosophila melanogaster]
Length = 443
Score = 123 bits (296), Expect = 1e-28
Identities = 53/83 (63%), Positives = 70/83 (84%)
Frame = +1
Query: 259 FIGDGAKLVRDAFALAKEKAPAIIFIDELDAIGTKRFDSEKAGDREVQRTMLELLNQLDG 438
++GDG KLVR+ F +A + +P+I+FIDE+DA+GTKR+D+ G+RE+QRTMLELLNQLDG
Sbjct: 262 YLGDGPKLVRELFRVADDLSPSIVFIDEIDAVGTKRYDANSGGEREIQRTMLELLNQLDG 321
Query: 439 FSSTADIKVIAATNRVDILDPAL 507
F S D+KVI ATNR++ LDPAL
Sbjct: 322 FDSRGDVKVILATNRIESLDPAL 344
Score = 110 bits (264), Expect = 1e-24
Identities = 51/92 (55%), Positives = 69/92 (75%)
Frame = +2
Query: 8 RVDERPTEQYSDIGGLDKQIQELIEAVVLPMTHKEKFVNLGIHPPKGVLLYGPPGTGKTL 187
+V++ P E Y+DIGGL+ QIQE+ EAV LP+TH E + ++GI PPKGV+LYG PGTGKTL
Sbjct: 178 KVEKAPLESYADIGGLEAQIQEIKEAVELPLTHPELYEDIGIKPPKGVILYGEPGTGKTL 237
Query: 188 LARACAAQTKSTFLKLAGPQLVRCSLVMVPSL 283
LA+A A T +TFL++ G +L++ L P L
Sbjct: 238 LAKAVANSTSATFLRVVGSELIQKYLGDGPKL 269
Score = 65.7 bits (153), Expect = 3e-11
Identities = 32/64 (50%), Positives = 41/64 (64%)
Frame = +3
Query: 498 PCPARSGRLDRKIEFPHPNEEARARIMQIHSRKMNVSPDVNFEELSRSTDDFQWAPSGKA 677
P R GR+DRKIEFP P+ + R RI QIH+ KM ++ DVN EE + D+F A KA
Sbjct: 342 PALLRPGRIDRKIEFPLPDIKTRRRIFQIHTSKMTLAEDVNLEEFVMTKDEFSGADI-KA 400
Query: 678 VCVE 689
+C E
Sbjct: 401 ICTE 404
>At5g58290.1 68418.m07297 26S proteasome AAA-ATPase subunit (RPT3)
identical to 26S proteasome AAA-ATPase subunit RPT3
GI:6652882 from [Arabidopsis thaliana]
Length = 408
Score = 121 bits (291), Expect = 5e-28
Identities = 57/101 (56%), Positives = 73/101 (72%)
Frame = +1
Query: 259 FIGDGAKLVRDAFALAKEKAPAIIFIDELDAIGTKRFDSEKAGDREVQRTMLELLNQLDG 438
++G+G ++VRD F LAKE APAIIFIDE+DAI T RFD++ DREVQR ++ELLNQ+DG
Sbjct: 229 YLGEGPRMVRDVFRLAKENAPAIIFIDEVDAIATARFDAQTGADREVQRILMELLNQMDG 288
Query: 439 FSSTADIKVIAATNRVDILDPALPDLDVWTEKSNFLIPMKK 561
F T ++KVI ATNR D LDPAL K F +P ++
Sbjct: 289 FDQTVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRR 329
Score = 99 bits (238), Expect = 1e-21
Identities = 44/80 (55%), Positives = 59/80 (73%)
Frame = +2
Query: 17 ERPTEQYSDIGGLDKQIQELIEAVVLPMTHKEKFVNLGIHPPKGVLLYGPPGTGKTLLAR 196
E+P Y+DIGG D Q QE+ EAV LP+TH E + +GI PP+GVLLYGPPGTGKT+LA+
Sbjct: 148 EKPDVSYNDIGGCDIQKQEIREAVELPLTHHELYKQIGIDPPRGVLLYGPPGTGKTMLAK 207
Query: 197 ACAAQTKSTFLKLAGPQLVR 256
A A T + F+++ G + V+
Sbjct: 208 AVANHTTAAFIRVVGSEFVQ 227
Score = 48.4 bits (110), Expect = 4e-06
Identities = 25/64 (39%), Positives = 35/64 (54%)
Frame = +3
Query: 498 PCPARSGRLDRKIEFPHPNEEARARIMQIHSRKMNVSPDVNFEELSRSTDDFQWAPSGKA 677
P R GRLDRKIEFP P+ + + Q+ + KMN+S +V+ E+ D A A
Sbjct: 309 PALLRPGRLDRKIEFPLPDRRQKRLVFQVCTSKMNLSDEVDLEDYVSRPDKIS-AAEIAA 367
Query: 678 VCVE 689
+C E
Sbjct: 368 ICQE 371
>At5g20000.1 68418.m02380 26S proteasome AAA-ATPase subunit,
putative almost identical to 26S proteasome AAA-ATPase
subunit RPT6a GI:6652888 from [Arabidopsis thaliana];
almost identical to a member of conserved Sug1 CAD
family AtSUG1 GI:13537115 from [Arabidopsis thaliana]
Length = 419
Score = 109 bits (262), Expect = 2e-24
Identities = 51/84 (60%), Positives = 69/84 (82%), Gaps = 1/84 (1%)
Frame = +1
Query: 259 FIGDGAKLVRDAFALAKEKAPAIIFIDELDAIGTKRFDSEKA-GDREVQRTMLELLNQLD 435
+IG+G+++VR+ F +A+E AP+IIF+DE+D+IG+ R +S GD EVQRTMLELLNQLD
Sbjct: 235 YIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSARMESGSGNGDSEVQRTMLELLNQLD 294
Query: 436 GFSSTADIKVIAATNRVDILDPAL 507
GF ++ IKV+ ATNR+DILD AL
Sbjct: 295 GFEASNKIKVLMATNRIDILDQAL 318
Score = 101 bits (242), Expect = 5e-22
Identities = 53/112 (47%), Positives = 71/112 (63%)
Frame = +2
Query: 8 RVDERPTEQYSDIGGLDKQIQELIEAVVLPMTHKEKFVNLGIHPPKGVLLYGPPGTGKTL 187
+V++ P Y IGGLD+QI+E+ E + LP+ H E F +LGI PKGVLLYGPPGTGKTL
Sbjct: 151 KVEKVPDSTYDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGKTL 210
Query: 188 LARACAAQTKSTFLKLAGPQLVRCSLVMVPSLSATPLHWLKRRHQQSSSLMN 343
LARA A T TF++++G +LV+ + S L + R H S M+
Sbjct: 211 LARAVAHHTDCTFIRVSGSELVQ-KYIGEGSRMVRELFVMAREHAPSIIFMD 261
Score = 61.7 bits (143), Expect = 4e-10
Identities = 29/60 (48%), Positives = 42/60 (70%)
Frame = +3
Query: 510 RSGRLDRKIEFPHPNEEARARIMQIHSRKMNVSPDVNFEELSRSTDDFQWAPSGKAVCVE 689
R GR+DRKIEFP+PNEE+R I++IHSRKMN+ ++ ++++ + A KAVC E
Sbjct: 320 RPGRIDRKIEFPNPNEESRFDILKIHSRKMNLMRGIDLKKIAEKMNGASGAEL-KAVCTE 378
>At5g19990.1 68418.m02379 26S proteasome AAA-ATPase subunit (RPT6a)
Length = 419
Score = 109 bits (262), Expect = 2e-24
Identities = 51/84 (60%), Positives = 69/84 (82%), Gaps = 1/84 (1%)
Frame = +1
Query: 259 FIGDGAKLVRDAFALAKEKAPAIIFIDELDAIGTKRFDSEKA-GDREVQRTMLELLNQLD 435
+IG+G+++VR+ F +A+E AP+IIF+DE+D+IG+ R +S GD EVQRTMLELLNQLD
Sbjct: 235 YIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSARMESGSGNGDSEVQRTMLELLNQLD 294
Query: 436 GFSSTADIKVIAATNRVDILDPAL 507
GF ++ IKV+ ATNR+DILD AL
Sbjct: 295 GFEASNKIKVLMATNRIDILDQAL 318
Score = 101 bits (242), Expect = 5e-22
Identities = 53/112 (47%), Positives = 71/112 (63%)
Frame = +2
Query: 8 RVDERPTEQYSDIGGLDKQIQELIEAVVLPMTHKEKFVNLGIHPPKGVLLYGPPGTGKTL 187
+V++ P Y IGGLD+QI+E+ E + LP+ H E F +LGI PKGVLLYGPPGTGKTL
Sbjct: 151 KVEKVPDSTYDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGKTL 210
Query: 188 LARACAAQTKSTFLKLAGPQLVRCSLVMVPSLSATPLHWLKRRHQQSSSLMN 343
LARA A T TF++++G +LV+ + S L + R H S M+
Sbjct: 211 LARAVAHHTDCTFIRVSGSELVQ-KYIGEGSRMVRELFVMAREHAPSIIFMD 261
Score = 61.7 bits (143), Expect = 4e-10
Identities = 29/60 (48%), Positives = 42/60 (70%)
Frame = +3
Query: 510 RSGRLDRKIEFPHPNEEARARIMQIHSRKMNVSPDVNFEELSRSTDDFQWAPSGKAVCVE 689
R GR+DRKIEFP+PNEE+R I++IHSRKMN+ ++ ++++ + A KAVC E
Sbjct: 320 RPGRIDRKIEFPNPNEESRFDILKIHSRKMNLMRGIDLKKIAEKMNGASGAEL-KAVCTE 378
>At1g53750.1 68414.m06115 26S proteasome AAA-ATPase subunit (RPT1a)
similar to 26S proteasome ATPase subunit GI:1395190 from
[Spinacia oleracea]
Length = 426
Score = 107 bits (258), Expect = 5e-24
Identities = 48/83 (57%), Positives = 63/83 (75%)
Frame = +1
Query: 259 FIGDGAKLVRDAFALAKEKAPAIIFIDELDAIGTKRFDSEKAGDREVQRTMLELLNQLDG 438
++G+GA++VR+ F +A+ K I+F DE+DAIG RFD GD EVQRTMLE++NQLDG
Sbjct: 242 YVGEGARMVRELFQMARSKKACIVFFDEVDAIGGARFDDGVGGDNEVQRTMLEIVNQLDG 301
Query: 439 FSSTADIKVIAATNRVDILDPAL 507
F + +IKV+ ATNR D LDPAL
Sbjct: 302 FDARGNIKVLMATNRPDTLDPAL 324
Score = 107 bits (256), Expect = 9e-24
Identities = 48/82 (58%), Positives = 63/82 (76%)
Frame = +2
Query: 11 VDERPTEQYSDIGGLDKQIQELIEAVVLPMTHKEKFVNLGIHPPKGVLLYGPPGTGKTLL 190
V+E+P Y+D+GG +QI+++ E V LPM H EKFV LGI PPKGVL YGPPGTGKTLL
Sbjct: 159 VEEKPDVTYNDVGGCKEQIEKMREVVELPMLHPEKFVKLGIDPPKGVLCYGPPGTGKTLL 218
Query: 191 ARACAAQTKSTFLKLAGPQLVR 256
ARA A +T + F+++ G +LV+
Sbjct: 219 ARAVANRTDACFIRVIGSELVQ 240
Score = 54.0 bits (124), Expect = 9e-08
Identities = 28/64 (43%), Positives = 39/64 (60%)
Frame = +3
Query: 498 PCPARSGRLDRKIEFPHPNEEARARIMQIHSRKMNVSPDVNFEELSRSTDDFQWAPSGKA 677
P R GRLDRK+EF P+ E+R +I +IH+R MN D+ FE L+R + A ++
Sbjct: 322 PALLRPGRLDRKVEFGLPDLESRTQIFKIHTRTMNCERDIRFELLARLCPNSTGADI-RS 380
Query: 678 VCVE 689
VC E
Sbjct: 381 VCTE 384
>At5g43010.1 68418.m05245 26S proteasome AAA-ATPase subunit (RPT4a)
gb|AAF22524.1
Length = 399
Score = 107 bits (257), Expect = 7e-24
Identities = 47/83 (56%), Positives = 64/83 (77%)
Frame = +1
Query: 259 FIGDGAKLVRDAFALAKEKAPAIIFIDELDAIGTKRFDSEKAGDREVQRTMLELLNQLDG 438
+IG+ A+L+R+ F A+E P IIF+DE+DAIG +RF + DRE+QRT++ELLNQLDG
Sbjct: 213 YIGESARLIREMFNYAREHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQLDG 272
Query: 439 FSSTADIKVIAATNRVDILDPAL 507
F + +K+I ATNR D+LDPAL
Sbjct: 273 FDNLGKVKMIMATNRPDVLDPAL 295
Score = 90.6 bits (215), Expect = 8e-19
Identities = 41/73 (56%), Positives = 54/73 (73%)
Frame = +2
Query: 35 YSDIGGLDKQIQELIEAVVLPMTHKEKFVNLGIHPPKGVLLYGPPGTGKTLLARACAAQT 214
YS +GGL QI+EL E++ LP+ + E F+ +GI PPKGVLLYGPPGTGKTLLARA A+
Sbjct: 138 YSAVGGLGDQIRELRESIELPLMNPELFLRVGIKPPKGVLLYGPPGTGKTLLARAIASNI 197
Query: 215 KSTFLKLAGPQLV 253
+ FLK+ ++
Sbjct: 198 DANFLKVVSSAII 210
Score = 48.4 bits (110), Expect = 4e-06
Identities = 23/64 (35%), Positives = 38/64 (59%)
Frame = +3
Query: 498 PCPARSGRLDRKIEFPHPNEEARARIMQIHSRKMNVSPDVNFEELSRSTDDFQWAPSGKA 677
P R GRLDRKIE P PNE++R I++IH+ + ++++E + + + F A +
Sbjct: 293 PALLRPGRLDRKIEIPLPNEQSRMDILKIHAAGIAKHGEIDYEAIVKLAEGFNGADL-RN 351
Query: 678 VCVE 689
+C E
Sbjct: 352 ICTE 355
>At1g45000.1 68414.m05158 26S proteasome regulatory complex subunit
p42D, putative similar to 26S proteasome regulatory
complex subunit p42D [Drosophila melanogaster]
gi|6434958|gb|AAF08391
Length = 399
Score = 107 bits (256), Expect = 9e-24
Identities = 47/83 (56%), Positives = 63/83 (75%)
Frame = +1
Query: 259 FIGDGAKLVRDAFALAKEKAPAIIFIDELDAIGTKRFDSEKAGDREVQRTMLELLNQLDG 438
+IG+ A+L+R+ F A+E P IIF+DE+DAIG +RF + DRE+QRT++ELLNQLDG
Sbjct: 213 YIGESARLIREMFNYAREHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQLDG 272
Query: 439 FSSTADIKVIAATNRVDILDPAL 507
F +K+I ATNR D+LDPAL
Sbjct: 273 FDQLGKVKMIMATNRPDVLDPAL 295
Score = 90.6 bits (215), Expect = 8e-19
Identities = 41/73 (56%), Positives = 54/73 (73%)
Frame = +2
Query: 35 YSDIGGLDKQIQELIEAVVLPMTHKEKFVNLGIHPPKGVLLYGPPGTGKTLLARACAAQT 214
YS +GGL QI+EL E++ LP+ + E F+ +GI PPKGVLLYGPPGTGKTLLARA A+
Sbjct: 138 YSAVGGLGDQIRELRESIELPLMNPELFLRVGIKPPKGVLLYGPPGTGKTLLARAIASNI 197
Query: 215 KSTFLKLAGPQLV 253
+ FLK+ ++
Sbjct: 198 DANFLKVVSSAII 210
Score = 48.4 bits (110), Expect = 4e-06
Identities = 23/64 (35%), Positives = 38/64 (59%)
Frame = +3
Query: 498 PCPARSGRLDRKIEFPHPNEEARARIMQIHSRKMNVSPDVNFEELSRSTDDFQWAPSGKA 677
P R GRLDRKIE P PNE++R I++IH+ + ++++E + + + F A +
Sbjct: 293 PALLRPGRLDRKIEIPLPNEQSRMEILKIHASGIAKHGEIDYEAIVKLGEGFNGADL-RN 351
Query: 678 VCVE 689
+C E
Sbjct: 352 ICTE 355
>At1g53780.1 68414.m06120 26S proteasome AAA-ATPase subunit,
putative similar to 26S proteasome AAA-ATPase subunit
RPT1 SP:Q41365 from [Spinacia oleracea]
Length = 464
Score = 106 bits (255), Expect = 1e-23
Identities = 52/98 (53%), Positives = 66/98 (67%)
Frame = +1
Query: 259 FIGDGAKLVRDAFALAKEKAPAIIFIDELDAIGTKRFDSEKAGDREVQRTMLELLNQLDG 438
+IG+GA++VR+ F +A+ K I+F DE+DAIG RFD D EVQRTMLE+L QLDG
Sbjct: 279 YIGEGARMVRELFQMARSKKACILFFDEIDAIGGARFDDGVGSDNEVQRTMLEILYQLDG 338
Query: 439 FSSTADIKVIAATNRVDILDPALPDLDVWTEKSNFLIP 552
F + +IKV+ ATNR DILDPAL K F +P
Sbjct: 339 FDARGNIKVLMATNRPDILDPALLRPGRLDRKVEFCLP 376
Score = 106 bits (254), Expect = 2e-23
Identities = 48/82 (58%), Positives = 63/82 (76%)
Frame = +2
Query: 11 VDERPTEQYSDIGGLDKQIQELIEAVVLPMTHKEKFVNLGIHPPKGVLLYGPPGTGKTLL 190
V+E+P YSDIGG +QI+++ E V LPM H EKFV LGI PPKGVL YGPPG+GKTL+
Sbjct: 196 VEEKPDATYSDIGGCKEQIEKIREVVELPMLHPEKFVRLGIDPPKGVLCYGPPGSGKTLV 255
Query: 191 ARACAAQTKSTFLKLAGPQLVR 256
ARA A +T + F+++ G +LV+
Sbjct: 256 ARAVANRTGACFIRVVGSELVQ 277
Score = 49.6 bits (113), Expect = 2e-06
Identities = 26/64 (40%), Positives = 38/64 (59%)
Frame = +3
Query: 498 PCPARSGRLDRKIEFPHPNEEARARIMQIHSRKMNVSPDVNFEELSRSTDDFQWAPSGKA 677
P R GRLDRK+EF P+ E R +I +IH+R M+ D+ FE L+ + A ++
Sbjct: 359 PALLRPGRLDRKVEFCLPDLEGRTQIFKIHTRTMSCERDIRFELLAGLCPNSTGADI-RS 417
Query: 678 VCVE 689
VC+E
Sbjct: 418 VCIE 421
>At2g30950.1 68415.m03775 FtsH protease (VAR2) identical to zinc
dependent protease VAR2 GI:7650138 from [Arabidopsis
thaliana]
Length = 695
Score = 91.5 bits (217), Expect = 5e-19
Identities = 45/97 (46%), Positives = 60/97 (61%)
Frame = +1
Query: 217 VYIFEAGWSTTCAMFIGDGAKLVRDAFALAKEKAPAIIFIDELDAIGTKRFDSEKAGDRE 396
V F S MF+G GA VRD F AKE AP I+F+DE+DA+G +R G+ E
Sbjct: 286 VPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVGRQRGTGIGGGNDE 345
Query: 397 VQRTMLELLNQLDGFSSTADIKVIAATNRVDILDPAL 507
++T+ +LL ++DGF + V+AATNR DILD AL
Sbjct: 346 REQTLNQLLTEMDGFEGNTGVIVVAATNRADILDSAL 382
Score = 65.3 bits (152), Expect = 4e-11
Identities = 31/73 (42%), Positives = 45/73 (61%)
Frame = +2
Query: 35 YSDIGGLDKQIQELIEAVVLPMTHKEKFVNLGIHPPKGVLLYGPPGTGKTLLARACAAQT 214
+ D+ G+D+ Q+ +E V + E+F +G PKGVLL GPPGTGKTLLA+A A +
Sbjct: 226 FDDVAGVDEAKQDFMEVVEF-LKKPERFTAVGAKIPKGVLLIGPPGTGKTLLAKAIAGEA 284
Query: 215 KSTFLKLAGPQLV 253
F ++G + V
Sbjct: 285 GVPFFSISGSEFV 297
Score = 33.5 bits (73), Expect = 0.14
Identities = 15/51 (29%), Positives = 26/51 (50%)
Frame = +3
Query: 510 RSGRLDRKIEFPHPNEEARARIMQIHSRKMNVSPDVNFEELSRSTDDFQWA 662
R GR DR++ P+ + R I+++H+ DV+ E ++ T F A
Sbjct: 384 RPGRFDRQVSVDVPDVKGRTDILKVHAGNKKFDNDVSLEIIAMRTPGFSGA 434
>At1g06430.1 68414.m00680 FtsH protease, putative similar to zinc
dependent protease GI:7650138 from [Arabidopsis
thaliana]
Length = 685
Score = 91.5 bits (217), Expect = 5e-19
Identities = 45/97 (46%), Positives = 60/97 (61%)
Frame = +1
Query: 217 VYIFEAGWSTTCAMFIGDGAKLVRDAFALAKEKAPAIIFIDELDAIGTKRFDSEKAGDRE 396
V F S MF+G GA VRD F AKE AP I+F+DE+DA+G +R G+ E
Sbjct: 279 VPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVGRQRGTGIGGGNDE 338
Query: 397 VQRTMLELLNQLDGFSSTADIKVIAATNRVDILDPAL 507
++T+ +LL ++DGF + V+AATNR DILD AL
Sbjct: 339 REQTLNQLLTEMDGFEGNTGVIVVAATNRADILDSAL 375
Score = 65.7 bits (153), Expect = 3e-11
Identities = 31/73 (42%), Positives = 45/73 (61%)
Frame = +2
Query: 35 YSDIGGLDKQIQELIEAVVLPMTHKEKFVNLGIHPPKGVLLYGPPGTGKTLLARACAAQT 214
+ D+ G+D+ Q+ +E V + E+F +G PKGVLL GPPGTGKTLLA+A A +
Sbjct: 219 FDDVAGVDEAKQDFMEVVEF-LKKPERFTAVGARIPKGVLLVGPPGTGKTLLAKAIAGEA 277
Query: 215 KSTFLKLAGPQLV 253
F ++G + V
Sbjct: 278 GVPFFSISGSEFV 290
Score = 32.7 bits (71), Expect = 0.24
Identities = 15/51 (29%), Positives = 25/51 (49%)
Frame = +3
Query: 510 RSGRLDRKIEFPHPNEEARARIMQIHSRKMNVSPDVNFEELSRSTDDFQWA 662
R GR DR++ P+ + R I+++HS V+ E ++ T F A
Sbjct: 377 RPGRFDRQVSVDVPDVKGRTDILKVHSGNKKFESGVSLEVIAMRTPGFSGA 427
>At5g42270.1 68418.m05145 FtsH protease, putative similar to FtsH
protease GI:13183728 from [Medicago sativa]
Length = 704
Score = 90.6 bits (215), Expect = 8e-19
Identities = 45/97 (46%), Positives = 62/97 (63%)
Frame = +1
Query: 217 VYIFEAGWSTTCAMFIGDGAKLVRDAFALAKEKAPAIIFIDELDAIGTKRFDSEKAGDRE 396
V F S +F+G GA VRD F AK KAP I+FIDE+DA+G +R G+ E
Sbjct: 309 VPFFSCAASEFVELFVGVGASRVRDLFEKAKSKAPCIVFIDEIDAVGRQRGAGMGGGNDE 368
Query: 397 VQRTMLELLNQLDGFSSTADIKVIAATNRVDILDPAL 507
++T+ +LL ++DGFS + + V+AATNR D+LD AL
Sbjct: 369 REQTINQLLTEMDGFSGNSGVIVLAATNRPDVLDSAL 405
