Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= prgv0288
         (694 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292370-1|CAL23182.1|  418|Tribolium castaneum gustatory recept...    26   0.34 
U04271-2|AAA03709.1|  490|Tribolium castaneum alpha-amylase II p...    24   1.0  
X06905-1|CAA30009.1|  489|Tribolium castaneum protein ( Triboliu...    24   1.4  
U09586-2|AAC47271.1|  712|Tribolium castaneum protease, reverse ...    23   3.1  
DQ855493-1|ABH88180.1|  127|Tribolium castaneum chemosensory pro...    23   3.1  
AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.    22   5.5  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    21   9.6  

>AM292370-1|CAL23182.1|  418|Tribolium castaneum gustatory receptor
           candidate 49 protein.
          Length = 418

 Score = 25.8 bits (54), Expect = 0.34
 Identities = 9/29 (31%), Positives = 19/29 (65%)
 Frame = -2

Query: 531 QTEMRLITNSRSPNYVMSHKKN*SFFILN 445
           + ++ L+ +S  PNY++   KN ++ +LN
Sbjct: 5   KNKLLLLDSSTQPNYLILSNKNNTYLVLN 33


>U04271-2|AAA03709.1|  490|Tribolium castaneum alpha-amylase II
           protein.
          Length = 490

 Score = 24.2 bits (50), Expect = 1.0
 Identities = 10/25 (40%), Positives = 13/25 (52%)
 Frame = +2

Query: 80  GYHCQDRGNLAFFKGAFSNVLRGTG 154
           GY C+ R    F    F N ++GTG
Sbjct: 376 GYGCEHRWRQIFNMVGFRNAVQGTG 400


>X06905-1|CAA30009.1|  489|Tribolium castaneum protein ( Tribolium
           castaneum mRNAfor alhpa amylase 3'region. ).
          Length = 489

 Score = 23.8 bits (49), Expect = 1.4
 Identities = 10/25 (40%), Positives = 13/25 (52%)
 Frame = +2

Query: 80  GYHCQDRGNLAFFKGAFSNVLRGTG 154
           GY C+ R    F    F N ++GTG
Sbjct: 375 GYVCEHRWRQIFNMVGFRNAVQGTG 399


>U09586-2|AAC47271.1|  712|Tribolium castaneum protease, reverse
           transcriptase andRNase H protein.
          Length = 712

 Score = 22.6 bits (46), Expect = 3.1
 Identities = 10/32 (31%), Positives = 20/32 (62%), Gaps = 2/32 (6%)
 Frame = -1

Query: 691 IHYIIMSNSLPL--CKKKWKISIPTKLKFKID 602
           + +I +++S P+  C KK  +  P+ L+ K+D
Sbjct: 230 VGHIEVNHSAPITTCNKKQHLESPSALQAKVD 261


>DQ855493-1|ABH88180.1|  127|Tribolium castaneum chemosensory
           protein 7 protein.
          Length = 127

 Score = 22.6 bits (46), Expect = 3.1
 Identities = 10/27 (37%), Positives = 17/27 (62%)
 Frame = +3

Query: 312 LNKVLYNDSIIYCFIKCYIIACPN*SE 392
           ++K+L ND ++  +IKC +   P  SE
Sbjct: 32  VDKILNNDRVLTNYIKCLMDEGPCTSE 58


>AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.
          Length = 712

 Score = 21.8 bits (44), Expect = 5.5
 Identities = 10/25 (40%), Positives = 13/25 (52%)
 Frame = +2

Query: 113 FFKGAFSNVLRGTGGAFVLVLYDEI 187
           F    ++  L  TGG  V+ L DEI
Sbjct: 507 FRPNTYNRFLAATGGDHVISLIDEI 531


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 21.0 bits (42), Expect = 9.6
 Identities = 12/46 (26%), Positives = 15/46 (32%)
 Frame = -2

Query: 165  TKAPPVPLRTLEKAPLKKARFPRSWQW*PSSGWCSCTGYRSWHDQT 28
            T APP     ++            W   PS+ W S T    W   T
Sbjct: 1011 TPAPPQVTTGVDTGASSTEHMHPDWTTKPSTWWSSTTTSPWWTTTT 1056


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 150,893
Number of Sequences: 336
Number of extensions: 3011
Number of successful extensions: 11
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18218375
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)