Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= prgv0281
(727 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At2g44710.1 68415.m05564 RNA recognition motif (RRM)-containing ... 33 0.19
At5g54050.1 68418.m06722 DC1 domain-containing protein 32 0.45
At1g31810.1 68414.m03904 formin homology 2 domain-containing pro... 32 0.45
At1g16610.2 68414.m01990 arginine/serine-rich protein, putative ... 31 0.59
At1g16610.1 68414.m01989 arginine/serine-rich protein, putative ... 31 0.59
At3g21270.1 68416.m02688 Dof-type zinc finger domain-containing ... 31 1.0
At2g41210.1 68415.m05089 phosphatidylinositol-4-phosphate 5-kina... 31 1.0
At1g61080.1 68414.m06877 proline-rich family protein 29 2.4
At5g51300.2 68418.m06360 splicing factor-related contains simila... 29 4.1
At5g51300.1 68418.m06359 splicing factor-related contains simila... 29 4.1
At2g32600.1 68415.m03980 hydroxyproline-rich glycoprotein family... 29 4.1
At1g28290.1 68414.m03472 pollen Ole e 1 allergen and extensin fa... 29 4.1
At3g63070.1 68416.m07084 PWWP domain-containing protein putative... 28 5.5
At5g15870.1 68418.m01857 glycosyl hydrolase family 81 protein si... 28 7.2
At3g63180.1 68416.m07097 expressed protein 28 7.2
At1g70640.1 68414.m08143 octicosapeptide/Phox/Bem1p (PB1) domain... 28 7.2
At1g59453.1 68414.m06679 transcription factor-related weak simil... 28 7.2
At1g49475.1 68414.m05545 transcriptional factor B3 family protei... 28 7.2
At5g54062.1 68418.m06725 hypothetical protein 27 9.6
At4g02650.1 68417.m00360 epsin N-terminal homology (ENTH) domain... 27 9.6
At3g19430.1 68416.m02464 late embryogenesis abundant protein-rel... 27 9.6
At2g46700.1 68415.m05827 calcium-dependent protein kinase, putat... 27 9.6
At2g29210.1 68415.m03550 splicing factor PWI domain-containing p... 27 9.6
At1g62440.1 68414.m07044 leucine-rich repeat family protein / ex... 27 9.6
At1g55370.2 68414.m06331 expressed protein 27 9.6
At1g55370.1 68414.m06330 expressed protein 27 9.6
At1g23720.1 68414.m02994 proline-rich extensin-like family prote... 27 9.6
>At2g44710.1 68415.m05564 RNA recognition motif (RRM)-containing
protein
Length = 809
Score = 33.1 bits (72), Expect = 0.19
Identities = 19/55 (34%), Positives = 29/55 (52%), Gaps = 2/55 (3%)
Frame = -2
Query: 273 PPPPPFANHDVRPAHTVGPEGQIFRRHPRQ*DDIPPPHQDG--TRSCRLHPRTSL 115
P PPP ++D RP + P+ + R + R+ D++PPP + S RL P L
Sbjct: 569 PLPPPARSYDRRPPVPLYPKASLKRDYDRR-DELPPPRSRPAVSYSSRLSPERHL 622
>At5g54050.1 68418.m06722 DC1 domain-containing protein
Length = 580
Score = 31.9 bits (69), Expect = 0.45
Identities = 12/37 (32%), Positives = 25/37 (67%), Gaps = 1/37 (2%)
Frame = -1
Query: 718 QIWHNGLIYKCITWECQNRLVFIIR-DYLSKPFRSDI 611
+I+ +G IY+C+ +C+N+ + +R +S+PF D+
Sbjct: 383 RIYTDGFIYECLHEDCENKNAYDVRCSSVSEPFHHDL 419
>At1g31810.1 68414.m03904 formin homology 2 domain-containing
protein / FH2 domain-containing protein low similarity
to SP|P48608 Diaphanous protein {Drosophila
melanogaster}; contains Pfam profile PF02181: Formin
