Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= prgv0281
(727 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF036692-9|AAB88330.1| 389|Caenorhabditis elegans Hypothetical ... 38 0.010
AF043700-1|AAB97571.2| 328|Caenorhabditis elegans Hypothetical ... 33 0.27
Z83219-3|CAD57687.1| 965|Caenorhabditis elegans Hypothetical pr... 32 0.36
U58738-4|AAB00604.1| 358|Caenorhabditis elegans Hypothetical pr... 31 0.63
U10438-9|AAU87834.1| 616|Caenorhabditis elegans Hypothetical pr... 31 0.63
AF016663-3|AAC70878.1| 1170|Caenorhabditis elegans Hypothetical ... 31 0.63
Z93390-6|CAB07675.4| 816|Caenorhabditis elegans Hypothetical pr... 31 0.84
Z93390-1|CAE46674.1| 540|Caenorhabditis elegans Hypothetical pr... 31 0.84
Z80214-7|CAC42261.2| 816|Caenorhabditis elegans Hypothetical pr... 31 0.84
AF039052-9|AAF98625.1| 302|Caenorhabditis elegans Hypothetical ... 31 1.1
AF026212-3|AAF99974.2| 1172|Caenorhabditis elegans Hypothetical ... 31 1.1
Z81553-9|CAB04500.2| 663|Caenorhabditis elegans Hypothetical pr... 28 5.9
Z74026-2|CAD54122.1| 588|Caenorhabditis elegans Hypothetical pr... 28 5.9
AL132860-5|CAB60515.1| 798|Caenorhabditis elegans Hypothetical ... 28 5.9
Z83108-6|CAB05512.1| 833|Caenorhabditis elegans Hypothetical pr... 24 6.4
Z50070-13|CAA90402.1| 833|Caenorhabditis elegans Hypothetical p... 24 6.4
Z49911-10|CAA90134.1| 471|Caenorhabditis elegans Hypothetical p... 28 7.8
Z49909-18|CAA90117.1| 471|Caenorhabditis elegans Hypothetical p... 28 7.8
U23527-5|AAC46572.2| 915|Caenorhabditis elegans Hypothetical pr... 28 7.8
AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical ... 23 7.9
>AF036692-9|AAB88330.1| 389|Caenorhabditis elegans Hypothetical
protein C44B12.7 protein.
Length = 389
Score = 37.5 bits (83), Expect = 0.010
Identities = 24/85 (28%), Positives = 44/85 (51%), Gaps = 3/85 (3%)
Frame = -3
Query: 263 RRSPITMFD-QPIPWAPK--VKYLGVTLDSRMTFRPHIKTVRDRAAFILGRLYPMICRRS 93
+++P T++ +P +P + LG+ DS++TF+PHIK + + L R ++
Sbjct: 175 KKNPKTVYKINNLPISPSNIARDLGILTDSKLTFKPHIKKI---VSLALLRCKQLLKSFK 231
Query: 92 KMSLRNKVTLYKTCIRPVMTYASVV 18
+ L+KT I P++ Y S V
Sbjct: 232 SLCPEFYCNLFKTYILPLIEYGSAV 256
>AF043700-1|AAB97571.2| 328|Caenorhabditis elegans Hypothetical
protein K09H9.4 protein.
Length = 328
Score = 32.7 bits (71), Expect = 0.27
Identities = 21/72 (29%), Positives = 33/72 (45%)
Frame = -3
Query: 233 PIPWAPKVKYLGVTLDSRMTFRPHIKTVRDRAAFILGRLYPMICRRSKMSLRNKVTLYKT 54
PI + LG + ++ F H K + A F L ++ +K + + LYKT
Sbjct: 140 PIERKTITRDLGFLISEKLDFSEHWKKSINLAKFQLANIFNQYSTSNKKLM---ILLYKT 196
Query: 53 CIRPVMTYASVV 18
IRP + Y +VV
Sbjct: 197 FIRPRLEYGTVV 208
>Z83219-3|CAD57687.1| 965|Caenorhabditis elegans Hypothetical
protein C31C9.6 protein.