Score = 60.1 bits (139), Expect = 1e-09
Identities = 32/73 (43%), Positives = 41/73 (56%)
Frame = +2
Query: 35 YSDIGGLDKQIQELIEAVVLPMTHKEKFVNLGIHPPKGVLLYGPPGTGKTLLARACAAQT 214
+ D+ G D+ EL E V + + +K+ LG PKG LL GPPGTGKTLLARA A +
Sbjct: 249 FGDVAGADQAKLELQEVVDF-LKNPDKYTALGAKIPKGCLLVGPPGTGKTLLARAVAGEA 307
Query: 215 KSTFLKLAGPQLV 253
F A + V
Sbjct: 308 GVPFFSCAASEFV 320
Score = 43.6 bits (98), Expect = 1e-04
Identities = 18/51 (35%), Positives = 31/51 (60%)
Frame = +3
Query: 510 RSGRLDRKIEFPHPNEEARARIMQIHSRKMNVSPDVNFEELSRSTDDFQWA 662
R GR DR++ P+ R +I+++HSR + DV++E+++R T F A
Sbjct: 407 RPGRFDRQVTVDRPDVAGRVQILKVHSRGKAIGKDVDYEKVARRTPGFTGA 457
>At1g50250.1 68414.m05634 cell division protein ftsH homolog 1,
chloroplast (FTSH1) (FTSH) identical to SP:Q39102 Cell
division protein ftsH homolog 1, chloroplast
precursor (EC 3.4.24.-) [Arabidopsis thaliana]
Length = 716
Score = 90.6 bits (215), Expect = 8e-19
Identities = 45/97 (46%), Positives = 62/97 (63%)
Frame = +1
Query: 217 VYIFEAGWSTTCAMFIGDGAKLVRDAFALAKEKAPAIIFIDELDAIGTKRFDSEKAGDRE 396
V F S +F+G GA VRD F AK KAP I+FIDE+DA+G +R G+ E
Sbjct: 321 VPFFSCAASEFVELFVGVGASRVRDLFEKAKSKAPCIVFIDEIDAVGRQRGAGMGGGNDE 380
Query: 397 VQRTMLELLNQLDGFSSTADIKVIAATNRVDILDPAL 507
++T+ +LL ++DGFS + + V+AATNR D+LD AL
Sbjct: 381 REQTINQLLTEMDGFSGNSGVIVLAATNRPDVLDSAL 417
Score = 60.5 bits (140), Expect = 1e-09
Identities = 32/73 (43%), Positives = 42/73 (57%)
Frame = +2
Query: 35 YSDIGGLDKQIQELIEAVVLPMTHKEKFVNLGIHPPKGVLLYGPPGTGKTLLARACAAQT 214
++D+ G D+ EL E V + + +K+ LG PKG LL GPPGTGKTLLARA A +
Sbjct: 261 FADVAGADQAKLELQEVVDF-LKNPDKYTALGAKIPKGCLLVGPPGTGKTLLARAVAGEA 319
Query: 215 KSTFLKLAGPQLV 253
F A + V
Sbjct: 320 GVPFFSCAASEFV 332
Score = 44.8 bits (101), Expect = 6e-05
Identities = 19/51 (37%), Positives = 31/51 (60%)
Frame = +3
Query: 510 RSGRLDRKIEFPHPNEEARARIMQIHSRKMNVSPDVNFEELSRSTDDFQWA 662
R GR DR++ P+ R +I+Q+HSR + DV+F++++R T F A
Sbjct: 419 RPGRFDRQVTVDRPDVAGRVKILQVHSRGKALGKDVDFDKVARRTPGFTGA 469
>At5g03340.1 68418.m00286 cell division cycle protein 48, putative /
CDC48, putative very strong similarity to SP|P54609 Cell
division cycle protein 48 homolog {Arabidopsis
thaliana}; contains Pfam profiles PF00004: ATPase AAA
family, PF02359: Cell division protein 48 (CDC48)
N-terminal domain; supporting cDNA
gi|26449351|dbj|AK117125.1|
Length = 810
Score = 89.0 bits (211), Expect = 3e-18
Identities = 39/84 (46%), Positives = 60/84 (71%), Gaps = 2/84 (2%)
Frame = +2
Query: 8 RVDERPTEQ--YSDIGGLDKQIQELIEAVVLPMTHKEKFVNLGIHPPKGVLLYGPPGTGK 181
R DE ++ Y D+GG+ KQ+ ++ E V LP+ H + F ++G+ PPKG+LLYGPPG+GK
Sbjct: 195 REDEERLDEVGYDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVKPPKGILLYGPPGSGK 254
Query: 182 TLLARACAAQTKSTFLKLAGPQLV 253
TL+ARA A +T + F + GP+++
Sbjct: 255 TLIARAVANETGAFFFCINGPEIM 278
Score = 85.8 bits (203), Expect = 2e-17
Identities = 40/81 (49%), Positives = 53/81 (65%)
Frame = +2
Query: 11 VDERPTEQYSDIGGLDKQIQELIEAVVLPMTHKEKFVNLGIHPPKGVLLYGPPGTGKTLL 190
V E P + DIGGL+ +EL E V P+ H EKF G+ P KGVL YGPPG GKTLL
Sbjct: 471 VVEVPNVSWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLL 530
Query: 191 ARACAAQTKSTFLKLAGPQLV 253
A+A A + ++ F+ + GP+L+
Sbjct: 531 AKAIANECQANFISVKGPELL 551
Score = 68.5 bits (160), Expect = 4e-12
Identities = 32/84 (38%), Positives = 51/84 (60%)
Frame = +1
Query: 256 MFIGDGAKLVRDAFALAKEKAPAIIFIDELDAIGTKRFDSEKAGDREVQRTMLELLNQLD 435
M+ G+ VR+ F A++ AP ++F DELD+I T+R +S R + +LL ++D
Sbjct: 553 MWFGESEANVREIFDKARQSAPCVLFFDELDSIATQRGNSAGDAGGAADRVLNQLLTEMD 612
Query: 436 GFSSTADIKVIAATNRVDILDPAL 507
G ++ + +I ATNR DI+D AL
Sbjct: 613 GMNAKKTVFIIGATNRPDIIDSAL 636
Score = 64.9 bits (151), Expect = 5e-11
Identities = 35/81 (43%), Positives = 50/81 (61%)
Frame = +1
Query: 265 GDGAKLVRDAFALAKEKAPAIIFIDELDAIGTKRFDSEKAGDREVQRTMLELLNQLDGFS 444
G+ +R AF A++ AP+IIFIDE+D+I KR EK +R + +LL +DG
Sbjct: 283 GESESNLRKAFEEAEKNAPSIIFIDEIDSIAPKR---EKTNGEVERRIVSQLLTLMDGLK 339
Query: 445 STADIKVIAATNRVDILDPAL 507
S A + V+ ATNR + +DPAL
Sbjct: 340 SRAHVIVMGATNRPNSIDPAL 360
Score = 46.8 bits (106), Expect = 1e-05
Identities = 22/64 (34%), Positives = 37/64 (57%)
Frame = +3
Query: 498 PCPARSGRLDRKIEFPHPNEEARARIMQIHSRKMNVSPDVNFEELSRSTDDFQWAPSGKA 677
P R GR DR+I+ P+E R +++IH++ M ++ DV+ E +S+ T + A A
Sbjct: 358 PALRRFGRFDREIDIGVPDEIGRLEVLRIHTKNMKLAEDVDLERISKDTHGYVGADLA-A 416
Query: 678 VCVE 689
+C E
Sbjct: 417 LCTE 420
Score = 38.3 bits (85), Expect = 0.005
Identities = 20/51 (39%), Positives = 29/51 (56%)
Frame = +3
Query: 510 RSGRLDRKIEFPHPNEEARARIMQIHSRKMNVSPDVNFEELSRSTDDFQWA 662
R GRLD+ I P P+E++R I + RK V+ DV+ L++ T F A
Sbjct: 638 RPGRLDQLIYIPLPDEDSRLNIFKACLRKSPVAKDVDVTALAKYTQGFSGA 688
>At3g53230.1 68416.m05865 cell division cycle protein 48, putative /
CDC48, putative very strong similarity to SP|P54609 Cell
division cycle protein 48 homolog {Arabidopsis
thaliana}; contains Pfam profiles PF00004: ATPase AAA
family, PF02359: Cell division protein 48 (CDC48)
N-terminal domain
Length = 815
Score = 89.0 bits (211), Expect = 3e-18
Identities = 39/84 (46%), Positives = 60/84 (71%), Gaps = 2/84 (2%)
Frame = +2
Query: 8 RVDERPTEQ--YSDIGGLDKQIQELIEAVVLPMTHKEKFVNLGIHPPKGVLLYGPPGTGK 181
R DE ++ Y D+GG+ KQ+ ++ E V LP+ H + F ++G+ PPKG+LLYGPPG+GK
Sbjct: 196 REDEERLDEVGYDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVKPPKGILLYGPPGSGK 255
Query: 182 TLLARACAAQTKSTFLKLAGPQLV 253
TL+ARA A +T + F + GP+++
Sbjct: 256 TLIARAVANETGAFFFCINGPEIM 279
Score = 86.2 bits (204), Expect = 2e-17
Identities = 40/81 (49%), Positives = 53/81 (65%)
Frame = +2
Query: 11 VDERPTEQYSDIGGLDKQIQELIEAVVLPMTHKEKFVNLGIHPPKGVLLYGPPGTGKTLL 190
V E P + DIGGL+ +EL E V P+ H EKF G+ P KGVL YGPPG GKTLL
Sbjct: 472 VVEVPNVSWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLL 531
Query: 191 ARACAAQTKSTFLKLAGPQLV 253
A+A A + ++ F+ + GP+L+
Sbjct: 532 AKAIANECQANFISIKGPELL 552
Score = 71.3 bits (167), Expect = 6e-13
Identities = 33/84 (39%), Positives = 52/84 (61%)
Frame = +1
Query: 256 MFIGDGAKLVRDAFALAKEKAPAIIFIDELDAIGTKRFDSEKAGDREVQRTMLELLNQLD 435
M+ G+ VR+ F A++ AP ++F DELD+I T+R +S R + +LL ++D
Sbjct: 554 MWFGESEANVREIFDKARQSAPCVLFFDELDSIATQRGNSVGDAGGAADRVLNQLLTEMD 613
Query: 436 GFSSTADIKVIAATNRVDILDPAL 507
G ++ + +I ATNR DI+DPAL
Sbjct: 614 GMNAKKTVFIIGATNRPDIIDPAL 637
Score = 64.1 bits (149), Expect = 8e-11
Identities = 35/81 (43%), Positives = 50/81 (61%)
Frame = +1
Query: 265 GDGAKLVRDAFALAKEKAPAIIFIDELDAIGTKRFDSEKAGDREVQRTMLELLNQLDGFS 444
G+ +R AF A++ AP+IIFIDE+D+I KR EK +R + +LL +DG
Sbjct: 284 GESESNLRKAFEEAEKNAPSIIFIDEIDSIAPKR---EKTHGEVERRIVSQLLTLMDGLK 340
Query: 445 STADIKVIAATNRVDILDPAL 507
S A + V+ ATNR + +DPAL
Sbjct: 341 SRAHVIVMGATNRPNSIDPAL 361
Score = 46.4 bits (105), Expect = 2e-05
Identities = 22/64 (34%), Positives = 37/64 (57%)
Frame = +3
Query: 498 PCPARSGRLDRKIEFPHPNEEARARIMQIHSRKMNVSPDVNFEELSRSTDDFQWAPSGKA 677
P R GR DR+I+ P+E R +++IH++ M ++ DV+ E +S+ T + A A
Sbjct: 359 PALRRFGRFDREIDIGVPDEIGRLEVLRIHTKNMKLAEDVDLERVSKDTHGYVGADLA-A 417
Query: 678 VCVE 689
+C E
Sbjct: 418 LCTE 421
Score = 41.1 bits (92), Expect = 7e-04
Identities = 22/55 (40%), Positives = 31/55 (56%)
Frame = +3
Query: 498 PCPARSGRLDRKIEFPHPNEEARARIMQIHSRKMNVSPDVNFEELSRSTDDFQWA 662
P R GRLD+ I P P+EE+R +I + RK V+ DV+ L++ T F A
Sbjct: 635 PALLRPGRLDQLIYIPLPDEESRYQIFKSCLRKSPVAKDVDLRALAKYTQGFSGA 689
>At3g09840.1 68416.m01174 cell division cycle protein 48 (CDC48A)
(CDC48) identical to SP|P54609 Cell division cycle
protein 48 homolog {Arabidopsis thaliana}
Length = 809
Score = 88.2 bits (209), Expect = 5e-18
Identities = 36/73 (49%), Positives = 55/73 (75%)
Frame = +2
Query: 35 YSDIGGLDKQIQELIEAVVLPMTHKEKFVNLGIHPPKGVLLYGPPGTGKTLLARACAAQT 214
Y D+GG+ KQ+ ++ E V LP+ H + F ++G+ PPKG+LLYGPPG+GKTL+ARA A +T
Sbjct: 206 YDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVKPPKGILLYGPPGSGKTLIARAVANET 265
Query: 215 KSTFLKLAGPQLV 253
+ F + GP+++
Sbjct: 266 GAFFFCINGPEIM 278
Score = 86.2 bits (204), Expect = 2e-17
Identities = 40/81 (49%), Positives = 54/81 (66%)
Frame = +2
Query: 11 VDERPTEQYSDIGGLDKQIQELIEAVVLPMTHKEKFVNLGIHPPKGVLLYGPPGTGKTLL 190
V E P ++DIGGL+ +EL E V P+ H EKF G+ P KGVL YGPPG GKTLL
Sbjct: 471 VVEVPNVSWNDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLL 530
Query: 191 ARACAAQTKSTFLKLAGPQLV 253
A+A A + ++ F+ + GP+L+
Sbjct: 531 AKAIANECQANFISVKGPELL 551
Score = 65.3 bits (152), Expect = 4e-11
Identities = 33/85 (38%), Positives = 51/85 (60%), Gaps = 1/85 (1%)
Frame = +1
Query: 256 MFIGDGAKLVRDAFALAKEKAPAIIFIDELDAIGTKR-FDSEKAGDREVQRTMLELLNQL 432
M+ G+ VR+ F A++ AP ++F DELD+I T+R S G R + +LL ++
Sbjct: 553 MWFGESEANVREIFDKARQSAPCVLFFDELDSIATQRGGGSGGDGGGAADRVLNQLLTEM 612
Query: 433 DGFSSTADIKVIAATNRVDILDPAL 507
DG ++ + +I ATNR DI+D AL
Sbjct: 613 DGMNAKKTVFIIGATNRPDIIDSAL 637
Score = 64.9 bits (151), Expect = 5e-11
Identities = 35/81 (43%), Positives = 50/81 (61%)
Frame = +1
Query: 265 GDGAKLVRDAFALAKEKAPAIIFIDELDAIGTKRFDSEKAGDREVQRTMLELLNQLDGFS 444
G+ +R AF A++ AP+IIFIDE+D+I KR EK +R + +LL +DG
Sbjct: 283 GESESNLRKAFEEAEKNAPSIIFIDEIDSIAPKR---EKTNGEVERRIVSQLLTLMDGLK 339
Query: 445 STADIKVIAATNRVDILDPAL 507
S A + V+ ATNR + +DPAL
Sbjct: 340 SRAHVIVMGATNRPNSIDPAL 360
Score = 46.8 bits (106), Expect = 1e-05
Identities = 22/64 (34%), Positives = 37/64 (57%)
Frame = +3
Query: 498 PCPARSGRLDRKIEFPHPNEEARARIMQIHSRKMNVSPDVNFEELSRSTDDFQWAPSGKA 677
P R GR DR+I+ P+E R +++IH++ M ++ DV+ E +S+ T + A A
Sbjct: 358 PALRRFGRFDREIDIGVPDEIGRLEVLRIHTKNMKLAEDVDLERISKDTHGYVGADLA-A 416
Query: 678 VCVE 689
+C E
Sbjct: 417 LCTE 420
Score = 38.3 bits (85), Expect = 0.005
Identities = 19/51 (37%), Positives = 29/51 (56%)
Frame = +3
Query: 510 RSGRLDRKIEFPHPNEEARARIMQIHSRKMNVSPDVNFEELSRSTDDFQWA 662
R GRLD+ I P P+E++R I + RK ++ DV+ L++ T F A
Sbjct: 639 RPGRLDQLIYIPLPDEDSRLNIFKAALRKSPIAKDVDIGALAKYTQGFSGA 689
>At3g47060.1 68416.m05110 FtsH protease, putative contains
similarity to FtsH protease GI:13183728 from [Medicago
sativa]
Length = 802
Score = 86.6 bits (205), Expect = 1e-17
Identities = 41/85 (48%), Positives = 60/85 (70%), Gaps = 1/85 (1%)
Frame = +1
Query: 256 MFIGDGAKLVRDAFALAKEKAPAIIFIDELDAIGTKRFDSEKAGDR-EVQRTMLELLNQL 432
+++G GA VRD FA AK++AP+IIFIDE+DA+ R + G E ++T+ +LL ++
Sbjct: 397 LYVGMGASRVRDLFARAKKEAPSIIFIDEIDAVAKSRDGKFRMGSNDEREQTLNQLLTEM 456
Query: 433 DGFSSTADIKVIAATNRVDILDPAL 507
DGF S + + V+ ATNR D+LDPAL
Sbjct: 457 DGFDSNSAVIVLGATNRADVLDPAL 481
Score = 68.1 bits (159), Expect = 5e-12
Identities = 33/76 (43%), Positives = 50/76 (65%)
Frame = +2
Query: 26 TEQYSDIGGLDKQIQELIEAVVLPMTHKEKFVNLGIHPPKGVLLYGPPGTGKTLLARACA 205
T ++D+ G+D+ +EL E +V + + EK+V LG PP+GVLL G PGTGKTLLA+A A
Sbjct: 321 TITFADVAGVDEAKEEL-EEIVEFLRNPEKYVRLGARPPRGVLLVGLPGTGKTLLAKAVA 379
Query: 206 AQTKSTFLKLAGPQLV 253
+ + F+ + + V
Sbjct: 380 GEAEVPFISCSASEFV 395
>At5g64580.1 68418.m08116 AAA-type ATPase family protein similar to
zinc dependent protease [Arabidopsis thaliana]
GI:7650138; contains Pfam profile PF00004: ATPase AAA
family
Length = 855
Score = 86.2 bits (204), Expect = 2e-17
Identities = 45/96 (46%), Positives = 65/96 (67%), Gaps = 2/96 (2%)
Frame = +1
Query: 226 FEAGWSTTCAMFIGDGAKLVRDAFALAKEKAPAIIFIDELDAIGTKRFDSE-KAGDREVQ 402
F A + MF+G A V+D FA ++ AP+IIFIDE+DAIG+KR + G E +
Sbjct: 378 FAANGTDFVEMFVGVAASRVKDLFASSRSYAPSIIFIDEIDAIGSKRGGPDIGGGGAERE 437
Query: 403 RTMLELLNQLDGFS-STADIKVIAATNRVDILDPAL 507
+ +L++L ++DGF +T+ + VI ATNR+DILDPAL
Sbjct: 438 QGLLQILTEMDGFKVTTSQVLVIGATNRLDILDPAL 473
Score = 62.9 bits (146), Expect = 2e-10
Identities = 32/80 (40%), Positives = 47/80 (58%)
Frame = +2
Query: 14 DERPTEQYSDIGGLDKQIQELIEAVVLPMTHKEKFVNLGIHPPKGVLLYGPPGTGKTLLA 193
+E+ + D G + I+ ++ +V + + E+F N GI+ PKGVLL+GPPGTGKTLLA
Sbjct: 308 EEKTGVTFDDFAG-QEYIKRELQEIVRILKNDEEFQNKGIYCPKGVLLHGPPGTGKTLLA 366
Query: 194 RACAAQTKSTFLKLAGPQLV 253
+A A + F G V
Sbjct: 367 KAIAGEAGLPFFAANGTDFV 386
Score = 32.3 bits (70), Expect = 0.31
Identities = 19/59 (32%), Positives = 32/59 (54%), Gaps = 4/59 (6%)
Frame = +3
Query: 498 PCPARSGRLDRKIEFPHPNEEARARIMQIHSR-KMNVSPDVN---FEELSRSTDDFQWA 662
P R GR D+ I P+++ R I+++H+R K S D +E++ +T+DF A
Sbjct: 471 PALLRKGRFDKIIRVGLPSKDGRLAILKVHARNKFFRSEDEKEELLQEVAENTEDFTGA 529
>At5g58870.1 68418.m07376 FtsH protease, putative contains
similarity to cell division protein FtsH homolog 3
SP:P73437 (EC 3.4.24.-) [strain PCC6803] {Synechocystis
sp.}
Length = 806
Score = 84.6 bits (200), Expect = 6e-17
Identities = 40/85 (47%), Positives = 60/85 (70%), Gaps = 1/85 (1%)
Frame = +1
Query: 256 MFIGDGAKLVRDAFALAKEKAPAIIFIDELDAIGTKRFDS-EKAGDREVQRTMLELLNQL 432
+++G GA VRD FA AK++AP+IIFIDE+DA+ R + E ++T+ +LL ++
Sbjct: 401 LYVGMGASRVRDLFARAKKEAPSIIFIDEIDAVAKSRDGKFRMVSNDEREQTLNQLLTEM 460
Query: 433 DGFSSTADIKVIAATNRVDILDPAL 507
DGF S++ + V+ ATNR D+LDPAL
Sbjct: 461 DGFDSSSAVIVLGATNRADVLDPAL 485
Score = 65.3 bits (152), Expect = 4e-11
Identities = 31/76 (40%), Positives = 50/76 (65%)
Frame = +2
Query: 26 TEQYSDIGGLDKQIQELIEAVVLPMTHKEKFVNLGIHPPKGVLLYGPPGTGKTLLARACA 205
T ++D+ G+D+ +EL E +V + + +++V LG PP+GVLL G PGTGKTLLA+A A
Sbjct: 325 TITFADVAGVDEAKEEL-EEIVEFLKNPDRYVRLGARPPRGVLLVGLPGTGKTLLAKAVA 383
Query: 206 AQTKSTFLKLAGPQLV 253
++ F+ + + V
Sbjct: 384 GESDVPFISCSASEFV 399
>At5g53170.1 68418.m06610 FtsH protease, putative similar to
ATP-dependent metalloprotease FtsH1 GI:3600100 from [Mus
musculus]
Length = 806
Score = 83.0 bits (196), Expect = 2e-16
Identities = 46/96 (47%), Positives = 62/96 (64%)
Frame = +1
Query: 220 YIFEAGWSTTCAMFIGDGAKLVRDAFALAKEKAPAIIFIDELDAIGTKRFDSEKAGDREV 399
+ + AG S MF+G GA+ VR F AK+KAP IIFIDE+DA+G+ R K +
Sbjct: 423 FFYRAG-SEFEEMFVGVGARRVRSLFQAAKKKAPCIIFIDEIDAVGSTR----KQWEGHT 477
Query: 400 QRTMLELLNQLDGFSSTADIKVIAATNRVDILDPAL 507
++T+ +LL ++DGF I V+AATN DILDPAL
Sbjct: 478 KKTLHQLLVEMDGFEQNEGIIVMAATNLPDILDPAL 513
Score = 60.9 bits (141), Expect = 8e-10
Identities = 34/77 (44%), Positives = 44/77 (57%)
Frame = +2
Query: 17 ERPTEQYSDIGGLDKQIQELIEAVVLPMTHKEKFVNLGIHPPKGVLLYGPPGTGKTLLAR 196
E+ + + D+ G D QEL E VV + + KF LG PKG+LL G PGTGKTLLA+
