Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= prgv0275
(686 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q6XYE8 Cluster: Cytochrome c oxidase subunit I; n=2; En... 186 3e-46
UniRef50_Q8LX70 Cluster: Cytochrome c oxidase subunit I; n=4; Ch... 130 4e-29
UniRef50_Q6TP93 Cluster: Cytochrome c oxidase subunit I; n=2; Br... 123 5e-27
UniRef50_Q5GGF4 Cluster: Cytochrome c oxidase subunit I; n=2742;... 120 4e-26
UniRef50_P00395 Cluster: Cytochrome c oxidase subunit 1; n=44498... 119 8e-26
UniRef50_Q9MIY8 Cluster: Cytochrome c oxidase subunit 1; n=861; ... 114 2e-24
UniRef50_P29649 Cluster: Cytochrome c oxidase subunit 1; n=441; ... 114 2e-24
UniRef50_Q6ZLV6 Cluster: Cytochrome c oxidase subunit I; n=941; ... 113 3e-24
UniRef50_Q951H1 Cluster: Cytochrome c oxidase subunit I; n=388; ... 110 3e-23
UniRef50_A7UG06 Cluster: Cytochrome oxidase subunits 1 and 2 pol... 110 4e-23
UniRef50_Q85HI4 Cluster: Cytochrome c oxidase subunit I; n=7; Ec... 109 5e-23
UniRef50_P60620 Cluster: Cytochrome c oxidase subunit 1; n=2931;... 108 1e-22
UniRef50_P48866 Cluster: Cytochrome c oxidase subunit 1; n=179; ... 104 2e-21
UniRef50_Q1NET5 Cluster: Cytochrome-c oxidase; n=3; Alphaproteob... 103 3e-21
UniRef50_A2T435 Cluster: Cytochrome c oxidase subunit I; n=126; ... 102 7e-21
UniRef50_Q9MCX7 Cluster: Cytochrome c oxidase subunit I; n=181; ... 100 4e-20
UniRef50_Q1XA94 Cluster: Cytochrome c oxidase subunit I; n=825; ... 100 7e-20
UniRef50_Q0H8Y3 Cluster: Probable intron-encoded endonuclease aI... 100 7e-20
UniRef50_Q9ZZX1 Cluster: Intron-encoded DNA endonuclease aI5 alp... 99 9e-20
UniRef50_Q5W914 Cluster: Cytochrome c oxidase subunit I; n=9; Co... 98 2e-19
UniRef50_Q9G8S1 Cluster: Cytochrome c oxidase subunit 1; n=1; Na... 97 5e-19
UniRef50_Q7YEU6 Cluster: Endonuclease; n=4; Fungi/Metazoa group|... 97 5e-19
UniRef50_Q28SZ5 Cluster: Cytochrome-c oxidase; n=50; cellular or... 91 2e-17
UniRef50_Q02766 Cluster: Cytochrome c oxidase subunit 1; n=107; ... 91 2e-17
UniRef50_O47573 Cluster: Cytochrome c oxidase subunit I; n=42; N... 87 3e-16
UniRef50_Q6ED53 Cluster: Cox1-i5 protein; n=2; Candida stellata|... 85 1e-15
UniRef50_Q8LX74 Cluster: Cytochrome c oxidase subunit I; n=1; Ch... 85 2e-15
UniRef50_Q06473 Cluster: Cytochrome c oxidase subunit 1 (EC 1.9.... 82 1e-14
UniRef50_Q67ML1 Cluster: Cytochrome C oxidase subunit I; n=17; B... 82 1e-14
UniRef50_A3ZTG1 Cluster: Cytochrome c oxidase subunit I; n=1; Bl... 82 1e-14
UniRef50_Q9B8X8 Cluster: Cytochrome c oxidase subunit I; n=517; ... 82 1e-14
UniRef50_Q34463 Cluster: Cytochrome oxidase subunit I; n=3; Eugl... 81 2e-14
UniRef50_P24010 Cluster: Cytochrome c oxidase subunit 1 (EC 1.9.... 81 2e-14
UniRef50_Q8SHP5 Cluster: Cytochrome c oxidase subunit I; n=15; F... 77 3e-14
UniRef50_Q4XXN6 Cluster: Putative uncharacterized protein; n=1; ... 80 4e-14
UniRef50_P14544 Cluster: Cytochrome c oxidase subunit 1; n=7; Eu... 80 6e-14
UniRef50_A6C5X9 Cluster: Cytochrome caa3 oxidase; n=3; Bacteria|... 79 8e-14
UniRef50_Q36097 Cluster: Cytochrome c oxidase subunit 1; n=3; Th... 79 1e-13
UniRef50_Q11EK8 Cluster: Cytochrome c oxidase, subunit I; n=5; P... 79 1e-13
UniRef50_Q9TAP9 Cluster: Cytochrome c oxidase subunit I; n=2; To... 79 1e-13
UniRef50_A5UVJ0 Cluster: Cytochrome-c oxidase; n=2; Roseiflexus|... 77 3e-13
UniRef50_A1ZL77 Cluster: Alternative Cytochrome c oxidase polype... 77 3e-13
UniRef50_Q9XKD7 Cluster: Cytochrome c oxidase subunit I; n=1; Di... 77 4e-13
UniRef50_Q98P35 Cluster: Cytochrome C oxidase subunit I; n=16; c... 77 5e-13
UniRef50_Q1H1C1 Cluster: Cytochrome-c oxidase; n=1; Methylobacil... 77 5e-13
UniRef50_A7BSH8 Cluster: Cytochrome c oxidase aa3, subunit 1; n=... 77 5e-13
UniRef50_P98005 Cluster: Cytochrome c oxidase polypeptide I+III ... 76 9e-13
UniRef50_Q8ZXD1 Cluster: Cytochrome C oxidase subunit I /III; n=... 75 1e-12
UniRef50_A6C0L1 Cluster: Cytochrome c oxidase subunit I; n=1; Pl... 75 2e-12
UniRef50_O67935 Cluster: Cytochrome c oxidase subunit I; n=1; Aq... 74 3e-12
UniRef50_Q6RJT8 Cluster: Cytochrome c oxidase subunit 2; n=1; Ha... 74 4e-12
UniRef50_P34956 Cluster: Quinol oxidase subunit 1 (EC 1.10.3.-) ... 74 4e-12
UniRef50_Q6ED52 Cluster: Cox1-i4 protein; n=1; Candida stellata|... 73 7e-12
UniRef50_Q9WWR2 Cluster: Ubiquinol oxidase subunit 1 (EC 1.10.3.... 73 9e-12
UniRef50_Q9XLV8 Cluster: Cytochrome c oxidase subunit I; n=1; Di... 71 2e-11
UniRef50_Q18JR5 Cluster: Cytochrome-c-like terminal oxidase, sub... 71 3e-11
UniRef50_P33518 Cluster: Cytochrome c oxidase polypeptide 1; n=4... 71 4e-11
UniRef50_Q7NQZ0 Cluster: Cytochrome o ubiquinol oxidase, subunit... 70 6e-11
UniRef50_Q0AI64 Cluster: Cytochrome-c oxidase; n=3; Proteobacter... 69 1e-10
UniRef50_Q0I8U1 Cluster: Cytochrome c oxidase subunit I; n=16; B... 69 1e-10
UniRef50_A5FXH8 Cluster: Cytochrome-c oxidase; n=1; Acidiphilium... 69 1e-10
UniRef50_P39481 Cluster: Quinol oxidase subunit 1/3; n=5; Sulfol... 69 1e-10
UniRef50_A0VUI8 Cluster: Cytochrome-c oxidase; n=1; Dinoroseobac... 68 2e-10
UniRef50_Q79VD7 Cluster: Cytochrome c oxidase subunit 1; n=93; A... 68 2e-10
UniRef50_P98000 Cluster: Alternative cytochrome c oxidase subuni... 67 4e-10
UniRef50_Q9TCV5 Cluster: Cytochrome c oxidase subunit I; n=6; Di... 66 6e-10
UniRef50_A7H8L4 Cluster: Cytochrome c oxidase subunit I type; n=... 65 1e-09
UniRef50_Q9YDX6 Cluster: Heme-copper oxidase subunit I+III; n=1;... 65 1e-09
UniRef50_Q1CZF1 Cluster: Cytochrome c oxidase, subunit I; n=1; M... 65 2e-09
UniRef50_Q9MLW1 Cluster: Cytochrome c oxidase subunit I; n=5; Na... 65 2e-09
UniRef50_Q9RR77 Cluster: Cytochrome c oxidase, subunit I; n=2; D... 64 2e-09
UniRef50_A7HEB5 Cluster: Cytochrome-c oxidase; n=2; Cystobacteri... 64 2e-09
UniRef50_Q1IUK7 Cluster: Cytochrome-c oxidase; n=2; Acidobacteri... 64 4e-09
UniRef50_P11947 Cluster: Cytochrome c oxidase subunit 1; n=48; O... 64 4e-09
UniRef50_A4WT83 Cluster: Cytochrome c, monohaem; n=3; Rhodobacte... 63 5e-09
UniRef50_Q5P1W4 Cluster: Cytochrome c oxidase, subunit I; n=13; ... 62 9e-09
UniRef50_A0TRU9 Cluster: Cytochrome-c oxidase; n=30; Proteobacte... 62 2e-08
UniRef50_Q05FH1 Cluster: Cytochrome O ubiquinol oxidase subunit ... 61 3e-08
UniRef50_A3SJL2 Cluster: QoxA, Quinol oxidase subunit I; n=2; Rh... 61 3e-08
UniRef50_Q9Z605 Cluster: Quinol oxidase subunit I; n=15; Proteob... 58 2e-07
UniRef50_O86945 Cluster: Sub-unit I of an aa3-type cytochrome ox... 58 2e-07
UniRef50_Q5V018 Cluster: Cytochrome c oxidase subunit I; n=3; Ha... 57 4e-07
UniRef50_Q6KZG3 Cluster: Cytochrome c oxidase polypeptide I/III;... 55 1e-06
