Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= prgv0283
         (686 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292360-1|CAL23172.2|  427|Tribolium castaneum gustatory recept...    25   0.77 
AM292331-1|CAL23143.2|  437|Tribolium castaneum gustatory recept...    25   0.77 
AM292380-1|CAL23192.2|  489|Tribolium castaneum gustatory recept...    23   1.8  
AM292346-1|CAL23158.2|  314|Tribolium castaneum gustatory recept...    23   1.8  
AF452568-1|AAL57830.1|  243|Tribolium castaneum homeodomain tran...    23   3.1  
AF321227-5|AAK16425.1|  292|Tribolium castaneum Zen2 protein.          23   3.1  
AM292344-1|CAL23156.1|  291|Tribolium castaneum gustatory recept...    22   5.4  
AF322227-1|AAK01654.1|  782|Tribolium castaneum cell surface pro...    22   5.4  
AY316682-1|AAQ83696.1|  456|Tribolium castaneum Sp-like zinc fin...    21   7.2  
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    21   9.5  

>AM292360-1|CAL23172.2|  427|Tribolium castaneum gustatory receptor
           candidate 39 protein.
          Length = 427

 Score = 24.6 bits (51), Expect = 0.77
 Identities = 7/19 (36%), Positives = 15/19 (78%)
 Frame = -3

Query: 249 FSIPSILKCLCSIMWVSCS 193
           + I ++L CLCS+ +++C+
Sbjct: 212 YHILAMLNCLCSLWFINCT 230


>AM292331-1|CAL23143.2|  437|Tribolium castaneum gustatory receptor
           candidate 10 protein.
          Length = 437

 Score = 24.6 bits (51), Expect = 0.77
 Identities = 7/19 (36%), Positives = 15/19 (78%)
 Frame = -3

Query: 249 FSIPSILKCLCSIMWVSCS 193
           + I ++L CLCS+ +++C+
Sbjct: 212 YHILAMLNCLCSLWFINCT 230


>AM292380-1|CAL23192.2|  489|Tribolium castaneum gustatory receptor
           candidate 59 protein.
          Length = 489

 Score = 23.4 bits (48), Expect = 1.8
 Identities = 9/24 (37%), Positives = 14/24 (58%)
 Frame = -3

Query: 261 ISRIFSIPSILKCLCSIMWVSCSL 190
           I  IFS+P ++K     + + CSL
Sbjct: 234 IQTIFSVPLLMKIASQFVGIFCSL 257


>AM292346-1|CAL23158.2|  314|Tribolium castaneum gustatory receptor
           candidate 25 protein.
          Length = 314

 Score = 23.4 bits (48), Expect = 1.8
 Identities = 9/24 (37%), Positives = 14/24 (58%)
 Frame = -3

Query: 261 ISRIFSIPSILKCLCSIMWVSCSL 190
           I  IFS+P ++K     + + CSL
Sbjct: 59  IQTIFSVPLLMKIASQFVGIFCSL 82


>AF452568-1|AAL57830.1|  243|Tribolium castaneum homeodomain
           transcription factor Zen2 protein.
          Length = 243

 Score = 22.6 bits (46), Expect = 3.1
 Identities = 14/39 (35%), Positives = 18/39 (46%)
 Frame = -2

Query: 133 VKEEDLITCNIETEII*SFIAPTHNIIYRYLPKYRILNS 17
           VK+E   TC  +TE    F  P  N  Y+Y   Y   N+
Sbjct: 191 VKDE---TCQYDTESSYQFNDPQFNFNYQYNQAYSNYNN 226


>AF321227-5|AAK16425.1|  292|Tribolium castaneum Zen2 protein.
          Length = 292

 Score = 22.6 bits (46), Expect = 3.1
 Identities = 14/39 (35%), Positives = 18/39 (46%)
 Frame = -2

Query: 133 VKEEDLITCNIETEII*SFIAPTHNIIYRYLPKYRILNS 17
           VK+E   TC  +TE    F  P  N  Y+Y   Y   N+
Sbjct: 211 VKDE---TCQYDTESSYQFNDPQFNFNYQYNQAYSNYNN 246


>AM292344-1|CAL23156.1|  291|Tribolium castaneum gustatory receptor
           candidate 23 protein.
          Length = 291

 Score = 21.8 bits (44), Expect = 5.4
 Identities = 13/28 (46%), Positives = 15/28 (53%)
 Frame = -1

Query: 260 SLAFFLSHQFSNVSVLLCGLVVHYSIVL 177
           S A F    FSN  + L G VV + IVL
Sbjct: 258 SAARFYGIDFSNTFLGLVGAVVTFLIVL 285


>AF322227-1|AAK01654.1|  782|Tribolium castaneum cell surface
           protein chaoptin protein.
          Length = 782

 Score = 21.8 bits (44), Expect = 5.4
 Identities = 9/20 (45%), Positives = 12/20 (60%)
 Frame = -3

Query: 336 FTSSRIPVFSLSVRNAVLMK 277
           F   R P F L+VRN  ++K
Sbjct: 634 FQGVRSPTFHLTVRNTSIIK 653


>AY316682-1|AAQ83696.1|  456|Tribolium castaneum Sp-like zinc finger
           protein protein.
          Length = 456

 Score = 21.4 bits (43), Expect = 7.2
 Identities = 9/25 (36%), Positives = 15/25 (60%)
 Frame = -3

Query: 363 TDMTSSIQYFTSSRIPVFSLSVRNA 289
           TDMT +      ++IP  S++V+ A
Sbjct: 3   TDMTPTAGQLYGAQIPAMSMNVKAA 27


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 21.0 bits (42), Expect = 9.5
 Identities = 7/17 (41%), Positives = 10/17 (58%)
 Frame = -3

Query: 525 SFYDYYIHV*ALCCYIF 475
           ++Y YY  +  LC Y F
Sbjct: 100 TYYFYYAFIILLCVYYF 116


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 155,074
Number of Sequences: 336
Number of extensions: 3330
Number of successful extensions: 14
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18010165
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)