Homology 2(FH2) Domain
Length = 1201
Score = 31.9 bits (69), Expect = 0.45
Identities = 30/92 (32%), Positives = 37/92 (40%), Gaps = 9/92 (9%)
Frame = -2
Query: 507 GLRRPIWRSSPMTPPSTTRVGRRRCFIDDFRPQLPPWDSGSGS---GASTLTPR------ 355
G +R P PP TR+ +C P PP S SGS G + P
Sbjct: 632 GNKRQAQPPPPPPPPPPTRIPAAKCAPP---PPPPPPTSHSGSIRVGPPSTPPPPPPPPP 688
Query: 354 KAQRCSSKGVALRTPR*ASLSRLGASTPPPPP 259
KA ++ P S +RLGA PPPPP
Sbjct: 689 KANISNAPKPPAPPPLPPSSTRLGAPPPPPPP 720
>At1g16610.2 68414.m01990 arginine/serine-rich protein, putative
(SR45) similar to arginine/serine-rich protein
GI:6601502 from [Arabidopsis thaliana]
Length = 407
Score = 31.5 bits (68), Expect = 0.59
Identities = 19/45 (42%), Positives = 22/45 (48%)
Frame = -2
Query: 393 SGSGSGASTLTPRKAQRCSSKGVALRTPR*ASLSRLGASTPPPPP 259
S S S + PRK R S LR R +S S +S PPPPP
Sbjct: 359 SYSSSPSPRRIPRKISRSRSPKRPLRGKRSSSNSSSSSSPPPPPP 403
>At1g16610.1 68414.m01989 arginine/serine-rich protein, putative
(SR45) similar to arginine/serine-rich protein
GI:6601502 from [Arabidopsis thaliana]
Length = 414
Score = 31.5 bits (68), Expect = 0.59
Identities = 19/45 (42%), Positives = 22/45 (48%)
Frame = -2
Query: 393 SGSGSGASTLTPRKAQRCSSKGVALRTPR*ASLSRLGASTPPPPP 259
S S S + PRK R S LR R +S S +S PPPPP
Sbjct: 366 SYSSSPSPRRIPRKISRSRSPKRPLRGKRSSSNSSSSSSPPPPPP 410
>At3g21270.1 68416.m02688 Dof-type zinc finger domain-containing
protein (ADOF2) identical to Dof zinc finger protein
ADOF2 GI:3608263 from [Arabidopsis thaliana]; identical
to cDNA adof2 mRNA for Dof zinc finger protein
GI:3608262; contains Pfam profile PF02701: Dof domain,
zinc finger
Length = 204
Score = 30.7 bits (66), Expect = 1.0
Identities = 21/70 (30%), Positives = 35/70 (50%)
Frame = +2
Query: 419 KSSMKQRLLPTRVVDGGVIGEERQMGLRRPGISLIYKLNSNGERAELAGXRL*RDGAGNA 598
++S K L PTR++ G IG++ G+ G L +N + L G + DG+G
Sbjct: 115 RNSQKPDLDPTRMLYGFPIGDQDVKGMEIGG--SFSSLLANNMQLGLGGGGIMLDGSGWD 172
Query: 599 FPRLDIGTKR 628
P + +G +R
Sbjct: 173 HPGMGLGLRR 182
>At2g41210.1 68415.m05089 phosphatidylinositol-4-phosphate 5-kinase
family protein similar to
phosphatidylinositol-4-phosphate 5-kinase AtPIP5K1
[Arabidopsis thaliana] GI:3702691; contains Pfam
profiles PF01504: Phosphatidylinositol-4-phosphate
5-Kinase, PF02493: MORN repeat
Length = 772
Score = 30.7 bits (66), Expect = 1.0
Identities = 14/35 (40%), Positives = 22/35 (62%)
Frame = -2
Query: 261 PFANHDVRPAHTVGPEGQIFRRHPRQ*DDIPPPHQ 157
P A+ D++P+ P+ +I+RR PR+ PPHQ
Sbjct: 402 PAASLDLKPS-AFDPKDKIWRRFPREGTKYTPPHQ 435
>At1g61080.1 68414.m06877 proline-rich family protein
Length = 907
Score = 29.5 bits (63), Expect = 2.4
Identities = 19/60 (31%), Positives = 25/60 (41%)
Frame = -2
Query: 414 PQLPPWDSGSGSGASTLTPRKAQRCSSKGVALRTPR*ASLSRLGASTPPPPPFANHDVRP 235
P PP +G+ P A + G PR + GA+ PPPPP A +RP
Sbjct: 592 PPPPPMPLANGATPPPPPPPMAMANGAAGPPPPPPRMGMAN--GAAGPPPPPGAARSLRP 649
>At5g51300.2 68418.m06360 splicing factor-related contains
similarity to SF1 protein [Drosophila melanogaster]
