Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= prgv0286
         (695 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

M93690-1|AAA29364.1|  613|Anopheles gambiae ORF1 protein.              27   0.43 
AJ439060-10|CAD27761.1| 1197|Anopheles gambiae putative FGF-sign...    27   0.43 
AF313909-1|AAL99382.1| 1024|Anopheles gambiae collagen IV alpha ...    25   2.3  
CR954256-4|CAJ14145.1| 1494|Anopheles gambiae tensin protein.          25   3.0  
AY578805-1|AAT07310.1|  753|Anopheles gambiae medea protein.           25   3.0  
X87411-1|CAA60858.1|  599|Anopheles gambiae maltase-like protein...    24   4.0  
CR954256-10|CAJ14151.1|  548|Anopheles gambiae putative alkaline...    24   4.0  
CR954257-2|CAJ14153.1| 1664|Anopheles gambiae Tubby protein.           23   7.0  
AY027891-1|AAK15783.1|  801|Anopheles gambiae collagen IV alpha ...    23   7.0  
AJ438610-4|CAD27476.1|  593|Anopheles gambiae putative transcrip...    23   7.0  
DQ370045-1|ABD18606.1|  285|Anopheles gambiae putative TIL domai...    23   9.2  
AY135184-1|AAN17505.1| 1009|Anopheles gambiae laccase 1 protein.       23   9.2  
AB090813-2|BAC57902.1| 1099|Anopheles gambiae reverse transcript...    23   9.2  

>M93690-1|AAA29364.1|  613|Anopheles gambiae ORF1 protein.
          Length = 613

 Score = 27.5 bits (58), Expect = 0.43
 Identities = 27/105 (25%), Positives = 43/105 (40%)
 Frame = +2

Query: 287 YPGTTSCRPEPPQAPLPANNRLQMGREYTSGPAAGHKSRRLVDRSPDGVNKAGCRIVDPI 466
           +P  +S R   P+A   + NR+   +   S P     +  +V  S D   +  C I+   
Sbjct: 27  HPQGSSGRVLRPRARSVSLNRVDALKVSDSTPVEPPPTAGIVYLSDDEEEELNCTILAGP 86

Query: 467 RGVGVLNHGKVD*SLLKSSQSTFGRRGEVATRVSPIPSVTRIGRC 601
            G+ V   GKV   +L    S   +R E+     P  S  + G+C
Sbjct: 87  SGLAVPPMGKVPLVVLDKLPSQSQQREEMTV---PATSTPKAGKC 128


>AJ439060-10|CAD27761.1| 1197|Anopheles gambiae putative FGF-signaling
            promoter protein.
          Length = 1197

 Score = 27.5 bits (58), Expect = 0.43
 Identities = 25/89 (28%), Positives = 38/89 (42%)
 Frame = -1

Query: 554  RPRPYDRRSTGSSLRATSRPSRDSGPQHP*WGRRCGNPPC*LHQGSDRPGDDSCAQRRAQ 375
            RP P++R     S  + ++PS  +G +     +R GN        SD PG D C + +  
Sbjct: 923  RPTPFERMR---SFFSRTKPS-PAGGKAAAAKQRAGNGSA--GGASDPPGADVCDEIKFS 976

Query: 374  RYTPGPSEGDYSPEEGLEEALGDNSLSQD 288
                G S G Y+       +L  NS+  D
Sbjct: 977  MAGGGGSNGGYAVVRPQSLSLSMNSMGSD 1005


>AF313909-1|AAL99382.1| 1024|Anopheles gambiae collagen IV alpha 1
           chain protein.
          Length = 1024

 Score = 25.0 bits (52), Expect = 2.3
 Identities = 12/28 (42%), Positives = 15/28 (53%), Gaps = 2/28 (7%)
 Frame = -1

Query: 413 RPGDDSCAQRRAQRYTPGP--SEGDYSP 336
           RPG+D     + QR  PGP   +GD  P
Sbjct: 607 RPGNDGLPGPQGQRGLPGPQGEKGDQGP 634


>CR954256-4|CAJ14145.1| 1494|Anopheles gambiae tensin protein.
          Length = 1494

 Score = 24.6 bits (51), Expect = 3.0
 Identities = 11/24 (45%), Positives = 15/24 (62%)
 Frame = -1

Query: 545 PYDRRSTGSSLRATSRPSRDSGPQ 474
           P +RR  GSS+  +S PS  + PQ
Sbjct: 585 PVNRRVQGSSVSPSSFPSPQASPQ 608


>AY578805-1|AAT07310.1|  753|Anopheles gambiae medea protein.
          Length = 753

 Score = 24.6 bits (51), Expect = 3.0
 Identities = 10/32 (31%), Positives = 19/32 (59%)
 Frame = -1