Sbjct: 355 EKNVKTFKDVKGCDDAKQEL-EEVVEYLKNPSKFTRLGGKLPKGILLTGAPGTGKTLLAK 413
Query: 197 ACAAQTKSTFLKLAGPQ 247
A A + F AG +
Sbjct: 414 AIAGEAGVPFFYRAGSE 430
>At5g15250.1 68418.m01786 FtsH protease, putative similar to
FtsH-like protein Pftf precursor GI:4325041 from
[Nicotiana tabacum]
Length = 687
Score = 83.0 bits (196), Expect = 2e-16
Identities = 42/97 (43%), Positives = 58/97 (59%)
Frame = +1
Query: 217 VYIFEAGWSTTCAMFIGDGAKLVRDAFALAKEKAPAIIFIDELDAIGTKRFDSEKAGDRE 396
V F S MF+G GA RD F AK +P I+FIDE+DA+G R G+ E
Sbjct: 282 VPFFSLSGSEFIEMFVGVGASRARDLFNKAKANSPCIVFIDEIDAVGRMRGTGIGGGNDE 341
Query: 397 VQRTMLELLNQLDGFSSTADIKVIAATNRVDILDPAL 507
++T+ ++L ++DGF+ + VIAATNR +ILD AL
Sbjct: 342 REQTLNQILTEMDGFAGNTGVIVIAATNRPEILDSAL 378
Score = 65.3 bits (152), Expect = 4e-11
Identities = 34/73 (46%), Positives = 44/73 (60%)
Frame = +2
Query: 35 YSDIGGLDKQIQELIEAVVLPMTHKEKFVNLGIHPPKGVLLYGPPGTGKTLLARACAAQT 214
+ D+ G+D+ Q+ E V T EKF LG PKGVLL GPPGTGKTLLA+A A +
Sbjct: 222 FEDVAGVDEAKQDFEEIVEFLKT-PEKFSALGAKIPKGVLLTGPPGTGKTLLAKAIAGEA 280
Query: 215 KSTFLKLAGPQLV 253
F L+G + +
Sbjct: 281 GVPFFSLSGSEFI 293
Score = 36.3 bits (80), Expect = 0.019
Identities = 16/51 (31%), Positives = 26/51 (50%)
Frame = +3
Query: 510 RSGRLDRKIEFPHPNEEARARIMQIHSRKMNVSPDVNFEELSRSTDDFQWA 662
R GR DR++ P+ R I+++HSR + DV+ ++ T F A
Sbjct: 380 RPGRFDRQVSVGLPDIRGREEILKVHSRSKKLDKDVSLSVIAMRTPGFSGA 430
>At2g29080.1 68415.m03535 FtsH protease, putative similar to
AAA-metalloprotease FtsH [Pisum sativum] GI:15021761;
contains Pfam profiles PF01434: Peptidase family M41,
PF00004: ATPase AAA family
Length = 809
Score = 82.6 bits (195), Expect = 2e-16
Identities = 42/84 (50%), Positives = 56/84 (66%)
Frame = +1
Query: 256 MFIGDGAKLVRDAFALAKEKAPAIIFIDELDAIGTKRFDSEKAGDREVQRTMLELLNQLD 435
MF+G G VR F A++ AP+IIFIDE+DAIG R G+ E + T+ +LL ++D
Sbjct: 394 MFVGVGPSRVRHLFQEARQAAPSIIFIDEIDAIGRARGRGGLGGNDERESTLNQLLVEMD 453
Query: 436 GFSSTADIKVIAATNRVDILDPAL 507
GF +TA + V+A TNR DILD AL
Sbjct: 454 GFGTTAGVVVLAGTNRPDILDKAL 477
Score = 67.3 bits (157), Expect = 9e-12
Identities = 36/94 (38%), Positives = 56/94 (59%), Gaps = 2/94 (2%)
Frame = +2
Query: 5 TRVDERPTEQ--YSDIGGLDKQIQELIEAVVLPMTHKEKFVNLGIHPPKGVLLYGPPGTG 178
TR D+ + + D+ G D+ QE++E V + + +K+ +LG PKG LL GPPGTG
Sbjct: 309 TRADKHSKNKIYFKDVAGCDEAKQEIMEFVHF-LKNPKKYEDLGAKIPKGALLVGPPGTG 367
Query: 179 KTLLARACAAQTKSTFLKLAGPQLVRCSLVMVPS 280
KTLLA+A A ++ FL ++G + + + PS
Sbjct: 368 KTLLAKATAGESGVPFLSISGSDFMEMFVGVGPS 401
>At3g16290.1 68416.m02056 FtsH protease, putative contains
similarity to cell division protein FtsH GI:1652085 from
[Synechocystis sp. PCC 6803]
Length = 876
Score = 82.2 bits (194), Expect = 3e-16
Identities = 42/97 (43%), Positives = 60/97 (61%)
Frame = +1
Query: 217 VYIFEAGWSTTCAMFIGDGAKLVRDAFALAKEKAPAIIFIDELDAIGTKRFDSEKAGDRE 396
V F S +++G GA VR + A+E AP+++FIDELDA+G +R + +G +E
Sbjct: 469 VNFFSISASQFVEIYVGVGASRVRALYQEARENAPSVVFIDELDAVGRERGLIKGSGGQE 528
Query: 397 VQRTMLELLNQLDGFSSTADIKVIAATNRVDILDPAL 507
T+ +LL LDGF ++ IA+TNR DILDPAL
Sbjct: 529 RDATLNQLLVSLDGFEGRGEVITIASTNRPDILDPAL 565
Score = 60.1 bits (139), Expect = 1e-09
Identities = 31/74 (41%), Positives = 43/74 (58%)
Frame = +2
Query: 32 QYSDIGGLDKQIQELIEAVVLPMTHKEKFVNLGIHPPKGVLLYGPPGTGKTLLARACAAQ 211
+++D+ GL K EL E +V TH E + G+ P G+LL GPPG GKTLLA+A A +
Sbjct: 408 KFTDVAGLGKIRLEL-EEIVKFFTHGEMYRRRGVKIPGGILLCGPPGVGKTLLAKAVAGE 466
Query: 212 TKSTFLKLAGPQLV 253
F ++ Q V
Sbjct: 467 AGVNFFSISASQFV 480
Score = 43.2 bits (97), Expect = 2e-04
Identities = 19/50 (38%), Positives = 29/50 (58%)
Frame = +3
Query: 498 PCPARSGRLDRKIEFPHPNEEARARIMQIHSRKMNVSPDVNFEELSRSTD 647
P R GR DRKI P P R I+Q+H+RK ++ D+++ ++ TD
Sbjct: 563 PALVRPGRFDRKIFIPKPGLIGRMEILQVHARKKPMAEDLDYMAVASMTD 612
>At3g56690.1 68416.m06306 calmodulin-binding protein identical to
calmodulin-binding protein GI:6760428 from [Arabidopsis
thaliana]
Length = 1022
Score = 80.6 bits (190), Expect = 9e-16
Identities = 34/78 (43%), Positives = 51/78 (65%)
Frame = +2
Query: 17 ERPTEQYSDIGGLDKQIQELIEAVVLPMTHKEKFVNLGIHPPKGVLLYGPPGTGKTLLAR 196
E P + D+GG ++ +L+EAV P H++ F +G PP G+L++GPPG KTL+AR
Sbjct: 717 EVPKVNWEDVGGQNEVKNQLMEAVEWPQKHQDAFKRIGTRPPSGILMFGPPGCSKTLMAR 776
Query: 197 ACAAQTKSTFLKLAGPQL 250
A A++ K FL + GP+L
Sbjct: 777 AVASEAKLNFLAVKGPEL 794
Score = 70.5 bits (165), Expect = 1e-12
Identities = 37/97 (38%), Positives = 54/97 (55%)
Frame = +1
Query: 217 VYIFEAGWSTTCAMFIGDGAKLVRDAFALAKEKAPAIIFIDELDAIGTKRFDSEKAGDRE 396
V F + ++G+ K + + F A PA++FID+LDAI R ++ G+
Sbjct: 444 VNFFSVNGPEIISQYLGESEKALDEVFRSASNATPAVVFIDDLDAIAPAR---KEGGEEL 500
Query: 397 VQRTMLELLNQLDGFSSTADIKVIAATNRVDILDPAL 507
QR + LLN +DG S T + VIAATNR D ++PAL
Sbjct: 501 SQRMVATLLNLMDGISRTDGVVVIAATNRPDSIEPAL 537
Score = 66.9 bits (156), Expect = 1e-11
Identities = 36/83 (43%), Positives = 49/83 (59%)
Frame = +1
Query: 259 FIGDGAKLVRDAFALAKEKAPAIIFIDELDAIGTKRFDSEKAGDREVQRTMLELLNQLDG 438
++G+ K VR FA A+ AP+IIF DE+D++ + R E G R M +LL +LDG
Sbjct: 798 WVGESEKAVRSLFAKARANAPSIIFFDEIDSLASIR-GKENDGVSVSDRVMSQLLVELDG 856
Query: 439 FSSTADIKVIAATNRVDILDPAL 507
+ VIAATNR D +D AL
Sbjct: 857 LHQRVGVTVIAATNRPDKIDSAL 879
Score = 61.3 bits (142), Expect = 6e-10
Identities = 28/74 (37%), Positives = 45/74 (60%)
Frame = +2
Query: 32 QYSDIGGLDKQIQELIEAVVLPMTHKEKFVNLGIHPPKGVLLYGPPGTGKTLLARACAAQ 211
+ S +GGL K+ ++ ++ + K +LG+ P KGVL++GPPGTGKT LAR A
Sbjct: 383 EISKLGGLSKEYA-ILRDIIDSSSIKNSLSSLGLRPTKGVLIHGPPGTGKTSLARTFARH 441
Query: 212 TKSTFLKLAGPQLV 253
+ F + GP+++
Sbjct: 442 SGVNFFSVNGPEII 455
Score = 38.7 bits (86), Expect = 0.004
Identities = 20/51 (39%), Positives = 28/51 (54%)
Frame = +3
Query: 510 RSGRLDRKIEFPHPNEEARARIMQIHSRKMNVSPDVNFEELSRSTDDFQWA 662
R GR DR + PNE R I++IH RK+ S D+ +EL+ T + A
Sbjct: 881 RPGRFDRLLYVGPPNETDREAILKIHLRKIPCSSDICLKELASITKGYTGA 931
Score = 35.5 bits (78), Expect = 0.034
Identities = 24/65 (36%), Positives = 34/65 (52%), Gaps = 1/65 (1%)
Frame = +3
Query: 498 PCPARSGRLDRKIEFPHPNEEARARIMQIHSRKMNVS-PDVNFEELSRSTDDFQWAPSGK 674
P R GRLDR+IE P+ R+ I+ I R M S ++ E+L+ +T F A
Sbjct: 535 PALRRPGRLDREIEIGVPSSTQRSDILHIILRGMRHSLSNIQVEQLAMATHGFVGADL-S 593
Query: 675 AVCVE 689
A+C E
Sbjct: 594 ALCCE 598
>At3g02450.1 68416.m00232 cell division protein ftsH, putative
similar to SWISS-PROT:P46469 cell division protein ftsH
homolog [Lactococcus lactis]; contains Pfam domain,
PF00004: ATPase, AAA family ('A'TPases 'A'ssociated with
diverse cellular 'A'ctivities)
Length = 622
Score = 79.8 bits (188), Expect = 2e-15
Identities = 43/97 (44%), Positives = 61/97 (62%)
Frame = +1
Query: 217 VYIFEAGWSTTCAMFIGDGAKLVRDAFALAKEKAPAIIFIDELDAIGTKRFDSEKAGDRE 396
V F S +F+G GA +RD F A++ +P+IIFIDELDA+G KR ++ + E
Sbjct: 393 VPFFSVSASEFVELFVGRGAARIRDLFNAARKNSPSIIFIDELDAVGGKR---GRSFNDE 449
Query: 397 VQRTMLELLNQLDGFSSTADIKVIAATNRVDILDPAL 507
+T+ +LL ++DGF S + VIAATNR + LD AL
Sbjct: 450 RDQTLNQLLTEMDGFESDTKVIVIAATNRPEALDSAL 486
Score = 63.7 bits (148), Expect = 1e-10
Identities = 33/82 (40%), Positives = 46/82 (56%)
Frame = +2
Query: 8 RVDERPTEQYSDIGGLDKQIQELIEAVVLPMTHKEKFVNLGIHPPKGVLLYGPPGTGKTL 187
R + PT + D+ G+D EL+E +V + + LG P+GVLL GPPGTGKTL
Sbjct: 324 RRSKNPTVGFDDVEGVDSAKDELVE-IVSCLQGSINYKKLGARLPRGVLLVGPPGTGKTL 382
Query: 188 LARACAAQTKSTFLKLAGPQLV 253
LARA A + F ++ + V
Sbjct: 383 LARAVAGEAGVPFFSVSASEFV 404
>At1g07510.1 68414.m00804 FtsH protease, putative similar to
AAA-metalloprotease FtsH [Pisum sativum] GI:15021761;
contains Pfam profiles PF01434: Peptidase family M41,
PF00004: ATPase AAA family
Length = 813
Score = 79.0 bits (186), Expect = 3e-15
Identities = 42/85 (49%), Positives = 57/85 (67%), Gaps = 1/85 (1%)
Frame = +1
Query: 256 MFIGDGAKLVRDAFALAKEKAPAIIFIDELDAIGTKR-FDSEKAGDREVQRTMLELLNQL 432
MF+G G VR+ F A++ AP+IIFIDE+DAIG R G+ E + T+ +LL ++
Sbjct: 399 MFVGVGPSRVRNLFQEARQCAPSIIFIDEIDAIGRARGRGGFSGGNDERESTLNQLLVEM 458
Query: 433 DGFSSTADIKVIAATNRVDILDPAL 507
DGF +TA + V+A TNR DILD AL
Sbjct: 459 DGFGTTAGVVVLAGTNRPDILDKAL 483
Score = 66.1 bits (154), Expect = 2e-11
Identities = 35/94 (37%), Positives = 56/94 (59%), Gaps = 2/94 (2%)
Frame = +2
Query: 5 TRVDERPTEQ--YSDIGGLDKQIQELIEAVVLPMTHKEKFVNLGIHPPKGVLLYGPPGTG 178
TR D+ + + D+ G ++ QE++E V + + +K+ +LG PKG LL GPPGTG
Sbjct: 314 TRADKNSKNKIYFKDVAGCEEAKQEIMEFVHF-LQNPKKYEDLGAKIPKGALLVGPPGTG 372
Query: 179 KTLLARACAAQTKSTFLKLAGPQLVRCSLVMVPS 280
KTLLA+A A ++ FL ++G + + + PS
Sbjct: 373 KTLLAKATAGESAVPFLSISGSDFMEMFVGVGPS 406
>At1g03000.1 68414.m00271 AAA-type ATPase family protein contains
Pfam domain, PF00004: ATPase, AAA family ('A'TPases
'A'ssociated with diverse cellular 'A'ctivities)
Length = 941
Score = 78.2 bits (184), Expect = 5e-15
Identities = 35/77 (45%), Positives = 51/77 (66%)
Frame = +2
Query: 23 PTEQYSDIGGLDKQIQELIEAVVLPMTHKEKFVNLGIHPPKGVLLYGPPGTGKTLLARAC 202
P ++ D+GGL+ +++ V LP+ HK+ F + G+ GVLLYGPPGTGKTLLA+A
Sbjct: 653 PNVKWDDVGGLEDVKTSILDTVQLPLLHKDLFSS-GLRKRSGVLLYGPPGTGKTLLAKAV 711
Query: 203 AAQTKSTFLKLAGPQLV 253
A + FL + GP+L+
Sbjct: 712 ATECSLNFLSVKGPELI 728
Score = 68.1 bits (159), Expect = 5e-12
Identities = 35/85 (41%), Positives = 54/85 (63%), Gaps = 1/85 (1%)
Frame = +1
Query: 256 MFIGDGAKLVRDAFALAKEKAPAIIFIDELDAIGTKRFDSEKAGDREVQRTMLELLNQLD 435
M+IG+ K VRD F A+ P +IF DELD++ R S +G + R + ++L ++D
Sbjct: 730 MYIGESEKNVRDIFEKARSARPCVIFFDELDSLAPARGASGDSGG-VMDRVVSQMLAEID 788
Query: 436 GFS-STADIKVIAATNRVDILDPAL 507
G S S+ D+ +I A+NR D++DPAL
Sbjct: 789 GLSDSSQDLFIIGASNRPDLIDPAL 813
>At2g45500.1 68415.m05659 AAA-type ATPase family protein similar to
SP|Q9QYY8 Spastin (Fragment) {Mus musculus}; contains
Pfam profiles PF00004: ATPase AAA family, PF04212: MIT
domain
Length = 487
Score = 73.3 bits (172), Expect = 1e-13
Identities = 33/82 (40%), Positives = 54/82 (65%)
Frame = +2
Query: 5 TRVDERPTEQYSDIGGLDKQIQELIEAVVLPMTHKEKFVNLGIHPPKGVLLYGPPGTGKT 184
T VD P+ ++ D+ GL+ Q L+E V+LP ++ F L P +G+LL+GPPG GKT
Sbjct: 205 TIVDRSPSVKWDDVAGLNGAKQALLEMVILPAKRRDLFTGLR-RPARGLLLFGPPGNGKT 263
Query: 185 LLARACAAQTKSTFLKLAGPQL 250
+LA+A A+++++TF ++ L
Sbjct: 264 MLAKAVASESQATFFNVSASSL 285
Score = 58.4 bits (135), Expect = 4e-09
Identities = 34/107 (31%), Positives = 58/107 (54%), Gaps = 2/107 (1%)
Frame = +1
Query: 193 ESLRCSNKVYIFEAGWSTTCAMFIGDGAKLVRDAFALAKEKAPAIIFIDELDAIGTKRFD 372
+++ ++ F S+ + ++G+ KLV+ F +A + P++IF+DE+D+I + R
Sbjct: 267 KAVASESQATFFNVSASSLTSKWVGEAEKLVKTLFQVAISRQPSVIFMDEIDSIMSTRST 326
Query: 373 SEKAGDREVQRTMLELLNQLDGFSSTAD--IKVIAATNRVDILDPAL 507
SE R R E L Q DG +S D + +I ATN+ LD A+
Sbjct: 327 SENEASR---RLKSEFLIQFDGVTSNPDDLVIIIGATNKPQELDDAV 370
>At2g26140.1 68415.m03137 FtsH protease, putative contains
similarity to YME1 GI:295582, a member of the
ftsH-SEC18-PAS1-CDC48 family of putative ATPase-encoding
genes from [Saccharomyces cerevisiae]
Length = 717
Score = 72.9 bits (171), Expect = 2e-13
Identities = 42/97 (43%), Positives = 59/97 (60%)
Frame = +1
Query: 217 VYIFEAGWSTTCAMFIGDGAKLVRDAFALAKEKAPAIIFIDELDAIGTKRFDSEKAGDRE 396
V F S MF+G GA+ VRD F+ AK+ +P IIFIDE+DAIG R ++ +
Sbjct: 286 VPFFSCSGSEFEEMFVGVGARRVRDLFSAAKKCSPCIIFIDEIDAIGGSRNPKDQ---QY 342
Query: 397 VQRTMLELLNQLDGFSSTADIKVIAATNRVDILDPAL 507
++ T+ ++L +LDGF I V+AATN + LD AL
Sbjct: 343 MKMTLNQMLVELDGFKQNEGIIVVAATNFPESLDKAL 379
Score = 62.5 bits (145), Expect = 3e-10
Identities = 32/72 (44%), Positives = 45/72 (62%)
Frame = +2
Query: 32 QYSDIGGLDKQIQELIEAVVLPMTHKEKFVNLGIHPPKGVLLYGPPGTGKTLLARACAAQ 211
++SD+ G+D+ EL E +V + ++F LG PKGVLL GPPGTGKT+LARA A +
Sbjct: 225 KFSDVKGVDEAKAEL-EEIVHYLRDPKRFTRLGGKLPKGVLLVGPPGTGKTMLARAIAGE 283
Query: 212 TKSTFLKLAGPQ 247
F +G +
Sbjct: 284 AGVPFFSCSGSE 295
>At1g05910.1 68414.m00620 cell division cycle protein 48-related /
CDC48-related similar to SP|P54609 Cell division cycle
protein 48 homolog {Arabidopsis thaliana}; contains Pfam
profiles PF00004: ATPase AAA family, PF00439:
Bromodomain
Length = 1210
Score = 70.1 bits (164), Expect = 1e-12
Identities = 34/60 (56%), Positives = 42/60 (70%), Gaps = 2/60 (3%)
Frame = +2
Query: 35 YSDIGGLDKQIQELIEAVVLPMTHKEKFVNLGIHPPKGVLLYGPPGTGKTLLAR--ACAA 208
+ DIGGL + I +L E V P+ + E F + I PP+GVLL GPPGTGKTL+AR ACAA
Sbjct: 380 FDDIGGLSEYINDLKEMVFFPLLYPEFFASYSITPPRGVLLCGPPGTGKTLIARALACAA 439
Score = 57.2 bits (132), Expect = 1e-08
Identities = 33/123 (26%), Positives = 60/123 (48%)
Frame = +1
Query: 184 IAGESLRCSNKVYIFEAGWSTTCAMFIGDGAKLVRDAFALAKEKAPAIIFIDELDAIGTK 363
+A + + KV + + + ++G+ + ++ F A+ P+IIF DE+D +
Sbjct: 435 LACAASKAGQKVSFYMRKGADVLSKWVGEAERQLKLLFEEAQRNQPSIIFFDEIDGLAPV 494
Query: 364 RFDSEKAGDREVQRTMLELLNQLDGFSSTADIKVIAATNRVDILDPALPDLDVWTEKSNF 543
R ++ + T+L L +DG S + +I ATNRVD +D AL + + NF
Sbjct: 495 RSSKQEQIHNSIVSTLLAL---MDGLDSRGQVVLIGATNRVDAIDGALRRPGRFDREFNF 551
Query: 544 LIP 552
+P
Sbjct: 552 SLP 554
Score = 40.3 bits (90), Expect = 0.001
Identities = 23/60 (38%), Positives = 29/60 (48%)
Frame = +3
Query: 510 RSGRLDRKIEFPHPNEEARARIMQIHSRKMNVSPDVNFEELSRSTDDFQWAPSGKAVCVE 689
R GR DR+ F P EARA I+ IH+RK P +E +T KA+C E
Sbjct: 541 RPGRFDREFNFSLPGCEARAEILDIHTRKWKHPPTRELKEELAATCVGYCGADLKALCTE 600
>At4g23940.1 68417.m03443 FtsH protease, putative contains
similarity to zinc dependent protease GI:7650138 from
[Arabidopsis thaliana]
Length = 946
Score = 68.9 bits (161), Expect = 3e-12
Identities = 34/82 (41%), Positives = 51/82 (62%)
Frame = +2
Query: 8 RVDERPTEQYSDIGGLDKQIQELIEAVVLPMTHKEKFVNLGIHPPKGVLLYGPPGTGKTL 187
RVD +++D+ G+D+ + EL E V + + + F +GI PP GVLL GPPG GKTL
Sbjct: 420 RVDGSTGVKFADVAGIDEAVDELQELVKY-LKNPDLFDKMGIKPPHGVLLEGPPGCGKTL 478
Query: 188 LARACAAQTKSTFLKLAGPQLV 253
+A+A A + F ++AG + V
Sbjct: 479 VAKAIAGEAGVPFYQMAGSEFV 500
Score = 67.7 bits (158), Expect = 7e-12
Identities = 39/105 (37%), Positives = 59/105 (56%), Gaps = 8/105 (7%)
Frame = +1
Query: 217 VYIFEAGWSTTCAMFIGDGAKLVRDAFALAKEKAPAIIFIDELDAIGTKR---FDSE--- 378
V ++ S + +G G+ +RD F AK P++IFIDE+DA+ T+R F
Sbjct: 489 VPFYQMAGSEFVEVLVGVGSARIRDLFKRAKVNKPSVIFIDEIDALATRRQGIFKENSDQ 548
Query: 379 --KAGDREVQRTMLELLNQLDGFSSTADIKVIAATNRVDILDPAL 507
A +E + T+ +LL +LDGF + + + ATNR D+LDPAL
Sbjct: 549 LYNAATQERETTLNQLLIELDGFDTGKGVIFLGATNRRDLLDPAL 593
