Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= prgv0286
(695 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF237761-2|AAF81411.1| 908|Drosophila melanogaster unknown prot... 39 0.007
M22874-2|AAA28675.1| 916|Drosophila melanogaster protein ( D.me... 34 0.16
AY089343-1|AAL90081.2| 718|Drosophila melanogaster AT16518p pro... 34 0.16
AY061181-1|AAL28729.1| 158|Drosophila melanogaster LD14807p pro... 32 0.86
X13331-1|CAA31709.1| 429|Drosophila melanogaster knirps protein... 29 6.0
AY118798-1|AAM50658.1| 429|Drosophila melanogaster GH19318p pro... 29 6.0
AY071545-1|AAL49167.1| 339|Drosophila melanogaster RE58063p pro... 29 6.0
AE014296-3401|AAF51629.2| 429|Drosophila melanogaster CG4717-PA... 29 6.0
AE014296-2339|AAF49775.1| 339|Drosophila melanogaster CG17359-P... 29 6.0
BT024293-1|ABC86355.1| 485|Drosophila melanogaster IP12678p pro... 29 8.0
AY051828-1|AAK93252.1| 912|Drosophila melanogaster LD33361p pro... 29 8.0
AE014298-3010|AAF50913.2| 4899|Drosophila melanogaster CG11734-P... 29 8.0
AE014296-1843|AAN11909.1| 912|Drosophila melanogaster CG32067-P... 29 8.0
AE014296-1842|AAF50141.2| 916|Drosophila melanogaster CG32067-P... 29 8.0
AE014296-1841|AAF50140.1| 916|Drosophila melanogaster CG32067-P... 29 8.0
AE014134-582|AAF51126.1| 485|Drosophila melanogaster CG8837-PA ... 29 8.0
>AF237761-2|AAF81411.1| 908|Drosophila melanogaster unknown
protein.
Length = 908
Score = 38.7 bits (86), Expect = 0.007
Identities = 33/114 (28%), Positives = 48/114 (42%), Gaps = 3/114 (2%)
Frame = -2
Query: 583 DTGNGAHPGCDLAPTTEGRLGAL*ERLVD-LPVIQDPNTPDGVDDAATRLVDSIRGAIDQ 407
D G ++P + T L +L LP+ N+ VDDA L ++I+ A
Sbjct: 221 DAGAISYPKMERLITRRTNLEVFQSQLESTLPLNTAINSGQDVDDAIELLTNNIKSAARL 280
Query: 406 ATTLV--PSGGPRGILPAHLKAIIRRKRGLRRLWATTRCPRIKRELNELEAELR 251
AT + R +P + +I KR LR W +R P K E N + LR
Sbjct: 281 ATRSISRQPAADRIPIPREILLLIAEKRRLRTRWMRSRHPSDKTEWNRALSRLR 334
Score = 32.7 bits (71), Expect = 0.49
Identities = 21/65 (32%), Positives = 30/65 (46%), Gaps = 2/65 (3%)
Frame = -1
Query: 224 AW-QERIEEAR-EDPSSVSLHRLCRQLSNRPAPTCPLVDERGNRCFSAQARADVLAEMLE 51
AW ER+ E ++ SL + R + R PLVD G C + +A+V A L
Sbjct: 343 AWFDERLANTGVESEATHSLWKATRAIKRRCTRKAPLVDSNGTWCRTDLGQAEVFAAHLA 402
Query: 50 RQFAP 36
+F P
Sbjct: 403 ERFQP 407
>M22874-2|AAA28675.1| 916|Drosophila melanogaster protein (
D.melanogaster LINEelement J-1, clone J-1. ).
Length = 916
Score = 34.3 bits (75), Expect = 0.16
Identities = 15/55 (27%), Positives = 30/55 (54%)
Frame = -1
Query: 185 SSVSLHRLCRQLSNRPAPTCPLVDERGNRCFSAQARADVLAEMLERQFAPNDSAP 21
++ SL R+ ++ +P P + + G C ++ + +V A LE++F P + AP
Sbjct: 360 TNYSLWRITKRFKAQPTPKSAIKNPSGGWCRTSLEKTEVFANNLEQRFTPYNYAP 414
>AY089343-1|AAL90081.2| 718|Drosophila melanogaster AT16518p
protein.
