Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= prgv0279
         (685 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory recept...    23   1.8  
AM292365-1|CAL23177.1|  313|Tribolium castaneum gustatory recept...    21   7.1  
AM292325-1|CAL23137.2|  309|Tribolium castaneum gustatory recept...    21   7.1  
AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory recept...    21   9.4  
AM292363-1|CAL23175.2|  347|Tribolium castaneum gustatory recept...    21   9.4  

>AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory receptor
           candidate 61 protein.
          Length = 670

 Score = 23.4 bits (48), Expect = 1.8
 Identities = 14/38 (36%), Positives = 25/38 (65%), Gaps = 1/38 (2%)
 Frame = -3

Query: 557 STFLNVL-FIVTLTKNMRIFIIIFKQLI*NLH*QSFTN 447
           +TF  +L F+V+L+ N  +FI++   +I  +H +SF N
Sbjct: 76  NTFAKLLIFVVSLSGNSAVFIML---IISFMHKKSFKN 110


>AM292365-1|CAL23177.1|  313|Tribolium castaneum gustatory receptor
           candidate 44 protein.
          Length = 313

 Score = 21.4 bits (43), Expect = 7.1
 Identities = 7/19 (36%), Positives = 12/19 (63%)
 Frame = +2

Query: 602 GKSYFFKYSSYFLVYVVGN 658
           G S++F  S++F  +  GN
Sbjct: 236 GVSFYFFISTFFYFFTTGN 254


>AM292325-1|CAL23137.2|  309|Tribolium castaneum gustatory receptor
           candidate 4 protein.
          Length = 309

 Score = 21.4 bits (43), Expect = 7.1
 Identities = 7/19 (36%), Positives = 12/19 (63%)
 Frame = +2

Query: 602 GKSYFFKYSSYFLVYVVGN 658
           G S++F  S++F  +  GN
Sbjct: 232 GVSFYFFISTFFYFFTTGN 250


>AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory receptor
           candidate 51 protein.
          Length = 771

 Score = 21.0 bits (42), Expect = 9.4
 Identities = 9/21 (42%), Positives = 14/21 (66%)
 Frame = -3

Query: 557 STFLNVLFIVTLTKNMRIFII 495
           STF ++ F+ T+ K   IF+I
Sbjct: 400 STFSDITFMRTVWKFFNIFLI 420


>AM292363-1|CAL23175.2|  347|Tribolium castaneum gustatory receptor
           candidate 42 protein.
          Length = 347

 Score = 21.0 bits (42), Expect = 9.4
 Identities = 8/16 (50%), Positives = 10/16 (62%)
 Frame = -2

Query: 549 FKCVIYCNFNQKHEDI 502
           F CVI C F  K+ +I
Sbjct: 161 FLCVIVCIFRGKYRNI 176


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 144,988
Number of Sequences: 336
Number of extensions: 2810
Number of successful extensions: 5
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 17906060
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)