Score = 37.5 bits (83), Expect = 0.008
Identities = 19/61 (31%), Positives = 30/61 (49%)
Frame = +3
Query: 498 PCPARSGRLDRKIEFPHPNEEARARIMQIHSRKMNVSPDVNFEELSRSTDDFQWAPSGKA 677
P R GR DRKI PN + R I++IH+ K+ +S V+ + + + A +
Sbjct: 591 PALLRPGRFDRKIRVRPPNAKGRLDILKIHASKVKMSDSVDLSSYASNLPGWSGAKLAQL 650
Query: 678 V 680
V
Sbjct: 651 V 651
>At2g27600.1 68415.m03346 AAA-type ATPase family protein / vacuolar
sorting protein-related similar to SP|P46467 SKD1
protein (Vacuolar sorting protein 4b) {Mus musculus};
contains Pfam profiles PF00004: ATPase AAA family,
PF04212: MIT domain
Length = 435
Score = 68.5 bits (160), Expect = 4e-12
Identities = 35/81 (43%), Positives = 49/81 (60%)
Frame = +2
Query: 11 VDERPTEQYSDIGGLDKQIQELIEAVVLPMTHKEKFVNLGIHPPKGVLLYGPPGTGKTLL 190
V E+P ++SD+ GL+ Q L EAV+LP+ + F P + LLYGPPGTGK+ L
Sbjct: 123 VREKPNIKWSDVAGLESAKQALQEAVILPVKFPQFFTGKR-RPWRAFLLYGPPGTGKSYL 181
Query: 191 ARACAAQTKSTFLKLAGPQLV 253
A+A A + STF ++ LV
Sbjct: 182 AKAVATEADSTFFSVSSSDLV 202
Score = 57.2 bits (132), Expect = 1e-08
Identities = 34/96 (35%), Positives = 55/96 (57%), Gaps = 2/96 (2%)
Frame = +1
Query: 226 FEAGWSTTCAMFIGDGAKLVRDAFALAKEKAPAIIFIDELDAI-GTKRFDSEKAGDREVQ 402
F S + ++G+ KLV + F +A+E AP+IIF+DE+D++ GT+ +E R ++
Sbjct: 194 FSVSSSDLVSKWMGESEKLVSNLFEMARESAPSIIFVDEIDSLCGTRGEGNESEASRRIK 253
Query: 403 RTMLELLNQLDGFSSTAD-IKVIAATNRVDILDPAL 507
ELL Q+ G + + V+AATN LD A+
Sbjct: 254 ---TELLVQMQGVGHNDEKVLVLAATNTPYALDQAI 286
>At3g19740.1 68416.m02499 AAA-type ATPase family protein contains
Pfam domain, PF00004: ATPase, AAA family
Length = 439
Score = 68.1 bits (159), Expect = 5e-12
Identities = 35/75 (46%), Positives = 48/75 (64%), Gaps = 2/75 (2%)
Frame = +2
Query: 32 QYSDIGGLDKQIQELIEAVVLPMTHKEKFV--NLGIHPPKGVLLYGPPGTGKTLLARACA 205
++ DIG L+ + L E V+LPM E F NL + P KG+LL+GPPGTGKTLLA+A A
Sbjct: 148 KFDDIGALEHVKKTLNELVILPMRRPELFTRGNL-LRPCKGILLFGPPGTGKTLLAKALA 206
Query: 206 AQTKSTFLKLAGPQL 250
+ + F+ + G L
Sbjct: 207 TEAGANFISITGSTL 221
Score = 45.6 bits (103), Expect = 3e-05
Identities = 31/92 (33%), Positives = 48/92 (52%), Gaps = 3/92 (3%)
Frame = +1
Query: 241 STTCAMFIGDGAKLVRDAFALAKEKAPAIIFIDELDA-IGTKRFDSEKAGDREVQRTMLE 417
ST + + GD KL + F+ A + AP IIF+DE+D+ +G + E R ++ E
Sbjct: 219 STLTSKWFGDAEKLTKALFSFASKLAPVIIFVDEVDSLLGARGGAFEHEATRRMRN---E 275
Query: 418 LLNQLDGFSS--TADIKVIAATNRVDILDPAL 507
+ DG S + I ++ ATNR LD A+
Sbjct: 276 FMAAWDGLRSKDSQRILILGATNRPFDLDDAV 307
>At2g03670.1 68415.m00326 AAA-type ATPase family protein contains
Pfam domain, PF00004: ATPase, AAA family ('A'TPases
'A'ssociated with diverse cellular 'A'ctivities)
Length = 603
Score = 68.1 bits (159), Expect = 5e-12
Identities = 32/78 (41%), Positives = 48/78 (61%)
Frame = +2
Query: 17 ERPTEQYSDIGGLDKQIQELIEAVVLPMTHKEKFVNLGIHPPKGVLLYGPPGTGKTLLAR 196
E P + D+GGL ++L +AV P+ H FV +GI P +G+LL+GPPG KT LA+
Sbjct: 279 EIPKVTWDDVGGLKDLKKKLQQAVEWPIKHSAAFVKMGISPMRGILLHGPPGCSKTTLAK 338
Query: 197 ACAAQTKSTFLKLAGPQL 250
A A +++F L+ +L
Sbjct: 339 AAANAAQASFFSLSCAEL 356
Score = 66.1 bits (154), Expect = 2e-11
Identities = 33/86 (38%), Positives = 50/86 (58%), Gaps = 1/86 (1%)
Frame = +1
Query: 253 AMFIGDGAKLVRDAFALAKEKAPAIIFIDELDAIGTKRFDSEKAGDREV-QRTMLELLNQ 429
+M++G+G L+R+ F A+ +P+IIF DE D + KR D + V +R + LL +
Sbjct: 358 SMYVGEGEALLRNTFQRARLASPSIIFFDEADVVACKRGDESSSNSSTVGERLLSTLLTE 417
Query: 430 LDGFSSTADIKVIAATNRVDILDPAL 507
+DG I V+AATNR +D AL
Sbjct: 418 MDGLEEAKGILVLAATNRPYAIDAAL 443
Score = 58.4 bits (135), Expect = 4e-09
Identities = 32/85 (37%), Positives = 51/85 (60%), Gaps = 4/85 (4%)
Frame = +1
Query: 265 GDGAKLVRDAFALAKEKA----PAIIFIDELDAIGTKRFDSEKAGDREVQRTMLELLNQL 432
G+ K++R+AFA A A P++IFIDE+D + +R D+ + D + + L++
Sbjct: 98 GESEKVLREAFAEASSHAVSDKPSVIFIDEIDVLCPRR-DARREQDVRIASQLFTLMDSN 156
Query: 433 DGFSSTADIKVIAATNRVDILDPAL 507
SS + V+A+TNRVD +DPAL
Sbjct: 157 KPSSSAPRVVVVASTNRVDAIDPAL 181
Score = 58.0 bits (134), Expect = 6e-09
Identities = 26/67 (38%), Positives = 42/67 (62%)
Frame = +2
Query: 38 SDIGGLDKQIQELIEAVVLPMTHKEKFVNLGIHPPKGVLLYGPPGTGKTLLARACAAQTK 217
++IGG ++ +Q L E ++ P + + LG+ P+G+LLYGPPGTGKT L RA +
Sbjct: 22 AEIGGNERALQALRELIIFPFRYPLEARTLGLKWPRGLLLYGPPGTGKTSLVRAVVQECD 81
Query: 218 STFLKLA 238
+ + L+
Sbjct: 82 AHLIVLS 88
Score = 47.2 bits (107), Expect = 1e-05
Identities = 22/64 (34%), Positives = 40/64 (62%)
Frame = +3
Query: 498 PCPARSGRLDRKIEFPHPNEEARARIMQIHSRKMNVSPDVNFEELSRSTDDFQWAPSGKA 677
P R+GR D +E PNEE R +I+Q++++K+N+ P V+ + ++ S + + A +A
Sbjct: 179 PALRRAGRFDALVEVSTPNEEDRLKILQLYTKKVNLDPSVDLQAIAISCNGYVGADL-EA 237
Query: 678 VCVE 689
+C E
Sbjct: 238 LCRE 241
Score = 44.4 bits (100), Expect = 7e-05
Identities = 20/51 (39%), Positives = 30/51 (58%)
Frame = +3
Query: 510 RSGRLDRKIEFPHPNEEARARIMQIHSRKMNVSPDVNFEELSRSTDDFQWA 662
R GR D + P P+ EAR I+Q+H+R M + DV+ +++ TD F A
Sbjct: 445 RPGRFDLVLYVPPPDLEARFEILQVHTRNMTLGDDVDLRKIAEETDLFTGA 495
>At1g50140.1 68414.m05623 AAA-type ATPase family protein contains
Pfam domain, PF00004: ATPase, AAA family
Length = 640
Score = 68.1 bits (159), Expect = 5e-12
Identities = 35/75 (46%), Positives = 48/75 (64%), Gaps = 2/75 (2%)
Frame = +2
Query: 32 QYSDIGGLDKQIQELIEAVVLPMTHKEKFV--NLGIHPPKGVLLYGPPGTGKTLLARACA 205
++ DIG L+ + L E V+LPM E F NL + P KG+LL+GPPGTGKTLLA+A A
Sbjct: 349 KFEDIGALEDVKKALNELVILPMRRPELFARGNL-LRPCKGILLFGPPGTGKTLLAKALA 407
Query: 206 AQTKSTFLKLAGPQL 250
+ + F+ + G L
Sbjct: 408 TEAGANFISITGSTL 422
Score = 48.8 bits (111), Expect = 3e-06
Identities = 32/92 (34%), Positives = 49/92 (53%), Gaps = 3/92 (3%)
Frame = +1
Query: 241 STTCAMFIGDGAKLVRDAFALAKEKAPAIIFIDELDA-IGTKRFDSEKAGDREVQRTMLE 417
ST + + GD KL + F+ A + AP IIF+DE+D+ +G + SE R ++ E
Sbjct: 420 STLTSKWFGDAEKLTKALFSFATKLAPVIIFVDEIDSLLGARGGSSEHEATRRMRN---E 476
Query: 418 LLNQLDGFSS--TADIKVIAATNRVDILDPAL 507
+ DG S + I ++ ATNR LD A+
Sbjct: 477 FMAAWDGLRSKDSQRILILGATNRPFDLDDAV 508
>At1g80350.1 68414.m09406 katanin 1 (KTN1) identical to katanin 1
(KTN1) [Arabidopsis thaliana] GI:14133602
Length = 523
Score = 67.7 bits (158), Expect = 7e-12
Identities = 35/80 (43%), Positives = 50/80 (62%)
Frame = +2
Query: 11 VDERPTEQYSDIGGLDKQIQELIEAVVLPMTHKEKFVNLGIHPPKGVLLYGPPGTGKTLL 190
+D P ++ D+ GL + + L EAVVLP+ E F + P KGVL++GPPGTGKTLL
Sbjct: 230 LDSTPGVRWDDVAGLSEAKRLLEEAVVLPLWMPEYFQGIR-RPWKGVLMFGPPGTGKTLL 288
Query: 191 ARACAAQTKSTFLKLAGPQL 250
A+A A + +TF ++ L
Sbjct: 289 AKAVATECGTTFFNVSSATL 308
Score = 50.4 bits (115), Expect = 1e-06
Identities = 38/103 (36%), Positives = 56/103 (54%), Gaps = 9/103 (8%)
Frame = +1
Query: 226 FEAGWSTTCAMFIGDGAKLVRDAFALAKEKAPAIIFIDELDAIGTKRFDSEKAGDRE-VQ 402
F +T + + G+ ++VR F LA+ AP+ IFIDE+D++ R S G+ E +
Sbjct: 301 FNVSSATLASKWRGESERMVRCLFDLARAYAPSTIFIDEIDSLCNSRGGS---GEHESSR 357
Query: 403 RTMLELLNQLDGFSSTAD--------IKVIAATNRVDILDPAL 507
R ELL Q+DG S+TA + V+AATN +D AL
Sbjct: 358 RVKSELLVQVDGVSNTATNEDGSRKIVMVLAATNFPWDIDEAL 400
>At5g53540.1 68418.m06653 MSP1 protein, putative /
intramitochondrial sorting protein, putative similar to
Swiss-Prot:P28737 MSP1 protein (TAT-binding homolog 4)
[Saccharomyces cerevisiae]; contains Pfam domain,
PF00004: ATPase, AAA family
Length = 403
Score = 67.3 bits (157), Expect = 9e-12
Identities = 32/69 (46%), Positives = 46/69 (66%), Gaps = 1/69 (1%)
Frame = +2
Query: 32 QYSDIGGLDKQIQELIEAVVLPMTHKEKFV-NLGIHPPKGVLLYGPPGTGKTLLARACAA 208
++ IGGL+ Q L E V+LP+ E F + P KGVLLYGPPGTGKT+LA+A A
Sbjct: 85 EFGSIGGLESIKQALYELVILPLKRPELFAYGKLLGPQKGVLLYGPPGTGKTMLAKAIAR 144
Query: 209 QTKSTFLKL 235
++++ F+ +
Sbjct: 145 ESEAVFINV 153
Score = 53.2 bits (122), Expect = 2e-07
Identities = 36/92 (39%), Positives = 51/92 (55%), Gaps = 3/92 (3%)
Frame = +1
Query: 241 STTCAMFIGDGAKLVRDAFALAKEKAPAIIFIDELDAIGTKRFDSEKAGDREVQRTM-LE 417
S + + GD KLV F+LA + PAIIFIDE+D+ +R ++ D E M E
Sbjct: 156 SNLMSKWFGDAQKLVSAVFSLAYKLQPAIIFIDEVDSFLGQR----RSTDNEAMSNMKTE 211
Query: 418 LLNQLDGFSS--TADIKVIAATNRVDILDPAL 507
+ DGF++ A + V+AATNR LD A+
Sbjct: 212 FMALWDGFTTDQNARVMVLAATNRPSELDEAI 243
>At3g01610.1 68416.m00092 AAA-type ATPase family protein contains
Pfam domain, PF00004: ATPase, AAA family ('A'TPases
'A'ssociated with diverse cellular 'A'ctivities)
Length = 820
Score = 66.1 bits (154), Expect = 2e-11
Identities = 28/73 (38%), Positives = 44/73 (60%)
Frame = +2
Query: 35 YSDIGGLDKQIQELIEAVVLPMTHKEKFVNLGIHPPKGVLLYGPPGTGKTLLARACAAQT 214
+ D GG+ K + EL V+ P+ + E F +G+ PP G+L +GPPG GKT LA A A +
Sbjct: 232 FKDFGGIKKILDELEMNVLFPILNPEPFKKIGVKPPSGILFHGPPGCGKTKLANAIANEA 291
Query: 215 KSTFLKLAGPQLV 253
F K++ +++
Sbjct: 292 GVPFYKISATEVI 304
Score = 59.7 bits (138), Expect = 2e-09
Identities = 27/77 (35%), Positives = 44/77 (57%)
Frame = +2
Query: 23 PTEQYSDIGGLDKQIQELIEAVVLPMTHKEKFVNLGIHPPKGVLLYGPPGTGKTLLARAC 202
P ++ D+GGLD + +V P+ + + G+ G LLYGPPG GKTL+A+A
Sbjct: 523 PDVKWDDVGGLDHLRLQFNRYIVRPIKKPDIYKAFGVDLETGFLLYGPPGCGKTLIAKAA 582
Query: 203 AAQTKSTFLKLAGPQLV 253
A + + F+ + G +L+
Sbjct: 583 ANEAGANFMHIKGAELL 599
Score = 58.4 bits (135), Expect = 4e-09
Identities = 32/82 (39%), Positives = 48/82 (58%)
Frame = +1
Query: 259 FIGDGAKLVRDAFALAKEKAPAIIFIDELDAIGTKRFDSEKAGDREVQRTMLELLNQLDG 438
++G+ +R F A+ AP +IF DE+DA+ T R K G V+R + + L +LDG
Sbjct: 602 YVGESELAIRTLFQRARTCAPCVIFFDEVDALTTSR---GKEGAWVVERLLNQFLVELDG 658
Query: 439 FSSTADIKVIAATNRVDILDPA 504
++ VI ATNR D++DPA
Sbjct: 659 -GERRNVYVIGATNRPDVVDPA 679
Score = 56.8 bits (131), Expect = 1e-08
Identities = 36/91 (39%), Positives = 53/91 (58%), Gaps = 10/91 (10%)
Frame = +1
Query: 265 GDGAKLVRDAFALAKEKAPAIIFIDELDAIGTKRFDSEKAGDREVQRTMLELLNQLDG-- 438
G + +R+ F+ A AP+I+FIDE+DAIG+KR + ++ ++ R + +LL +DG
Sbjct: 309 GASEENIRELFSKAYRTAPSIVFIDEIDAIGSKRENQQREMEK---RIVTQLLTCMDGPG 365
Query: 439 --------FSSTADIKVIAATNRVDILDPAL 507
SS + VI ATNR D LDPAL
Sbjct: 366 NKGDKNAPDSSAGFVLVIGATNRPDALDPAL 396
Score = 35.9 bits (79), Expect = 0.025
Identities = 16/52 (30%), Positives = 30/52 (57%)
Frame = +3
Query: 498 PCPARSGRLDRKIEFPHPNEEARARIMQIHSRKMNVSPDVNFEELSRSTDDF 653
P RSGR + +I P+E+ARA I+ + ++K+ + + + ++R T F
Sbjct: 394 PALRRSGRFETEIALTAPDEDARAEILSVVAQKLRLEGPFDKKRIARLTPGF 445
>At4g27680.1 68417.m03980 MSP1 protein, putative /
intramitochondrial sorting protein, putative similar to
Swiss-Prot:P28737 MSP1 protein (TAT-binding homolog 4)
[Saccharomyces cerevisiae]; contains Pfam domain,
PF00004: ATPase, AAA family
Length = 398
Score = 65.7 bits (153), Expect = 3e-11
Identities = 32/69 (46%), Positives = 45/69 (65%), Gaps = 1/69 (1%)
Frame = +2
Query: 32 QYSDIGGLDKQIQELIEAVVLPMTHKEKFV-NLGIHPPKGVLLYGPPGTGKTLLARACAA 208
++ IGGL+ Q L E V+LP+ E F + P KGVLLYGPPGTGKT+LA+A A
Sbjct: 82 EFGSIGGLETIKQALYELVILPLKRPELFAYGKLLGPQKGVLLYGPPGTGKTMLAKAIAK 141
Query: 209 QTKSTFLKL 235
++ + F+ +
Sbjct: 142 ESGAVFINV 150
Score = 52.4 bits (120), Expect = 3e-07
Identities = 36/92 (39%), Positives = 51/92 (55%), Gaps = 3/92 (3%)
Frame = +1
Query: 241 STTCAMFIGDGAKLVRDAFALAKEKAPAIIFIDELDAIGTKRFDSEKAGDREVQRTM-LE 417
S + + GD KLV F+LA + PAIIFIDE+++ +R ++ D E M E
Sbjct: 153 SNLMSKWFGDAQKLVSAVFSLAYKLQPAIIFIDEVESFLGQR----RSTDHEAMANMKTE 208
Query: 418 LLNQLDGFSST--ADIKVIAATNRVDILDPAL 507
+ DGFS+ A + V+AATNR LD A+
Sbjct: 209 FMALWDGFSTDPHARVMVLAATNRPSELDEAI 240
>At2g34560.2 68415.m04246 katanin, putative similar to katanin p60
subunit [Strongylocentrotus purpuratus] GI:3098603;
contains Pfam profile PF00004: ATPase AAA family
Length = 393
Score = 64.5 bits (150), Expect = 6e-11
Identities = 32/77 (41%), Positives = 49/77 (63%)
Frame = +2
Query: 23 PTEQYSDIGGLDKQIQELIEAVVLPMTHKEKFVNLGIHPPKGVLLYGPPGTGKTLLARAC 202
P ++ I GL+ + L EAVV+P+ + F L + P KG+LL+GPPGTGKT+LA+A
Sbjct: 107 PNIKWESIKGLENAKKLLKEAVVMPIKYPTYFNGL-LTPWKGILLFGPPGTGKTMLAKAV 165
Query: 203 AAQTKSTFLKLAGPQLV 253
A + +TF ++ +V
Sbjct: 166 ATECNTTFFNISASSVV 182
Score = 62.1 bits (144), Expect = 3e-10
Identities = 40/115 (34%), Positives = 62/115 (53%), Gaps = 1/115 (0%)
Frame = +1
Query: 226 FEAGWSTTCAMFIGDGAKLVRDAFALAKEKAPAIIFIDELDAIGTKRFDSEKAGDREVQR 405
F S+ + + GD KL+R F LA+ AP+ IF+DE+DAI ++R ++ +R
Sbjct: 174 FNISASSVVSKWRGDSEKLIRVLFDLARHHAPSTIFLDEIDAIISQRGGEGRSEHEASRR 233
Query: 406 TMLELLNQLDGFSSTAD-IKVIAATNRVDILDPALPDLDVWTEKSNFLIPMKKPE 567
ELL Q+DG T + + V+AATN LD A+ + + L+P+ PE
Sbjct: 234 LKTELLIQMDGLQKTNELVFVLAATNLPWELDAAM----LRRLEKRILVPLPDPE 284
>At2g34560.1 68415.m04245 katanin, putative similar to katanin p60
subunit [Strongylocentrotus purpuratus] GI:3098603;
contains Pfam profile PF00004: ATPase AAA family
Length = 384
Score = 64.5 bits (150), Expect = 6e-11
Identities = 32/77 (41%), Positives = 49/77 (63%)
Frame = +2
Query: 23 PTEQYSDIGGLDKQIQELIEAVVLPMTHKEKFVNLGIHPPKGVLLYGPPGTGKTLLARAC 202
P ++ I GL+ + L EAVV+P+ + F L + P KG+LL+GPPGTGKT+LA+A
Sbjct: 98 PNIKWESIKGLENAKKLLKEAVVMPIKYPTYFNGL-LTPWKGILLFGPPGTGKTMLAKAV 156
Query: 203 AAQTKSTFLKLAGPQLV 253
A + +TF ++ +V
Sbjct: 157 ATECNTTFFNISASSVV 173
Score = 62.1 bits (144), Expect = 3e-10
Identities = 40/115 (34%), Positives = 62/115 (53%), Gaps = 1/115 (0%)
Frame = +1
Query: 226 FEAGWSTTCAMFIGDGAKLVRDAFALAKEKAPAIIFIDELDAIGTKRFDSEKAGDREVQR 405
F S+ + + GD KL+R F LA+ AP+ IF+DE+DAI ++R ++ +R
Sbjct: 165 FNISASSVVSKWRGDSEKLIRVLFDLARHHAPSTIFLDEIDAIISQRGGEGRSEHEASRR 224
Query: 406 TMLELLNQLDGFSSTAD-IKVIAATNRVDILDPALPDLDVWTEKSNFLIPMKKPE 567
ELL Q+DG T + + V+AATN LD A+ + + L+P+ PE
Sbjct: 225 LKTELLIQMDGLQKTNELVFVLAATNLPWELDAAM----LRRLEKRILVPLPDPE 275
>At1g64110.2 68414.m07264 AAA-type ATPase family protein contains
Pfam domain, PF00004: ATPase, AAA family
Length = 829
Score = 64.1 bits (149), Expect = 8e-11
Identities = 28/68 (41%), Positives = 46/68 (67%)
Frame = +2
Query: 35 YSDIGGLDKQIQELIEAVVLPMTHKEKFVNLGIHPPKGVLLYGPPGTGKTLLARACAAQT 214
+ DIG LD+ + L E V+LP+ + F + P +G+LL+GPPGTGKT+LA+A A +
Sbjct: 520 FKDIGALDEIKESLQELVMLPLRRPDLFTGGLLKPCRGILLFGPPGTGKTMLAKAIAKEA 579
Query: 215 KSTFLKLA 238
++F+ ++
Sbjct: 580 GASFINVS 587
Score = 49.2 bits (112), Expect = 3e-06
Identities = 33/92 (35%), Positives = 51/92 (55%), Gaps = 3/92 (3%)
Frame = +1
Query: 241 STTCAMFIGDGAKLVRDAFALAKEKAPAIIFIDELDAIGTKRFDSEKAGDREVQRTML-E 417