Length = 965
Score = 32.3 bits (70), Expect = 0.36
Identities = 19/57 (33%), Positives = 27/57 (47%)
Frame = -1
Query: 352 STAVLFKRGRPPNTTLSIPLPTRRVNTPAPAVRQSRCSTSPYRGPRRSNI*ASPSTV 182
ST + PP T P P R+ P+P+ + + S SP P I A+PS+V
Sbjct: 449 STGTSYSSTTPPTTPKPAPPPPSRIPNPSPSPQPAEVSKSPPPPPPLPPI-ATPSSV 504
>U58738-4|AAB00604.1| 358|Caenorhabditis elegans Hypothetical
protein F31A9.6 protein.
Length = 358
Score = 31.5 bits (68), Expect = 0.63
Identities = 20/72 (27%), Positives = 33/72 (45%)
Frame = -3
Query: 233 PIPWAPKVKYLGVTLDSRMTFRPHIKTVRDRAAFILGRLYPMICRRSKMSLRNKVTLYKT 54
PI + LG + ++ F H + + A F L ++ +K + + LYKT
Sbjct: 170 PIERKAITRDLGFLISEKLDFSDHWRKCINLAKFQLANMFNKYSTSNKKLM---ILLYKT 226
Query: 53 CIRPVMTYASVV 18
IRP + Y +VV
Sbjct: 227 FIRPRLEYGTVV 238
>U10438-9|AAU87834.1| 616|Caenorhabditis elegans Hypothetical
protein B0280.13 protein.
Length = 616
Score = 31.5 bits (68), Expect = 0.63
Identities = 19/57 (33%), Positives = 27/57 (47%)
Frame = -1
Query: 352 STAVLFKRGRPPNTTLSIPLPTRRVNTPAPAVRQSRCSTSPYRGPRRSNI*ASPSTV 182
ST + PP T P P R+ P+P+ + + S SP P I A+PS+V
Sbjct: 456 STGPSYSSTTPPTTPKPAPPPPSRIPNPSPSPQPAEVSKSPPPPPPLPPI-ATPSSV 511
>AF016663-3|AAC70878.1| 1170|Caenorhabditis elegans Hypothetical
protein F21E9.1 protein.
Length = 1170
Score = 31.5 bits (68), Expect = 0.63
Identities = 22/72 (30%), Positives = 34/72 (47%)
Frame = -3
Query: 233 PIPWAPKVKYLGVTLDSRMTFRPHIKTVRDRAAFILGRLYPMICRRSKMSLRNKVTLYKT 54
PI + V+ LG+ D ++ F HI V + + R ++ S S + LYKT
Sbjct: 969 PITPSSTVRDLGLITDCKLKFEHHIVKV---SCLAMLRSKQILKAFSSNSPKFYAHLYKT 1025
Query: 53 CIRPVMTYASVV 18
+ P+M Y S V
Sbjct: 1026 YVAPIMNYCSEV 1037
>Z93390-6|CAB07675.4| 816|Caenorhabditis elegans Hypothetical
protein T23B5.3a protein.
Length = 816
Score = 31.1 bits (67), Expect = 0.84
Identities = 13/32 (40%), Positives = 16/32 (50%)
Frame = -3
Query: 323 PSEHHAEHPSPD*ARQHPRPRRSPITMFDQPI 228
PS HH +H +QHP P P+ F PI
Sbjct: 26 PSHHHHQHYQLPHLQQHPHPYSYPLYTFPYPI 57
>Z93390-1|CAE46674.1| 540|Caenorhabditis elegans Hypothetical
protein T23B5.3b protein.