UniRef50_Q4FH11 Cluster: Cytochrome c oxidase subunit I; n=26; B... 50 4e-05
UniRef50_A0RZ19 Cluster: Heme/copper-type cytochrome/quinol oxid... 50 4e-05
UniRef50_Q9MFX8 Cluster: Cytochrome oxidase I; n=5; Echinometra ... 46 9e-04
UniRef50_Q8LX68 Cluster: Cytochrome oxidase I; n=2; Chaoborus|Re... 45 0.002
UniRef50_Q8LX82 Cluster: Cytochrome c oxidase subunit I; n=3; Ch... 42 0.011
UniRef50_Q30DC3 Cluster: Cytochrome c oxidase subunit I; n=30; P... 42 0.011
UniRef50_O67937 Cluster: Cytochrome c oxidase subunit I; n=1; Aq... 42 0.019
UniRef50_Q5VI63 Cluster: SoxB; n=3; Sulfolobaceae|Rep: SoxB - Ac... 41 0.033
UniRef50_Q9YBH5 Cluster: Cytochrome c oxidase (Ba3-type) subunit... 40 0.075
UniRef50_A3H8Y4 Cluster: Cytochrome-c oxidase precursor; n=1; Ca... 39 0.099
UniRef50_Q8SK39 Cluster: Cytochrome c oxidase subunit I; n=455; ... 38 0.23
UniRef50_Q8ZXC1 Cluster: Cytochrome C oxidase subunit I; n=3; Py... 38 0.30
UniRef50_Q396U4 Cluster: Cytochrome c oxidase, subunit I; n=18; ... 36 0.70
UniRef50_Q2W549 Cluster: Heme/copper-type cytochrome/quinol oxid... 36 0.70
UniRef50_Q28SZ6 Cluster: Cytochrome c oxidase subunit I; n=1; Ja... 36 0.70
UniRef50_Q981A5 Cluster: Heme bearing subunit I of the terminal ... 36 0.70
UniRef50_Q3INR3 Cluster: Cytochrome-c-like terminal oxidase, sub... 36 0.70
UniRef50_P98004 Cluster: Quinol oxidase subunit 1 (EC 1.10.3.-) ... 36 0.93
UniRef50_Q604Y9 Cluster: Cytochrome c oxidase, subunit I; n=1; M... 36 1.2
UniRef50_Q2VQT0 Cluster: Heme-copper oxygen reductase; n=1; Rhod... 36 1.2
UniRef50_Q9TCU2 Cluster: Cytochrome c oxidase subunit I; n=1; Ta... 36 1.2
UniRef50_A2T428 Cluster: Putative uncharacterized protein ORF820... 36 1.2
UniRef50_Q2Y5N3 Cluster: Integral membrane proteins containing u... 35 2.1
UniRef50_A5URU0 Cluster: Cytochrome c oxidase, subunit I; n=4; C... 35 2.1
UniRef50_A7D123 Cluster: Cytochrome-c oxidase; n=1; Halorubrum l... 35 2.1
UniRef50_Q9KEW0 Cluster: Cytochrome c oxidase subunit I; n=8; Ba... 34 2.8
UniRef50_Q6RCN4 Cluster: Cytochrome c oxidase subunit I; n=1; Bu... 34 2.8
UniRef50_A6EJR8 Cluster: Transcriptional regulator, AraC family ... 33 4.9
UniRef50_O07289 Cluster: Subunit I-homologue of cytochrome oxida... 33 6.5
UniRef50_Q5CTJ9 Cluster: Cation-transporting ATPase; n=2; Crypto... 33 8.6
UniRef50_Q56408 Cluster: Cytochrome c oxidase subunit 1 (EC 1.9.... 33 8.6
>UniRef50_Q6XYE8 Cluster: Cytochrome c oxidase subunit I; n=2;
Endopterygota|Rep: Cytochrome c oxidase subunit I -
Copitarsia incommoda
Length = 150
Score = 186 bits (454), Expect = 3e-46
Identities = 88/128 (68%), Positives = 95/128 (74%)
Frame = +3
Query: 12 FISTFILIFWTS*SLYFNFTRIWYNFSYYFTRKRKKRNFWLFRNNLCYTSNWVIRIYCLS 191
F+STFILIFWT SLYFNFT IWYNFSYYF K KK N W+F +NLCY SNW+I IYCLS
Sbjct: 23 FMSTFILIFWTPSSLYFNFTSIWYNFSYYFPSKSKKGNLWVFSDNLCYISNWIISIYCLS 82
Query: 192 SSYIHCXXXXXXXXXXXXXXXXIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFT 371
SSYI+ IAVPTGIKIF LAT HGTQINY+P+IL LGFVFLFT
Sbjct: 83 SSYIYSSNSYWYSTYFTSATMIIAVPTGIKIFSWLATFHGTQINYSPSILWSLGFVFLFT 142
Query: 372 VGGLTGVI 395
VGGLTGVI
Sbjct: 143 VGGLTGVI 150
>UniRef50_Q8LX70 Cluster: Cytochrome c oxidase subunit I; n=4;
Chaoborus|Rep: Cytochrome c oxidase subunit I -
Chaoborus crystallinus (Phantom midge) (Tipula
crystallina)
Length = 207
Score = 130 bits (313), Expect = 4e-29
Identities = 60/71 (84%), Positives = 66/71 (92%)
Frame = +3
Query: 258 IAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFTVGGLTGVILANSSIDITLHDTY 437
IAVPTGIKIF LAT+HGTQINY+P++L LGFVFLFTVGGLTGV+LANSS+DI LHDTY
Sbjct: 16 IAVPTGIKIFSWLATLHGTQINYSPSLLWALGFVFLFTVGGLTGVVLANSSLDIVLHDTY 75
Query: 438 YVVAHFHYVLS 470
YVVAHFHYVLS
Sbjct: 76 YVVAHFHYVLS 86
>UniRef50_Q6TP93 Cluster: Cytochrome c oxidase subunit I; n=2;
Bruchidius|Rep: Cytochrome c oxidase subunit I -
Bruchidius aff. varius GLK-2003
Length = 339
Score = 123 bits (296), Expect = 5e-27
Identities = 59/71 (83%), Positives = 62/71 (87%)
Frame = +3
Query: 258 IAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFTVGGLTGVILANSSIDITLHDTY 437
IAVPTGIK+F LAT HGTQI Y+P L LGFVFLFTVGGLTGV+LANSSIDI LHDTY
Sbjct: 225 IAVPTGIKVFSWLATFHGTQILYSPVTLWTLGFVFLFTVGGLTGVVLANSSIDIVLHDTY 284
Query: 438 YVVAHFHYVLS 470
YVVAHFHYVLS
Sbjct: 285 YVVAHFHYVLS 295
Score = 94.3 bits (224), Expect = 2e-18
Identities = 45/78 (57%), Positives = 54/78 (69%)
Frame = +1
Query: 49 EVYILILPGFGIISHIISQERGKKETFXXXXXXXXXXXXXXXXFIV*AHHIFTVGIDIDT 228
EVYILILPGFG+ISHIISQE GKKE F F+V AHH+FTVG+D+DT
Sbjct: 155 EVYILILPGFGMISHIISQESGKKEAFGTLGMIYAMMAIGLLGFVVWAHHMFTVGMDVDT 214
Query: 229 RAYFTSATILLLYQQELK 282
RAYFTSAT+++ +K
Sbjct: 215 RAYFTSATMIIAVPTGIK 232
Score = 51.2 bits (117), Expect = 2e-05
Identities = 22/35 (62%), Positives = 29/35 (82%)
Frame = +2
Query: 497 GIY**YPLFTGLSLNSYILKIQFFTIFIGVNITFF 601
GI +PLFTG++LN++ LKIQF +FIGVN+TFF
Sbjct: 305 GIVQWFPLFTGVTLNNFFLKIQFIIMFIGVNLTFF 339
>UniRef50_Q5GGF4 Cluster: Cytochrome c oxidase subunit I; n=2742;
Bilateria|Rep: Cytochrome c oxidase subunit I - Cotesia
melitaearum (Parasitoid wasp)
Length = 499
Score = 120 bits (288), Expect = 4e-26
Identities = 59/109 (54%), Positives = 72/109 (66%)
Frame = +1
Query: 10 ILYQHLF*FFGHPEVYILILPGFGIISHIISQERGKKETFXXXXXXXXXXXXXXXXFIV* 189
ILYQHLF FFGHPEVYILILPGFGIISH+I E GKKETF FIV
Sbjct: 213 ILYQHLFWFFGHPEVYILILPGFGIISHMIFNESGKKETFGMLGMIYAMLTIGFLGFIVW 272
Query: 190 AHHIFTVGIDIDTRAYFTSATILLLYQQELKFLDD*LQYMELKLIITLI 336
AHH+FT+G+D+DTRAYFTSAT+++ +K + +KL+ L+
Sbjct: 273 AHHMFTIGMDVDTRAYFTSATMIIAIPTGIKIFSWMATFSGVKLMNNLM 321
Score = 105 bits (252), Expect = 1e-21
Identities = 48/71 (67%), Positives = 58/71 (81%)
Frame = +3
Query: 258 IAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFTVGGLTGVILANSSIDITLHDTY 437
IA+PTGIKIF +AT G ++ N IL +GF+FLFTVGGLTGV+L+NSS+D+ LHDTY
Sbjct: 296 IAIPTGIKIFSWMATFSGVKLMNNLMILWTMGFIFLFTVGGLTGVVLSNSSVDVVLHDTY 355
Query: 438 YVVAHFHYVLS 470
Y VAHFHYVLS
Sbjct: 356 YGVAHFHYVLS 366
Score = 55.2 bits (127), Expect = 1e-06
Identities = 27/57 (47%), Positives = 35/57 (61%)
Frame = +2
Query: 512 YPLFTGLSLNSYILKIQFFTIFIGVNITFFPQHFFRV*PGYLDDISGYPRLIYFHGN 682
+P+F GL +N Y LKI F+ FIGVN+ FFPQHF + G S YP + Y + N
Sbjct: 381 FPMFFGLMMNEYFLKIHFYLTFIGVNLIFFPQHFLGL-SGMPRRYSDYPDM-YLNWN 435
>UniRef50_P00395 Cluster: Cytochrome c oxidase subunit 1; n=44498;
root|Rep: Cytochrome c oxidase subunit 1 - Homo sapiens
(Human)
Length = 513
Score = 119 bits (286), Expect = 8e-26
Identities = 63/143 (44%), Positives = 84/143 (58%)
Frame = +3
Query: 258 IAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFTVGGLTGVILANSSIDITLHDTY 437
IA+PTG+K+F LAT+HG+ + ++ +L LGF+FLFTVGGLTG++LANSS+DI LHDTY
Sbjct: 312 IAIPTGVKVFSWLATLHGSNMKWSAAVLWALGFIFLFTVGGLTGIVLANSSLDIVLHDTY 371