GI:6687400
Length = 804
Score = 28.7 bits (61), Expect = 4.1
Identities = 18/54 (33%), Positives = 22/54 (40%)
Frame = -2
Query: 273 PPPPPFANHDVRPAHTVGPEGQIFRRHPRQ*DDIPPPHQDGTRSCRLHPRTSLP 112
PPPPP + H V H + P G + P PPP S P+ S P
Sbjct: 618 PPPPPGSYHPVHGQH-MPPYGMQYPPPPPHVTQAPPPGTTQNPSSS-EPQQSFP 669
>At5g51300.1 68418.m06359 splicing factor-related contains
similarity to SF1 protein [Drosophila melanogaster]
GI:6687400
Length = 804
Score = 28.7 bits (61), Expect = 4.1
Identities = 18/54 (33%), Positives = 22/54 (40%)
Frame = -2
Query: 273 PPPPPFANHDVRPAHTVGPEGQIFRRHPRQ*DDIPPPHQDGTRSCRLHPRTSLP 112
PPPPP + H V H + P G + P PPP S P+ S P
Sbjct: 618 PPPPPGSYHPVHGQH-MPPYGMQYPPPPPHVTQAPPPGTTQNPSSS-EPQQSFP 669
>At2g32600.1 68415.m03980 hydroxyproline-rich glycoprotein family
protein similar to SWISS-PROT:Q15428
Length = 277
Score = 28.7 bits (61), Expect = 4.1
Identities = 12/25 (48%), Positives = 13/25 (52%)
Frame = -2
Query: 285 GASTPPPPPFANHDVRPAHTVGPEG 211
G PPPPP AN+ RP G G
Sbjct: 249 GLFPPPPPPMANNGFRPMPPAGGFG 273
>At1g28290.1 68414.m03472 pollen Ole e 1 allergen and extensin
family protein similar to arabinogalactan protein
[Daucus carota] GI:11322245; contains Pfam profile
PF01190: Pollen proteins Ole e I family
Length = 359
Score = 28.7 bits (61), Expect = 4.1
Identities = 20/67 (29%), Positives = 24/67 (35%)
Frame = -3
Query: 407 YHHGTVVPEVAHRH*PHEKHSGALQKGSPSEHHAEHPSPD*ARQHPRPRRSPITMFDQPI 228
YHHG P H H PH SP + + P A+ +P P T
Sbjct: 43 YHHGHHHPHPPHHHHPHPHPHPHPPAKSPVKPPVKAPVSPPAKPPVKPPVYPPTKAPVKP 102
Query: 227 PWAPKVK 207
P P VK
Sbjct: 103 PTKPPVK 109
>At3g63070.1 68416.m07084 PWWP domain-containing protein putative
transcription factor HUA2, Arabidopsis thaliana,
EMBL:AF116556
Length = 1347
Score = 28.3 bits (60), Expect = 5.5
Identities = 22/72 (30%), Positives = 35/72 (48%)
Frame = -2
Query: 405 PPWDSGSGSGASTLTPRKAQRCSSKGVALRTPR*ASLSRLGASTPPPPPFANHDVRPAHT 226
PPW+ G S AS +T + R S+ L P S + +S+PP P N + +++
Sbjct: 1092 PPWEGG--SSASAITDQADNRESAN--CLLVPG-TSHQNVTSSSPPARPSQNAQLAMSNS 1146
Query: 225 VGPEGQIFRRHP 190
G +RR+P
Sbjct: 1147 YS-NGFDYRRNP 1157
>At5g15870.1 68418.m01857 glycosyl hydrolase family 81 protein
similar to beta-glucan-elicitor receptor GI:1752734 from
[Glycine max]
Length = 745
Score = 27.9 bits (59), Expect = 7.2
Identities = 15/49 (30%), Positives = 24/49 (48%), Gaps = 1/49 (2%)
Frame = -1
Query: 331 RGRPPNTTLSIPLPTRRVNTPAPAVRQSRCSTSPYRGPRR-SNI*ASPS 188
+ RPP+ +PLP P+ + SR +P+ PR S++ PS
Sbjct: 21 KNRPPSPPPPLPLPPSPSPPPSQQMSSSRQKNTPFLFPRSDSSVLPDPS 69
>At3g63180.1 68416.m07097 expressed protein
Length = 978
Score = 27.9 bits (59), Expect = 7.2
Identities = 33/131 (25%), Positives = 49/131 (37%), Gaps = 2/131 (1%)
Frame = -1
Query: 595 VPGPVTSQPXSRKLRPLPVTIQFVYQRYTRSPETHLALFADDTAIYYSCRKKALLHRRLQ 416
VP P P + L+P+ V + R T+SP HLA+ + + +
Sbjct: 536 VPAPAFIYPANHHLQPVMVPSKS--SRPTKSP--HLAVGLASANFSHPSSSASEVSSPYL 591
Query: 415 TAATTMGQWFRKWRIDINPTKSTAVLFKRGR--PPNTTLSIPLPTRRVNTPAPAVRQSRC 242