ST + + G+ K VR F LA + +P IIF+DE+D++ +R + G+ E R + E
Sbjct: 589 STITSKWFGEDEKNVRALFTLASKVSPTIIFVDEVDSMLGQR---TRVGEHEAMRKIKNE 645
Query: 418 LLNQLDGFSSTAD--IKVIAATNRVDILDPAL 507
++ DG + I V+AATNR LD A+
Sbjct: 646 FMSHWDGLMTKPGERILVLAATNRPFDLDEAI 677
>At1g64110.1 68414.m07263 AAA-type ATPase family protein contains
Pfam domain, PF00004: ATPase, AAA family
Length = 824
Score = 64.1 bits (149), Expect = 8e-11
Identities = 28/68 (41%), Positives = 46/68 (67%)
Frame = +2
Query: 35 YSDIGGLDKQIQELIEAVVLPMTHKEKFVNLGIHPPKGVLLYGPPGTGKTLLARACAAQT 214
+ DIG LD+ + L E V+LP+ + F + P +G+LL+GPPGTGKT+LA+A A +
Sbjct: 515 FKDIGALDEIKESLQELVMLPLRRPDLFTGGLLKPCRGILLFGPPGTGKTMLAKAIAKEA 574
Query: 215 KSTFLKLA 238
++F+ ++
Sbjct: 575 GASFINVS 582
Score = 49.2 bits (112), Expect = 3e-06
Identities = 33/92 (35%), Positives = 51/92 (55%), Gaps = 3/92 (3%)
Frame = +1
Query: 241 STTCAMFIGDGAKLVRDAFALAKEKAPAIIFIDELDAIGTKRFDSEKAGDREVQRTML-E 417
ST + + G+ K VR F LA + +P IIF+DE+D++ +R + G+ E R + E
Sbjct: 584 STITSKWFGEDEKNVRALFTLASKVSPTIIFVDEVDSMLGQR---TRVGEHEAMRKIKNE 640
Query: 418 LLNQLDGFSSTAD--IKVIAATNRVDILDPAL 507
++ DG + I V+AATNR LD A+
Sbjct: 641 FMSHWDGLMTKPGERILVLAATNRPFDLDEAI 672
>At4g28000.1 68417.m04016 AAA-type ATPase family protein contains
Pfam domain, PF00004: ATPase, AAA family
Length = 726
Score = 63.3 bits (147), Expect = 1e-10
Identities = 27/68 (39%), Positives = 47/68 (69%)
Frame = +2
Query: 35 YSDIGGLDKQIQELIEAVVLPMTHKEKFVNLGIHPPKGVLLYGPPGTGKTLLARACAAQT 214
++DIG LD+ + L E V+LP+ + F + P +G+LL+GPPGTGKT++A+A A +
Sbjct: 413 FADIGSLDETKESLQELVMLPLRRPDLFKGGLLKPCRGILLFGPPGTGKTMMAKAIANEA 472
Query: 215 KSTFLKLA 238
++F+ ++
Sbjct: 473 GASFINVS 480
Score = 52.0 bits (119), Expect = 4e-07
Identities = 35/92 (38%), Positives = 51/92 (55%), Gaps = 3/92 (3%)
Frame = +1
Query: 241 STTCAMFIGDGAKLVRDAFALAKEKAPAIIFIDELDAIGTKRFDSEKAGDREVQRTML-E 417
ST + + G+ K VR F LA + +P IIF+DE+D++ +R + G+ E R + E
Sbjct: 482 STITSKWFGEDEKNVRALFTLAAKVSPTIIFVDEVDSMLGQR---TRVGEHEAMRKIKNE 538
Query: 418 LLNQLDGFSSTAD--IKVIAATNRVDILDPAL 507
+ DG S A I V+AATNR LD A+
Sbjct: 539 FMTHWDGLMSNAGDRILVLAATNRPFDLDEAI 570
>At3g15120.1 68416.m01913 AAA-type ATPase family protein contains
PROSITE domains, PS00674: AAA-protein family signature
and PS00017: ATP/GTP-binding site motif A (P-loop)
Length = 1954
Score = 62.1 bits (144), Expect = 3e-10
Identities = 27/57 (47%), Positives = 40/57 (70%)
Frame = +2
Query: 29 EQYSDIGGLDKQIQELIEAVVLPMTHKEKFVNLGIHPPKGVLLYGPPGTGKTLLARA 199
E + + GL+ Q + E V++P+ + E F NLG+ PP+G+LL+G PGTGKTL+ RA
Sbjct: 716 EGWDSVAGLEGVTQCMKEVVLIPLLYPEFFDNLGLTPPRGILLHGHPGTGKTLVVRA 772
Score = 61.7 bits (143), Expect = 4e-10
Identities = 35/108 (32%), Positives = 54/108 (50%)
Frame = +1
Query: 184 IAGESLRCSNKVYIFEAGWSTTCAMFIGDGAKLVRDAFALAKEKAPAIIFIDELDAIGTK 363
+ G R + ++ F + ++GD + +R F +A++ P+IIF DE+D + K
Sbjct: 773 LIGSLARGNRRIAYFARKGADCLGKYVGDAERQLRLLFQVAEKCQPSIIFFDEIDGLAPK 832
Query: 364 RFDSEKAGDREVQRTMLELLNQLDGFSSTADIKVIAATNRVDILDPAL 507
R + V T+L L LDG S + VI ATN D +DPAL
Sbjct: 833 RSRQQDQTHSSVVSTLLAL---LDGLKSRGSVVVIGATNYPDAIDPAL 877
Score = 37.1 bits (82), Expect = 0.011
Identities = 16/33 (48%), Positives = 22/33 (66%)
Frame = +3
Query: 498 PCPARSGRLDRKIEFPHPNEEARARIMQIHSRK 596
P R GR DR+I FP P+ + RA I+ +H+RK
Sbjct: 875 PALRRPGRFDREIYFPLPSVDDRAAIISLHTRK 907
>At5g08470.1 68418.m00999 peroxisome biogenesis protein (PEX1)
identical to peroxisome biogenesis protein PEX1
[Arabidopsis thaliana] gi|12006272|gb|AAG44817; contains
Pfam profile PF00004: ATPase, AAA family; identical to
cDNA peroxisome biogenesis protein PEX1 (PEX1) mRNA,
partial cds GI:12006271
Length = 1130
Score = 61.7 bits (143), Expect = 4e-10
Identities = 36/84 (42%), Positives = 47/84 (55%), Gaps = 1/84 (1%)
Frame = +1
Query: 259 FIGDGAKLVRDAFALAKEKAPAIIFIDELDAIGTKR-FDSEKAGDREVQRTMLELLNQLD 435
+IG + VRD F+ A AP I+F DE D+I KR D+ DR V + L +LD
Sbjct: 918 YIGASEQAVRDIFSKAAAAAPCILFFDEFDSIAPKRGHDNTGVTDRVVN----QFLTELD 973
Query: 436 GFSSTADIKVIAATNRVDILDPAL 507
G + V AAT+R D+LDPAL
Sbjct: 974 GVEVLTGVFVFAATSRPDLLDPAL 997
Score = 50.4 bits (115), Expect = 1e-06
Identities = 25/73 (34%), Positives = 37/73 (50%)
Frame = +2
Query: 35 YSDIGGLDKQIQELIEAVVLPMTHKEKFVNLGIHPPKGVLLYGPPGTGKTLLARACAAQT 214
+ D+GG+ + E + LP + F + VLLYGPPG GKT + A AA
Sbjct: 843 WEDVGGVTDIKNAIKEMIELPSKFPKIFAKSPLRLRSNVLLYGPPGCGKTHIVGAAAAAC 902
Query: 215 KSTFLKLAGPQLV 253
F+ + GP+L+
Sbjct: 903 SLRFISVKGPELL 915
Score = 42.7 bits (96), Expect = 2e-04
Identities = 23/49 (46%), Positives = 28/49 (57%)
Frame = +2
Query: 116 FVNLGIHPPKGVLLYGPPGTGKTLLARACAAQTKSTFLKLAGPQLVRCS 262
F I P +L+YGPPG+GKT+LARA A + LA LV CS
Sbjct: 585 FSKFKIPSPGHILIYGPPGSGKTILARAAAKYFEEQKDLLAHVILVSCS 633
Score = 37.1 bits (82), Expect = 0.011
Identities = 18/55 (32%), Positives = 30/55 (54%)
Frame = +3
Query: 498 PCPARSGRLDRKIEFPHPNEEARARIMQIHSRKMNVSPDVNFEELSRSTDDFQWA 662
P R GRLDR + P+ R I+ + SRK+ ++ D++ E ++ T+ F A
Sbjct: 995 PALLRPGRLDRLLLCDFPSPPERLEILTVLSRKLLMADDIDLEPIALMTEGFSGA 1049
>At4g24860.1 68417.m03559 AAA-type ATPase family protein contains Pfam
profile PF00004: ATPase, AAA family
Length = 1122
Score = 61.7 bits (143), Expect = 4e-10
Identities = 30/69 (43%), Positives = 44/69 (63%), Gaps = 1/69 (1%)
Frame = +2
Query: 35 YSDIGGLDKQIQELIEAVVLPMTHKEKFVNLGIHPP-KGVLLYGPPGTGKTLLARACAAQ 211
+ DIG L+K L E V+LP+ E F + P KG+LL+GPPGTGKT+LA+A A +
Sbjct: 819 FDDIGALEKVKDILKELVMLPLQRPELFCKGELTKPCKGILLFGPPGTGKTMLAKAVAKE 878
Query: 212 TKSTFLKLA 238
+ F+ ++
Sbjct: 879 ADANFINIS 887
Score = 50.0 bits (114), Expect = 1e-06
Identities = 29/92 (31%), Positives = 53/92 (57%), Gaps = 3/92 (3%)
Frame = +1
Query: 241 STTCAMFIGDGAKLVRDAFALAKEKAPAIIFIDELDA-IGTKRFDSEKAGDREVQRTMLE 417
S+ + + G+G K V+ F+LA + +P++IF+DE+D+ +G + E R+++ E
Sbjct: 889 SSITSKWFGEGEKYVKAVFSLASKMSPSVIFVDEVDSMLGRREHPREHEASRKIKN---E 945
Query: 418 LLNQLDGFSS--TADIKVIAATNRVDILDPAL 507
+ DG ++ + V+AATNR LD A+
Sbjct: 946 FMMHWDGLTTQERERVLVLAATNRPFDLDEAV 977
>At1g02890.1 68414.m00256 AAA-type ATPase family protein contains Pfam
domain, PF00004: ATPase, AAA family; similar to
mitochondrial sorting protein 1 (MSP1) (TAT-binding
homolog 4) (Swiss-Prot:P28737) [Saccharomyces cerevisiae]
Length = 1252
Score = 61.7 bits (143), Expect = 4e-10
Identities = 30/69 (43%), Positives = 44/69 (63%), Gaps = 1/69 (1%)
Frame = +2
Query: 35 YSDIGGLDKQIQELIEAVVLPMTHKEKFVNLGI-HPPKGVLLYGPPGTGKTLLARACAAQ 211
+SDIG L+ L E V+LP+ E F + P KG+LL+GPPGTGKT+LA+A A +
Sbjct: 949 FSDIGALENVKDTLKELVMLPLQRPELFGKGQLTKPTKGILLFGPPGTGKTMLAKAVATE 1008
Query: 212 TKSTFLKLA 238
+ F+ ++
Sbjct: 1009 AGANFINIS 1017
Score = 52.0 bits (119), Expect = 4e-07
Identities = 33/92 (35%), Positives = 52/92 (56%), Gaps = 3/92 (3%)
Frame = +1
Query: 241 STTCAMFIGDGAKLVRDAFALAKEKAPAIIFIDELDAIGTKRFDSEKAGDREVQRTML-E 417
S+ + + G+G K V+ F+LA + AP++IF+DE+D++ +R E G+ E R M E
Sbjct: 1019 SSITSKWFGEGEKYVKAVFSLASKIAPSVIFVDEVDSMLGRR---ENPGEHEAMRKMKNE 1075
Query: 418 LLNQLDGF--SSTADIKVIAATNRVDILDPAL 507
+ DG + V+AATNR LD A+
Sbjct: 1076 FMINWDGLRTKDKERVLVLAATNRPFDLDEAV 1107
>At3g27120.1 68416.m03393 spastin ATPase, putative similar to
SWISS-PROT:Q9QYY8 spastin (Fragment) [Mus musculus];
contains Pfam domain, PF00004: ATPase, AAA family
Length = 287
Score = 61.3 bits (142), Expect = 6e-10
Identities = 29/80 (36%), Positives = 47/80 (58%)
Frame = +2
Query: 11 VDERPTEQYSDIGGLDKQIQELIEAVVLPMTHKEKFVNLGIHPPKGVLLYGPPGTGKTLL 190
+D P ++ DI GL+ + + E V+ P+ + F P KG+LL+GPPGTGKT++
Sbjct: 1 MDRDPNVRWDDIAGLEHAKKCVTEMVIWPLLRPDIFKGCR-SPGKGLLLFGPPGTGKTMI 59
Query: 191 ARACAAQTKSTFLKLAGPQL 250
+A A + K+TF ++ L
Sbjct: 60 GKAIAGEAKATFFYISASSL 79
Score = 61.3 bits (142), Expect = 6e-10
Identities = 37/107 (34%), Positives = 63/107 (58%), Gaps = 2/107 (1%)
Frame = +1
Query: 190 GESLRCSNKVYIFEAGWSTTCAMFIGDGAKLVRDAFALAKEKAPAIIFIDELDAIGTKRF 369
G+++ K F S+ + +IG+G KLVR F +A + PA+IF+DE+D++ ++R
Sbjct: 60 GKAIAGEAKATFFYISASSLTSKWIGEGEKLVRALFGVASCRQPAVIFVDEIDSLLSQR- 118
Query: 370 DSEKAGDREVQRTM-LELLNQLDGFSSTAD-IKVIAATNRVDILDPA 504
+ G+ E R + + L +++GF S ++ I +I ATNR LD A
Sbjct: 119 --KSDGEHESSRRLKTQFLIEMEGFDSGSEQILLIGATNRPQELDEA 163
>At4g02480.1 68417.m00335 AAA-type ATPase family protein contains Pfam
domain, PF00004: ATPase, AAA family; similar to Spastin
(Swiss-Prot:Q9UBP0) [Homo sapiens] and Spastin (Fragment)
(Swiss-Prot:Q9QYY8) [Mus musculus]; similar to
mitochondrial sorting protein 1 (MSP1) protein
(TAT-binding homolog 4) (Swiss-Prot:P28737)
[Saccharomyces cerevisiae]
Length = 1265
Score = 60.9 bits (141), Expect = 8e-10
Identities = 29/69 (42%), Positives = 44/69 (63%), Gaps = 1/69 (1%)
Frame = +2
Query: 35 YSDIGGLDKQIQELIEAVVLPMTHKEKFVNLGI-HPPKGVLLYGPPGTGKTLLARACAAQ 211
+ DIG L+ + L E V+LP+ E F + P KG+LL+GPPGTGKT+LA+A A +
Sbjct: 962 FDDIGALENVKETLKELVMLPLQRPELFDKGQLTKPTKGILLFGPPGTGKTMLAKAVATE 1021
Query: 212 TKSTFLKLA 238
+ F+ ++
Sbjct: 1022 AGANFINIS 1030
Score = 52.0 bits (119), Expect = 4e-07
Identities = 33/92 (35%), Positives = 52/92 (56%), Gaps = 3/92 (3%)
Frame = +1
Query: 241 STTCAMFIGDGAKLVRDAFALAKEKAPAIIFIDELDAIGTKRFDSEKAGDREVQRTML-E 417
S+ + + G+G K V+ F+LA + AP++IF+DE+D++ +R E G+ E R M E
Sbjct: 1032 SSITSKWFGEGEKYVKAVFSLASKIAPSVIFVDEVDSMLGRR---ENPGEHEAMRKMKNE 1088
Query: 418 LLNQLDGF--SSTADIKVIAATNRVDILDPAL 507
+ DG + V+AATNR LD A+
Sbjct: 1089 FMVNWDGLRTKDRERVLVLAATNRPFDLDEAV 1120
>At4g04180.1 68417.m00593 AAA-type ATPase family protein contains
Pfam domain, PF00004: ATPase, AAA family
Length = 609
Score = 57.6 bits (133), Expect = 7e-09
Identities = 36/84 (42%), Positives = 47/84 (55%), Gaps = 1/84 (1%)
Frame = +1
Query: 259 FIGDGAKLVRDAFALAKEKAP-AIIFIDELDAIGTKRFDSEKAGDREVQRTMLELLNQLD 435
+ G+ +L+ F+ A E AIIF+DE+DA R DSE +R + LL Q+D
Sbjct: 401 YYGESERLLGAVFSQANELPDGAIIFLDEIDAFAISR-DSEM--HEATRRVLSVLLRQID 457
Query: 436 GFSSTADIKVIAATNRVDILDPAL 507
GF + VIAATNR LDPAL
Sbjct: 458 GFEQEKKVVVIAATNRKQDLDPAL 481
Score = 36.7 bits (81), Expect = 0.015
Identities = 21/67 (31%), Positives = 36/67 (53%), Gaps = 8/67 (11%)
Frame = +2
Query: 35 YSDIGGLDKQIQELIEAVVLPMTHKEKFVNL--------GIHPPKGVLLYGPPGTGKTLL 190
+ +I G D+Q +E+ + +++ + E + ++ + P+ VL GPPGTGKT
Sbjct: 318 WDNIAGYDQQKREIEDTILMALHSPEVYDDIVRGTRSKFESNRPRAVLFEGPPGTGKTSC 377
Query: 191 ARACAAQ 211
AR A Q
Sbjct: 378 ARVIANQ 384
>At1g62130.1 68414.m07010 AAA-type ATPase family protein contains
Pfam domain, PF00004: ATPase, AAA family
Length = 1025
Score = 51.2 bits (117), Expect = 6e-07
Identities = 26/69 (37%), Positives = 39/69 (56%), Gaps = 1/69 (1%)
Frame = +2
Query: 35 YSDIGGLDKQIQELIEAVVLPMTHKEKFVNLGIHPP-KGVLLYGPPGTGKTLLARACAAQ 211
+ DIG L+ L E V+LP E F + P G+LL+GP GTGKT+LA+A A +
Sbjct: 734 FDDIGALENVKDTLKELVMLPFQWPELFCKGQLTKPCNGILLFGPSGTGKTMLAKAVATE 793
Query: 212 TKSTFLKLA 238
+ + ++
Sbjct: 794 AGANLINMS 802
Score = 33.5 bits (73), Expect = 0.14
Identities = 27/85 (31%), Positives = 42/85 (49%), Gaps = 2/85 (2%)
Frame = +1
Query: 259 FIGDGAKLVRDAFALAKEKAPAIIFIDELDAIGTKRFDSEKAGDREVQRTMLELLNQLDG 438
+ +G K V+ F+LA + +P+IIF+DE+ E R +T E + DG
Sbjct: 806 WFSEGEKYVKAVFSLASKISPSIIFLDEV----------ESMLHRYRLKTKNEFIINWDG 855
Query: 439 FSSTAD--IKVIAATNRVDILDPAL 507
+ + V+AATNR LD A+
Sbjct: 856 LRTNEKERVLVLAATNRPFDLDEAV 880
>At3g04340.1 68416.m00459 FtsH protease family protein similar to
chloroplast FtsH protease [Arabidopsis thaliana]
GI:1483215; contains Pfam profiles PF01434: Peptidase
family M41, PF00004: ATPase AAA family
Length = 960
Score = 45.6 bits (103), Expect = 3e-05
Identities = 24/84 (28%), Positives = 43/84 (51%)
Frame = +1
Query: 256 MFIGDGAKLVRDAFALAKEKAPAIIFIDELDAIGTKRFDSEKAGDREVQRTMLELLNQLD 435
+++G A VR+ F A++ AP IIF+++ D R ++ + + +LL +LD
Sbjct: 497 LWVGQSAANVRELFQTARDLAPVIIFVEDFDLFAGVRGKFVHTKQQDHESFINQLLVELD 556
Query: 436 GFSSTADIKVIAATNRVDILDPAL 507
GF + ++A T +D AL
Sbjct: 557 GFEKQDGVVLMATTRNHKQIDEAL 580
Score = 43.2 bits (97), Expect = 2e-04
Identities = 22/64 (34%), Positives = 36/64 (56%)
Frame = +2
Query: 59 KQIQELIEAVVLPMTHKEKFVNLGIHPPKGVLLYGPPGTGKTLLARACAAQTKSTFLKLA 238
+ ++E I VV + + + F +G P+GVL+ G GTGKT LA A AA+ + + +
Sbjct: 430 ESMREEINEVVAFLQNPKAFQEMGARAPRGVLIVGERGTGKTSLALAIAAEARVPVVNVE 489
Query: 239 GPQL 250
+L
Sbjct: 490 AQEL 493
>At4g04910.1 68417.m00714 AAA-type ATPase family protein similar to
SP|P18708 Vesicular-fusion protein NSF
(N-ethylmaleimide-sensitive fusion protein)
(NEM-sensitive fusion protein) {Cricetulus griseus};
contains Pfam profiles PF00004: ATPase AAA family,
PF02359: Cell division protein 48 (CDC48) N-terminal
domain; contains non-consensus AT-AC splice sites at
intron 2
Length = 742
Score = 44.8 bits (101), Expect = 6e-05
Identities = 31/91 (34%), Positives = 47/91 (51%), Gaps = 8/91 (8%)
Frame = +1
Query: 259 FIGDGAKLVRDAFALAKEKAPA--------IIFIDELDAIGTKRFDSEKAGDREVQRTML 414
F+G+ K VRD FA A++ +I DE+DAI R S + G +
Sbjct: 291 FVGETEKNVRDLFADAEQDQRTLGDASELHVIIFDEIDAICKSR-GSTRDGTGVHDSIVN 349
Query: 415 ELLNQLDGFSSTADIKVIAATNRVDILDPAL 507
+LL ++DG + ++ +I TNR D+LD AL
Sbjct: 350 QLLTKIDGVEALNNVLLIGMTNRKDLLDEAL 380
Score = 44.0 bits (99), Expect = 1e-04
Identities = 25/72 (34%), Positives = 36/72 (50%), Gaps = 2/72 (2%)
Frame = +2
Query: 44 IGGLDKQIQELIEAVVLPMTHKEKFVN-LGIHPPKGVLLYGPPGTGKTLLARACAAQTKS 220
IGGL + ++ + LGI KG+LL+GPPGTGKTL+AR
Sbjct: 217 IGGLGAEFADIFRRAFASRVFPPHVTSRLGIKHVKGMLLFGPPGTGKTLMARQIGKMLNG 276
Query: 221 TFLKLA-GPQLV 253
K+ GP+++
Sbjct: 277 KDPKIVNGPEVL 288
Score = 41.1 bits (92), Expect = 7e-04
Identities = 20/55 (36%), Positives = 33/55 (60%), Gaps = 4/55 (7%)
Frame = +3
Query: 510 RSGRLDRKIEFPHPNEEARARIMQIHSRKMN----VSPDVNFEELSRSTDDFQWA 662
R GRL+ ++E P+E R +I+QIH+ KM + D+N +EL+ T ++ A
Sbjct: 382 RPGRLEVQVEISLPDEAGRLQILQIHTNKMKENSFLGTDINLQELAARTKNYSGA 436
>At1g79560.1 68414.m09275 FtsH protease, putative contains
similarity to chloroplast FtsH protease GI:5804782 from
[Nicotiana tabacum]
Length = 1008
Score = 44.8 bits (101), Expect = 6e-05
Identities = 28/81 (34%), Positives = 42/81 (51%), Gaps = 5/81 (6%)
Frame = +1
Query: 271 GAKLVRDAFALAKEKAPAIIFIDELDAIGTK--RFDSEKAGDREVQRTMLELLNQ---LD 435