Query: 438 YVVAHFHYVLSXXXXXXXXXXXXNDILYLQAFH*ILIY*KFNFLQYLLE*I*HFFHNIFL 617
YVVAHFHYVLS + + Y K +F + FF FL
Sbjct: 372 YVVAHFHYVLSMGAVFAIMGGFIHWFPLFSGYTLDQTYAKIHFTIMFIGVNLTFFPQHFL 431
Query: 618 GFSRDTSTIFPDIPDSYISMEII 686
G S + D PD+Y + I+
Sbjct: 432 GLS-GMPRRYSDYPDAYTTWNIL 453
Score = 113 bits (273), Expect = 3e-24
Identities = 53/84 (63%), Positives = 62/84 (73%)
Frame = +1
Query: 10 ILYQHLF*FFGHPEVYILILPGFGIISHIISQERGKKETFXXXXXXXXXXXXXXXXFIV* 189
ILYQHLF FFGHPEVYILILPGFG+ISHI++ GKKE F FIV
Sbjct: 229 ILYQHLFWFFGHPEVYILILPGFGMISHIVTYYSGKKEPFGYMGMVWAMMSIGFLGFIVW 288
Query: 190 AHHIFTVGIDIDTRAYFTSATILL 261
AHH+FTVG+D+DTRAYFTSAT+++
Sbjct: 289 AHHMFTVGMDVDTRAYFTSATMII 312
>UniRef50_Q9MIY8 Cluster: Cytochrome c oxidase subunit 1; n=861;
root|Rep: Cytochrome c oxidase subunit 1 - Danio rerio
(Zebrafish) (Brachydanio rerio)
Length = 516
Score = 114 bits (275), Expect = 2e-24
Identities = 53/84 (63%), Positives = 62/84 (73%)
Frame = +1
Query: 10 ILYQHLF*FFGHPEVYILILPGFGIISHIISQERGKKETFXXXXXXXXXXXXXXXXFIV* 189
ILYQHLF FFGHPEVYILILPGFGIISH+++ GKKE F FIV
Sbjct: 229 ILYQHLFWFFGHPEVYILILPGFGIISHVVAYYAGKKEPFGYMGMVWAMMAIGLLGFIVW 288
Query: 190 AHHIFTVGIDIDTRAYFTSATILL 261
AHH+FTVG+D+DTRAYFTSAT+++
Sbjct: 289 AHHMFTVGMDVDTRAYFTSATMII 312
Score = 113 bits (271), Expect = 5e-24
Identities = 50/71 (70%), Positives = 60/71 (84%)
Frame = +3
Query: 258 IAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFTVGGLTGVILANSSIDITLHDTY 437
IA+PTG+K+F LAT+HG I + +L LGF+FLFTVGGLTG++LANSS+DI LHDTY
Sbjct: 312 IAIPTGVKVFSWLATLHGGAIKWETPMLWALGFIFLFTVGGLTGIVLANSSLDIVLHDTY 371
Query: 438 YVVAHFHYVLS 470
YVVAHFHYVLS
Sbjct: 372 YVVAHFHYVLS 382
Score = 54.4 bits (125), Expect = 2e-06
Identities = 27/49 (55%), Positives = 32/49 (65%)
Frame = +2
Query: 512 YPLFTGLSLNSYILKIQFFTIFIGVNITFFPQHFFRV*PGYLDDISGYP 658
+PLFTG +LNS KI F +FIGVN+TFFPQHF + G S YP
Sbjct: 397 FPLFTGYTLNSVWTKIHFGVMFIGVNLTFFPQHFLGL-AGMPRRYSDYP 444
>UniRef50_P29649 Cluster: Cytochrome c oxidase subunit 1; n=441;
Bilateria|Rep: Cytochrome c oxidase subunit 1 - Pantodon
buchholtzi (Butterflyfish)
Length = 184
Score = 114 bits (274), Expect = 2e-24
Identities = 51/71 (71%), Positives = 61/71 (85%)
Frame = +3
Query: 258 IAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFTVGGLTGVILANSSIDITLHDTY 437
IA+PTG+K+F LAT+HG I ++ +L LGF+FLFTVGGLTG+ILANSS+DI LHDTY
Sbjct: 77 IAIPTGVKVFSWLATLHGGSIKWDTPMLWALGFIFLFTVGGLTGIILANSSLDIVLHDTY 136
Query: 438 YVVAHFHYVLS 470
YVVAHFHYVLS
Sbjct: 137 YVVAHFHYVLS 147
Score = 100 bits (239), Expect = 4e-20
Identities = 46/76 (60%), Positives = 55/76 (72%)
Frame = +1
Query: 34 FFGHPEVYILILPGFGIISHIISQERGKKETFXXXXXXXXXXXXXXXXFIV*AHHIFTVG 213
FFGHPEVYILILPGFG+ISHI++ GKKE F FIV AHH+FTVG
Sbjct: 2 FFGHPEVYILILPGFGMISHIVAYYSGKKEPFGYMGMVWAMMAIGLLGFIVWAHHMFTVG 61
Query: 214 IDIDTRAYFTSATILL 261
+D+DTRAYFTSAT+++
Sbjct: 62 MDVDTRAYFTSATMII 77
>UniRef50_Q6ZLV6 Cluster: Cytochrome c oxidase subunit I; n=941;
Eukaryota|Rep: Cytochrome c oxidase subunit I -
Ophisurus macrorhynchos
Length = 546
Score = 113 bits (273), Expect = 3e-24
Identities = 51/71 (71%), Positives = 60/71 (84%)
Frame = +3
Query: 258 IAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFTVGGLTGVILANSSIDITLHDTY 437
IA+PTG+K+F LAT+HG I + +L LGF+FLFTVGGLTG++LANSSIDI LHDTY
Sbjct: 312 IAIPTGVKVFSWLATLHGGAIKWETPMLWALGFIFLFTVGGLTGIVLANSSIDIVLHDTY 371
Query: 438 YVVAHFHYVLS 470
YVVAHFHYVLS
Sbjct: 372 YVVAHFHYVLS 382
Score = 113 bits (272), Expect = 4e-24
Identities = 52/84 (61%), Positives = 62/84 (73%)
Frame = +1
Query: 10 ILYQHLF*FFGHPEVYILILPGFGIISHIISQERGKKETFXXXXXXXXXXXXXXXXFIV* 189
ILYQHLF FFGHPEVYILILPGFG+ISH+++ GKKE F FIV
Sbjct: 229 ILYQHLFWFFGHPEVYILILPGFGMISHVVTYYAGKKEPFGYMGMVWAMMAIGLLGFIVW 288
Query: 190 AHHIFTVGIDIDTRAYFTSATILL 261
AHH+FTVG+D+DTRAYFTSAT+++
Sbjct: 289 AHHMFTVGMDVDTRAYFTSATMII 312
Score = 50.4 bits (115), Expect = 4e-05
Identities = 25/49 (51%), Positives = 31/49 (63%)
Frame = +2
Query: 512 YPLFTGLSLNSYILKIQFFTIFIGVNITFFPQHFFRV*PGYLDDISGYP 658
+PLFTG +L+ KI F +FIGVN+TFFPQHF + G S YP
Sbjct: 397 FPLFTGYTLHDTWTKIHFGVMFIGVNLTFFPQHFLGL-AGMPRRYSDYP 444
>UniRef50_Q951H1 Cluster: Cytochrome c oxidase subunit I; n=388;
Coelomata|Rep: Cytochrome c oxidase subunit I - Picoides
borealis
Length = 513
Score = 110 bits (265), Expect = 3e-23
Identities = 51/71 (71%), Positives = 59/71 (83%)
Frame = +3
Query: 258 IAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFTVGGLTGVILANSSIDITLHDTY 437
IA+PTGIK F LAT G I ++P +L LGF+FLFTVGGLTG++LANSS+DI LHDTY
Sbjct: 313 IAIPTGIKAFSWLATXXGGTIKWDPPMLWALGFIFLFTVGGLTGIVLANSSLDIALHDTY 372
Query: 438 YVVAHFHYVLS 470
YVVAHFHYVLS
Sbjct: 373 YVVAHFHYVLS 383
Score = 48.8 bits (111), Expect = 1e-04
Identities = 24/49 (48%), Positives = 30/49 (61%)
Frame = +2
Query: 512 YPLFTGLSLNSYILKIQFFTIFIGVNITFFPQHFFRV*PGYLDDISGYP 658
+PLFTG +LN+ K F +F GVN+TFFPQHF + G S YP
Sbjct: 398 FPLFTGYTLNNAWAKAHFGVMFTGVNLTFFPQHFLGL-AGMPRRYSDYP 445
>UniRef50_A7UG06 Cluster: Cytochrome oxidase subunits 1 and 2
polyprotein; n=1; Phaeosphaeria nodorum SN15|Rep:
Cytochrome oxidase subunits 1 and 2 polyprotein -
Phaeosphaeria nodorum SN15
Length = 789
Score = 110 bits (264), Expect = 4e-23
Identities = 64/143 (44%), Positives = 81/143 (56%)
Frame = +3
Query: 258 IAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFTVGGLTGVILANSSIDITLHDTY 437
IAVPTGIKIF LAT +G +++ P++L LGFVF+FT+GGL+GV+LAN+S+DI HDTY
Sbjct: 312 IAVPTGIKIFSWLATCYGGSLHFIPSLLFALGFVFMFTIGGLSGVVLANASLDIAFHDTY 371
Query: 438 YVVAHFHYVLSXXXXXXXXXXXXNDILYLQAFH*ILIY*KFNFLQYLLE*I*HFFHNIFL 617
YVVAHFHYVLS I + L+Y K +F FF FL
Sbjct: 372 YVVAHFHYVLSMGAVFALFSGWYFWIPKILGLDYNLLYSKAHFWVLFTGVNLTFFPQHFL 431
Query: 618 GFSRDTSTIFPDIPDSYISMEII 686
G I D PD++ I
Sbjct: 432 GLQGMPRRI-SDYPDAFTGWNFI 453
Score = 97.9 bits (233), Expect = 2e-19
Identities = 47/91 (51%), Positives = 59/91 (64%)
Frame = +1
Query: 10 ILYQHLF*FFGHPEVYILILPGFGIISHIISQERGKKETFXXXXXXXXXXXXXXXXFIV* 189
ILYQHLF FFGHPEVYILI+PGFGIIS IS K F F+V
Sbjct: 230 ILYQHLFWFFGHPEVYILIIPGFGIISTTIS-ANSNKSVFGYLGMVYAMCSIGILGFVVW 288
Query: 190 AHHIFTVGIDIDTRAYFTSATILLLYQQELK 282
+HH++TVG+D+DTRAYFT+AT+++ +K
Sbjct: 289 SHHMYTVGLDVDTRAYFTAATLIIAVPTGIK 319
>UniRef50_Q85HI4 Cluster: Cytochrome c oxidase subunit I; n=7;
Echinoida|Rep: Cytochrome c oxidase subunit I -
Echinometra oblonga
Length = 386
Score = 109 bits (263), Expect = 5e-23
Identities = 50/91 (54%), Positives = 64/91 (70%)
Frame = +1
Query: 10 ILYQHLF*FFGHPEVYILILPGFGIISHIISQERGKKETFXXXXXXXXXXXXXXXXFIV* 189
IL+QHLF FFGHPEVYILILPGFG+ISH+I+ GK+E F F+V
Sbjct: 206 ILFQHLFXFFGHPEVYILILPGFGMISHVIAHYSGKREPFGYLGMVYAMIAIGVLGFLVW 265
Query: 190 AHHIFTVGIDIDTRAYFTSATILLLYQQELK 282
