Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= prgv0276
(693 letters)
Database: tribolium
336 sequences; 122,585 total letters
Searching.......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept... 25 0.59
AM292324-1|CAL23136.1| 398|Tribolium castaneum gustatory recept... 25 0.59
AJ005422-1|CAA06528.1| 287|Tribolium castaneum caudal protein p... 23 2.4
EF127810-1|ABL67947.1| 311|Tribolium castaneum nicotinic acetyl... 23 3.1
EF127809-1|ABL67946.1| 311|Tribolium castaneum nicotinic acetyl... 23 3.1
EF127808-1|ABL67945.1| 311|Tribolium castaneum nicotinic acetyl... 23 3.1
EF127807-1|ABL67944.1| 311|Tribolium castaneum nicotinic acetyl... 23 3.1
EF127806-1|ABL67943.1| 311|Tribolium castaneum nicotinic acetyl... 23 3.1
AJ876407-1|CAI45288.1| 590|Tribolium castaneum phosphatase prot... 22 4.1
AM292362-1|CAL23174.2| 398|Tribolium castaneum gustatory recept... 22 5.5
AM292355-1|CAL23167.1| 324|Tribolium castaneum gustatory recept... 22 5.5
AM292380-1|CAL23192.2| 489|Tribolium castaneum gustatory recept... 21 9.6
AM292346-1|CAL23158.2| 314|Tribolium castaneum gustatory recept... 21 9.6
>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
candidate 46 protein.
Length = 1451
Score = 25.0 bits (52), Expect = 0.59
Identities = 15/38 (39%), Positives = 22/38 (57%), Gaps = 3/38 (7%)
Frame = -1
Query: 516 KTRPCGRVKVR-FFISLQLVCYLSIH--KTHQNFVELF 412
+ +P GR+ R FIS +CYL H K+ + F E+F
Sbjct: 207 RLKPEGRISNRRVFISFSKICYLHQHLSKSVKLFNEVF 244
>AM292324-1|CAL23136.1| 398|Tribolium castaneum gustatory receptor
candidate 3 protein.
Length = 398
Score = 25.0 bits (52), Expect = 0.59
Identities = 15/38 (39%), Positives = 22/38 (57%), Gaps = 3/38 (7%)
Frame = -1
Query: 516 KTRPCGRVKVR-FFISLQLVCYLSIH--KTHQNFVELF 412
+ +P GR+ R FIS +CYL H K+ + F E+F
Sbjct: 225 RLKPEGRISNRRVFISFSKICYLHQHLSKSVKLFNEVF 262
>AJ005422-1|CAA06528.1| 287|Tribolium castaneum caudal protein
protein.
Length = 287
Score = 23.0 bits (47), Expect = 2.4
Identities = 10/36 (27%), Positives = 19/36 (52%)
Frame = -3
Query: 400 KMSQRKRKQINIEDKSRIISKLESGISNKDLTKEYG 293
+ +RK+ + IE+KS+I + +G + T G
Sbjct: 209 RAKERKQNKKRIEEKSQIDNLFHNGFMQEQSTHHQG 244
>EF127810-1|ABL67947.1| 311|Tribolium castaneum nicotinic
acetylcholine receptor subunitalpha 6 transcript variant
5 protein.
Length = 311
Score = 22.6 bits (46), Expect = 3.1
Identities = 12/40 (30%), Positives = 20/40 (50%)
Frame = -1
Query: 681 LTNNFGELGLLERPAKLYCKPIE*VSHICLQWLLKSRKEN 562
L N G +LERP +P+E + LQ ++ ++N
Sbjct: 8 LNNLLGPYNVLERPVANESEPLEVKFGLTLQQIIDVDEKN 47
>EF127809-1|ABL67946.1| 311|Tribolium castaneum nicotinic
acetylcholine receptor subunitalpha 6 transcript variant
4 protein.
Length = 311
Score = 22.6 bits (46), Expect = 3.1
Identities = 12/40 (30%), Positives = 20/40 (50%)
Frame = -1
Query: 681 LTNNFGELGLLERPAKLYCKPIE*VSHICLQWLLKSRKEN 562
L N G +LERP +P+E + LQ ++ ++N
Sbjct: 8 LNNLLGPYNVLERPVANESEPLEVKFGLTLQQIIDVDEKN 47
>EF127808-1|ABL67945.1| 311|Tribolium castaneum nicotinic
acetylcholine receptor subunitalpha 6 transcript variant
3 protein.