GA + + F++A+ APA +F+DE+DAI + R D + E L+ + +D
Sbjct: 569 GAAKINEMFSIARRNAPAFVFVDEIDAIAGRHARKDPRRRATFEALIAQLDGEKEKTGID 628
Query: 436 GFSSTADIKVIAATNRVDILD 498
FS + I ATNR D LD
Sbjct: 629 RFSLRQAVIFICATNRPDELD 649
Score = 43.2 bits (97), Expect = 2e-04
Identities = 21/65 (32%), Positives = 38/65 (58%)
Frame = +2
Query: 53 LDKQIQELIEAVVLPMTHKEKFVNLGIHPPKGVLLYGPPGTGKTLLARACAAQTKSTFLK 232
L + +L++ +++ M + ++ + +GVLL GPPGTGKTL AR A ++ F+
Sbjct: 497 LGGDVWDLLDELMIYMGNPMQYYEKDVAFVRGVLLSGPPGTGKTLFARTLAKESGLPFVF 556
Query: 233 LAGPQ 247
+G +
Sbjct: 557 ASGAE 561
Score = 38.3 bits (85), Expect = 0.005
Identities = 18/51 (35%), Positives = 30/51 (58%)
Frame = +3
Query: 510 RSGRLDRKIEFPHPNEEARARIMQIHSRKMNVSPDVNFEELSRSTDDFQWA 662
RSGR+DR++ P+ + R +I +HS N++ D++F +L T F A
Sbjct: 654 RSGRIDRRLYIGLPDAKQRVQIFGVHSAGKNLAEDIDFGKLVFRTVGFSGA 704
>At5g16930.1 68418.m01984 AAA-type ATPase family protein contains
Pfam domain, PF00004: ATPase, AAA family
Length = 644
Score = 40.3 bits (90), Expect = 0.001
Identities = 22/63 (34%), Positives = 33/63 (52%)
Frame = +2
Query: 53 LDKQIQELIEAVVLPMTHKEKFVNLGIHPPKGVLLYGPPGTGKTLLARACAAQTKSTFLK 232
L+K+I++L A H+ F N +L YGPPGTGKT+ AR A ++ +
Sbjct: 377 LEKRIEQLANATANTKAHQAPFRN--------ILFYGPPGTGKTMAARELARRSGLDYAL 428
Query: 233 LAG 241
+ G
Sbjct: 429 MTG 431
Score = 29.1 bits (62), Expect = 2.9
Identities = 11/30 (36%), Positives = 19/30 (63%)
Frame = +3
Query: 507 ARSGRLDRKIEFPHPNEEARARIMQIHSRK 596
A + R+D +EFP P EE R +++ ++ K
Sbjct: 515 AVADRIDETLEFPLPGEEERFKLLNLYLEK 544
>At2g18330.1 68415.m02136 AAA-type ATPase family protein contains
Pfam profile: PF00004 ATPase family associated with
various cellular activities (AAA)
Length = 636
Score = 40.3 bits (90), Expect = 0.001
Identities = 24/75 (32%), Positives = 36/75 (48%)
Frame = +2
Query: 17 ERPTEQYSDIGGLDKQIQELIEAVVLPMTHKEKFVNLGIHPPKGVLLYGPPGTGKTLLAR 196
E+P E L +I+ L A +HK F N+ + YGPPGTGKT++AR
Sbjct: 352 EKPLENVILHRSLKTRIERLARATANTKSHKAPFRNM--------MFYGPPGTGKTMVAR 403
Query: 197 ACAAQTKSTFLKLAG 241
A ++ + + G
Sbjct: 404 EIARKSGLDYAMMTG 418
Score = 31.1 bits (67), Expect = 0.73
Identities = 14/41 (34%), Positives = 24/41 (58%)
Frame = +3
Query: 507 ARSGRLDRKIEFPHPNEEARARIMQIHSRKMNVSPDVNFEE 629
A + R+D IEFP P EE R ++++++ K + D E+
Sbjct: 502 AVTDRIDEVIEFPLPGEEERFKLLKLYLNKYLMGDDKKGEK 542
>At5g40000.1 68418.m04851 AAA-type ATPase family protein BCS1
nuclear gene encoding mitochondrial protein - Homo
sapiens, EMBL:AF026849 contains Pfam profile: ATPase
family PF00004
Length = 470
Score = 39.1 bits (87), Expect = 0.003
Identities = 18/49 (36%), Positives = 29/49 (59%)
Frame = +2
Query: 59 KQIQELIEAVVLPMTHKEKFVNLGIHPPKGVLLYGPPGTGKTLLARACA 205
K+ +E++ ++ KE + +G +G LLYGPPGTGK+ + A A
Sbjct: 214 KKKEEIVNDLIAFSNGKEYYKKIGKAWKRGYLLYGPPGTGKSTMISAMA 262
>At4g36580.1 68417.m05193 AAA-type ATPase family protein contains
Pfam domain, PF00004: ATPase, AAA family ('A'TPases
'A'ssociated with diverse cellular 'A'ctivities)
Length = 620
Score = 38.7 bits (86), Expect = 0.004
Identities = 21/63 (33%), Positives = 33/63 (52%)
Frame = +2
Query: 53 LDKQIQELIEAVVLPMTHKEKFVNLGIHPPKGVLLYGPPGTGKTLLARACAAQTKSTFLK 232
L K+I+ L A +H+ F N+ + YGPPGTGKT++AR A ++ +
Sbjct: 349 LKKRIERLARATANTKSHQAPFRNM--------MFYGPPGTGKTMVAREIARKSGLDYAM 400
Query: 233 LAG 241
+ G
Sbjct: 401 MTG 403
Score = 29.5 bits (63), Expect = 2.2
Identities = 12/30 (40%), Positives = 19/30 (63%)
Frame = +3
Query: 507 ARSGRLDRKIEFPHPNEEARARIMQIHSRK 596
A + R+D IEFP P EE R +++ ++ K
Sbjct: 487 AVTDRIDEVIEFPLPGEEERFKLLNLYLNK 516
>At5g17760.2 68418.m02083 AAA-type ATPase family protein contains
Pfam profile: ATPase family PF00004
Length = 341
Score = 37.1 bits (82), Expect = 0.011
Identities = 20/50 (40%), Positives = 29/50 (58%)
Frame = +2
Query: 68 QELIEAVVLPMTHKEKFVNLGIHPPKGVLLYGPPGTGKTLLARACAAQTK 217
+++IE + + KE + +G +G LLYGPPGTGK+ L A A K
Sbjct: 229 RDVIEDLDRFIRRKEFYKRVGKAWKRGYLLYGPPGTGKSSLVAAMANYLK 278
>At5g17760.1 68418.m02082 AAA-type ATPase family protein contains
Pfam profile: ATPase family PF00004
Length = 505
Score = 37.1 bits (82), Expect = 0.011
Identities = 20/50 (40%), Positives = 29/50 (58%)
Frame = +2
Query: 68 QELIEAVVLPMTHKEKFVNLGIHPPKGVLLYGPPGTGKTLLARACAAQTK 217
+++IE + + KE + +G +G LLYGPPGTGK+ L A A K
Sbjct: 229 RDVIEDLDRFIRRKEFYKRVGKAWKRGYLLYGPPGTGKSSLVAAMANYLK 278
>At3g28570.1 68416.m03567 AAA-type ATPase family protein contains
Pfam profile: ATPase family PF00004
Length = 451
Score = 36.7 bits (81), Expect = 0.015
Identities = 20/51 (39%), Positives = 29/51 (56%)
Frame = +2
Query: 53 LDKQIQELIEAVVLPMTHKEKFVNLGIHPPKGVLLYGPPGTGKTLLARACA 205
+DK+ E+ +V KE + +G +G LLYGPPGTGK+ + A A
Sbjct: 208 IDKK-DEIFRDLVAFRDGKEYYDRIGKAWKRGYLLYGPPGTGKSTMIAAMA 257
>At3g03060.1 68416.m00302 AAA-type ATPase family protein contains a
ATP/GTP-binding site motif A (P-loop), PROSITE:PS00017
Length = 639
Score = 36.7 bits (81), Expect = 0.015
Identities = 15/35 (42%), Positives = 23/35 (65%)
Frame = +2
Query: 137 PPKGVLLYGPPGTGKTLLARACAAQTKSTFLKLAG 241
P + +LL+GPPGTGKT+ AR A ++ + + G
Sbjct: 396 PFRNILLHGPPGTGKTMAARELARKSGLDYALMTG 430
Score = 28.3 bits (60), Expect = 5.1
Identities = 11/30 (36%), Positives = 19/30 (63%)
Frame = +3
Query: 507 ARSGRLDRKIEFPHPNEEARARIMQIHSRK 596
A + R+D +EFP P EE R +++ ++ K
Sbjct: 514 AVADRVDEVLEFPLPGEEERFKLLNLYLEK 543
>At5g17730.1 68418.m02079 AAA-type ATPase family protein contains
Pfam profile: ATPase family PF00004
Length = 470
Score = 36.3 bits (80), Expect = 0.019
Identities = 18/37 (48%), Positives = 22/37 (59%)
Frame = +2
Query: 107 KEKFVNLGIHPPKGVLLYGPPGTGKTLLARACAAQTK 217
K+ + +G +G LLYGPPGTGKT L A A K
Sbjct: 234 KDFYKRVGKPWKRGYLLYGPPGTGKTSLVAAIANYLK 270
>At2g18193.1 68415.m02117 AAA-type ATPase family protein contains
Pfam profile: ATPase family PF00004
Length = 495
Score = 36.3 bits (80), Expect = 0.019
Identities = 19/50 (38%), Positives = 29/50 (58%)
Frame = +2
Query: 68 QELIEAVVLPMTHKEKFVNLGIHPPKGVLLYGPPGTGKTLLARACAAQTK 217
+++I+ + + KE + +G +G LLYGPPGTGK+ L A A K
Sbjct: 219 KKIIDDLERFLKRKEFYKRVGKAWKRGYLLYGPPGTGKSSLIAAMANYLK 268
>At1g43910.1 68414.m05066 AAA-type ATPase family protein contains
Pfam profile: ATPase family PF00004
Length = 475
Score = 35.9 bits (79), Expect = 0.025
Identities = 17/37 (45%), Positives = 23/37 (62%)
Frame = +2
Query: 107 KEKFVNLGIHPPKGVLLYGPPGTGKTLLARACAAQTK 217
K+ F ++G +G LLYGPPGTGK+ + A A K
Sbjct: 228 KDFFKSVGRAWKRGYLLYGPPGTGKSSMVAAIANHMK 264
>At4g05380.1 68417.m00820 AAA-type ATPase family protein contains
similarity to mitochondrial ATPase (AAA family) Bcs1p,
Saccharomyces cerevisiae, Swiss Prot:P32839
Length = 248
Score = 35.5 bits (78), Expect = 0.034
Identities = 17/33 (51%), Positives = 21/33 (63%)
Frame = +2
Query: 107 KEKFVNLGIHPPKGVLLYGPPGTGKTLLARACA 205
K+ F +G +G LLYGPPGTGK+ L A A
Sbjct: 20 KDFFKTVGRAWKRGYLLYGPPGTGKSSLVAAIA 52
>At3g28600.1 68416.m03570 AAA-type ATPase family protein contains
Pfam profile: ATPase family PF00004
Length = 475
Score = 35.5 bits (78), Expect = 0.034
Identities = 17/49 (34%), Positives = 28/49 (57%)
Frame = +2
Query: 59 KQIQELIEAVVLPMTHKEKFVNLGIHPPKGVLLYGPPGTGKTLLARACA 205
K+ +E++ + KE + +G +G LL+GPPGTGK+ + A A
Sbjct: 209 KKKEEILNDLAAFSNGKEYYKKIGKAWKRGYLLHGPPGTGKSTMIAAMA 257
>At5g17740.1 68418.m02080 AAA-type ATPase family protein h-bcs1,
Homo sapiens, EMBL:AF026849 h-bcs1, Homo sapiens,
EMBL:AF026849 h-bcs1, Homo sapiens, EMBL:AF026849
contains Pfam profile: ATPase family PF00004
gene_id:K17E7.100 contains Pfam profile: ATPase family
PF00004
Length = 533
Score = 35.1 bits (77), Expect = 0.045
Identities = 19/50 (38%), Positives = 28/50 (56%)
Frame = +2
Query: 68 QELIEAVVLPMTHKEKFVNLGIHPPKGVLLYGPPGTGKTLLARACAAQTK 217
+ +IE + + K+ + +G +G LLYGPPGTGK+ L A A K
Sbjct: 221 RSMIEDLDRFVGRKDFYKRVGKAWKRGYLLYGPPGTGKSSLVAAMANYLK 270
>At2g18190.1 68415.m02116 AAA-type ATPase family protein contains
Pfam profile: ATPase family PF00004
Length = 494
Score = 35.1 bits (77), Expect = 0.045
Identities = 18/50 (36%), Positives = 29/50 (58%)
Frame = +2
Query: 68 QELIEAVVLPMTHKEKFVNLGIHPPKGVLLYGPPGTGKTLLARACAAQTK 217
+++I+ + + +E + +G +G LLYGPPGTGK+ L A A K
Sbjct: 220 KKIIDDMERFLKRREFYKRVGKAWKRGYLLYGPPGTGKSSLIAAMANYLK 269
>At3g50940.1 68416.m05577 AAA-type ATPase family protein contains
Pfam profile: ATPase family PF00004
Length = 451
Score = 34.7 bits (76), Expect = 0.059
Identities = 20/52 (38%), Positives = 31/52 (59%), Gaps = 1/52 (1%)
Frame = +2
Query: 53 LDKQIQE-LIEAVVLPMTHKEKFVNLGIHPPKGVLLYGPPGTGKTLLARACA 205
LD ++++ L+E + + K + +G +G LLYGPPGTGK+ L A A
Sbjct: 217 LDPEVKKNLVEDLDRFVQRKGFYGRVGKAWKRGYLLYGPPGTGKSSLIAAIA 268
>At3g28610.1 68416.m03571 AAA-type ATPase family protein contains
Pfam profile: ATPase family PF00004
Length = 473
Score = 34.7 bits (76), Expect = 0.059
Identities = 16/49 (32%), Positives = 28/49 (57%)
Frame = +2
Query: 59 KQIQELIEAVVLPMTHKEKFVNLGIHPPKGVLLYGPPGTGKTLLARACA 205
K+ ++++ + K+ + +G +G LLYGPPGTGK+ + A A
Sbjct: 209 KKKEQILNDLAAFNNGKDYYKKIGKAWKRGYLLYGPPGTGKSTMIAAMA 257
>At3g24530.1 68416.m03080 AAA-type ATPase family protein / ankyrin
repeat family protein contains Pfam profiles: PF00023
ankyrin repeat, PF00004 ATPase family associated with
various cellular activities (AAA)
Length = 481
Score = 34.3 bits (75), Expect = 0.078
Identities = 18/59 (30%), Positives = 34/59 (57%), Gaps = 3/59 (5%)
Frame = +2
Query: 29 EQYSDIGGLDK---QIQELIEAVVLPMTHKEKFVNLGIHPPKGVLLYGPPGTGKTLLAR 196
++ S+I GL + Q+++ + ++L + +N+G P + G PGTGKT++AR
Sbjct: 205 DELSNIVGLSELKTQLRKWAKGMLLDERRRALGLNIGTRRPPHMAFLGNPGTGKTMVAR 263
>At5g40010.1 68418.m04852 AAA-type ATPase family protein contains
Pfam profile: ATPase family PF00004
Length = 514
Score = 33.9 bits (74), Expect = 0.10
Identities = 16/49 (32%), Positives = 28/49 (57%)
Frame = +2
Query: 59 KQIQELIEAVVLPMTHKEKFVNLGIHPPKGVLLYGPPGTGKTLLARACA 205
K+ +E+ ++ K+ + +G +G LL+GPPGTGK+ + A A
Sbjct: 216 KKKEEIKNDLIKFSNSKDYYKKIGKAWKRGYLLFGPPGTGKSTMIAAMA 264
>At3g28540.1 68416.m03564 AAA-type ATPase family protein contains
Pfam profile: ATPase family PF00004
Length = 510
Score = 33.9 bits (74), Expect = 0.10
Identities = 20/43 (46%), Positives = 29/43 (67%), Gaps = 2/43 (4%)
Frame = +1
Query: 385 GDREVQRTMLELLNQLDG-FSSTADIKVIA-ATNRVDILDPAL 507
G+RE + T+ LLN +DG +S+ + K+I TN +D LDPAL
Sbjct: 337 GERESKVTLSGLLNAIDGLWSACSGEKIIVFTTNYLDKLDPAL 379
Score = 31.9 bits (69), Expect = 0.41
Identities = 14/33 (42%), Positives = 21/33 (63%)
Frame = +2
Query: 107 KEKFVNLGIHPPKGVLLYGPPGTGKTLLARACA 205
K+ + +G +G LL+GPPGTGK+ + A A
Sbjct: 228 KDYYRKVGKPWKRGYLLFGPPGTGKSTMISAMA 260
>At3g28520.1 68416.m03562 AAA-type ATPase family protein contains
Pfam profile: ATPase family PF00004
Length = 478
Score = 33.9 bits (74), Expect = 0.10
Identities = 19/53 (35%), Positives = 29/53 (54%), Gaps = 1/53 (1%)
Frame = +2
Query: 50 GLDKQIQELIEAVVLPMTHKEKFVNLGIHPPK-GVLLYGPPGTGKTLLARACA 205
G+D +E I+ ++ T + + P K G LL+GPPGTGK+ + A A
Sbjct: 197 GMDLDKKEEIKKDLIKFTKGKDYYRKVAKPWKRGYLLFGPPGTGKSTMISAIA 249
>At1g08270.2 68414.m00912 expressed protein low similarity to
SP|P46467 SKD1 protein (Vacuolar sorting protein 4b)
{Mus musculus}
Length = 132
Score = 33.9 bits (74), Expect = 0.10
Identities = 15/47 (31%), Positives = 27/47 (57%)
Frame = +2
Query: 11 VDERPTEQYSDIGGLDKQIQELIEAVVLPMTHKEKFVNLGIHPPKGV 151
+ E+P +++ + GL+ Q L EAV+LP+ + F I+ P+ V
Sbjct: 84 IREKPNVKWTVVAGLESAKQALKEAVILPVNFPQFFTARAIYDPRDV 130
>At4g31860.2 68417.m04527 protein phosphatase 2C, putative / PP2C,
putative protein phosphatase 2C, Schizosaccharomyces
pombe, PIR2:S54297
Length = 275
Score = 33.5 bits (73), Expect = 0.14
Identities = 15/36 (41%), Positives = 23/36 (63%)
Frame = +3
Query: 144 KEFFYMDLLVQGRHCWRELALLKQSLHF*SWLVHNL 251
K FF MD ++QG+ WRELA+L ++ S ++ L
Sbjct: 93 KAFFRMDEMMQGQRGWRELAVLGDKINKFSGMIEGL 128
>At4g31860.1 68417.m04526 protein phosphatase 2C, putative / PP2C,
putative protein phosphatase 2C, Schizosaccharomyces
pombe, PIR2:S54297
Length = 357
Score = 33.5 bits (73), Expect = 0.14
Identities = 15/36 (41%), Positives = 23/36 (63%)
Frame = +3
Query: 144 KEFFYMDLLVQGRHCWRELALLKQSLHF*SWLVHNL 251
K FF MD ++QG+ WRELA+L ++ S ++ L
Sbjct: 93 KAFFRMDEMMQGQRGWRELAVLGDKINKFSGMIEGL 128
>At3g28510.1 68416.m03561 AAA-type ATPase family protein contains
Pfam profile: PF00004 ATPase family
Length = 530
Score = 33.5 bits (73), Expect = 0.14
Identities = 20/45 (44%), Positives = 29/45 (64%), Gaps = 2/45 (4%)
Frame = +1
Query: 379 KAGDREVQRTMLELLNQLDG-FSSTADIKVIA-ATNRVDILDPAL 507
K D++ + T+ LLN +DG +S+ + K+I TN VD LDPAL
Sbjct: 336 KVDDKQSKVTLSGLLNSIDGLWSACSGEKIIVFTTNFVDKLDPAL 380
Score = 32.3 bits (70), Expect = 0.31
Identities = 14/33 (42%), Positives = 21/33 (63%)
Frame = +2
Query: 107 KEKFVNLGIHPPKGVLLYGPPGTGKTLLARACA 205
K+ + +G +G LL+GPPGTGK+ + A A
Sbjct: 232 KDYYKKVGKPWKRGYLLFGPPGTGKSTMIAAIA 264
>At1g56510.1 68414.m06498 disease resistance protein (TIR-NBS-LRR
class), putative domain signature TIR-NBS-LRR exists,
suggestive of a disease resistance protein.
Length = 1007
Score = 33.5 bits (73), Expect = 0.14
Identities = 21/74 (28%), Positives = 39/74 (52%)
Frame = +2
Query: 5 TRVDERPTEQYSDIGGLDKQIQELIEAVVLPMTHKEKFVNLGIHPPKGVLLYGPPGTGKT 184
T+++ P + D+ GL++ ++E++ + L KE +GI GP G GK+
Sbjct: 173 TKINVTPCRDFDDMVGLERHLKEMVSLLDLD---KEGVKMVGIS--------GPAGIGKS 221
Query: 185 LLARACAAQTKSTF 226
+A+A ++ STF
Sbjct: 222 TIAKALHSRHSSTF 235
>At1g06720.1 68414.m00714 expressed protein contains Pfam domain,
PF04950: Protein of unknown function (DUF663)
Length = 1147
Score = 33.5 bits (73), Expect = 0.14
Identities = 16/42 (38%), Positives = 25/42 (59%), Gaps = 1/42 (2%)
Frame = +2
Query: 122 NLGIHPPKGVLLYGPPGTGKTLLARACAAQ-TKSTFLKLAGP 244
N G PP V++ GPPG GK+L+ ++ + TK ++ GP
Sbjct: 77 NYGEAPPFVVVVQGPPGVGKSLVIKSLVKEFTKQNVPEVRGP 118
>At1g01570.1 68414.m00074 fringe-related protein + similar to
hypothetical protein GB:AAC23643 [Arabidopsis thaliana]
+ weak similarity to Fringe [Schistocerca
gregaria](GI:6573138);Fringe encodes an extracellular
protein that regulates Notch signalling.