Length = 540
Score = 31.1 bits (67), Expect = 0.84
Identities = 13/32 (40%), Positives = 16/32 (50%)
Frame = -3
Query: 323 PSEHHAEHPSPD*ARQHPRPRRSPITMFDQPI 228
PS HH +H +QHP P P+ F PI
Sbjct: 26 PSHHHHQHYQLPHLQQHPHPYSYPLYTFPYPI 57
>Z80214-7|CAC42261.2| 816|Caenorhabditis elegans Hypothetical
protein T23B5.3a protein.
Length = 816
Score = 31.1 bits (67), Expect = 0.84
Identities = 13/32 (40%), Positives = 16/32 (50%)
Frame = -3
Query: 323 PSEHHAEHPSPD*ARQHPRPRRSPITMFDQPI 228
PS HH +H +QHP P P+ F PI
Sbjct: 26 PSHHHHQHYQLPHLQQHPHPYSYPLYTFPYPI 57
>AF039052-9|AAF98625.1| 302|Caenorhabditis elegans Hypothetical
protein T22D1.2 protein.
Length = 302
Score = 30.7 bits (66), Expect = 1.1
Identities = 34/105 (32%), Positives = 41/105 (39%)
Frame = -2
Query: 417 RPQLPPWDSGSGSGASTLTPRKAQRCSSKGVALRTPR*ASLSRLGASTPPPPPFANHDVR 238
RP PP +GS T P Q S++G A R P G TPPPPP
Sbjct: 157 RPPPPPKGTGSPPPPPTGEP---QDLSTEGNASRRP---PPPPKGTGTPPPPPTGE---- 206
Query: 237 PAHTVGPEGQIFRRHPRQ*DDIPPPHQDGTRSCRLHPRTSLPDDM 103
+ EG RR P PPP G+ + P T P D+
Sbjct: 207 -PQDLSAEGYASRRPP------PPPKGTGSPT---PPPTGEPQDL 241
Score = 30.3 bits (65), Expect = 1.5
Identities = 32/90 (35%), Positives = 36/90 (40%)
Frame = -2
Query: 417 RPQLPPWDSGSGSGASTLTPRKAQRCSSKGVALRTPR*ASLSRLGASTPPPPPFANHDVR 238
RP PP +GS + T P Q S +G A R P G +PPPPP
Sbjct: 219 RPPPPPKGTGSPTPPPTGEP---QDLSGEGNASRRP---PPPPKGTGSPPPPPTG----E 268
Query: 237 PAHTVGPEGQIFRRHPRQ*DDIPPPHQDGT 148
P G EG RR P PPP GT
Sbjct: 269 PQDLSG-EGNASRRPP------PPPKGTGT 291
Score = 27.9 bits (59), Expect = 7.8
Identities = 31/101 (30%), Positives = 37/101 (36%)
Frame = -2
Query: 405 PPWDSGSGSGASTLTPRKAQRCSSKGVALRTPR*ASLSRLGASTPPPPPFANHDVRPAHT 226
PP G+G+ T + +G A R P G TPPPPP P
Sbjct: 65 PPPPKGTGTPPPPPTGEPQDLSAEEGNASRRP---PPPPKGTGTPPPPPTG----EPQDL 117
Query: 225 VGPEGQIFRRHPRQ*DDIPPPHQDGTRSCRLHPRTSLPDDM 103
G EG RR P PPP G+ P T P D+
Sbjct: 118 SG-EGNASRRPP------PPPKGTGSPP---PPPTGEPQDL 148
>AF026212-3|AAF99974.2| 1172|Caenorhabditis elegans Hypothetical
protein F52G3.1 protein.
Length = 1172
Score = 30.7 bits (66), Expect = 1.1
Identities = 17/49 (34%), Positives = 23/49 (46%), Gaps = 2/49 (4%)
Frame = -2
Query: 282 ASTPPPPPFANHDVRPAHTV--GPEGQIFRRHPRQ*DDIPPPHQDGTRS 142
A PPPPP +D+RP+ V E Q R+ + PP D +S
Sbjct: 107 AVPPPPPPQPANDLRPSWLVAANAEQQANNSQAREFPSLAPPANDSDKS 155
>Z81553-9|CAB04500.2| 663|Caenorhabditis elegans Hypothetical
protein F56H6.11 protein.
