Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= prgv0279
         (685 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

CR456934-1|CAG33215.1|  125|Homo sapiens PDCD5 protein.                58   2e-08
BT006694-1|AAP35340.1|  125|Homo sapiens programmed cell death 5...    58   2e-08
BC015519-1|AAH15519.1|  125|Homo sapiens programmed cell death 5...    58   2e-08
AF014955-1|AAD11579.1|  125|Homo sapiens TFAR19 protein.               58   2e-08
BC101073-1|AAI01074.1|  841|Homo sapiens SLIT and NTRK-like fami...    30   8.8  
BC101072-1|AAI01073.1|  841|Homo sapiens SLIT and NTRK-like fami...    30   8.8  
BC101071-1|AAI01072.1|  841|Homo sapiens SLIT and NTRK-like fami...    30   8.8  
BC101070-1|AAI01071.1|  841|Homo sapiens SLIT and NTRK-like fami...    30   8.8  
AK026427-1|BAB15480.1|  440|Homo sapiens protein ( Homo sapiens ...    30   8.8  

>CR456934-1|CAG33215.1|  125|Homo sapiens PDCD5 protein.
          Length = 125

 Score = 58.4 bits (135), Expect = 2e-08
 Identities = 28/63 (44%), Positives = 46/63 (73%)
 Frame = +2

Query: 260 RPEKAAMIENMICRMAQMGQIQCKITEPDLIQILESFNQQMPKSQSTVKFDRRRAALDSD 439
           +PEK   +EN + +MA+ GQ+  K++E  LI+IL+  +QQ  K+ +TVKF+RR+  +DSD
Sbjct: 63  KPEKTKAVENYLIQMARYGQLSEKVSEQGLIEILKKVSQQTKKT-TTVKFNRRK-VMDSD 120

Query: 440 DED 448
           ++D
Sbjct: 121 EDD 123


>BT006694-1|AAP35340.1|  125|Homo sapiens programmed cell death 5
           protein.
          Length = 125

 Score = 58.4 bits (135), Expect = 2e-08
 Identities = 28/63 (44%), Positives = 46/63 (73%)
 Frame = +2

Query: 260 RPEKAAMIENMICRMAQMGQIQCKITEPDLIQILESFNQQMPKSQSTVKFDRRRAALDSD 439
           +PEK   +EN + +MA+ GQ+  K++E  LI+IL+  +QQ  K+ +TVKF+RR+  +DSD
Sbjct: 63  KPEKTKAVENYLIQMARYGQLSEKVSEQGLIEILKKVSQQTEKT-TTVKFNRRK-VMDSD 120

Query: 440 DED 448
           ++D
Sbjct: 121 EDD 123


>BC015519-1|AAH15519.1|  125|Homo sapiens programmed cell death 5
           protein.
          Length = 125

 Score = 58.4 bits (135), Expect = 2e-08
 Identities = 28/63 (44%), Positives = 46/63 (73%)
 Frame = +2

Query: 260 RPEKAAMIENMICRMAQMGQIQCKITEPDLIQILESFNQQMPKSQSTVKFDRRRAALDSD 439
           +PEK   +EN + +MA+ GQ+  K++E  LI+IL+  +QQ  K+ +TVKF+RR+  +DSD
Sbjct: 63  KPEKTKAVENYLIQMARYGQLSEKVSEQGLIEILKKVSQQTEKT-TTVKFNRRK-VMDSD 120

Query: 440 DED 448
           ++D
Sbjct: 121 EDD 123


>AF014955-1|AAD11579.1|  125|Homo sapiens TFAR19 protein.
          Length = 125

 Score = 58.4 bits (135), Expect = 2e-08
 Identities = 28/63 (44%), Positives = 46/63 (73%)
 Frame = +2

Query: 260 RPEKAAMIENMICRMAQMGQIQCKITEPDLIQILESFNQQMPKSQSTVKFDRRRAALDSD 439
           +PEK   +EN + +MA+ GQ+  K++E  LI+IL+  +QQ  K+ +TVKF+RR+  +DSD
Sbjct: 63  KPEKTKAVENYLIQMARYGQLSEKVSEQGLIEILKKVSQQTEKT-TTVKFNRRK-VMDSD 120

Query: 440 DED 448
           ++D
Sbjct: 121 EDD 123


>BC101073-1|AAI01074.1|  841|Homo sapiens SLIT and NTRK-like family,
           member 6 protein.
          Length = 841

 Score = 29.9 bits (64), Expect = 8.8
 Identities = 13/28 (46%), Positives = 17/28 (60%)
 Frame = -1

Query: 334 YFTLNLTHLGHSTDHVFNHGSFLWSTHL 251
           YFTL + HLG++   V   GSF+  T L
Sbjct: 386 YFTLEMLHLGNNRIEVLEEGSFMNLTRL 413


>BC101072-1|AAI01073.1|  841|Homo sapiens SLIT and NTRK-like family,
           member 6 protein.
          Length = 841

 Score = 29.9 bits (64), Expect = 8.8
 Identities = 13/28 (46%), Positives = 17/28 (60%)
 Frame = -1

Query: 334 YFTLNLTHLGHSTDHVFNHGSFLWSTHL 251
           YFTL + HLG++   V   GSF+  T L
Sbjct: 386 YFTLEMLHLGNNRIEVLEEGSFMNLTRL 413


>BC101071-1|AAI01072.1|  841|Homo sapiens SLIT and NTRK-like family,
           member 6 protein.
          Length = 841

 Score = 29.9 bits (64), Expect = 8.8
 Identities = 13/28 (46%), Positives = 17/28 (60%)
 Frame = -1

Query: 334 YFTLNLTHLGHSTDHVFNHGSFLWSTHL 251
           YFTL + HLG++   V   GSF+  T L
Sbjct: 386 YFTLEMLHLGNNRIEVLEEGSFMNLTRL 413


>BC101070-1|AAI01071.1|  841|Homo sapiens SLIT and NTRK-like family,
           member 6 protein.
          Length = 841

 Score = 29.9 bits (64), Expect = 8.8
 Identities = 13/28 (46%), Positives = 17/28 (60%)
 Frame = -1

Query: 334 YFTLNLTHLGHSTDHVFNHGSFLWSTHL 251
           YFTL + HLG++   V   GSF+  T L
Sbjct: 386 YFTLEMLHLGNNRIEVLEEGSFMNLTRL 413


>AK026427-1|BAB15480.1|  440|Homo sapiens protein ( Homo sapiens
           cDNA: FLJ22774 fis, clone KAIA1575. ).
          Length = 440

 Score = 29.9 bits (64), Expect = 8.8
 Identities = 13/28 (46%), Positives = 17/28 (60%)
 Frame = -1

Query: 334 YFTLNLTHLGHSTDHVFNHGSFLWSTHL 251
           YFTL + HLG++   V   GSF+  T L
Sbjct: 343 YFTLEMLHLGNNRIEVLEEGSFMNLTRL 370


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 85,700,604
Number of Sequences: 237096
Number of extensions: 1508940
Number of successful extensions: 2443
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 2397
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2443
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 7783251346
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)