AHH+FTVG+D+DTRAYFT+AT+++ +K
Sbjct: 266 AHHMFTVGMDVDTRAYFTAATMIIAVPTGIK 296
Score = 109 bits (261), Expect = 8e-23
Identities = 48/71 (67%), Positives = 59/71 (83%)
Frame = +3
Query: 258 IAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFTVGGLTGVILANSSIDITLHDTY 437
IAVPTGIK+F +AT+ G+ + + + LGFVFLFT+GGLTG++LANSSID+ LHDTY
Sbjct: 289 IAVPTGIKVFSWMATLQGSNLQWETPLFWALGFVFLFTLGGLTGIVLANSSIDVVLHDTY 348
Query: 438 YVVAHFHYVLS 470
YVVAHFHYVLS
Sbjct: 349 YVVAHFHYVLS 359
>UniRef50_P60620 Cluster: Cytochrome c oxidase subunit 1; n=2931;
cellular organisms|Rep: Cytochrome c oxidase subunit 1 -
Arabidopsis thaliana (Mouse-ear cress)
Length = 527
Score = 108 bits (259), Expect = 1e-22
Identities = 49/71 (69%), Positives = 58/71 (81%)
Frame = +3
Query: 258 IAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFTVGGLTGVILANSSIDITLHDTY 437
IAVPTGIKIF +AT+ G I Y +L +GF+FLFT+GGLTG++LANS +DI LHDTY
Sbjct: 314 IAVPTGIKIFSWIATMWGGSIQYKTPMLFAVGFIFLFTIGGLTGIVLANSGLDIALHDTY 373
Query: 438 YVVAHFHYVLS 470
YVVAHFHYVLS
Sbjct: 374 YVVAHFHYVLS 384
Score = 106 bits (254), Expect = 6e-22
Identities = 52/91 (57%), Positives = 62/91 (68%)
Frame = +1
Query: 10 ILYQHLF*FFGHPEVYILILPGFGIISHIISQERGKKETFXXXXXXXXXXXXXXXXFIV* 189
ILYQHLF FFGHPEVYILILPGFGIISHI+S G K F F+V
Sbjct: 232 ILYQHLFWFFGHPEVYILILPGFGIISHIVSTFSG-KPVFGYLGMVYAMISIGVLGFLVW 290
Query: 190 AHHIFTVGIDIDTRAYFTSATILLLYQQELK 282
AHH+FTVG+D+DTRAYFT+AT+++ +K
Sbjct: 291 AHHMFTVGLDVDTRAYFTAATMIIAVPTGIK 321
Score = 35.1 bits (77), Expect = 1.6
Identities = 21/50 (42%), Positives = 27/50 (54%), Gaps = 6/50 (12%)
Frame = +2
Query: 554 KIQFFTIFIGVNITFFPQHFF------RV*PGYLDDISGYPRLIYFHGNY 685
+I F+ F GVN+TFFP HF R P Y D +G+ L F G+Y
Sbjct: 413 QIHFWITFFGVNLTFFPMHFLGLSGMPRRIPDYPDAYAGWNALSSF-GSY 461
>UniRef50_P48866 Cluster: Cytochrome c oxidase subunit 1; n=179;
cellular organisms|Rep: Cytochrome c oxidase subunit 1 -
Chondrus crispus (Carragheen)
Length = 532
Score = 104 bits (249), Expect = 2e-21
Identities = 48/71 (67%), Positives = 58/71 (81%)
Frame = +3
Query: 258 IAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFTVGGLTGVILANSSIDITLHDTY 437
IAVPTGIKIF +ATI I+ +L +GF+FLFT+GGLTG++LANS +DI+LHDTY
Sbjct: 319 IAVPTGIKIFSWIATIWEGSIHLKTPMLFAIGFIFLFTIGGLTGIVLANSGLDISLHDTY 378
Query: 438 YVVAHFHYVLS 470
YVVAHFHYVLS
Sbjct: 379 YVVAHFHYVLS 389
Score = 103 bits (247), Expect = 4e-21
Identities = 50/91 (54%), Positives = 62/91 (68%)
Frame = +1
Query: 10 ILYQHLF*FFGHPEVYILILPGFGIISHIISQERGKKETFXXXXXXXXXXXXXXXXFIV* 189
ILYQHLF FFGHPEVYILILPGFG+ISHI+S +K F FIV
Sbjct: 237 ILYQHLFWFFGHPEVYILILPGFGMISHIVS-TFSRKPVFGYIGMVYAMVSIGVLGFIVW 295
Query: 190 AHHIFTVGIDIDTRAYFTSATILLLYQQELK 282
AHH++TVG+D+DTRAYFT+AT+++ +K
Sbjct: 296 AHHMYTVGLDVDTRAYFTAATMIIAVPTGIK 326
Score = 41.1 bits (92), Expect = 0.025
Identities = 26/69 (37%), Positives = 36/69 (52%), Gaps = 6/69 (8%)
Frame = +2
Query: 497 GIY**YPLFTGLSLNSYILKIQFFTIFIGVNITFFPQHFF------RV*PGYLDDISGYP 658
G Y + TGL + +I F++ FIGVN+TF P HF R P Y D +G+
Sbjct: 399 GFYYWFGKITGLQYPETLGQIHFWSTFIGVNLTFMPMHFLGLAGMPRRIPDYPDAYAGW- 457
Query: 659 RLIYFHGNY 685
LI +G+Y
Sbjct: 458 NLIASYGSY 466
>UniRef50_Q1NET5 Cluster: Cytochrome-c oxidase; n=3;
Alphaproteobacteria|Rep: Cytochrome-c oxidase -
Sphingomonas sp. SKA58
Length = 556
Score = 103 bits (248), Expect = 3e-21
Identities = 48/71 (67%), Positives = 57/71 (80%)
Frame = +3
Query: 258 IAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFTVGGLTGVILANSSIDITLHDTY 437
IAVPTGIKIF +ATI G I++ ++ LGF+FLFTVGG+TGV+LAN +D LHDTY
Sbjct: 354 IAVPTGIKIFSWIATIWGGSISFKTPMVWALGFIFLFTVGGVTGVVLANGGVDDVLHDTY 413
Query: 438 YVVAHFHYVLS 470
YVVAHFHYVLS
Sbjct: 414 YVVAHFHYVLS 424
Score = 87.8 bits (208), Expect = 2e-16
Identities = 42/90 (46%), Positives = 56/90 (62%)
Frame = +1
Query: 13 LYQHLF*FFGHPEVYILILPGFGIISHIISQERGKKETFXXXXXXXXXXXXXXXXFIV*A 192
LYQHLF FFGHPEVYI+ILPGFGIIS I+S +K F F+V A
Sbjct: 273 LYQHLFWFFGHPEVYIMILPGFGIISQIVS-TFSRKPVFGYLGMAYAMVAIGVVGFVVWA 331
Query: 193 HHIFTVGIDIDTRAYFTSATILLLYQQELK 282
HH+FT G+ ++ + YFT+AT+++ +K
Sbjct: 332 HHMFTTGMSVNVKMYFTAATMVIAVPTGIK 361
Score = 39.5 bits (88), Expect = 0.075
Identities = 15/39 (38%), Positives = 23/39 (58%)
Frame = +2
Query: 497 GIY**YPLFTGLSLNSYILKIQFFTIFIGVNITFFPQHF 613
G Y +P +G N ++ ++ F+ F GVN+ FFP HF
Sbjct: 434 GFYYWFPKMSGKMYNEFLGQLHFWVFFAGVNLLFFPMHF 472
>UniRef50_A2T435 Cluster: Cytochrome c oxidase subunit I; n=126;
Fungi/Metazoa group|Rep: Cytochrome c oxidase subunit I
- Placozoan sp. BZ2423
Length = 498
Score = 102 bits (245), Expect = 7e-21
Identities = 49/73 (67%), Positives = 59/73 (80%), Gaps = 2/73 (2%)
Frame = +3
Query: 258 IAVPTGIKIFR*LATIHGTQIN--YNPNIL*RLGFVFLFTVGGLTGVILANSSIDITLHD 431
IAVPTGIKIF LAT+ G+ N + + LGF+FLFT+GGLTG++L+NSS+DI LHD
Sbjct: 277 IAVPTGIKIFSWLATVSGSGRNLIFTTPMAWALGFIFLFTIGGLTGIVLSNSSLDILLHD 336
Query: 432 TYYVVAHFHYVLS 470
TYYVVAHFHYVLS
Sbjct: 337 TYYVVAHFHYVLS 349
Score = 44.0 bits (99), Expect = 0.003
Identities = 18/35 (51%), Positives = 27/35 (77%)
Frame = +1
Query: 178 FIV*AHHIFTVGIDIDTRAYFTSATILLLYQQELK 282
FIV A H++ VG+D+DTRAYFT+AT+++ +K
Sbjct: 250 FIVWADHMYVVGMDVDTRAYFTAATMIIAVPTGIK 284
Score = 39.9 bits (89), Expect = 0.057
Identities = 18/41 (43%), Positives = 24/41 (58%)
Frame = +2
Query: 491 YWGIY**YPLFTGLSLNSYILKIQFFTIFIGVNITFFPQHF 613
+ G Y + TG + I F+ +F+GVNITFFPQHF
Sbjct: 357 FGGFYLWFGKITGYAYKDIYGLIHFWLMFLGVNITFFPQHF 397
>UniRef50_Q9MCX7 Cluster: Cytochrome c oxidase subunit I; n=181;
Coelomata|Rep: Cytochrome c oxidase subunit I - Piculus
rubiginosus
Length = 504
Score = 100 bits (239), Expect = 4e-20
Identities = 44/59 (74%), Positives = 52/59 (88%)
Frame = +3
Query: 294 LATIHGTQINYNPNIL*RLGFVFLFTVGGLTGVILANSSIDITLHDTYYVVAHFHYVLS 470
LAT+HG I ++P +L LGF+FLFTVGGLTG++LANSS+DI LHDTYYVVAHFHYVLS
Sbjct: 325 LATLHGGTIKWDPPMLWALGFIFLFTVGGLTGIVLANSSLDIALHDTYYVVAHFHYVLS 383
Score = 72.5 bits (170), Expect = 9e-12
Identities = 31/40 (77%), Positives = 35/40 (87%)
Frame = +1
Query: 10 ILYQHLF*FFGHPEVYILILPGFGIISHIISQERGKKETF 129
ILYQHLF FFGHPEVYILILPGFG+ISH+++ GKKE F
Sbjct: 230 ILYQHLFWFFGHPEVYILILPGFGMISHVVTYYAGKKEPF 269
Score = 50.0 bits (114), Expect = 5e-05
Identities = 25/49 (51%), Positives = 30/49 (61%)
Frame = +2
Query: 512 YPLFTGLSLNSYILKIQFFTIFIGVNITFFPQHFFRV*PGYLDDISGYP 658
+PLFTG +LNS K F +F GVN+TFFPQHF + G S YP
Sbjct: 398 FPLFTGYTLNSAWAKAHFGVMFTGVNLTFFPQHFLGL-AGMPRRYSDYP 445
>UniRef50_Q1XA94 Cluster: Cytochrome c oxidase subunit I; n=825;
Eukaryota|Rep: Cytochrome c oxidase subunit I -
Paracoccidioides brasiliensis
Length = 710
Score = 99.5 bits (237), Expect = 7e-20
Identities = 47/84 (55%), Positives = 58/84 (69%)
Frame = +1