Length = 718
Score = 34.3 bits (75), Expect = 0.16
Identities = 15/55 (27%), Positives = 30/55 (54%)
Frame = -1
Query: 185 SSVSLHRLCRQLSNRPAPTCPLVDERGNRCFSAQARADVLAEMLERQFAPNDSAP 21
++ SL R+ ++ +P P + + G C ++ + +V A LE++F P + AP
Sbjct: 162 TNYSLWRITKRFKAQPTPKSAIKNPSGGWCRTSLEKTEVFANNLEQRFTPYNYAP 216
>AY061181-1|AAL28729.1| 158|Drosophila melanogaster LD14807p
protein.
Length = 158
Score = 31.9 bits (69), Expect = 0.86
Identities = 22/65 (33%), Positives = 33/65 (50%), Gaps = 2/65 (3%)
Frame = -2
Query: 367 LPAHLKAIIRRKRGLRRLWATTRCPRIKRELNELEAELRQRLA--PFGAMPGRRGSRRPA 194
+P L ++ R++ L + A + R +R+L + +LRQ L AM R RRP
Sbjct: 17 MPRQLGHLLPRRQ-LPAMTAPRKKRRPRRQLQQRPRQLRQLLPRRQLPAMTAPRKKRRPR 75
Query: 193 RTPPQ 179
R PPQ
Sbjct: 76 RLPPQ 80
>X13331-1|CAA31709.1| 429|Drosophila melanogaster knirps protein
protein.
Length = 429
Score = 29.1 bits (62), Expect = 6.0
Identities = 11/23 (47%), Positives = 15/23 (65%)
Frame = +1
Query: 400 SSPGRSLP*WSQQGGLPHRRPHQ 468
S P +LP +S GG+PH+ P Q
Sbjct: 166 SDPSAALPFFSMMGGVPHQSPFQ 188
>AY118798-1|AAM50658.1| 429|Drosophila melanogaster GH19318p
protein.
Length = 429
Score = 29.1 bits (62), Expect = 6.0
Identities = 11/23 (47%), Positives = 15/23 (65%)
Frame = +1
Query: 400 SSPGRSLP*WSQQGGLPHRRPHQ 468
S P +LP +S GG+PH+ P Q
Sbjct: 166 SDPSAALPFFSMMGGVPHQSPFQ 188
>AY071545-1|AAL49167.1| 339|Drosophila melanogaster RE58063p
protein.
Length = 339
Score = 29.1 bits (62), Expect = 6.0
Identities = 11/32 (34%), Positives = 19/32 (59%)
Frame = +2
Query: 311 PEPPQAPLPANNRLQMGREYTSGPAAGHKSRR 406
P+P +PLP NN ++ + Y+ +KS+R
Sbjct: 143 PKPISSPLPDNNEHKLAQSYSPAKTPHNKSKR 174
>AE014296-3401|AAF51629.2| 429|Drosophila melanogaster CG4717-PA
protein.
Length = 429
Score = 29.1 bits (62), Expect = 6.0
Identities = 11/23 (47%), Positives = 15/23 (65%)
Frame = +1
Query: 400 SSPGRSLP*WSQQGGLPHRRPHQ 468
S P +LP +S GG+PH+ P Q
Sbjct: 166 SDPSAALPFFSMMGGVPHQSPFQ 188
>AE014296-2339|AAF49775.1| 339|Drosophila melanogaster CG17359-PA
protein.
Length = 339
Score = 29.1 bits (62), Expect = 6.0
Identities = 11/32 (34%), Positives = 19/32 (59%)
Frame = +2
Query: 311 PEPPQAPLPANNRLQMGREYTSGPAAGHKSRR 406
P+P +PLP NN ++ + Y+ +KS+R
Sbjct: 143 PKPISSPLPDNNEHKLAQSYSPAKTPHNKSKR 174
>BT024293-1|ABC86355.1| 485|Drosophila melanogaster IP12678p
protein.
