Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= prgv0282
(694 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z95114-1|CAI17910.1| 451|Homo sapiens apolipoprotein L, 2 protein. 31 3.0
Z82215-1|CAI22437.1| 451|Homo sapiens apolipoprotein L, 2 protein. 31 3.0
BC004395-1|AAH04395.1| 337|Homo sapiens apolipoprotein L, 2 pro... 31 3.0
AL031426-1|CAI17902.1| 451|Homo sapiens apolipoprotein L, 2 pro... 31 3.0
AK056938-1|BAB71315.1| 337|Homo sapiens protein ( Homo sapiens ... 31 3.0
AF324230-1|AAK11598.1| 337|Homo sapiens apolipoprotein L-II pro... 31 3.0
AF324224-1|AAK11593.1| 337|Homo sapiens apolipoprotein L-II pro... 31 3.0
AF324223-1|AAK11592.1| 337|Homo sapiens apolipoprotein L-II pro... 31 3.0
AF305429-1|AAL09359.1| 337|Homo sapiens apolipoprotein L2 protein. 31 3.0
AF305225-1|AAK20211.1| 337|Homo sapiens apolipoprotein L2 protein. 31 3.0
AB208990-1|BAD92227.1| 415|Homo sapiens apolipoprotein L2 varia... 31 3.0
>Z95114-1|CAI17910.1| 451|Homo sapiens apolipoprotein L, 2 protein.
Length = 451
Score = 31.5 bits (68), Expect = 3.0
Identities = 12/34 (35%), Positives = 21/34 (61%)
Frame = +3
Query: 111 GSESRPTEEIRREVQSIKLMYNFIVKIHSIKQMG 212
G++S EE+++ Q ++ NF+ KIH + Q G
Sbjct: 415 GAKSESAEELKKRAQELEGKLNFLTKIHEMLQPG 448
>Z82215-1|CAI22437.1| 451|Homo sapiens apolipoprotein L, 2 protein.
Length = 451
Score = 31.5 bits (68), Expect = 3.0
Identities = 12/34 (35%), Positives = 21/34 (61%)
Frame = +3
Query: 111 GSESRPTEEIRREVQSIKLMYNFIVKIHSIKQMG 212
G++S EE+++ Q ++ NF+ KIH + Q G
Sbjct: 415 GAKSESAEELKKRAQELEGKLNFLTKIHEMLQPG 448
>BC004395-1|AAH04395.1| 337|Homo sapiens apolipoprotein L, 2
protein.
Length = 337
Score = 31.5 bits (68), Expect = 3.0
Identities = 12/34 (35%), Positives = 21/34 (61%)
Frame = +3
Query: 111 GSESRPTEEIRREVQSIKLMYNFIVKIHSIKQMG 212
G++S EE+++ Q ++ NF+ KIH + Q G
Sbjct: 301 GAKSESAEELKKRAQELEGKLNFLTKIHEMLQPG 334
>AL031426-1|CAI17902.1| 451|Homo sapiens apolipoprotein L, 2
protein.
Length = 451
Score = 31.5 bits (68), Expect = 3.0
Identities = 12/34 (35%), Positives = 21/34 (61%)
Frame = +3
Query: 111 GSESRPTEEIRREVQSIKLMYNFIVKIHSIKQMG 212
G++S EE+++ Q ++ NF+ KIH + Q G
Sbjct: 415 GAKSESAEELKKRAQELEGKLNFLTKIHEMLQPG 448
>AK056938-1|BAB71315.1| 337|Homo sapiens protein ( Homo sapiens
cDNA FLJ32376 fis, clone SALGL1000157, moderately
similar to APOLIPOPROTEIN L PRECURSOR. ).
Length = 337
Score = 31.5 bits (68), Expect = 3.0
Identities = 12/34 (35%), Positives = 21/34 (61%)
Frame = +3
Query: 111 GSESRPTEEIRREVQSIKLMYNFIVKIHSIKQMG 212
G++S EE+++ Q ++ NF+ KIH + Q G
Sbjct: 301 GAKSESAEELKKRAQELEGKLNFLTKIHEMLQPG 334
>AF324230-1|AAK11598.1| 337|Homo sapiens apolipoprotein L-II
protein.
Length = 337
Score = 31.5 bits (68), Expect = 3.0
Identities = 12/34 (35%), Positives = 21/34 (61%)
Frame = +3
Query: 111 GSESRPTEEIRREVQSIKLMYNFIVKIHSIKQMG 212
G++S EE+++ Q ++ NF+ KIH + Q G
Sbjct: 301 GAKSESAEELKKRAQELEGKLNFLTKIHEMLQPG 334
>AF324224-1|AAK11593.1| 337|Homo sapiens apolipoprotein L-II
protein.
Length = 337
Score = 31.5 bits (68), Expect = 3.0
Identities = 12/34 (35%), Positives = 21/34 (61%)
Frame = +3
Query: 111 GSESRPTEEIRREVQSIKLMYNFIVKIHSIKQMG 212
G++S EE+++ Q ++ NF+ KIH + Q G
Sbjct: 301 GAKSESAEELKKRAQELEGKLNFLTKIHEMLQPG 334
>AF324223-1|AAK11592.1| 337|Homo sapiens apolipoprotein L-II
protein.
Length = 337
Score = 31.5 bits (68), Expect = 3.0
Identities = 12/34 (35%), Positives = 21/34 (61%)
Frame = +3
Query: 111 GSESRPTEEIRREVQSIKLMYNFIVKIHSIKQMG 212
G++S EE+++ Q ++ NF+ KIH + Q G
Sbjct: 301 GAKSESAEELKKRAQELEGKLNFLTKIHEMLQPG 334
>AF305429-1|AAL09359.1| 337|Homo sapiens apolipoprotein L2 protein.
Length = 337
Score = 31.5 bits (68), Expect = 3.0
Identities = 12/34 (35%), Positives = 21/34 (61%)
Frame = +3
Query: 111 GSESRPTEEIRREVQSIKLMYNFIVKIHSIKQMG 212
G++S EE+++ Q ++ NF+ KIH + Q G
Sbjct: 301 GAKSESAEELKKRAQELEGKLNFLTKIHEMLQPG 334
>AF305225-1|AAK20211.1| 337|Homo sapiens apolipoprotein L2 protein.
Length = 337
Score = 31.5 bits (68), Expect = 3.0
Identities = 12/34 (35%), Positives = 21/34 (61%)
Frame = +3
Query: 111 GSESRPTEEIRREVQSIKLMYNFIVKIHSIKQMG 212
G++S EE+++ Q ++ NF+ KIH + Q G
Sbjct: 301 GAKSESAEELKKRAQELEGKLNFLTKIHEMLQPG 334
>AB208990-1|BAD92227.1| 415|Homo sapiens apolipoprotein L2 variant
protein.
Length = 415
Score = 31.5 bits (68), Expect = 3.0
Identities = 12/34 (35%), Positives = 21/34 (61%)
Frame = +3
Query: 111 GSESRPTEEIRREVQSIKLMYNFIVKIHSIKQMG 212
G++S EE+++ Q ++ NF+ KIH + Q G
Sbjct: 379 GAKSESAEELKKRAQELEGKLNFLTKIHEMLQPG 412
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 86,894,572
Number of Sequences: 237096
Number of extensions: 1564028
Number of successful extensions: 1937
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 1903
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1937
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 7951235188
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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