Query: 10 ILYQHLF*FFGHPEVYILILPGFGIISHIISQERGKKETFXXXXXXXXXXXXXXXXFIV* 189
ILYQHLF FFGHPEVYILI+PGFGIIS +IS K F FIV
Sbjct: 256 ILYQHLFWFFGHPEVYILIIPGFGIISTVIS-ANSNKNVFGYLGMVYAMMSIGLLGFIVW 314
Query: 190 AHHIFTVGIDIDTRAYFTSATILL 261
+HH++TVG+D+DTRAYFT+AT+++
Sbjct: 315 SHHMYTVGLDVDTRAYFTAATLII 338
Score = 98.7 bits (235), Expect = 1e-19
Identities = 44/71 (61%), Positives = 57/71 (80%)
Frame = +3
Query: 258 IAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFTVGGLTGVILANSSIDITLHDTY 437
IA+PTG+KIF LAT +G +++ +L LGFV +FT+GGL+GV+LAN+S +I HDTY
Sbjct: 338 IAIPTGVKIFSWLATCYGGSLHFTTPMLFALGFVVMFTIGGLSGVVLANASENIAFHDTY 397
Query: 438 YVVAHFHYVLS 470
YVVAHFHYVLS
Sbjct: 398 YVVAHFHYVLS 408
Score = 48.0 bits (109), Expect = 2e-04
Identities = 26/54 (48%), Positives = 32/54 (59%)
Frame = +2
Query: 497 GIY**YPLFTGLSLNSYILKIQFFTIFIGVNITFFPQHFFRV*PGYLDDISGYP 658
G Y P GLS ++ KI F+ +FIGVN+TFFPQHF + G IS YP
Sbjct: 418 GWYFWIPKIIGLSYDTKASKIHFWILFIGVNLTFFPQHFLGL-QGMPRRISDYP 470
>UniRef50_Q0H8Y3 Cluster: Probable intron-encoded endonuclease aI8
precursor [Contains: Truncated non-functional cytochrome
oxidase 1; Intron-encoded endonuclease aI8 (EC
3.1.-.-)]; n=103; Eukaryota|Rep: Probable intron-encoded
endonuclease aI8 precursor [Contains: Truncated
non-functional cytochrome oxidase 1; Intron-encoded
endonuclease aI8 (EC 3.1.-.-)] - Ustilago maydis (Smut
fungus)
Length = 645
Score = 99.5 bits (237), Expect = 7e-20
Identities = 46/91 (50%), Positives = 61/91 (67%)
Frame = +1
Query: 10 ILYQHLF*FFGHPEVYILILPGFGIISHIISQERGKKETFXXXXXXXXXXXXXXXXFIV* 189
ILYQHLF FFGHPEVYILI+PGFG++SHI+S G K F F+V
Sbjct: 229 ILYQHLFWFFGHPEVYILIIPGFGMVSHIVSAFSG-KPVFGYLGMVYAMFSIGILGFLVW 287
Query: 190 AHHIFTVGIDIDTRAYFTSATILLLYQQELK 282
+HH++ VG+D+DTRAYFT+AT+++ +K
Sbjct: 288 SHHMYAVGLDVDTRAYFTAATMIIAVPTGIK 318
Score = 78.6 bits (185), Expect = 1e-13
Identities = 37/61 (60%), Positives = 46/61 (75%)
Frame = +3
Query: 258 IAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFTVGGLTGVILANSSIDITLHDTY 437
IAVPTGIKIF LAT++G + +L LGF+ LFT+GGLTGVILAN+S+D+ LHD
Sbjct: 311 IAVPTGIKIFSWLATLYGGSLRITTPMLFALGFIALFTIGGLTGVILANASLDVALHDLK 370
Query: 438 Y 440
Y
Sbjct: 371 Y 371
>UniRef50_Q9ZZX1 Cluster: Intron-encoded DNA endonuclease aI5 alpha
precursor (DNA endonuclease I-SceIV) [Contains:
Truncated non-functional cytochrome oxidase 1; DNA
endonuclease aI5 alpha (EC 3.1.-.-) (Intron-encoded
endonuclease I- SceIV)]; n=2; Saccharomycetales|Rep:
Intron-encoded DNA endonuclease aI5 alpha precursor (DNA
endonuclease I-SceIV) [Contains: Truncated
non-functional cytochrome oxidase 1; DNA endonuclease
aI5 alpha (EC 3.1.-.-) (Intron-encoded endonuclease I-
SceIV)] - Saccharomyces cerevisiae (Baker's yeast)
Length = 630
Score = 99.1 bits (236), Expect = 9e-20
Identities = 47/91 (51%), Positives = 60/91 (65%)
Frame = +1
Query: 10 ILYQHLF*FFGHPEVYILILPGFGIISHIISQERGKKETFXXXXXXXXXXXXXXXXFIV* 189
ILY+HLF FFGHPEVYILI+PGFGIISH++S KK F F+V
Sbjct: 230 ILYEHLFWFFGHPEVYILIIPGFGIISHVVS-TYSKKPVFGEISMVYAMASIGLLGFLVW 288
Query: 190 AHHIFTVGIDIDTRAYFTSATILLLYQQELK 282
+HH++ VG+D DTRAYFTSAT+++ +K
Sbjct: 289 SHHMYIVGLDADTRAYFTSATMIIAIPTGIK 319
>UniRef50_Q5W914 Cluster: Cytochrome c oxidase subunit I; n=9;
Coelomata|Rep: Cytochrome c oxidase subunit I - Lingula
unguis
Length = 573
Score = 97.9 bits (233), Expect = 2e-19
Identities = 44/84 (52%), Positives = 55/84 (65%)
Frame = +1
Query: 10 ILYQHLF*FFGHPEVYILILPGFGIISHIISQERGKKETFXXXXXXXXXXXXXXXXFIV* 189
IL+QHLF FFGHPEVYILILP FG+ISHI+ + K F F+V
Sbjct: 232 ILWQHLFWFFGHPEVYILILPAFGVISHILCRSSAKLHVFGKIGMSWASMGIAWMGFLVW 291
Query: 190 AHHIFTVGIDIDTRAYFTSATILL 261
HH+F G+DIDTRAYFT+AT+++
Sbjct: 292 GHHMFVAGLDIDTRAYFTAATLMI 315
Score = 90.2 bits (214), Expect = 4e-17
Identities = 44/74 (59%), Positives = 55/74 (74%), Gaps = 3/74 (4%)
Frame = +3
Query: 258 IAVPTGIKIFR*LATIHGTQINY---NPNIL*RLGFVFLFTVGGLTGVILANSSIDITLH 428
IAVPTG+K+F LATI G + +P+ +G V LFT+GGLTGVILAN+++ LH
Sbjct: 315 IAVPTGVKVFNWLATIFGGVYSLKHSHPSTFWAIGVVLLFTIGGLTGVILANAALSTLLH 374
Query: 429 DTYYVVAHFHYVLS 470
D+YYVVAHFHYVLS
Sbjct: 375 DSYYVVAHFHYVLS 388
Score = 36.3 bits (80), Expect = 0.70
Identities = 15/41 (36%), Positives = 23/41 (56%)
Frame = +2
Query: 491 YWGIY**YPLFTGLSLNSYILKIQFFTIFIGVNITFFPQHF 613
+ G + +P +TG+ ++ F FIGVN TFFP H+
Sbjct: 396 FGGFWFWFPFWTGMVPRKDLVLTHFMLTFIGVNFTFFPMHW 436
>UniRef50_Q9G8S1 Cluster: Cytochrome c oxidase subunit 1; n=1;
Naegleria gruberi|Rep: Cytochrome c oxidase subunit 1 -
Naegleria gruberi
Length = 633
Score = 96.7 bits (230), Expect = 5e-19
Identities = 47/91 (51%), Positives = 59/91 (64%)
Frame = +1
Query: 10 ILYQHLF*FFGHPEVYILILPGFGIISHIISQERGKKETFXXXXXXXXXXXXXXXXFIV* 189
+LYQHLF FFGHPEVYILILPGFG++SHII+ KK F FIV
Sbjct: 233 VLYQHLFWFFGHPEVYILILPGFGLVSHIIA-TFSKKRVFGHVPMIAAMLMIGLIGFIVW 291
Query: 190 AHHIFTVGIDIDTRAYFTSATILLLYQQELK 282
AHH++T GID T+AYFT+AT+++ +K
Sbjct: 292 AHHMYTSGIDTSTKAYFTAATMVIAIPTGIK 322
Score = 89.4 bits (212), Expect = 7e-17
Identities = 42/72 (58%), Positives = 54/72 (75%), Gaps = 1/72 (1%)
Frame = +3
Query: 258 IAVPTGIKIFR*LATIHGTQI-NYNPNIL*RLGFVFLFTVGGLTGVILANSSIDITLHDT 434
IA+PTGIK+F +AT+ G I Y P GFV LFT+GG+TG+IL+N+ ID ++HDT
Sbjct: 315 IAIPTGIKVFNWIATMWGGSIWMYTPMYF-AAGFVVLFTIGGITGIILSNAGIDTSIHDT 373
Query: 435 YYVVAHFHYVLS 470
+YVV HFHYVLS
Sbjct: 374 HYVVGHFHYVLS 385
Score = 43.6 bits (98), Expect = 0.005
Identities = 24/62 (38%), Positives = 31/62 (50%)
Frame = +2
Query: 491 YWGIY**YPLFTGLSLNSYILKIQFFTIFIGVNITFFPQHFFRV*PGYLDDISGYPRLIY 670
Y G Y + TGLS + + + F+ FIGVN TFFP HF G I YP +
Sbjct: 393 YGGFYYWWGKMTGLSYSESLGQAHFWMTFIGVNFTFFPMHFLGS-GGMPRRIPDYPDMYQ 451
Query: 671 FH 676
+H
Sbjct: 452 YH 453
>UniRef50_Q7YEU6 Cluster: Endonuclease; n=4; Fungi/Metazoa
group|Rep: Endonuclease - Saccharomyces servazzii
(Yeast)
Length = 675
Score = 96.7 bits (230), Expect = 5e-19
Identities = 46/91 (50%), Positives = 58/91 (63%)
Frame = +1
Query: 10 ILYQHLF*FFGHPEVYILILPGFGIISHIISQERGKKETFXXXXXXXXXXXXXXXXFIV* 189
I YQH F FFGHPEVYILI+PGFGI+SHI+S KK F F+V
Sbjct: 230 IFYQHAFWFFGHPEVYILIIPGFGIVSHIVS-TYSKKPVFGEISMVYAMASIGLLGFLVW 288
Query: 190 AHHIFTVGIDIDTRAYFTSATILLLYQQELK 282
+HH++ VG+D DTRAYFTSAT+++ +K
Sbjct: 289 SHHMYIVGLDADTRAYFTSATMIIAIPTGIK 319
Score = 73.7 bits (173), Expect = 4e-12
Identities = 34/58 (58%), Positives = 44/58 (75%)
Frame = +3
Query: 258 IAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFTVGGLTGVILANSSIDITLHD 431
IA+PTGIKIF LATI+G I ++ + F+FLFTVGGLTGV+LAN+S+D+ HD
Sbjct: 312 IAIPTGIKIFSWLATIYGGSIRLAVPMMFAIAFLFLFTVGGLTGVVLANASLDVAFHD 369
>UniRef50_Q28SZ5 Cluster: Cytochrome-c oxidase; n=50; cellular
organisms|Rep: Cytochrome-c oxidase - Jannaschia sp.