T F+ T S AV F G P P P +R + + S C
Sbjct: 592 TVIPNNAYSFQLSSTIRGGTPSQAVPFYNGSFYSPQMFQQPPQPLQRQSQAQRESKASSC 651
Query: 241 STSPYRGPRRS 209
S+S +R P+ S
Sbjct: 652 SSSSHRQPQVS 662
>At1g70640.1 68414.m08143 octicosapeptide/Phox/Bem1p (PB1)
domain-containing protein contains Pfam profile PF00564:
PB1 domain
Length = 174
Score = 27.9 bits (59), Expect = 7.2
Identities = 16/58 (27%), Positives = 28/58 (48%)
Frame = -1
Query: 382 KWRIDINPTKSTAVLFKRGRPPNTTLSIPLPTRRVNTPAPAVRQSRCSTSPYRGPRRS 209
K + ++P KST PP+TT S +R + P+P+ ++ C + R R +
Sbjct: 100 KIHVFLSPLKSTRTTANSSPPPSTTSSSSSKSRSRSPPSPSTPET-CPSCVERSIRNN 156
>At1g59453.1 68414.m06679 transcription factor-related weak
similarity to TFIIIC Box B-binding subunit [Homo
sapiens] GI:442362
Length = 1729
Score = 27.9 bits (59), Expect = 7.2
Identities = 12/25 (48%), Positives = 14/25 (56%)
Frame = -2
Query: 453 RVGRRRCFIDDFRPQLPPWDSGSGS 379
RV CF+ D+ LP WDS S S
Sbjct: 649 RVKLLHCFLWDYFSSLPGWDSASSS 673
>At1g49475.1 68414.m05545 transcriptional factor B3 family protein
contains Pfam profile PF02362: B3 DNA binding domain
Length = 250
Score = 27.9 bits (59), Expect = 7.2
Identities = 10/25 (40%), Positives = 16/25 (64%)
Frame = -1
Query: 616 DIESRERVPGPVTSQPXSRKLRPLP 542
++ + R PGP+TS R+L+P P
Sbjct: 3 NMHTNRRSPGPITSAATQRRLKPEP 27
>At5g54062.1 68418.m06725 hypothetical protein
Length = 207
Score = 27.5 bits (58), Expect = 9.6
Identities = 12/30 (40%), Positives = 16/30 (53%)
Frame = -3
Query: 587 PRHVTAXFPQAPPSPRYYSVCISTIYPVSG 498
P H T FP P SP + C+S++ V G
Sbjct: 116 PAHKTPQFPVIPGSPIDLTKCLSSLVNVQG 145
>At4g02650.1 68417.m00360 epsin N-terminal homology (ENTH)
domain-containing protein / clathrin assembly
protein-related contains Pfam PF01417: ENTH domain. ENTH
(Epsin N-terminal homology) domain; similar to Chain A,
Calm-N N-Terminal Domain Of Clathrin Assembly Lymphoid
Myeloid Leukaemia Protein, Pi(4,5)p2 Complex
(GP:13399999) {Homo sapiens}; supporting cDNA
gi|26451912|dbj|AK118440.1|
Length = 611
Score = 27.5 bits (58), Expect = 9.6
Identities = 13/26 (50%), Positives = 14/26 (53%)
Frame = +2
Query: 236 GRTS*LANGGGGGVDAPSRERDAQRG 313
GR +GGGGG D S E D RG
Sbjct: 158 GRRGKKKSGGGGGGDGDSGEEDDHRG 183
>At3g19430.1 68416.m02464 late embryogenesis abundant
protein-related / LEA protein-related similar to late
embryogenesis abundant protein [Picea glauca] GI:1350543
Length = 559
Score = 27.5 bits (58), Expect = 9.6
Identities = 14/35 (40%), Positives = 17/35 (48%)
Frame = -1
Query: 322 PPNTTLSIPLPTRRVNTPAPAVRQSRCSTSPYRGP 218
PP T S+P PT V+ P P S S +P P
Sbjct: 101 PPTPTPSVPSPTPPVSPPPPTPTPSVPSPTPPVSP 135
Score = 27.5 bits (58), Expect = 9.6
Identities = 14/35 (40%), Positives = 17/35 (48%)
Frame = -1
Query: 322 PPNTTLSIPLPTRRVNTPAPAVRQSRCSTSPYRGP 218
PP T S+P PT V+ P P S S +P P
Sbjct: 119 PPTPTPSVPSPTPPVSPPPPTPTPSVPSPTPPVSP 153
>At2g46700.1 68415.m05827 calcium-dependent protein kinase, putative
/ CDPK, putative similar to calcium/calmodulin-dependent