Length = 663
Score = 28.3 bits (60), Expect = 5.9
Identities = 13/42 (30%), Positives = 23/42 (54%)
Frame = +3
Query: 276 LTRLVGRGMLSVVFGGRPLLKSTAVLFVGLMSMRHFRNHCPM 401
LT VG G+L ++ PLL + + ++G +S + H P+
Sbjct: 275 LTATVGTGLLMLLSENNPLLSNKVLTYIGDISYSLYLVHWPI 316
>Z74026-2|CAD54122.1| 588|Caenorhabditis elegans Hypothetical
protein B0240.4 protein.
Length = 588
Score = 28.3 bits (60), Expect = 5.9
Identities = 11/25 (44%), Positives = 16/25 (64%)
Frame = -3
Query: 296 SPD*ARQHPRPRRSPITMFDQPIPW 222
SP+ PR ++ PIT+FDQ + W
Sbjct: 45 SPNRTVSSPRVQQKPITIFDQIVDW 69
>AL132860-5|CAB60515.1| 798|Caenorhabditis elegans Hypothetical
protein Y56A3A.6 protein.
Length = 798
Score = 28.3 bits (60), Expect = 5.9
Identities = 23/76 (30%), Positives = 32/76 (42%), Gaps = 1/76 (1%)
Frame = -1
Query: 427 RRLQTAATTMGQWFRKWRIDINPTKSTAVLFKRGRP-PNTTLSIPLPTRRVNTPAPAVRQ 251
R+ Q AT +RK +PT L P P T I P ++V +PAP +
Sbjct: 580 RKSQVTATQSPVSYRKIP-PTSPTPQRRPLNNTEVPSPVTYRKISAPVQKVTSPAPPAAR 638
Query: 250 SRCSTSPYRGPRRSNI 203
S + P RRS +
Sbjct: 639 SVSTDQPPPANRRSQV 654
>Z83108-6|CAB05512.1| 833|Caenorhabditis elegans Hypothetical
protein F43G6.9 protein.
Length = 833
Score = 23.8 bits (49), Expect(2) = 6.4
Identities = 20/63 (31%), Positives = 25/63 (39%), Gaps = 9/63 (14%)
Frame = -2
Query: 291 RLGASTPPPPPF----ANHDVRP--AHTVGPEGQI---FRRHPRQ*DDIPPPHQDGTRSC 139
+L PPPPPF NH P H + + I R++ Q PH G R
Sbjct: 361 QLPMGVPPPPPFLFQLLNHYRNPQLVHAMIMQSSIPPNIRQNGPQFSHPSGPHSPGNRVQ 420
Query: 138 RLH 130
R H
Sbjct: 421 RKH 423
Score = 22.6 bits (46), Expect(2) = 6.4
Identities = 10/38 (26%), Positives = 15/38 (39%)
Frame = -2
Query: 510 PGLRRPIWRSSPMTPPSTTRVGRRRCFIDDFRPQLPPW 397
P + + PM PP ++ R F P +P W
Sbjct: 315 PSMGTSMPHMGPMMPPQNMQLPRLPPLNPQFLPLIPVW 352
>Z50070-13|CAA90402.1| 833|Caenorhabditis elegans Hypothetical
protein F43G6.9 protein.