(strain CCS1)
Length = 628
Score = 91.5 bits (217), Expect = 2e-17
Identities = 41/71 (57%), Positives = 54/71 (76%)
Frame = +3
Query: 258 IAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFTVGGLTGVILANSSIDITLHDTY 437
IAVPTGIKIF +AT+ I++ ++ LGF+FLFT+GG TG+IL+ + +D HDTY
Sbjct: 417 IAVPTGIKIFSWIATMWMGSISFKTPMMFALGFIFLFTLGGTTGIILSQAGVDRAYHDTY 476
Query: 438 YVVAHFHYVLS 470
YVVAHFHYV+S
Sbjct: 477 YVVAHFHYVMS 487
Score = 83.0 bits (196), Expect = 6e-15
Identities = 40/91 (43%), Positives = 56/91 (61%)
Frame = +1
Query: 10 ILYQHLF*FFGHPEVYILILPGFGIISHIISQERGKKETFXXXXXXXXXXXXXXXXFIV* 189
IL+QH+F FFGHPEVYI+ILP FG+ISHI++ KK F F+V
Sbjct: 335 ILFQHIFWFFGHPEVYIVILPAFGVISHIVA-TFSKKPIFGYLPMVYALVAIGGLGFVVW 393
Query: 190 AHHIFTVGIDIDTRAYFTSATILLLYQQELK 282
AHH++TVG+ + +AYF AT+++ +K
Sbjct: 394 AHHMYTVGMTLTQQAYFMVATMVIAVPTGIK 424
Score = 36.3 bits (80), Expect = 0.70
Identities = 13/20 (65%), Positives = 16/20 (80%)
Frame = +2
Query: 554 KIQFFTIFIGVNITFFPQHF 613
++ F+ FIG NITFFPQHF
Sbjct: 516 QVHFWVFFIGTNITFFPQHF 535
>UniRef50_Q02766 Cluster: Cytochrome c oxidase subunit 1; n=107;
Alveolata|Rep: Cytochrome c oxidase subunit 1 -
Plasmodium falciparum
Length = 476
Score = 91.5 bits (217), Expect = 2e-17
Identities = 44/84 (52%), Positives = 54/84 (64%)
Frame = +1
Query: 10 ILYQHLF*FFGHPEVYILILPGFGIISHIISQERGKKETFXXXXXXXXXXXXXXXXFIV* 189
ILYQHLF FFGHPEVYILILP FG+ISH+IS + F +V
Sbjct: 235 ILYQHLFWFFGHPEVYILILPAFGVISHVISTNY-CRNLFGNQSMILAMGCIAVLGSLVW 293
Query: 190 AHHIFTVGIDIDTRAYFTSATILL 261
HH++T G+++DTRAYFTS TIL+
Sbjct: 294 VHHMYTTGLEVDTRAYFTSTTILI 317
Score = 77.4 bits (182), Expect = 3e-13
Identities = 36/72 (50%), Positives = 49/72 (68%), Gaps = 1/72 (1%)
Frame = +3
Query: 258 IAVPTGIKIFR*LATIHGTQINY-NPNIL*RLGFVFLFTVGGLTGVILANSSIDITLHDT 434
I++PTG K+F + T + + + L L F+ FT GG TGVIL N++ID+ LHDT
Sbjct: 317 ISIPTGTKVFNWICTYMSSNFGMIHSSSLLSLLFICTFTFGGTTGVILGNAAIDVALHDT 376
Query: 435 YYVVAHFHYVLS 470
YYV+AHFH+VLS
Sbjct: 377 YYVIAHFHFVLS 388
>UniRef50_O47573 Cluster: Cytochrome c oxidase subunit I; n=42;
Nematoda|Rep: Cytochrome c oxidase subunit I -
Onchocerca volvulus
Length = 548
Score = 87.4 bits (207), Expect = 3e-16
Identities = 40/71 (56%), Positives = 50/71 (70%)
Frame = +3
Query: 258 IAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFTVGGLTGVILANSSIDITLHDTY 437
IA+P+ +KIF L T G+ P F+FLFTVGGL+G+IL+ +S+DI LHDTY
Sbjct: 322 IAIPSAVKIFNWLGTFFGSNQKMQPLWCWTYSFIFLFTVGGLSGIILSAASLDIILHDTY 381
Query: 438 YVVAHFHYVLS 470
YVVAHFHY LS
Sbjct: 382 YVVAHFHYTLS 392
Score = 82.2 bits (194), Expect = 1e-14
Identities = 39/94 (41%), Positives = 53/94 (56%)
Frame = +1
Query: 10 ILYQHLF*FFGHPEVYILILPGFGIISHIISQERGKKETFXXXXXXXXXXXXXXXXFIV* 189
+LYQHLF FFGHPEVY++ILP FGIIS + K F V
Sbjct: 239 LLYQHLFWFFGHPEVYVIILPVFGIISEAVLFLTDKDRLFGQTSMTFASIWIAVLGTSVW 298
Query: 190 AHHIFTVGIDIDTRAYFTSATILLLYQQELKFLD 291
HH++T G+DIDTR YF++AT+++ +K +
Sbjct: 299 GHHMYTAGLDIDTRTYFSAATMIIAIPSAVKIFN 332
Score = 37.5 bits (83), Expect = 0.30
Identities = 14/33 (42%), Positives = 20/33 (60%)
Frame = +2
Query: 515 PLFTGLSLNSYILKIQFFTIFIGVNITFFPQHF 613
P G+S +S ++ F F+G N+TFFP HF
Sbjct: 408 PYMYGISFDSVMMMAVFVCFFVGTNMTFFPMHF 440
>UniRef50_Q6ED53 Cluster: Cox1-i5 protein; n=2; Candida
stellata|Rep: Cox1-i5 protein - Candida stellata (Yeast)
Length = 763
Score = 85.4 bits (202), Expect = 1e-15
Identities = 39/84 (46%), Positives = 55/84 (65%)
Frame = +1
Query: 10 ILYQHLF*FFGHPEVYILILPGFGIISHIISQERGKKETFXXXXXXXXXXXXXXXXFIV* 189
+LY+H+F FFGHPEVYILI+P FG++S I+ Q KK F F V
Sbjct: 247 LLYEHIFWFFGHPEVYILIVPVFGVVSQIV-QVYAKKPIFGKIGMIYAMASIGFLGFCVW 305
Query: 190 AHHIFTVGIDIDTRAYFTSATILL 261
+HH+FTVG+D D+RAYF+ A++++
Sbjct: 306 SHHMFTVGLDADSRAYFSGASLII 329
Score = 85.0 bits (201), Expect = 2e-15
Identities = 38/64 (59%), Positives = 50/64 (78%)
Frame = +3
Query: 258 IAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFTVGGLTGVILANSSIDITLHDTY 437
IA+PTG KIF LATI+G + + +L +GF+ LFT+GG+TGV++ANSS+DI HDTY
Sbjct: 329 IAIPTGSKIFSWLATIYGGTLRWTTPLLYAVGFIVLFTIGGVTGVVIANSSLDIMFHDTY 388
Query: 438 YVVA 449
YVVA
Sbjct: 389 YVVA 392
>UniRef50_Q8LX74 Cluster: Cytochrome c oxidase subunit I; n=1;
Chaoborus punctipennis|Rep: Cytochrome c oxidase subunit
I - Chaoborus punctipennis
Length = 205
Score = 85.0 bits (201), Expect = 2e-15
Identities = 56/124 (45%), Positives = 70/124 (56%), Gaps = 4/124 (3%)
Frame = +3
Query: 258 IAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFTVGGLTGVILANSSIDITLH--D 431
IAVPTGIKIF LAT+HGTQINY P++L LGFVFLFTVGG +N S+ I +
Sbjct: 15 IAVPTGIKIFSWLATLHGTQINYTPSLLWALGFVFLFTVGGPN---WSNFSLFINWYCSS 71
Query: 432 TYYVVAHFHYVLSXXXXXXXXXXXXN--DILYLQAFH*ILIY*KFNFLQYLLE*I*HFFH 605
Y+++ +++ + D YLQ F + KFN Y LE I HF H
Sbjct: 72 RYHIMLLLIFIMFFQLGLYLLLYQDSFIDTHYLQDFLLMQNDLKFNLQLYFLELILHFSH 131
Query: 606 NIFL 617
NIFL
Sbjct: 132 NIFL 135
>UniRef50_Q06473 Cluster: Cytochrome c oxidase subunit 1 (EC
1.9.3.1) (Cytochrome c oxidase polypeptide I)
(Cytochrome aa3 subunit 1) (Oxidase aa(3) subunit 1);
n=59; Cyanobacteria|Rep: Cytochrome c oxidase subunit 1
(EC 1.9.3.1) (Cytochrome c oxidase polypeptide I)
(Cytochrome aa3 subunit 1) (Oxidase aa(3) subunit 1) -
Synechocystis sp. (strain PCC 6803)
Length = 551
Score = 82.2 bits (194), Expect = 1e-14
Identities = 39/70 (55%), Positives = 49/70 (70%)
Frame = +3
Query: 258 IAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFTVGGLTGVILANSSIDITLHDTY 437
IAVPTGIKIF T+ G +I N +L GF+ F +GGLTGV++A+ DI +HDTY
Sbjct: 322 IAVPTGIKIFSWCGTLWGGKIQLNSAMLFAFGFLSSFMIGGLTGVMVASVPFDIHVHDTY 381
Query: 438 YVVAHFHYVL 467
+VV HFHYVL
Sbjct: 382 FVVGHFHYVL 391
Score = 63.7 bits (148), Expect = 4e-09
Identities = 34/91 (37%), Positives = 47/91 (51%)
Frame = +1
Query: 10 ILYQHLF*FFGHPEVYILILPGFGIISHIISQERGKKETFXXXXXXXXXXXXXXXXFIV* 189
++YQHLF F+ HP VYI+ILP FG+IS +I +K F IV
Sbjct: 240 VVYQHLFWFYSHPAVYIMILPFFGVISEVI-PVHARKPIFGYRAIAYSSLAISFLGLIVW 298
Query: 190 AHHIFTVGIDIDTRAYFTSATILLLYQQELK 282
AHH+FT G R +F + T+L+ +K
Sbjct: 299 AHHMFTSGTPGWLRMFFMATTMLIAVPTGIK 329
Score = 38.3 bits (85), Expect = 0.17
Identities = 15/38 (39%), Positives = 23/38 (60%)
Frame = +2
Query: 497 GIY**YPLFTGLSLNSYILKIQFFTIFIGVNITFFPQH 610
G+Y +P TG +N + ++ F FIG+N+TF P H
Sbjct: 402 GVYHWFPKMTGRMVNEPLGRLHFILTFIGMNLTFMPMH 439
>UniRef50_Q67ML1 Cluster: Cytochrome C oxidase subunit I; n=17;
Bacteria|Rep: Cytochrome C oxidase subunit I -
Symbiobacterium thermophilum
Length = 628
Score = 81.8 bits (193), Expect = 1e-14
Identities = 38/70 (54%), Positives = 50/70 (71%)
Frame = +3