Length = 311
Score = 22.6 bits (46), Expect = 3.1
Identities = 12/40 (30%), Positives = 20/40 (50%)
Frame = -1
Query: 681 LTNNFGELGLLERPAKLYCKPIE*VSHICLQWLLKSRKEN 562
L N G +LERP +P+E + LQ ++ ++N
Sbjct: 8 LNNLLGPYNVLERPVANESEPLEVKFGLTLQQIIDVDEKN 47
>EF127807-1|ABL67944.1| 311|Tribolium castaneum nicotinic
acetylcholine receptor subunitalpha 6 transcript variant
2 protein.
Length = 311
Score = 22.6 bits (46), Expect = 3.1
Identities = 12/40 (30%), Positives = 20/40 (50%)
Frame = -1
Query: 681 LTNNFGELGLLERPAKLYCKPIE*VSHICLQWLLKSRKEN 562
L N G +LERP +P+E + LQ ++ ++N
Sbjct: 8 LNNLLGPYNVLERPVANESEPLEVKFGLTLQQIIDVDEKN 47
>EF127806-1|ABL67943.1| 311|Tribolium castaneum nicotinic
acetylcholine receptor subunitalpha 6 transcript variant
1 protein.
Length = 311
Score = 22.6 bits (46), Expect = 3.1
Identities = 12/40 (30%), Positives = 20/40 (50%)
Frame = -1
Query: 681 LTNNFGELGLLERPAKLYCKPIE*VSHICLQWLLKSRKEN 562
L N G +LERP +P+E + LQ ++ ++N
Sbjct: 8 LNNLLGPYNVLERPVANESEPLEVKFGLTLQQIIDVDEKN 47
>AJ876407-1|CAI45288.1| 590|Tribolium castaneum phosphatase
protein.
Length = 590
Score = 22.2 bits (45), Expect = 4.1
Identities = 8/17 (47%), Positives = 13/17 (76%)
Frame = +1
Query: 262 SKWLKLSSVIHHIPLLS 312
SKW S++I ++PLL+
Sbjct: 417 SKWRVRSAIIEYMPLLA 433
>AM292362-1|CAL23174.2| 398|Tribolium castaneum gustatory receptor
candidate 41 protein.
Length = 398
Score = 21.8 bits (44), Expect = 5.5
Identities = 6/15 (40%), Positives = 12/15 (80%)
Frame = +1
Query: 64 IRTVKICYNCSYTVV 108
++ +++ Y CSYTV+
Sbjct: 172 VQAIEVLYICSYTVL 186
>AM292355-1|CAL23167.1| 324|Tribolium castaneum gustatory receptor
candidate 34 protein.
Length = 324
Score = 21.8 bits (44), Expect = 5.5
Identities = 8/15 (53%), Positives = 11/15 (73%)
Frame = +1
Query: 601 VGYLFNWFTIQLSRS 645
+ Y FN++TI SRS
Sbjct: 65 IAYFFNFWTILFSRS 79
>AM292380-1|CAL23192.2| 489|Tribolium castaneum gustatory receptor
candidate 59 protein.
Length = 489
Score = 21.0 bits (42), Expect = 9.6
Identities = 8/17 (47%), Positives = 11/17 (64%)
Frame = +2
Query: 347 NTRFVFNINLFSFSLRH 397
++ + NINLFS L H
Sbjct: 323 DSMLIRNINLFSLQLAH 339
>AM292346-1|CAL23158.2| 314|Tribolium castaneum gustatory receptor
candidate 25 protein.
Length = 314
Score = 21.0 bits (42), Expect = 9.6
Identities = 8/17 (47%), Positives = 11/17 (64%)
Frame = +2
Query: 347 NTRFVFNINLFSFSLRH 397
++ + NINLFS L H
Sbjct: 148 DSMLIRNINLFSLQLAH 164
Database: tribolium
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 122,585
Number of sequences in database: 336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 164,942
Number of Sequences: 336
Number of extensions: 3759
Number of successful extensions: 15
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18218375
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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