Length = 485
Score = 28.7 bits (61), Expect = 8.0
Identities = 19/51 (37%), Positives = 25/51 (49%)
Frame = -2
Query: 361 AHLKAIIRRKRGLRRLWATTRCPRIKRELNELEAELRQRLAPFGAMPGRRG 209
A L+ +R RG+R + + P ELNE AELR R G+ P G
Sbjct: 206 ASLEKSLRWYRGIRDIDDREK-PEYLSELNEFHAELRSRDKNVGSTPMSHG 255
>AY051828-1|AAK93252.1| 912|Drosophila melanogaster LD33361p
protein.
Length = 912
Score = 28.7 bits (61), Expect = 8.0
Identities = 15/43 (34%), Positives = 22/43 (51%)
Frame = +2
Query: 293 GTTSCRPEPPQAPLPANNRLQMGREYTSGPAAGHKSRRLVDRS 421
G+ S P PP++ LPA L G T ++ H+S L R+
Sbjct: 313 GSNSILP-PPRSSLPAGATLAAGTTITPATSSSHRSSNLPPRT 354
>AE014298-3010|AAF50913.2| 4899|Drosophila melanogaster CG11734-PB
protein.
Length = 4899
Score = 28.7 bits (61), Expect = 8.0
Identities = 17/38 (44%), Positives = 20/38 (52%)
Frame = -2
Query: 349 AIIRRKRGLRRLWATTRCPRIKRELNELEAELRQRLAP 236
AI ++RGLRRL R PR K + L ELR P
Sbjct: 1609 AISPQQRGLRRLPILQRPPRFKMLVRRLLQELRSSRQP 1646
>AE014296-1843|AAN11909.1| 912|Drosophila melanogaster CG32067-PC,
isoform C protein.
Length = 912
Score = 28.7 bits (61), Expect = 8.0
Identities = 15/43 (34%), Positives = 22/43 (51%)
Frame = +2
Query: 293 GTTSCRPEPPQAPLPANNRLQMGREYTSGPAAGHKSRRLVDRS 421
G+ S P PP++ LPA L G T ++ H+S L R+
Sbjct: 313 GSNSILP-PPRSSLPAGATLAAGTTITPATSSSHRSSNLPPRT 354
>AE014296-1842|AAF50141.2| 916|Drosophila melanogaster CG32067-PB,
isoform B protein.
Length = 916
Score = 28.7 bits (61), Expect = 8.0
Identities = 15/43 (34%), Positives = 22/43 (51%)
Frame = +2
Query: 293 GTTSCRPEPPQAPLPANNRLQMGREYTSGPAAGHKSRRLVDRS 421
G+ S P PP++ LPA L G T ++ H+S L R+
Sbjct: 313 GSNSILP-PPRSSLPAGATLAAGTTITPATSSSHRSSNLPPRT 354
>AE014296-1841|AAF50140.1| 916|Drosophila melanogaster CG32067-PA,
isoform A protein.
Length = 916
Score = 28.7 bits (61), Expect = 8.0
Identities = 15/43 (34%), Positives = 22/43 (51%)
Frame = +2
Query: 293 GTTSCRPEPPQAPLPANNRLQMGREYTSGPAAGHKSRRLVDRS 421
G+ S P PP++ LPA L G T ++ H+S L R+
Sbjct: 313 GSNSILP-PPRSSLPAGATLAAGTTITPATSSSHRSSNLPPRT 354
>AE014134-582|AAF51126.1| 485|Drosophila melanogaster CG8837-PA
protein.
Length = 485
Score = 28.7 bits (61), Expect = 8.0
Identities = 19/51 (37%), Positives = 25/51 (49%)
Frame = -2
Query: 361 AHLKAIIRRKRGLRRLWATTRCPRIKRELNELEAELRQRLAPFGAMPGRRG 209
A L+ +R RG+R + + P ELNE AELR R G+ P G
Sbjct: 206 ASLEKSLRWYRGIRDIDDREK-PEYLSELNEFHAELRSRDKNVGSTPMSHG 255
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 36,106,296
Number of Sequences: 53049
Number of extensions: 902023
Number of successful extensions: 3489
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 3110
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3485
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3046624548
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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