Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= prgv0283
         (686 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC001310-1|AAH01310.1|  232|Homo sapiens chromosome 2 open readi...    36   0.18 
AC012360-2|AAY15011.1|  232|Homo sapiens unknown protein.              36   0.18 

>BC001310-1|AAH01310.1|  232|Homo sapiens chromosome 2 open reading
           frame 49 protein.
          Length = 232

 Score = 35.5 bits (78), Expect = 0.18
 Identities = 23/105 (21%), Positives = 54/105 (51%)
 Frame = +2

Query: 131 NVGKTMAVPHEMLLHPELLSNEQLTHIIEQRHLRIDGIEKMREMTYWTYFINTAFRTDKE 310
           +VG       E+LLHPELLS E L   +EQ+++ ++   ++ + +    ++  A    + 
Sbjct: 4   DVGGRSCTDSELLLHPELLSQEFLLLTLEQKNIAVETDVRVNKDSLTDLYVQHAIPLPQR 63

Query: 311 NTGILEEVKY*IELVISVRSHHDL*IKSKKLDTLRLSESNPLLIY 445
           +   L + ++  +++   R  H++  ++K+  T+      PL+++
Sbjct: 64  D---LPKNRW-GKMMEKKREQHEIKNETKRSSTVDGLRKRPLIVF 104


>AC012360-2|AAY15011.1|  232|Homo sapiens unknown protein.
          Length = 232

 Score = 35.5 bits (78), Expect = 0.18
 Identities = 23/105 (21%), Positives = 54/105 (51%)
 Frame = +2

Query: 131 NVGKTMAVPHEMLLHPELLSNEQLTHIIEQRHLRIDGIEKMREMTYWTYFINTAFRTDKE 310
           +VG       E+LLHPELLS E L   +EQ+++ ++   ++ + +    ++  A    + 
Sbjct: 4   DVGGRSCTDSELLLHPELLSQEFLLLTLEQKNIAVETDVRVNKDSLTDLYVQHAIPLPQR 63

Query: 311 NTGILEEVKY*IELVISVRSHHDL*IKSKKLDTLRLSESNPLLIY 445
           +   L + ++  +++   R  H++  ++K+  T+      PL+++
Sbjct: 64  D---LPKNRW-GKMMEKKREQHEIKNETKRSSTVDGLRKRPLIVF 104


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 91,205,182
Number of Sequences: 237096
Number of extensions: 1758031
Number of successful extensions: 3727
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 3604
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3725
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 7839245960
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)