Length = 833
Score = 23.8 bits (49), Expect(2) = 6.4
Identities = 20/63 (31%), Positives = 25/63 (39%), Gaps = 9/63 (14%)
Frame = -2
Query: 291 RLGASTPPPPPF----ANHDVRP--AHTVGPEGQI---FRRHPRQ*DDIPPPHQDGTRSC 139
+L PPPPPF NH P H + + I R++ Q PH G R
Sbjct: 361 QLPMGVPPPPPFLFQLLNHYRNPQLVHAMIMQSSIPPNIRQNGPQFSHPSGPHSPGNRVQ 420
Query: 138 RLH 130
R H
Sbjct: 421 RKH 423
Score = 22.6 bits (46), Expect(2) = 6.4
Identities = 10/38 (26%), Positives = 15/38 (39%)
Frame = -2
Query: 510 PGLRRPIWRSSPMTPPSTTRVGRRRCFIDDFRPQLPPW 397
P + + PM PP ++ R F P +P W
Sbjct: 315 PSMGTSMPHMGPMMPPQNMQLPRLPPLNPQFLPLIPVW 352
>Z49911-10|CAA90134.1| 471|Caenorhabditis elegans Hypothetical
protein C14A4.13 protein.
Length = 471
Score = 27.9 bits (59), Expect = 7.8
Identities = 25/79 (31%), Positives = 34/79 (43%), Gaps = 9/79 (11%)
Frame = -2
Query: 369 TLTPRKAQ-RCSSKGVALRTPR*ASLSRLGASTP--------PPPPFANHDVRPAHTVGP 217
+L P+ AQ RCS++ L TP + S +G +T P PP H VR A V
Sbjct: 397 SLKPQLAQQRCSAEHKDLSTPPAIARSPIGQNTTMKPPVTAIPRPPIEKHSVRKAAPVAH 456
Query: 216 EGQIFRRHPRQ*DDIPPPH 160
R + +PP H
Sbjct: 457 S----PRKSKSNTKVPPAH 471
>Z49909-18|CAA90117.1| 471|Caenorhabditis elegans Hypothetical
protein C14A4.13 protein.
Length = 471
Score = 27.9 bits (59), Expect = 7.8
Identities = 25/79 (31%), Positives = 34/79 (43%), Gaps = 9/79 (11%)
Frame = -2
Query: 369 TLTPRKAQ-RCSSKGVALRTPR*ASLSRLGASTP--------PPPPFANHDVRPAHTVGP 217
+L P+ AQ RCS++ L TP + S +G +T P PP H VR A V
Sbjct: 397 SLKPQLAQQRCSAEHKDLSTPPAIARSPIGQNTTMKPPVTAIPRPPIEKHSVRKAAPVAH 456
Query: 216 EGQIFRRHPRQ*DDIPPPH 160
R + +PP H
Sbjct: 457 S----PRKSKSNTKVPPAH 471
>U23527-5|AAC46572.2| 915|Caenorhabditis elegans Hypothetical
protein K09E2.1 protein.
Length = 915
Score = 27.9 bits (59), Expect = 7.8
Identities = 13/39 (33%), Positives = 25/39 (64%), Gaps = 2/39 (5%)
Frame = -1
Query: 319 PNTTLSIPLPTRRVNTPAPA--VRQSRCSTSPYRGPRRS 209
P+TT S+ +P+ + TP+P+ ++S +TS PR++
Sbjct: 583 PSTTTSVTVPSTQKATPSPSRTTKKSTTTTSTTATPRQA 621
>AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical
protein F59E12.9 protein.
Length = 1621
Score = 23.4 bits (48), Expect(2) = 7.9
Identities = 12/38 (31%), Positives = 16/38 (42%), Gaps = 1/38 (2%)
Frame = -2
Query: 273 PPPPPFANHDVRPAHTVGPEGQIFRRHPRQ*D-DIPPP 163
PPPPP + D+ P P + P +PPP
Sbjct: 1342 PPPPPPPSDDLTPVPPPPPPPPTMSKAPTGVPLPVPPP 1379
Score = 22.6 bits (46), Expect(2) = 7.9
Identities = 8/14 (57%), Positives = 10/14 (71%)
Frame = -2
Query: 300 SLSRLGASTPPPPP 259
S SR + +PPPPP
Sbjct: 1329 STSRSSSPSPPPPP 1342
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,016,073
Number of Sequences: 27780
Number of extensions: 484640
Number of successful extensions: 1993
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 1663
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1981
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1708383636
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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