Length = 478
Score = 33.5 bits (73), Expect = 0.14
Identities = 15/64 (23%), Positives = 31/64 (48%)
Frame = +1
Query: 391 REVQRTMLELLNQLDGFSSTADIKVIAATNRVDILDPALPDLDVWTEKSNFLIPMKKPEP 570
+EV ++L +L G S + + + + +D++DP P++ F++P K P
Sbjct: 252 KEVGFHQIDLYGKLLGLLSAHPLAPLVSIHHLDLVDPVFPNMGRVNAMRRFMVPAKLDSP 311
Query: 571 ELCR 582
L +
Sbjct: 312 SLAQ 315
>At4g30250.1 68417.m04301 AAA-type ATPase family protein contains
Pfam profile: ATPase family PF00004
Length = 512
Score = 33.1 bits (72), Expect = 0.18
Identities = 14/21 (66%), Positives = 16/21 (76%)
Frame = +2
Query: 143 KGVLLYGPPGTGKTLLARACA 205
+G LLYGPPGTGK+ L A A
Sbjct: 239 RGYLLYGPPGTGKSSLIAAMA 259
>At3g50930.1 68416.m05576 AAA-type ATPase family protein contains
Pfam profile: ATPase family PF00004
Length = 576
Score = 33.1 bits (72), Expect = 0.18
Identities = 14/21 (66%), Positives = 16/21 (76%)
Frame = +2
Query: 143 KGVLLYGPPGTGKTLLARACA 205
+G LLYGPPGTGK+ L A A
Sbjct: 300 RGYLLYGPPGTGKSSLIAAMA 320
>At4g24710.1 68417.m03536 AAA-type ATPase family protein similar to
HPV16 E1 protein binding protein [Homo sapiens]
gi|2232019|gb|AAB64095; contains Pfam domain, PF00004:
ATPase, AAA family ('A'TPases 'A'ssociated with diverse
cellular 'A'ctivities)
Length = 467
Score = 32.7 bits (71), Expect = 0.24
Identities = 13/19 (68%), Positives = 16/19 (84%)
Frame = +2
Query: 149 VLLYGPPGTGKTLLARACA 205
+LL+GPPGTGKT L +A A
Sbjct: 205 ILLHGPPGTGKTSLCKALA 223
>At3g28580.1 68416.m03568 AAA-type ATPase family protein contains
Pfam profile: ATPase family PF00004
Length = 500
Score = 32.7 bits (71), Expect = 0.24
Identities = 14/33 (42%), Positives = 21/33 (63%)
Frame = +2
Query: 107 KEKFVNLGIHPPKGVLLYGPPGTGKTLLARACA 205
K+ + +G +G LL+GPPGTGK+ + A A
Sbjct: 229 KDYYKKIGKAWKRGYLLFGPPGTGKSTMIAAMA 261
Score = 31.5 bits (68), Expect = 0.55
Identities = 20/59 (33%), Positives = 31/59 (52%), Gaps = 2/59 (3%)
Frame = +1
Query: 337 DELDAIGTKRFDSEKAGDREVQRTMLELLNQLDGFSST--ADIKVIAATNRVDILDPAL 507
D+ + I K + ++E + T+ LLN +DG S + ++ TN VD LDPAL
Sbjct: 321 DDKNTIEKKMMMKNEGENKESKVTLSGLLNFIDGLWSACGGERIIVFTTNFVDKLDPAL 379
>At5g57480.1 68418.m07183 AAA-type ATPase family protein contains
Pfam profile: PF00004 ATPase family
Length = 520
Score = 32.3 bits (70), Expect = 0.31
Identities = 13/21 (61%), Positives = 16/21 (76%)
Frame = +2
Query: 143 KGVLLYGPPGTGKTLLARACA 205
+G LLYGPPGTGK+ + A A
Sbjct: 238 RGYLLYGPPGTGKSSMIAAMA 258
>At4g25835.1 68417.m03716 AAA-type ATPase family protein contains
Pfam profile: PF00004 ATPase family
Length = 506
Score = 32.3 bits (70), Expect = 0.31
Identities = 13/21 (61%), Positives = 16/21 (76%)
Frame = +2
Query: 143 KGVLLYGPPGTGKTLLARACA 205
+G LLYGPPGTGK+ + A A
Sbjct: 238 RGYLLYGPPGTGKSSMIAAMA 258
>At1g67120.1 68414.m07636 midasin-related similar to Midasin
(MIDAS-containing protein) (Swiss-Prot:Q12019)
[Saccharomyces cerevisiae]; similar to Midasin
(MIDAS-containing protein) (Swiss-Prot:Q9NU22) [Homo
sapiens]; contains Prosite PS00017: ATP/GTP-binding site
motif A (P-loop)
Length = 5336
Score = 32.3 bits (70), Expect = 0.31
Identities = 14/34 (41%), Positives = 22/34 (64%)
Frame = +2
Query: 113 KFVNLGIHPPKGVLLYGPPGTGKTLLARACAAQT 214
+ V+L + + VLLYGP G+GK+ L R A ++
Sbjct: 344 EMVSLAVSQKRPVLLYGPSGSGKSALIRKLADES 377
Score = 28.7 bits (61), Expect = 3.9
Identities = 21/82 (25%), Positives = 43/82 (52%), Gaps = 4/82 (4%)
Frame = +2
Query: 2 GTRVDERPTEQY-SDI-GGLDKQIQELIE--AVVLPMTHKEKFVNLGIHPPKGVLLYGPP 169
G + +P ++Y ++ G DK + ++ +V+ + H + + +P VLL GP
Sbjct: 1025 GENIRSQPLQRYLGELKGSSDKFVGSYVKTKSVIDHLNHLAHAIFIKRYP---VLLQGPT 1081
Query: 170 GTGKTLLARACAAQTKSTFLKL 235
+GKT L + AA + + F+++
Sbjct: 1082 SSGKTSLVKYLAAISGNKFVRI 1103
>At5g22330.1 68418.m02605 TATA box-binding protein-interacting
protein-related similar to TATA box-binding
protein-interacting protein SP:O35753 from [ Mus
musculus]
Length = 458
Score = 31.9 bits (69), Expect = 0.41
Identities = 16/38 (42%), Positives = 23/38 (60%), Gaps = 2/38 (5%)
Frame = +2
Query: 143 KGVLLYGPPGTGKTLLARACAAQ--TKSTFLKLAGPQL 250
K +LL GPPGTGKT LA + + +K F + G ++
Sbjct: 67 KALLLAGPPGTGKTALALGISQELGSKVPFCPMVGSEV 104
>At2g36380.1 68415.m04464 ABC transporter family protein related to
multi drug resistance proteins and P-glycoproteins
Length = 1453
Score = 31.9 bits (69), Expect = 0.41
Identities = 16/37 (43%), Positives = 23/37 (62%)
Frame = +2
Query: 131 IHPPKGVLLYGPPGTGKTLLARACAAQTKSTFLKLAG 241
I P + LL GPP +GKT L +A A + T L+++G
Sbjct: 196 IKPSRMTLLLGPPSSGKTTLLQALAGKLDDT-LQMSG 231
>At1g21690.2 68414.m02715 replication factor C 37 kDa, putative
Similar to SWISS-PROT:P35249 activator 1 37 kDa subunit
(Replication factor C 37 kDa subunit, A1 37 kDa subunit,
RF-C 37 kDa subunit, RFC37) [Homo sapiens]; contains
Pfam domain, PF00004: ATPase, AAA family
Length = 327
Score = 31.9 bits (69), Expect = 0.41
Identities = 14/21 (66%), Positives = 15/21 (71%)
Frame = +2
Query: 149 VLLYGPPGTGKTLLARACAAQ 211
+L YGPPGTGKT A A A Q
Sbjct: 33 MLFYGPPGTGKTTTALAIAHQ 53
>At1g21690.1 68414.m02714 replication factor C 37 kDa, putative
Similar to SWISS-PROT:P35249 activator 1 37 kDa subunit
(Replication factor C 37 kDa subunit, A1 37 kDa subunit,
RF-C 37 kDa subunit, RFC37) [Homo sapiens]; contains
Pfam domain, PF00004: ATPase, AAA family
Length = 339
Score = 31.9 bits (69), Expect = 0.41
Identities = 14/21 (66%), Positives = 15/21 (71%)
Frame = +2
Query: 149 VLLYGPPGTGKTLLARACAAQ 211
+L YGPPGTGKT A A A Q
Sbjct: 45 MLFYGPPGTGKTTTALAIAHQ 65
>At3g30842.1 68416.m03968 ABC transporter protein, putative similar
to pleiotropic drug resistance like protein [Nicotiana
tabacum] GI:20522008, ABC1 protein [Nicotiana
plumbaginifolia] GI:14331118; contains Pfam profile
PF00005: ABC transporter
Length = 1406
Score = 31.5 bits (68), Expect = 0.55
Identities = 13/30 (43%), Positives = 21/30 (70%)
Frame = +2
Query: 131 IHPPKGVLLYGPPGTGKTLLARACAAQTKS 220
I P + LL GPPG+GK+ L +A + +T++
Sbjct: 169 IKPGRLTLLLGPPGSGKSTLLKALSGKTET 198
>At3g04210.1 68416.m00445 disease resistance protein (TIR-NBS
class), putative domain signature TIR-NBS exists,
suggestive of a disease resistance protein.
Length = 531
Score = 31.5 bits (68), Expect = 0.55
Identities = 17/68 (25%), Positives = 36/68 (52%)
Frame = +2
Query: 23 PTEQYSDIGGLDKQIQELIEAVVLPMTHKEKFVNLGIHPPKGVLLYGPPGTGKTLLARAC 202
P+ +SD+ G++ +++L E+ + L ++ + + ++GPPG GKT +AR
Sbjct: 233 PSSDFSDLVGMEDHMKKL-----------ERMLYLDLNDVRMIGIWGPPGIGKTSIARVL 281
Query: 203 AAQTKSTF 226
+ +F
Sbjct: 282 FRKHSDSF 289
>At1g66950.1 68414.m07612 ABC transporter family protein similar to
PDR5-like ABC transporter GI:1514643 from [Spirodela
polyrhiza]
Length = 1454
Score = 31.5 bits (68), Expect = 0.55
Identities = 15/37 (40%), Positives = 23/37 (62%)
Frame = +2
Query: 131 IHPPKGVLLYGPPGTGKTLLARACAAQTKSTFLKLAG 241
+ P + LL GPP +GKT L +A A + T L+++G
Sbjct: 198 VKPSRMTLLLGPPSSGKTTLLQALAGKLDDT-LQMSG 233
>At5g17750.1 68418.m02081 AAA-type ATPase family protein contains
Pfam profile: ATPase family PF00004
Length = 392
Score = 31.1 bits (67), Expect = 0.73
Identities = 15/37 (40%), Positives = 20/37 (54%)
Frame = +2
Query: 107 KEKFVNLGIHPPKGVLLYGPPGTGKTLLARACAAQTK 217
K+ + +G + LYGPPGTGK+ L A A K
Sbjct: 209 KDYYKRVGKAWKRSYFLYGPPGTGKSSLVAAMANYLK 245
Score = 29.9 bits (64), Expect = 1.7
Identities = 18/36 (50%), Positives = 24/36 (66%), Gaps = 2/36 (5%)
Frame = +1
Query: 406 TMLELLNQLDG-FSSTADIK-VIAATNRVDILDPAL 507
T+ LLN +DG +SS D + VI TN ++LDPAL
Sbjct: 307 TLSGLLNCIDGLWSSCGDERIVIFTTNNKEVLDPAL 342
>At4g28070.1 68417.m04026 AFG1-like ATPase family protein contains
Pfam profile: PF03969 AFG1-like ATPase
Length = 464
Score = 31.1 bits (67), Expect = 0.73
Identities = 15/27 (55%), Positives = 19/27 (70%), Gaps = 1/27 (3%)
Frame = +2
Query: 113 KFVN-LGIHPPKGVLLYGPPGTGKTLL 190
KFV+ + P KG+ LYG GTGKT+L
Sbjct: 123 KFVSHSSVSPVKGLYLYGGVGTGKTML 149
>At3g25510.1 68416.m03172 disease resistance protein (TIR-NBS-LRR
class), putative domain signature TIR-NBS-LRR exists,
suggestive of a disease resistance protein.
Length = 1981
Score = 31.1 bits (67), Expect = 0.73
Identities = 13/43 (30%), Positives = 23/43 (53%)
Frame = +2
Query: 98 MTHKEKFVNLGIHPPKGVLLYGPPGTGKTLLARACAAQTKSTF 226
M + + L + + + ++GPPG GKT +AR +Q +F
Sbjct: 209 MENMRALLRLDLDDVRMIGIWGPPGIGKTTIARFLLSQVSKSF 251
>At5g58120.1 68418.m07272 disease resistance protein (TIR-NBS-LRR
class), putative domain signature TIR-NBS-LRR exists,
suggestive of a disease resistance protein.
Length = 1046
Score = 30.3 bits (65), Expect = 1.3
Identities = 12/24 (50%), Positives = 17/24 (70%)
Frame = +2
Query: 155 LYGPPGTGKTLLARACAAQTKSTF 226
+YGP G GKT +ARA ++ S+F
Sbjct: 215 IYGPAGIGKTTIARALHSRLSSSF 238
>At5g33393.1 68418.m03983 hypothetical protein
Length = 435
Score = 30.3 bits (65), Expect = 1.3
Identities = 16/64 (25%), Positives = 31/64 (48%)
Frame = -2
Query: 569 GSGFFIGMRKFDFSVQTSRSGRAGSKMSTLLVAAMTLMSAVELNPSSWFNNSNIVRCTSR 390
G + + +RK +FS T ++G+ + + A +L PS FNN ++V T++
Sbjct: 189 GCDYAVLIRKTEFSKATMMLTKSGAVQPKAFILPTPQVPASKLEPSLRFNNESLVVVTNQ 248
Query: 389 SPAF 378
+
Sbjct: 249 QMVY 252
>At4g15230.1 68417.m02333 ABC transporter family protein similar to
pleiotropic drug resistance like protein [Nicotiana
tabacum] GI:20522008, PDR5-like ABC transporter
[Spirodela polyrhiza] GI:1514643; contains Pfam profile
PF00005: ABC transporter
Length = 1326
Score = 30.3 bits (65), Expect = 1.3
Identities = 18/46 (39%), Positives = 25/46 (54%), Gaps = 1/46 (2%)
Frame = +2
Query: 131 IHPPKGVLLYGPPGTGKTLLARACAAQTKSTFLKLAGPQLVR-CSL 265
+ P + LL GPPG GKT L +A + + S +K+ G CSL
Sbjct: 164 VRPGRMTLLLGPPGCGKTTLLQALSGKF-SDSVKVGGEVCYNGCSL 208
>At3g29800.1 68416.m03792 AAA-type ATPase family contains Pfam
profile: ATPase family PF00004
Length = 440
Score = 30.3 bits (65), Expect = 1.3
Identities = 16/46 (34%), Positives = 27/46 (58%)
Frame = +2
Query: 68 QELIEAVVLPMTHKEKFVNLGIHPPKGVLLYGPPGTGKTLLARACA 205
+ LI+ + L ++ ++ + +G H + LL+G PG GKT L A A
Sbjct: 175 RRLIDDIDLFISKEDFYKRVGRHWMRYYLLHGLPGAGKTSLVAAIA 220
>At2g29940.1 68415.m03642 ABC transporter family protein similar to
ABC1 protein GI:14331118 from [Nicotiana
plumbaginifolia]
Length = 1426
Score = 30.3 bits (65), Expect = 1.3
Identities = 18/52 (34%), Positives = 27/52 (51%), Gaps = 3/52 (5%)
Frame = +2
Query: 86 VVLPMTHKE---KFVNLGIHPPKGVLLYGPPGTGKTLLARACAAQTKSTFLK 232
++ P HK K ++ I P + LL GPPG+GK+ L A A + + K
Sbjct: 165 IIKPRKHKLNILKDISGIIKPGRMTLLLGPPGSGKSTLLLALAGKLDKSLKK 216
>At2g25070.1 68415.m02999 protein phosphatase 2C, putative / PP2C,
putative
Length = 355
Score = 30.3 bits (65), Expect = 1.3
Identities = 12/27 (44%), Positives = 19/27 (70%)
Frame = +3
Query: 144 KEFFYMDLLVQGRHCWRELALLKQSLH 224
+ FF MD ++QG+ WRELA+L ++
Sbjct: 93 RAFFRMDDMMQGQRGWRELAVLGDKMN 119
>At4g15215.1 68417.m02332 ABC transporter family protein similar to
PDR5-like ABC transporter [Spirodela polyrhiza]
GI:1514643; contains Pfam profile PF00005: ABC
transporter
Length = 1390
Score = 29.9 bits (64), Expect = 1.7
Identities = 15/37 (40%), Positives = 22/37 (59%)
Frame = +2
Query: 131 IHPPKGVLLYGPPGTGKTLLARACAAQTKSTFLKLAG 241
+ P + LL GPPG GKT L +A + + S +K+ G
Sbjct: 161 VRPGRMTLLLGPPGCGKTTLLQALSGRL-SHSVKVGG 196
>At3g44630.3 68416.m04798 disease resistance protein RPP1-WsB-like
(TIR-NBS-LRR class), putative domain signature
TIR-NBS-LRR exists, suggestive of a disease resistance
protein., closest Col-0 homolog to RPP1-WsB
Length = 1240
Score = 29.9 bits (64), Expect = 1.7
Identities = 13/39 (33%), Positives = 21/39 (53%)
Frame = +2
Query: 110 EKFVNLGIHPPKGVLLYGPPGTGKTLLARACAAQTKSTF 226
E+ + L + + + ++GPPG GKT +AR Q F
Sbjct: 279 EQLLRLDLDEVRIIGIWGPPGIGKTTIARFLLNQVSDRF 317
>At3g44630.2 68416.m04800 disease resistance protein RPP1-WsB-like
(TIR-NBS-LRR class), putative domain signature
TIR-NBS-LRR exists, suggestive of a disease resistance
protein., closest Col-0 homolog to RPP1-WsB
Length = 1214
Score = 29.9 bits (64), Expect = 1.7
Identities = 13/39 (33%), Positives = 21/39 (53%)
Frame = +2
Query: 110 EKFVNLGIHPPKGVLLYGPPGTGKTLLARACAAQTKSTF 226
E+ + L + + + ++GPPG GKT +AR Q F
Sbjct: 279 EQLLRLDLDEVRIIGIWGPPGIGKTTIARFLLNQVSDRF 317
>At3g44630.1 68416.m04799 disease resistance protein RPP1-WsB-like
(TIR-NBS-LRR class), putative domain signature
TIR-NBS-LRR exists, suggestive of a disease resistance
protein., closest Col-0 homolog to RPP1-WsB
Length = 1214
Score = 29.9 bits (64), Expect = 1.7
Identities = 13/39 (33%), Positives = 21/39 (53%)
Frame = +2
Query: 110 EKFVNLGIHPPKGVLLYGPPGTGKTLLARACAAQTKSTF 226
E+ + L + + + ++GPPG GKT +AR Q F
Sbjct: 279 EQLLRLDLDEVRIIGIWGPPGIGKTTIARFLLNQVSDRF 317
>At3g44480.1 68416.m04781 disease resistance protein (TIR-NBS-LRR
class), putative domain signature TIR-NBS-LRR exists,
suggestive of a disease resistance protein.
Length = 1194
Score = 29.9 bits (64), Expect = 1.7
Identities = 13/39 (33%), Positives = 21/39 (53%)
Frame = +2
Query: 110 EKFVNLGIHPPKGVLLYGPPGTGKTLLARACAAQTKSTF 226
E+ + L + + + ++GPPG GKT +AR Q F
Sbjct: 283 EQLLRLDLDEVRMIGIWGPPGIGKTTIARFLFNQVSDRF 321
>At3g16340.1 68416.m02066 ABC transporter family protein similar to
PDR5-like ABC transporter GI:1514643 from [Spirodela
polyrhiza]; contains Pfam profile: PF00005 ABC
transporter
Length = 1416
Score = 29.9 bits (64), Expect = 1.7
Identities = 16/37 (43%), Positives = 21/37 (56%)
Frame = +2
Query: 131 IHPPKGVLLYGPPGTGKTLLARACAAQTKSTFLKLAG 241
I P + LL GPP +GKT L A A + + LK+ G
Sbjct: 170 IKPSRMTLLLGPPSSGKTTLLLALAGKLDQS-LKVTG 205
>At2g37280.1 68415.m04573 ABC transporter family protein similar to
PDR5-like ABC transporter GI:1514643 from [Spirodela
polyrhiza]
Length = 1413
Score = 29.9 bits (64), Expect = 1.7
Identities = 16/37 (43%), Positives = 21/37 (56%)
Frame = +2
Query: 131 IHPPKGVLLYGPPGTGKTLLARACAAQTKSTFLKLAG 241
I P + LL GPPG GKT L +A + ++ LK G
Sbjct: 162 ISPGRLTLLLGPPGCGKTTLLKALSGNLENN-LKCYG 197
>At1g77470.1 68414.m09021 replication factor C 36 kDA, putative
similar to SWISS-PROT:P40937 activator 1 36 kDa subunit
(Replication factor C 36 kDa subunit, A1 36 kDa subunit,
RF-C 36 kDa subunit, RFC36) [Homo sapiens]
Length = 369
Score = 29.9 bits (64), Expect = 1.7
Identities = 13/19 (68%), Positives = 14/19 (73%)
Frame = +2
Query: 149 VLLYGPPGTGKTLLARACA 205
+LLYGPPGTGKT A A
Sbjct: 75 LLLYGPPGTGKTSTILAVA 93
>At1g63870.1 68414.m07233 disease resistance protein (TIR-NBS-LRR
class), putative domain signature TIR-NBS-LRR exists,
suggestive of a disease resistance protein.
Length = 1031
Score = 29.9 bits (64), Expect = 1.7
Identities = 15/43 (34%), Positives = 23/43 (53%)
Frame = +2
Query: 98 MTHKEKFVNLGIHPPKGVLLYGPPGTGKTLLARACAAQTKSTF 226
+T E ++L K V + GP G GKT +ARA ++ + F
Sbjct: 197 LTEMESLLDLDYDGVKMVGISGPAGIGKTTIARALQSRLSNKF 239
>At1g33360.1 68414.m04129 ATP-dependent Clp protease ATP-binding
subunit ClpX, putative similar to CLP protease
regulatory subunit CLPX GI:2674203 from [Arabidopsis
thaliana]
Length = 656
Score = 29.9 bits (64), Expect = 1.7
Identities = 14/27 (51%), Positives = 17/27 (62%)
Frame = +2
Query: 149 VLLYGPPGTGKTLLARACAAQTKSTFL 229
VLL GP G+GKTLLA+ A F+
Sbjct: 311 VLLMGPTGSGKTLLAKTLARLVNVPFV 337
>At5g49840.1 68418.m06172 ATP-dependent Clp protease ATP-binding
subunit ClpX, putative similar to CLP protease
regulatory subunit CLPX GI:2674203 from [Arabidopsis
thaliana]; non-consensus splice donor GC at exon 4;
non-consensus splice donor AA at exon 7
Length = 606
Score = 29.5 bits (63), Expect = 2.2
Identities = 13/19 (68%), Positives = 15/19 (78%)
Frame = +2
Query: 149 VLLYGPPGTGKTLLARACA 205
VLL GP G+GKTLLA+ A
Sbjct: 265 VLLLGPTGSGKTLLAKTLA 283
>At5g47040.1 68418.m05797 Lon protease homolog 1, mitochondrial
(LON) identical to Lon protease homolog 1 mitochondrial
precursor SP:O64948 from [Arabidopsis thaliana]
Length = 888
Score = 29.5 bits (63), Expect = 2.2
Identities = 13/26 (50%), Positives = 17/26 (65%)
Frame = +2
Query: 161 GPPGTGKTLLARACAAQTKSTFLKLA 238
GPPG GKT LA + AA F++L+
Sbjct: 408 GPPGVGKTSLASSIAAALGRKFVRLS 433
>At4g30490.1 68417.m04329 AFG1-like ATPase family protein contains
Pfam profile: PF03969 AFG1-like ATPase
Length = 497
Score = 29.5 bits (63), Expect = 2.2
Identities = 15/32 (46%), Positives = 18/32 (56%)
Frame = +2
Query: 137 PPKGVLLYGPPGTGKTLLARACAAQTKSTFLK 232
P KG+ LYG GTGKT+L Q T+ K
Sbjct: 160 PVKGLYLYGGVGTGKTMLMDLFFDQLPCTWKK 191
>At4g15570.1 68417.m02379 tRNA-splicing endonuclease positive
effector-related contains similarity to SEN1, a positive
effector of tRNA-splicing endonuclease [Saccharomyces
cerevisiae] gi|172574|gb|AAB63976
Length = 818
Score = 29.5 bits (63), Expect = 2.2
Identities = 11/26 (42%), Positives = 19/26 (73%)
Frame = +2
Query: 107 KEKFVNLGIHPPKGVLLYGPPGTGKT 184
+++ +++G+ VL+ GPPGTGKT
Sbjct: 262 QKEAIDVGLSRKSFVLIQGPPGTGKT 287
>At3g53480.1 68416.m05904 ABC transporter family protein PDR5-like
ABC transporter, Spirodela polyrrhiza, EMBL:Z70524
Length = 1450
Score = 29.5 bits (63), Expect = 2.2
Identities = 17/41 (41%), Positives = 23/41 (56%)
Frame = +2
Query: 119 VNLGIHPPKGVLLYGPPGTGKTLLARACAAQTKSTFLKLAG 241
VN I P + LL GPP GKT L +A + ++ LK +G
Sbjct: 193 VNGIIKPGRLTLLLGPPSCGKTTLLKALSGNLENN-LKCSG 232
>At1g24290.1 68414.m03065 AAA-type ATPase family protein similar to
Werner helicase interacting protein [Homo sapiens]
GI:14349166; contains Pfam profiles PF00004: ATPase
family associated with various cellular activities
(AAA), PF00627: UBA/TS-N domain; contains
ATP/GTP-binding site motif A (P-loop)
Length = 525
Score = 29.5 bits (63), Expect = 2.2
Identities = 11/27 (40%), Positives = 18/27 (66%)
Frame = +2
Query: 149 VLLYGPPGTGKTLLARACAAQTKSTFL 229
++ +GPPGTGKT +A++ +K L
Sbjct: 140 IVFWGPPGTGKTSIAKSLINSSKDPSL 166
>At5g53350.1 68418.m06630 ATP-dependent Clp protease ATP-binding
subunit ClpX1 (CLPX) identical to CLP protease
regulatory subunit CLPX GI:2674203 from [Arabidopsis
thaliana]
Length = 579
Score = 29.1 bits (62), Expect = 2.9
Identities = 12/19 (63%), Positives = 15/19 (78%)
Frame = +2
Query: 149 VLLYGPPGTGKTLLARACA 205
+LL GP G+GKTLLA+ A
Sbjct: 226 ILLMGPTGSGKTLLAKTLA 244
>At5g40910.1 68418.m04967 disease resistance protein (TIR-NBS-LRR
class), putative domain signature TIR-NBS-LRR exists,
suggestive of a disease resistance protein.
Non-consensus TT donor splice site at exon 1
Length = 1104
Score = 29.1 bits (62), Expect = 2.9
Identities = 15/43 (34%), Positives = 23/43 (53%)
Frame = +2
Query: 98 MTHKEKFVNLGIHPPKGVLLYGPPGTGKTLLARACAAQTKSTF 226
+T + F+ L K + ++GP G GKT +ARA Q + F
Sbjct: 192 LTKLDSFLCLESDDVKMIGIWGPAGIGKTTIARALFNQLSTGF 234
>At5g18350.1 68418.m02159 disease resistance protein (TIR-NBS-LRR
class), putative domain signature TIR-NBS-LRR exists,
suggestive of a disease resistance protein.