Query: 572 WGSPGLRPRPYDRRSTGSSLRATSRPSRDSGP 477
           +G+  + P+ +   +    L A++ PSR+SGP
Sbjct: 191 YGTMSMHPQTHHSWAACMELAASADPSRNSGP 222


>X87411-1|CAA60858.1|  599|Anopheles gambiae maltase-like protein
           Agm2 protein.
          Length = 599

 Score = 24.2 bits (50), Expect = 4.0
 Identities = 10/17 (58%), Positives = 13/17 (76%)
 Frame = -2

Query: 217 RRGSRRPARTPPQYPST 167
           + G+R PARTP Q+ ST
Sbjct: 416 QEGTRDPARTPFQWDST 432


>CR954256-10|CAJ14151.1|  548|Anopheles gambiae putative alkaline
           phosphatase protein.
          Length = 548

 Score = 24.2 bits (50), Expect = 4.0
 Identities = 13/39 (33%), Positives = 19/39 (48%), Gaps = 2/39 (5%)
 Frame = -2

Query: 466 DGVDDAATRLVDS--IRGAIDQATTLVPSGGPRGILPAH 356
           DG D A  + + S  I G + +   ++  GG R  LP H
Sbjct: 240 DGFDPAVCQDIASQLIHGEVGKHMQVIMGGGRREFLPTH 278


>CR954257-2|CAJ14153.1| 1664|Anopheles gambiae Tubby protein.
          Length = 1664

 Score = 23.4 bits (48), Expect = 7.0
 Identities = 8/14 (57%), Positives = 11/14 (78%)
 Frame = +1

Query: 163  SRWRDTEEGSSRAS 204
            SRWRD EEG  +++
Sbjct: 1437 SRWRDMEEGGRQST 1450


>AY027891-1|AAK15783.1|  801|Anopheles gambiae collagen IV alpha 1
           chain precursor protein.
          Length = 801

 Score = 23.4 bits (48), Expect = 7.0
 Identities = 17/49 (34%), Positives = 19/49 (38%)
 Frame = +2

Query: 536 GRRGEVATRVSPIPSVTRIGRCGVPGRTVPRSLRGNVAPCAHTRSSTSG 682
           G +GEV  R  P     R G  GVPG    R  RG+   C        G
Sbjct: 241 GPQGEVGPRGFP----GRPGEKGVPGTPGVRGERGDKGVCIKGEKGQKG 285



 Score = 23.0 bits (47), Expect = 9.2
 Identities = 12/39 (30%), Positives = 17/39 (43%)
 Frame = +2

Query: 536 GRRGEVATRVSPIPSVTRIGRCGVPGRTVPRSLRGNVAP 652
           G +G+   R   +      G  G+PG+  PR   GN  P
Sbjct: 320 GEKGQAGDR-GQVGERGHKGEKGLPGQPGPRGRDGNFGP 357


>AJ438610-4|CAD27476.1|  593|Anopheles gambiae putative
           transcription factor protein.
          Length = 593

 Score = 23.4 bits (48), Expect = 7.0
 Identities = 8/23 (34%), Positives = 11/23 (47%)
 Frame = -2

Query: 76  PMSWPKCWSGSSLLMTLHPQRPP 8
           P  WP  W+  +    +H Q PP
Sbjct: 356 PTYWPHYWNRFTQSTAMHNQPPP 378


>DQ370045-1|ABD18606.1|  285|Anopheles gambiae putative TIL domain
           protein protein.
          Length = 285

 Score = 23.0 bits (47), Expect = 9.2
 Identities = 11/31 (35%), Positives = 17/31 (54%), Gaps = 4/31 (12%)
 Frame = -2

Query: 676 CAGTCVCTRGYVAP*RSRHC----TTWYPTS 596
           C   CVC +G+V   +  +C    TT+ PT+
Sbjct: 54  CLPGCVCKKGFVRETQFGNCVPVDTTYNPTT 84


>AY135184-1|AAN17505.1| 1009|Anopheles gambiae laccase 1 protein.
          Length = 1009

 Score = 23.0 bits (47), Expect = 9.2
 Identities = 7/16 (43%), Positives = 12/16 (75%)
 Frame = -2

Query: 100  DASRLRPAPMSWPKCW 53
            D+S + PAP ++P C+
Sbjct: 956  DSSEMLPAPANFPTCY 971


>AB090813-2|BAC57902.1| 1099|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1099

 Score = 23.0 bits (47), Expect = 9.2
 Identities = 16/42 (38%), Positives = 18/42 (42%)
 Frame = -2

Query: 466 DGVDDAATRLVDSIRGAIDQATTLVPSGGPRGILPAHLKAII 341
           DGV D A      I G  D    LVP   P  +  A  +AII
Sbjct: 642 DGVLDIALPPDAEILGYADDLVLLVPGTTPDNVKAAAEEAII 683


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 797,576
Number of Sequences: 2352
Number of extensions: 19157
Number of successful extensions: 63
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 51
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 63
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 70668195
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)