Query: 258 IAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFTVGGLTGVILANSSIDITLHDTY 437
IAVPTG+KIF L+T+ G QI + +L +GF+ FT+GGL+G + A + D HDTY
Sbjct: 331 IAVPTGVKIFNWLSTMWGGQIRFTAAMLFAIGFIASFTIGGLSGFMHAAAPSDAQQHDTY 390
Query: 438 YVVAHFHYVL 467
+VVAHFHYVL
Sbjct: 391 FVVAHFHYVL 400
Score = 64.1 bits (149), Expect = 3e-09
Identities = 35/94 (37%), Positives = 47/94 (50%)
Frame = +1
Query: 10 ILYQHLF*FFGHPEVYILILPGFGIISHIISQERGKKETFXXXXXXXXXXXXXXXXFIV* 189
+ YQHLF FGHPEVYILILP GIIS +I +K F F V
Sbjct: 249 VFYQHLFWTFGHPEVYILILPAMGIISEVI-PVHARKMLFGYSVMVFSTALIGFMGFTVW 307
Query: 190 AHHIFTVGIDIDTRAYFTSATILLLYQQELKFLD 291
+HH+FTVG+ + F+ T+ + +K +
Sbjct: 308 SHHMFTVGMGPVVNSIFSLTTMAIAVPTGVKIFN 341
>UniRef50_A3ZTG1 Cluster: Cytochrome c oxidase subunit I; n=1;
Blastopirellula marina DSM 3645|Rep: Cytochrome c
oxidase subunit I - Blastopirellula marina DSM 3645
Length = 595
Score = 81.8 bits (193), Expect = 1e-14
Identities = 32/70 (45%), Positives = 51/70 (72%)
Frame = +3
Query: 258 IAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFTVGGLTGVILANSSIDITLHDTY 437
IA+P+ +K F L T++G ++ + +L L FV +F +GGL+G+ +A + +DI +HDTY
Sbjct: 360 IALPSAVKTFNWLGTVYGGKVQFTTPMLFALSFVSMFVIGGLSGIFMAATPVDIVIHDTY 419
Query: 438 YVVAHFHYVL 467
++VAHFHYVL
Sbjct: 420 FIVAHFHYVL 429
Score = 55.6 bits (128), Expect = 1e-06
Identities = 30/91 (32%), Positives = 46/91 (50%)
Frame = +1
Query: 10 ILYQHLF*FFGHPEVYILILPGFGIISHIISQERGKKETFXXXXXXXXXXXXXXXXFIV* 189
+L+QHLF F+ HP VYI+ILP G++S I++ +K F FIV
Sbjct: 278 LLWQHLFWFYSHPAVYIMILPAMGMVSDILAC-FSRKPIFGYKPMVYSICGIAGLGFIVW 336
Query: 190 AHHIFTVGIDIDTRAYFTSATILLLYQQELK 282
HH+F G++ F AT+++ +K
Sbjct: 337 GHHMFVSGMNPGLGMTFMVATMMIALPSAVK 367
>UniRef50_Q9B8X8 Cluster: Cytochrome c oxidase subunit I; n=517;
Bilateria|Rep: Cytochrome c oxidase subunit I -
Schistosoma mansoni (Blood fluke)
Length = 609
Score = 81.8 bits (193), Expect = 1e-14
Identities = 39/72 (54%), Positives = 53/72 (73%), Gaps = 1/72 (1%)
Frame = +3
Query: 258 IAVPTGIKIFR*LATIHGTQINY-NPNIL*RLGFVFLFTVGGLTGVILANSSIDITLHDT 434
I VPTGIK+F L ++ + +P + +GF+FLFTVGG+TGV L+ S++DI HDT
Sbjct: 402 IGVPTGIKVFSWLYMLNSCGMRVLDPIVWWLVGFIFLFTVGGVTGVALSASALDILFHDT 461
Query: 435 YYVVAHFHYVLS 470
++VVAHFHYVLS
Sbjct: 462 WFVVAHFHYVLS 473
Score = 78.6 bits (185), Expect = 1e-13
Identities = 37/84 (44%), Positives = 48/84 (57%)
Frame = +1
Query: 10 ILYQHLF*FFGHPEVYILILPGFGIISHIISQERGKKETFXXXXXXXXXXXXXXXXFIV* 189
IL+QHLF FFGHPEVY+LILPGFGI+SHI +F +V
Sbjct: 319 ILFQHLFWFFGHPEVYVLILPGFGIVSHICMSLSNNDSSFGYYGLICAMASIVCLGSVVW 378
Query: 190 AHHIFTVGIDIDTRAYFTSATILL 261
HH+F VG D T +F+S T+++
Sbjct: 379 GHHMFMVGFDSLTGVFFSSITMII 402
Score = 37.1 bits (82), Expect = 0.40
Identities = 13/37 (35%), Positives = 21/37 (56%)
Frame = +2
Query: 512 YPLFTGLSLNSYILKIQFFTIFIGVNITFFPQHFFRV 622
+P G SLN Y+L+ + +G N+ FFP H+ +
Sbjct: 488 WPFIVGYSLNKYLLQGHWLLSMVGFNLCFFPMHYLGI 524
>UniRef50_Q34463 Cluster: Cytochrome oxidase subunit I; n=3; Euglena
gracilis|Rep: Cytochrome oxidase subunit I - Euglena
gracilis
Length = 495
Score = 81.4 bits (192), Expect = 2e-14
Identities = 40/91 (43%), Positives = 56/91 (61%)
Frame = +1
Query: 10 ILYQHLF*FFGHPEVYILILPGFGIISHIISQERGKKETFXXXXXXXXXXXXXXXXFIV* 189
+LYQHLF FFGHPEVY++ILP FG+ S I++ K+ F + V
Sbjct: 239 VLYQHLFWFFGHPEVYVIILPVFGLTSLILTSII-HKDIFGREGMMYCIISIGVVGYFVW 297
Query: 190 AHHIFTVGIDIDTRAYFTSATILLLYQQELK 282
AHH+FTVG+DID+R+YF+ AT ++ +K
Sbjct: 298 AHHMFTVGLDIDSRSYFSIATSIISIPTSVK 328
Score = 62.9 bits (146), Expect = 7e-09
Identities = 31/72 (43%), Positives = 44/72 (61%), Gaps = 1/72 (1%)
Frame = +3
Query: 258 IAVPTGIKIFR*LAT-IHGTQINYNPNIL*RLGFVFLFTVGGLTGVILANSSIDITLHDT 434
I++PT +K+F + T G N + F+ F GG TG++L++ S+DI LHDT
Sbjct: 321 ISIPTSVKMFSYINTWASGRGFRGNNSSWSFFSFLICFCFGGFTGLLLSSGSLDIMLHDT 380
Query: 435 YYVVAHFHYVLS 470
Y+VV HFH VLS
Sbjct: 381 YFVVGHFHTVLS 392
>UniRef50_P24010 Cluster: Cytochrome c oxidase subunit 1 (EC
1.9.3.1) (Cytochrome c oxidase polypeptide I)
(Cytochrome aa3 subunit 1) (Caa-3605 subunit 1) (Oxidase
aa(3) subunit 1); n=13; Bacillaceae|Rep: Cytochrome c
oxidase subunit 1 (EC 1.9.3.1) (Cytochrome c oxidase
polypeptide I) (Cytochrome aa3 subunit 1) (Caa-3605
subunit 1) (Oxidase aa(3) subunit 1) - Bacillus subtilis
Length = 622
Score = 81.4 bits (192), Expect = 2e-14
Identities = 37/70 (52%), Positives = 49/70 (70%)
Frame = +3
Query: 258 IAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFTVGGLTGVILANSSIDITLHDTY 437
IA+PTGIKIF L TI G + Y +L + F+ F +GG+TGV+LA ++ D HDTY
Sbjct: 320 IAIPTGIKIFNWLLTIWGGNVKYTTAMLYAVSFIPSFVLGGVTGVMLAAAAADYQFHDTY 379
Query: 438 YVVAHFHYVL 467
+VVAHFHYV+
Sbjct: 380 FVVAHFHYVI 389
Score = 64.9 bits (151), Expect = 2e-09
Identities = 34/94 (36%), Positives = 47/94 (50%)
Frame = +1
Query: 10 ILYQHLF*FFGHPEVYILILPGFGIISHIISQERGKKETFXXXXXXXXXXXXXXXXFIV* 189
++++HLF FGHPEVYILILP FGI S +I +K F F+V
Sbjct: 238 VIWEHLFWIFGHPEVYILILPAFGIFSEVI-PVFARKRLFGYSSMVFAIVLIGFLGFMVW 296
Query: 190 AHHIFTVGIDIDTRAYFTSATILLLYQQELKFLD 291
HH+FT G+ A F AT+ + +K +
Sbjct: 297 VHHMFTTGLGPIANAIFAVATMAIAIPTGIKIFN 330
Score = 33.9 bits (74), Expect = 3.7
Identities = 16/39 (41%), Positives = 23/39 (58%)
Frame = +2
Query: 497 GIY**YPLFTGLSLNSYILKIQFFTIFIGVNITFFPQHF 613
G++ +P G L+ + KI F FIG ++TFF QHF
Sbjct: 400 GVHFWWPKMFGKILHETMGKISFVLFFIGFHLTFFIQHF 438
>UniRef50_Q8SHP5 Cluster: Cytochrome c oxidase subunit I; n=15;
Fungi/Metazoa group|Rep: Cytochrome c oxidase subunit I
- Trichoderma reesei (Hypocrea jecorina)
Length = 635
Score = 77.4 bits (182), Expect(2) = 3e-14
Identities = 44/78 (56%), Positives = 51/78 (65%), Gaps = 14/78 (17%)
Frame = +3
Query: 258 IAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFTVGGL--------------TGVI 395
IAVPTGIKIF LAT +G I P +L LGFVFLFT+GGL +GV+
Sbjct: 371 IAVPTGIKIFSWLATCYGGSIKMTPVMLFSLGFVFLFTIGGLLNHLLWKINKFRFVSGVV 430
Query: 396 LANSSIDITLHDTYYVVA 449
LAN+S+DI HDTYYVVA
Sbjct: 431 LANASLDIAFHDTYYVVA 448
Score = 60.1 bits (139), Expect = 5e-08
Identities = 27/36 (75%), Positives = 29/36 (80%)
Frame = +1
Query: 10 ILYQHLF*FFGHPEVYILILPGFGIISHIISQERGK 117
IL+QHLF FFGHPEVYILI+PGFGIIS IS K
Sbjct: 255 ILFQHLFWFFGHPEVYILIIPGFGIISTTISSSSNK 290
Score = 44.8 bits (101), Expect = 0.002
Identities = 16/30 (53%), Positives = 25/30 (83%)
Frame = +1
Query: 193 HHIFTVGIDIDTRAYFTSATILLLYQQELK 282
HH++TVG+D+DTRAYFT+AT+++ +K
Sbjct: 349 HHMYTVGLDVDTRAYFTAATLIIAVPTGIK 378
Score = 44.8 bits (101), Expect = 0.002
Identities = 22/48 (45%), Positives = 29/48 (60%)
Frame = +2