Length = 1193
Score = 29.1 bits (62), Expect = 2.9
Identities = 12/24 (50%), Positives = 14/24 (58%)
Frame = +2
Query: 155 LYGPPGTGKTLLARACAAQTKSTF 226
+ GPPG GKT +ARA Q F
Sbjct: 219 IVGPPGIGKTTIARALRDQISENF 242
>At4g15236.1 68417.m02335 ABC transporter family protein similar to
pleiotropic drug resistance like protein [Nicotiana
tabacum] GI:20522008, ABC1 protein [Nicotiana
plumbaginifolia] GI:14331118; contains Pfam profile
PF00005: ABC transporter
Length = 1388
Score = 29.1 bits (62), Expect = 2.9
Identities = 13/27 (48%), Positives = 16/27 (59%)
Frame = +2
Query: 131 IHPPKGVLLYGPPGTGKTLLARACAAQ 211
I P + LL GPPG GKT L A + +
Sbjct: 159 IRPKRMTLLLGPPGCGKTTLLLALSGR 185
>At3g04220.1 68416.m00446 disease resistance protein (TIR-NBS-LRR
class), putative domain signature TIR-NBS-LRR exists,
suggestive of a disease resistance protein.
Length = 896
Score = 29.1 bits (62), Expect = 2.9
Identities = 12/28 (42%), Positives = 17/28 (60%)
Frame = +2
Query: 143 KGVLLYGPPGTGKTLLARACAAQTKSTF 226
K + ++GPPG GKT +AR+ Q F
Sbjct: 259 KTIGIWGPPGVGKTTIARSLYNQHSDKF 286
>At1g63750.1 68414.m07214 disease resistance protein (TIR-NBS-LRR
class), putative domain signature TIR-NBS-LRR exists,
suggestive of a disease resistance protein.
Length = 1131
Score = 29.1 bits (62), Expect = 2.9
Identities = 17/73 (23%), Positives = 40/73 (54%)
Frame = +2
Query: 8 RVDERPTEQYSDIGGLDKQIQELIEAVVLPMTHKEKFVNLGIHPPKGVLLYGPPGTGKTL 187
+++ P++ + D+ GL+ ++++ +L + +K++ + +GI GP G GK+
Sbjct: 179 KLNATPSKDFEDMMGLEAHLKKIQS--LLRLDYKDEALIIGIS--------GPAGIGKST 228
Query: 188 LARACAAQTKSTF 226
+ARA ++ F
Sbjct: 229 IARALESRLSDRF 241
>At5g67630.1 68418.m08527 DNA helicase, putative similar to
RuvB-like DNA helicase reptin [Danio rerio] GI:27733814,
reptin [Drosophila melanogaster] GI:7243682
Length = 469
Score = 28.7 bits (61), Expect = 3.9
Identities = 14/50 (28%), Positives = 26/50 (52%), Gaps = 2/50 (4%)
Frame = +2
Query: 143 KGVLLYGPPGTGKTLLARACAAQ--TKSTFLKLAGPQLVRCSLVMVPSLS 286
+ +L+ G PGTGKT +A A ++ F +AG ++ + +L+
Sbjct: 67 RAILIAGQPGTGKTAIAMGMAKSLGLETPFAMIAGSEIFSLEMSKTEALT 116
>At5g26860.1 68418.m03204 Lon protease homolog 2, mitochondrial
almost identical to Lon protease homolog 2
mitochondrial precursor SP:P93655, GI:1848290 from
[Arabidopsis thaliana]
Length = 940
Score = 28.7 bits (61), Expect = 3.9
Identities = 13/37 (35%), Positives = 18/37 (48%)
Frame = +2
Query: 128 GIHPPKGVLLYGPPGTGKTLLARACAAQTKSTFLKLA 238
G K + L GPPG GKT + R+ A F + +
Sbjct: 453 GTSQGKIICLSGPPGVGKTSIGRSIARALNRKFFRFS 489
>At4g25750.1 68417.m03707 ABC transporter family protein Bactrocera
tryoni membrane transporter (white) gene, PID:g3676298
Length = 577
Score = 28.7 bits (61), Expect = 3.9
Identities = 13/35 (37%), Positives = 19/35 (54%)
Frame = +2
Query: 119 VNLGIHPPKGVLLYGPPGTGKTLLARACAAQTKST 223
+ L HP + + + GP G GK+ L AA+T T
Sbjct: 34 ITLTSHPSQILAIIGPSGAGKSTLLDILAARTSPT 68
>At4g14670.1 68417.m02255 heat shock protein 101, putative / HSP101,
putative similar to heat shock protein 101 GI:6715468
GB:AAF26423 from [Arabidopsis thaliana]
Length = 623
Score = 28.7 bits (61), Expect = 3.9
Identities = 16/47 (34%), Positives = 21/47 (44%)
Frame = +2
Query: 71 ELIEAVVLPMTHKEKFVNLGIHPPKGVLLYGPPGTGKTLLARACAAQ 211
E ++AV + + P L GP G GKT LA+A A Q
Sbjct: 541 EAVKAVAAAILRSRVGLGRPQQPSGSFLFLGPTGVGKTELAKALAEQ 587
>At2g26910.1 68415.m03228 ABC transporter family protein similar to
PDR5-like ABC transporter GI:1514643 from [Spirodela
polyrhiza]
Length = 1420
Score = 28.7 bits (61), Expect = 3.9
Identities = 16/37 (43%), Positives = 21/37 (56%)
Frame = +2
Query: 131 IHPPKGVLLYGPPGTGKTLLARACAAQTKSTFLKLAG 241
I P + LL GPP +GKT L A A + T L+ +G
Sbjct: 158 IRPSRLTLLLGPPSSGKTTLLLALAGRL-GTNLQTSG 193
>At1g08270.1 68414.m00913 expressed protein low similarity to
SP|P46467 SKD1 protein (Vacuolar sorting protein 4b)
{Mus musculus}
Length = 126
Score = 28.7 bits (61), Expect = 3.9
Identities = 12/36 (33%), Positives = 22/36 (61%)
Frame = +2
Query: 11 VDERPTEQYSDIGGLDKQIQELIEAVVLPMTHKEKF 118
+ E+P +++ + GL+ Q L EAV+LP+ + F
Sbjct: 84 IREKPNVKWTVVAGLESAKQALKEAVILPVNFPQFF 119
>At5g41540.1 68418.m05048 disease resistance protein (TIR-NBS-LRR
class), putative domain signature TIR-NBS-LRR exists,
suggestive of a disease resistance protein.
Length = 1038
Score = 28.3 bits (60), Expect = 5.1
Identities = 19/68 (27%), Positives = 34/68 (50%)
Frame = +2
Query: 23 PTEQYSDIGGLDKQIQELIEAVVLPMTHKEKFVNLGIHPPKGVLLYGPPGTGKTLLARAC 202
P+ + ++ GLD +++L + L + ++ +GI +GP G GKT +ARA
Sbjct: 177 PSRDFEEMVGLDAHLRKLDSLLCL---NSDEVKMIGI--------WGPAGIGKTTIARAL 225
Query: 203 AAQTKSTF 226
Q + F
Sbjct: 226 YNQLSTNF 233
>At5g11250.1 68418.m01314 disease resistance protein (TIR-NBS-LRR
class), putative domain signature TIR-NBS-LRR exists,
suggestive of a disease resistance protein.
Length = 1189
Score = 28.3 bits (60), Expect = 5.1
Identities = 11/24 (45%), Positives = 15/24 (62%)
Frame = +2
Query: 155 LYGPPGTGKTLLARACAAQTKSTF 226
++GPPG GKT +AR Q +F
Sbjct: 262 IWGPPGIGKTTIARVVYNQLSHSF 285
>At3g16560.1 68416.m02116 protein phosphatase 2C-related /
PP2C-related contains protein phosphatase 2C domain
Length = 493
Score = 28.3 bits (60), Expect = 5.1
Identities = 19/55 (34%), Positives = 26/55 (47%)
Frame = +1
Query: 415 ELLNQLDGFSSTADIKVIAATNRVDILDPALPDLDVWTEKSNFLIPMKKPEPELC 579
E+L LD S + A +++DIL P+L V S+ P PEPE C
Sbjct: 76 EILPSLDSPKSFRKVPSSPALSKLDILSPSLHGSMVSLSCSSSTSP-SPPEPESC 129
>At3g05780.1 68416.m00649 Lon protease, putative similar to Lon
protease homolog 2 SP:P93655
Length = 924
Score = 28.3 bits (60), Expect = 5.1
Identities = 13/37 (35%), Positives = 18/37 (48%)
Frame = +2
Query: 128 GIHPPKGVLLYGPPGTGKTLLARACAAQTKSTFLKLA 238
G K + L GPPG GKT + R+ A F + +
Sbjct: 436 GTSQGKIICLSGPPGVGKTSIGRSIARALDRKFFRFS 472
>At1g59870.1 68414.m06745 ABC transporter family protein similar to
PDR5-like ABC transporter GI:1514643 from [Spirodela
polyrhiza]
Length = 1469
Score = 28.3 bits (60), Expect = 5.1
Identities = 15/37 (40%), Positives = 22/37 (59%)
Frame = +2
Query: 131 IHPPKGVLLYGPPGTGKTLLARACAAQTKSTFLKLAG 241
I P + LL GPP +GKT L A A + + L+++G
Sbjct: 194 IKPGRMTLLLGPPSSGKTTLLLALAGKLDKS-LQVSG 229
>At5g38850.1 68418.m04699 disease resistance protein (TIR-NBS-LRR
class), putative domain signature TIR-NBS-LRR exists,
suggestive of a disease resistance protein.
Length = 986
Score = 27.9 bits (59), Expect = 6.8
Identities = 15/35 (42%), Positives = 19/35 (54%)
Frame = +2
Query: 161 GPPGTGKTLLARACAAQTKSTFLKLAGPQLVRCSL 265
GP G GKT +ARA + S F + + VR SL
Sbjct: 206 GPAGIGKTTIARALQSLLSSNFQRSCFMENVRGSL 240
>At3g60880.2 68416.m06811 dihydrodipicolinate synthase 1 (DHDPS1)
(DHDPS) (DHPS1) identical to SP|Q9LZX6
Dihydrodipicolinate synthase 1, chloroplast precursor
(EC 4.2.1.52) (DHDPS 1) {Arabidopsis thaliana}
Length = 365
Score = 27.9 bits (59), Expect = 6.8
Identities = 11/30 (36%), Positives = 17/30 (56%)
Frame = -1
Query: 561 LLHWDEEIRFFGPNVQIWQGRVQNVHSIGS 472
L+ WDE I G V + GR++ + + GS
Sbjct: 113 LMSWDEHIMLIGHTVNCFGGRIKVIGNTGS 142
>At3g60880.1 68416.m06810 dihydrodipicolinate synthase 1 (DHDPS1)
(DHDPS) (DHPS1) identical to SP|Q9LZX6
Dihydrodipicolinate synthase 1, chloroplast precursor
(EC 4.2.1.52) (DHDPS 1) {Arabidopsis thaliana}
Length = 364
Score = 27.9 bits (59), Expect = 6.8
Identities = 11/30 (36%), Positives = 17/30 (56%)
Frame = -1
Query: 561 LLHWDEEIRFFGPNVQIWQGRVQNVHSIGS 472
L+ WDE I G V + GR++ + + GS
Sbjct: 112 LMSWDEHIMLIGHTVNCFGGRIKVIGNTGS 141
>At3g58120.1 68416.m06481 bZIP transcription factor family protein
contains Pfam profile: PF00170 bZIP transcription factor
;supported by cDNA gi|15100054|gb|AF401300.1|AF401300
Length = 329
Score = 27.9 bits (59), Expect = 6.8
Identities = 15/42 (35%), Positives = 19/42 (45%)
Frame = -1
Query: 165 GPYKRTPLGGWMPRFTNFSLCVIGNTTASINSCICLSRPPIS 40
GP ++ P WM F +FS G SI+ I PP S
Sbjct: 38 GPQQQNP--SWMDEFLDFSATRRGTHRRSISDSIAFLEPPSS 77
>At2g46620.1 68415.m05815 AAA-type ATPase family protein contains
Pfam profile: ATPase family PF00004
Length = 491
Score = 27.9 bits (59), Expect = 6.8
Identities = 14/33 (42%), Positives = 18/33 (54%)
Frame = +2
Query: 107 KEKFVNLGIHPPKGVLLYGPPGTGKTLLARACA 205
K+ + LG + LLYGP GTGK+ A A
Sbjct: 220 KQYYNRLGRVWKRSYLLYGPSGTGKSSFVAAMA 252
>At2g14080.1 68415.m01566 disease resistance protein (TIR-NBS-LRR
class), putative domain signature TIR-NBS-LRR exists,
suggestive of a disease resistance protein.
Length = 1215
Score = 27.9 bits (59), Expect = 6.8
Identities = 11/24 (45%), Positives = 15/24 (62%)
Frame = +2
Query: 155 LYGPPGTGKTLLARACAAQTKSTF 226
++GPPG GKT + R Q S+F
Sbjct: 256 IWGPPGIGKTTIVRFLYNQLSSSF 279
>At1g33290.2 68414.m04118 sporulation protein-related isoform
contains non-consensus AT-donor acceptor site at intron
6; similar to Stage III sporulation protein AA.
(Swiss-Prot:Q01367) [Bacillus subtilis]; similar to
SpoIIIAA (GI:1303904) [Bacillus subtilis]; similar to
stage III sporulation protein AA (GI:18145497)
[Clostridium perfringens str. 13]
Length = 303
Score = 27.9 bits (59), Expect = 6.8
Identities = 13/34 (38%), Positives = 16/34 (47%)
Frame = +2
Query: 131 IHPPKGVLLYGPPGTGKTLLARACAAQTKSTFLK 232
+H K +L G PG GKT + R A F K
Sbjct: 161 LHYGKSILFVGRPGVGKTTVLREIARVLSDEFQK 194
>At1g33290.1 68414.m04117 sporulation protein-related isoform
contains non-consensus AT-donor acceptor site at intron
6; similar to Stage III sporulation protein AA.
(Swiss-Prot:Q01367) [Bacillus subtilis]; similar to
SpoIIIAA (GI:1303904) [Bacillus subtilis]; similar to
stage III sporulation protein AA (GI:18145497)
[Clostridium perfringens str. 13]
Length = 379
Score = 27.9 bits (59), Expect = 6.8
Identities = 13/34 (38%), Positives = 16/34 (47%)
Frame = +2
Query: 131 IHPPKGVLLYGPPGTGKTLLARACAAQTKSTFLK 232
+H K +L G PG GKT + R A F K
Sbjct: 161 LHYGKSILFVGRPGVGKTTVLREIARVLSDEFQK 194
>At1g15210.1 68414.m01818 ABC transporter family protein Similar to
gb|Z70524 GI:1514643 PDR5-like ABC transporter from
Spirodela polyrrhiza and is a member of the PF|00005 ABC
transporter family. ESTs gb|N97039 and gb|T43169 come
from this gene
Length = 1442
Score = 27.9 bits (59), Expect = 6.8
Identities = 12/27 (44%), Positives = 16/27 (59%)
Frame = +2
Query: 131 IHPPKGVLLYGPPGTGKTLLARACAAQ 211
+ P + LL GPP +GKT L A A +
Sbjct: 192 VKPSRMTLLLGPPSSGKTTLLLALAGK 218
>At5g52860.1 68418.m06561 ABC transporter family protein
Length = 589
Score = 27.5 bits (58), Expect = 8.9
Identities = 12/35 (34%), Positives = 19/35 (54%)
Frame = +2
Query: 119 VNLGIHPPKGVLLYGPPGTGKTLLARACAAQTKST 223
+ L HP + + + GP G GK+ L A++T T
Sbjct: 48 ITLTAHPTEILAVVGPSGAGKSTLLDILASKTSPT 82
>At5g45260.1 68418.m05555 disease resistance protein (TIR-NBS-LRR
class), putative domain signature TIR-NBS-LRR exists,
suggestive of a disease resistance protein.
Length = 1187
Score = 27.5 bits (58), Expect = 8.9
Identities = 12/24 (50%), Positives = 15/24 (62%)
Frame = +2
Query: 155 LYGPPGTGKTLLARACAAQTKSTF 226
++G PG GKT LA+A Q S F
Sbjct: 177 IWGMPGIGKTTLAKAVFDQMSSAF 200
>At5g41550.1 68418.m05049 disease resistance protein (TIR-NBS-LRR
class), putative domain signature TIR-NBS-LRR exists,
suggestive of a disease resistance protein.
Length = 1085
Score = 27.5 bits (58), Expect = 8.9
Identities = 12/28 (42%), Positives = 18/28 (64%)
Frame = +2
Query: 143 KGVLLYGPPGTGKTLLARACAAQTKSTF 226
K + ++GP G GK+ +ARA Q S+F
Sbjct: 208 KMIGIWGPAGIGKSTIARALYNQLSSSF 235
>At4g16990.3 68417.m02563 disease resistance protein (TIR-NBS
class), putative domain signature TIR-NBS exists,
suggestive of a disease resistance protein.
Length = 801
Score = 27.5 bits (58), Expect = 8.9
Identities = 21/68 (30%), Positives = 32/68 (47%)
Frame = +2
Query: 23 PTEQYSDIGGLDKQIQELIEAVVLPMTHKEKFVNLGIHPPKGVLLYGPPGTGKTLLARAC 202
P+ +SD G++ I+ LI + +K +GI GP TGKT + RA
Sbjct: 174 PSNNFSDFVGIEAHIEALISMLRFD---SKKARMIGI--------CGPSETGKTTIGRAL 222
Query: 203 AAQTKSTF 226
++ KS F
Sbjct: 223 YSRLKSDF 230
>At4g16990.2 68417.m02562 disease resistance protein (TIR-NBS
class), putative domain signature TIR-NBS exists,
suggestive of a disease resistance protein.
Length = 796
Score = 27.5 bits (58), Expect = 8.9
Identities = 21/68 (30%), Positives = 32/68 (47%)
Frame = +2
Query: 23 PTEQYSDIGGLDKQIQELIEAVVLPMTHKEKFVNLGIHPPKGVLLYGPPGTGKTLLARAC 202
P+ +SD G++ I+ LI + +K +GI GP TGKT + RA
Sbjct: 174 PSNNFSDFVGIEAHIEALISMLRFD---SKKARMIGI--------CGPSETGKTTIGRAL 222
Query: 203 AAQTKSTF 226
++ KS F
Sbjct: 223 YSRLKSDF 230
>At4g16990.1 68417.m02561 disease resistance protein (TIR-NBS
class), putative domain signature TIR-NBS exists,
suggestive of a disease resistance protein.
Length = 520
Score = 27.5 bits (58), Expect = 8.9
Identities = 21/68 (30%), Positives = 32/68 (47%)
Frame = +2
Query: 23 PTEQYSDIGGLDKQIQELIEAVVLPMTHKEKFVNLGIHPPKGVLLYGPPGTGKTLLARAC 202
P+ +SD G++ I+ LI + +K +GI GP TGKT + RA
Sbjct: 174 PSNNFSDFVGIEAHIEALISMLRFD---SKKARMIGI--------CGPSETGKTTIGRAL 222
Query: 203 AAQTKSTF 226
++ KS F
Sbjct: 223 YSRLKSDF 230
>At4g14370.1 68417.m02214 disease resistance protein (TIR-NBS-LRR
class), putative similar to zinc finger protein
(GI:15811367) [Arabidopsis thaliana]; similar to
TIR-NBS-LRR (GI:27466164) [Arabidopsis thaliana];
similar to disease resistance protein RPP1-WsB
(GI:3860165) [Arabidopsis thaliana]
Length = 1996
Score = 27.5 bits (58), Expect = 8.9
Identities = 19/67 (28%), Positives = 35/67 (52%)
Frame = +2
Query: 26 TEQYSDIGGLDKQIQELIEAVVLPMTHKEKFVNLGIHPPKGVLLYGPPGTGKTLLARACA 205
+ + D+ GL+ ++E+ +L + +K+ + +GI GP G GKT +ARA
Sbjct: 138 SRDFDDMVGLEAHLEEM--KYLLDLDYKDGAMIVGI--------CGPAGIGKTTIARALY 187
Query: 206 AQTKSTF 226
+ S+F
Sbjct: 188 SLLLSSF 194
>At2g34680.1 68415.m04260 leucine-rich repeat family protein
contains leucine rich repeat (LRR) domains,
Pfam:PF00560; identical to cDNA hypothetical protein
(AIR9) mRNA, partial cds GI:3695020
Length = 1661
Score = 27.5 bits (58), Expect = 8.9
Identities = 14/43 (32%), Positives = 24/43 (55%)
Frame = -2
Query: 416 SNIVRCTSRSPAFSESKRFVPIASSSSMKMIAGAFSLANAKAS 288
S++ T P+ SESK+ VP++ S + FSL+ ++S
Sbjct: 125 SSLSAKTVSKPSLSESKKSVPVSPGSRSLTKSTGFSLSKPESS 167
>At2g30940.2 68415.m03773 protein kinase family protein contains
protein kinase domain, Pfam:PF00069
Length = 447
Score = 27.5 bits (58), Expect = 8.9
Identities = 17/42 (40%), Positives = 25/42 (59%), Gaps = 2/42 (4%)
Frame = +1
Query: 457 IKVIAATNR-VDILDPALPDLDVWTE-KSNFLIPMKKPEPEL 576
IK + A + VD+LDP+LP+ E K LI ++ +PEL
Sbjct: 368 IKEMVANHMIVDVLDPSLPEFPTIKELKRIVLISLRCVDPEL 409
>At2g30940.1 68415.m03772 protein kinase family protein contains
protein kinase domain, Pfam:PF00069
Length = 445
Score = 27.5 bits (58), Expect = 8.9
Identities = 17/42 (40%), Positives = 25/42 (59%), Gaps = 2/42 (4%)
Frame = +1
Query: 457 IKVIAATNR-VDILDPALPDLDVWTE-KSNFLIPMKKPEPEL 576
IK + A + VD+LDP+LP+ E K LI ++ +PEL
Sbjct: 366 IKEMVANHMIVDVLDPSLPEFPTIKELKRIVLISLRCVDPEL 407
>At1g74310.1 68414.m08605 heat shock protein 101 (HSP101) identical
to heat shock protein 101 GI:6715468 GB:AAF26423 from
[Arabidopsis thaliana]
Length = 911
Score = 27.5 bits (58), Expect = 8.9
Identities = 14/25 (56%), Positives = 16/25 (64%), Gaps = 1/25 (4%)
Frame = +2
Query: 140 PKGVLLY-GPPGTGKTLLARACAAQ 211
P G L+ GP G GKT LA+A A Q
Sbjct: 598 PTGSFLFLGPTGVGKTELAKALAEQ 622
>At1g73170.1 68414.m08466 expressed protein
Length = 666
Score = 27.5 bits (58), Expect = 8.9
Identities = 12/28 (42%), Positives = 16/28 (57%)
Frame = +2
Query: 149 VLLYGPPGTGKTLLARACAAQTKSTFLK 232
+LL GPPG GKT + R A + + K
Sbjct: 200 LLLIGPPGVGKTTMIREVARMLGNDYEK 227
>At1g15520.1 68414.m01867 ABC transporter family protein similar to
ABC1 protein GI:14331118 from [Nicotiana
plumbaginifolia]
Length = 1423
Score = 27.5 bits (58), Expect = 8.9
Identities = 12/27 (44%), Positives = 16/27 (59%)
Frame = +2
Query: 131 IHPPKGVLLYGPPGTGKTLLARACAAQ 211
+ P + LL GPP +GKT L A A +
Sbjct: 177 VKPGRMALLLGPPSSGKTTLLLALAGK 203
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,107,881
Number of Sequences: 28952
Number of extensions: 393047
Number of successful extensions: 1648
Number of sequences better than 10.0: 163
Number of HSP's better than 10.0 without gapping: 1399
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1604
length of database: 12,070,560
effective HSP length: 79
effective length of database: 9,783,352
effective search space used: 1477286152
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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