protein kinase homolog MCK1 [Zea mays]
gi|1839597|gb|AAB47181
Length = 595
Score = 27.5 bits (58), Expect = 9.6
Identities = 14/54 (25%), Positives = 22/54 (40%)
Frame = -3
Query: 326 SPSEHHAEHPSPD*ARQHPRPRRSPITMFDQPIPWAPKVKYLGVTLDSRMTFRP 165
SP H + P P P +P F +P P K++ +L R+ +P
Sbjct: 59 SPFPHGSASPLPSGVSPSPARTSTPRRFFRRPFPPPSPAKHIKASLIKRLGVKP 112
>At2g29210.1 68415.m03550 splicing factor PWI domain-containing
protein contains Pfam profile PF01480: PWI domain
Length = 878
Score = 27.5 bits (58), Expect = 9.6
Identities = 19/63 (30%), Positives = 29/63 (46%), Gaps = 7/63 (11%)
Frame = -1
Query: 298 PLPTRRVNTPAPAVRQSRCSTSP---YRGP----RRSNI*ASPSTVG*HSAPTSRRYAIV 140
P P+RR +P+P R+ R + P R P RR P+ +P +RR+
Sbjct: 304 PAPSRRRRSPSPPARRRRSPSPPARRRRSPSPPARRHRSPTPPARQRRSPSPPARRHRSP 363
Query: 139 PPS 131
PP+
Sbjct: 364 PPA 366
>At1g62440.1 68414.m07044 leucine-rich repeat family protein /
extensin family protein similar to extensin-like protein
[Lycopersicon esculentum] gi|5917664|gb|AAD55979;
contains leucine-rich repeats, Pfam:PF00560; contains
proline rich extensin domains, INTERPRO:IPR002965
Length = 826
Score = 27.5 bits (58), Expect = 9.6
Identities = 21/86 (24%), Positives = 29/86 (33%)
Frame = -2
Query: 420 FRPQLPPWDSGSGSGASTLTPRKAQRCSSKGVALRTPR*ASLSRLGASTPPPPPFANHDV 241
FR PP S P + + S A P + +S + PPPPP ++
Sbjct: 452 FRATPPPPSSKMSPSFRATPPPPSSKMSPSFRATPPPPSSKMSPSVKAYPPPPPPPEYEP 511
Query: 240 RPAHTVGPEGQIFRRHPRQ*DDIPPP 163
P R +P PPP
Sbjct: 512 SPPPPSSEMSPSVRAYPPPPPLSPPP 537
>At1g55370.2 68414.m06331 expressed protein
Length = 354
Score = 27.5 bits (58), Expect = 9.6
Identities = 12/34 (35%), Positives = 17/34 (50%)
Frame = -1
Query: 718 QIWHNGLIYKCITWECQNRLVFIIRDYLSKPFRS 617
++WH G + TW Q +IR +S FRS
Sbjct: 110 RVWHGGKVELLHTWVEQEEEEVVIRGGVSSAFRS 143
>At1g55370.1 68414.m06330 expressed protein
Length = 308
Score = 27.5 bits (58), Expect = 9.6
Identities = 12/34 (35%), Positives = 17/34 (50%)
Frame = -1
Query: 718 QIWHNGLIYKCITWECQNRLVFIIRDYLSKPFRS 617
++WH G + TW Q +IR +S FRS
Sbjct: 110 RVWHGGKVELLHTWVEQEEEEVVIRGGVSSAFRS 143
>At1g23720.1 68414.m02994 proline-rich extensin-like family protein
contains proline-rich extensin domains,
INTERPRO:IPR002965
Length = 895
Score = 27.5 bits (58), Expect = 9.6
Identities = 9/29 (31%), Positives = 16/29 (55%)
Frame = -2
Query: 276 TPPPPPFANHDVRPAHTVGPEGQIFRRHP 190
+PPPPP+ + +PA+ P ++ P
Sbjct: 566 SPPPPPYYSPSPKPAYKSSPPPYVYSSPP 594
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,006,229
Number of Sequences: 28952
Number of extensions: 457756
Number of successful extensions: 1823
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 1451
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1789
length of database: 12,070,560
effective HSP length: 79
effective length of database: 9,783,352
effective search space used: 1584903024
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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