Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= prgv0283
         (686 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY119574-1|AAM50228.1|  409|Drosophila melanogaster LD03827p pro...    31   1.5  
AE014134-1375|AAF52587.1|  409|Drosophila melanogaster CG7221-PA...    31   1.5  
AE014296-1693|AAF50239.2| 1937|Drosophila melanogaster CG3280-PA...    29   6.0  

>AY119574-1|AAM50228.1|  409|Drosophila melanogaster LD03827p
           protein.
          Length = 409

 Score = 31.1 bits (67), Expect = 1.5
 Identities = 17/47 (36%), Positives = 27/47 (57%), Gaps = 3/47 (6%)
 Frame = -2

Query: 340 IFYLFQNPGIFFVRTERSIDEISP---ISHLSHFFYPINSQMSLFYY 209
           I YL  N G+F +   R++D +     +SHLSHF+  +  + +LF Y
Sbjct: 203 IDYLILNAGVFALPYTRTVDGLETTFQVSHLSHFYLTLQLE-TLFDY 248


>AE014134-1375|AAF52587.1|  409|Drosophila melanogaster CG7221-PA
           protein.
          Length = 409

 Score = 31.1 bits (67), Expect = 1.5
 Identities = 17/47 (36%), Positives = 27/47 (57%), Gaps = 3/47 (6%)
 Frame = -2

Query: 340 IFYLFQNPGIFFVRTERSIDEISP---ISHLSHFFYPINSQMSLFYY 209
           I YL  N G+F +   R++D +     +SHLSHF+  +  + +LF Y
Sbjct: 203 IDYLILNAGVFALPYTRTVDGLETTFQVSHLSHFYLTLQLE-TLFDY 248


>AE014296-1693|AAF50239.2| 1937|Drosophila melanogaster CG3280-PA
           protein.
          Length = 1937

 Score = 29.1 bits (62), Expect = 6.0
 Identities = 15/40 (37%), Positives = 26/40 (65%), Gaps = 2/40 (5%)
 Frame = +1

Query: 442 LLSGHMKRIKLENVTTKCSHMNIIIIKGK--SSMILTLSL 555
           L+S  ++R+K  N+T KCS +   II GK  ++ ++ L+L
Sbjct: 598 LISTTVQRLKCYNMTVKCSKLRRNIISGKHLATTLMVLNL 637


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 28,112,951
Number of Sequences: 53049
Number of extensions: 558608
Number of successful extensions: 1720
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 1669
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1717
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 3013199100
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)