Query: 515 PLFTGLSLNSYILKIQFFTIFIGVNITFFPQHFFRV*PGYLDDISGYP 658
P G + + + K+QF+ +FIGVN TFFPQHF + G IS YP
Sbjct: 505 PKMLGFNYDLNLAKMQFWLLFIGVNATFFPQHFLGL-QGMPRRISDYP 551
Score = 23.4 bits (48), Expect(2) = 3e-14
Identities = 8/14 (57%), Positives = 10/14 (71%)
Frame = +3
Query: 429 DTYYVVAHFHYVLS 470
+T + HFHYVLS
Sbjct: 476 ETMLFIVHFHYVLS 489
>UniRef50_Q4XXN6 Cluster: Putative uncharacterized protein; n=1;
Plasmodium chabaudi|Rep: Putative uncharacterized
protein - Plasmodium chabaudi
Length = 329
Score = 80.2 bits (189), Expect = 4e-14
Identities = 39/73 (53%), Positives = 51/73 (69%), Gaps = 2/73 (2%)
Frame = +3
Query: 258 IAVPTGIKIFR*LATIHGTQ--INYNPNIL*RLGFVFLFTVGGLTGVILANSSIDITLHD 431
I++PTG K+F L T T I ++ ++L L F+ FT GG TGVIL N +ID+ LHD
Sbjct: 21 ISIPTGTKVFNWLCTYMSTNFGITHSSSLL-SLLFICTFTFGGTTGVILGNGAIDVALHD 79
Query: 432 TYYVVAHFHYVLS 470
TYYV+AHFH+VLS
Sbjct: 80 TYYVIAHFHFVLS 92
Score = 35.5 bits (78), Expect = 1.2
Identities = 17/44 (38%), Positives = 25/44 (56%)
Frame = +1
Query: 199 IFTVGIDIDTRAYFTSATILLLYQQELKFLDD*LQYMELKLIIT 330
++T G+++DTRA+FTS TIL+ K + YM IT
Sbjct: 1 MYTTGLEVDTRAFFTSTTILISIPTGTKVFNWLCTYMSTNFGIT 44
>UniRef50_P14544 Cluster: Cytochrome c oxidase subunit 1; n=7;
Eukaryota|Rep: Cytochrome c oxidase subunit 1 -
Leishmania tarentolae (Sauroleishmania tarentolae)
Length = 549
Score = 79.8 bits (188), Expect = 6e-14
Identities = 43/111 (38%), Positives = 62/111 (55%)
Frame = +1
Query: 10 ILYQHLF*FFGHPEVYILILPGFGIISHIISQERGKKETFXXXXXXXXXXXXXXXXFIV* 189
IL+QH+F FFGHPEVYI++LP FG+IS I+ + G + F V
Sbjct: 232 ILFQHIFWFFGHPEVYIILLPVFGLISTIV-EVIGFRCVFSTVAMIYSMILIAILGMFVW 290
Query: 190 AHHIFTVGIDIDTRAYFTSATILLLYQQELKFLDD*LQYMELKLIITLIFY 342
AHH+F VG+D+D+RAYF +IL+ +K + ++ +IIT Y
Sbjct: 291 AHHMFVVGMDVDSRAYFGGVSILIGLPTCVKLFNWIYSFLYTDMIITFEVY 341
Score = 68.9 bits (161), Expect = 1e-10
Identities = 31/71 (43%), Positives = 46/71 (64%)
Frame = +3
Query: 258 IAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFTVGGLTGVILANSSIDITLHDTY 437
I +PT +K+F + + T + + + F+F+F +G +TG+ L+N IDI LHDTY
Sbjct: 314 IGLPTCVKLFNWIYSFLYTDMIITFEVYFVIMFIFMFLIGAVTGLFLSNVGIDIMLHDTY 373
Query: 438 YVVAHFHYVLS 470
+VV HFHYVLS
Sbjct: 374 FVVGHFHYVLS 384
>UniRef50_A6C5X9 Cluster: Cytochrome caa3 oxidase; n=3;
Bacteria|Rep: Cytochrome caa3 oxidase - Planctomyces
maris DSM 8797
Length = 754
Score = 79.4 bits (187), Expect = 8e-14
Identities = 36/70 (51%), Positives = 49/70 (70%)
Frame = +3
Query: 258 IAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFTVGGLTGVILANSSIDITLHDTY 437
IA+PTGIK+F AT+ G +I +N ++ + F+ F +GGLTG++ A ID L DTY
Sbjct: 330 IAIPTGIKVFNWTATLWGGEIQFNTSLHFAVAFLLQFVIGGLTGIMFAAVPIDWQLTDTY 389
Query: 438 YVVAHFHYVL 467
+VVAHFHYVL
Sbjct: 390 FVVAHFHYVL 399
Score = 63.3 bits (147), Expect = 5e-09
Identities = 33/91 (36%), Positives = 48/91 (52%)
Frame = +1
Query: 10 ILYQHLF*FFGHPEVYILILPGFGIISHIISQERGKKETFXXXXXXXXXXXXXXXXFIV* 189
+L+QH F FGHPEVYILILPGFG+IS +I +K + + V
Sbjct: 248 VLWQHYFWIFGHPEVYILILPGFGMISEVI-PVFSRKPIYGYTFVAASSVAIVLLGYGVW 306
Query: 190 AHHIFTVGIDIDTRAYFTSATILLLYQQELK 282
AHH+F VG+ + +F ++L+ +K
Sbjct: 307 AHHMFAVGLGMYADIFFAVGSLLIAIPTGIK 337
Score = 33.5 bits (73), Expect = 4.9
Identities = 19/57 (33%), Positives = 28/57 (49%)
Frame = +2
Query: 512 YPLFTGLSLNSYILKIQFFTIFIGVNITFFPQHFFRV*PGYLDDISGYPRLIYFHGN 682
+P TG LN I +QF+ +G N+TF QHF + G PR +Y + +
Sbjct: 415 FPKMTGRMLNERIGILQFWLWVLGFNMTFMVQHFL--------GLMGMPRRVYTYAD 463
>UniRef50_Q36097 Cluster: Cytochrome c oxidase subunit 1; n=3;
Theileria|Rep: Cytochrome c oxidase subunit 1 -
Theileria parva
Length = 481
Score = 79.0 bits (186), Expect = 1e-13
Identities = 41/104 (39%), Positives = 58/104 (55%), Gaps = 1/104 (0%)
Frame = +3
Query: 162 NWVIRIYCLSSSYIHCXXXXXXXXXXXXXXXXIAVPTGIKIFR*LATIHGTQ-INYNPNI 338
N +R++ L +SY+H IA+PTG KIF + T+ + I +
Sbjct: 285 NSFVRLFGLGTSYVHIRFGSRYSRYFTTVTILIALPTGNKIFNWVTTLQCVESIKSLGLV 344
Query: 339 L*RLGFVFLFTVGGLTGVILANSSIDITLHDTYYVVAHFHYVLS 470
L + F+ F +GG TGV+L N+ ID+ LHDT YVV HFH+VLS
Sbjct: 345 LFTVLFIVNFVIGGTTGVVLGNAGIDLALHDTVYVVGHFHFVLS 388
Score = 59.7 bits (138), Expect = 7e-08
Identities = 25/31 (80%), Positives = 29/31 (93%)
Frame = +1
Query: 10 ILYQHLF*FFGHPEVYILILPGFGIISHIIS 102
+LYQHLF FFGHPEVYI+ILPGFGIIS ++S
Sbjct: 235 VLYQHLFWFFGHPEVYIMILPGFGIISLLLS 265
>UniRef50_Q11EK8 Cluster: Cytochrome c oxidase, subunit I; n=5;
Proteobacteria|Rep: Cytochrome c oxidase, subunit I -
Mesorhizobium sp. (strain BNC1)
Length = 845
Score = 78.6 bits (185), Expect = 1e-13
Identities = 37/73 (50%), Positives = 55/73 (75%), Gaps = 3/73 (4%)
Frame = +3
Query: 258 IAVPTGIKIFR*LATIHGTQINYN---PNIL*RLGFVFLFTVGGLTGVILANSSIDITLH 428
+A+P+GI++F +ATI ++ + P++ LGF+F+FTVGG+TGV++A ID +H
Sbjct: 337 VAIPSGIQVFSWIATIASSKERFRITTPSLF-VLGFLFIFTVGGVTGVMVALVPIDFQVH 395
Query: 429 DTYYVVAHFHYVL 467
DTY+VVAHFHYVL
Sbjct: 396 DTYFVVAHFHYVL 408
Score = 54.4 bits (125), Expect = 2e-06
Identities = 28/82 (34%), Positives = 43/82 (52%)
Frame = +1
Query: 10 ILYQHLF*FFGHPEVYILILPGFGIISHIISQERGKKETFXXXXXXXXXXXXXXXXFIV* 189
+L+QHLF FFGHPEVYI+ LP G++S I+ + F +
Sbjct: 255 LLWQHLFWFFGHPEVYIIFLPAAGLVSMIV-PTMARHPLVGYRLIVVALIGTGFFSFGLW 313
Query: 190 AHHIFTVGIDIDTRAYFTSATI 255
HH+FT GI + +F++A++
Sbjct: 314 VHHMFTTGIPSLSLGFFSAASM 335
>UniRef50_Q9TAP9 Cluster: Cytochrome c oxidase subunit I; n=2;
Toxoplasma gondii|Rep: Cytochrome c oxidase subunit I -
Toxoplasma gondii
Length = 192
Score = 78.6 bits (185), Expect = 1e-13
Identities = 37/72 (51%), Positives = 49/72 (68%), Gaps = 1/72 (1%)
Frame = +3
Query: 258 IAVPTGIKIFR*LATIHGTQINYNP-NIL*RLGFVFLFTVGGLTGVILANSSIDITLHDT 434
IA+PTG KIF L T + ++ L F+ LFT+GG TGV++ N+ +DI LHDT
Sbjct: 25 IAIPTGTKIFNWLGTYMASHNTTRTIDLWAALCFILLFTLGGTTGVVMGNAGMDIALHDT 84
Query: 435 YYVVAHFHYVLS 470
YY+VAHFH+VLS
Sbjct: 85 YYIVAHFHFVLS 96
Score = 37.5 bits (83), Expect = 0.30
Identities = 14/24 (58%), Positives = 21/24 (87%)
Frame = +1
Query: 190 AHHIFTVGIDIDTRAYFTSATILL 261
AHH+ TVG++ DTRAYF++ TI++
Sbjct: 2 AHHMMTVGLEGDTRAYFSAMTIMI 25
>UniRef50_A5UVJ0 Cluster: Cytochrome-c oxidase; n=2;
Roseiflexus|Rep: Cytochrome-c oxidase - Roseiflexus sp.
RS-1
Length = 641
Score = 77.4 bits (182), Expect = 3e-13
Identities = 35/70 (50%), Positives = 50/70 (71%)
Frame = +3
Query: 258 IAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFTVGGLTGVILANSSIDITLHDTY 437
IAVPTG+KIF LAT+ +N ++L +GF+ +F +GG++GV LA+ I++ D+Y
Sbjct: 329 IAVPTGVKIFNWLATMWQGSLNLTTSMLYAIGFISMFIIGGISGVTLASPPINVQQTDSY 388
Query: 438 YVVAHFHYVL 467
YVVAH HYVL
Sbjct: 389 YVVAHMHYVL 398
Score = 69.7 bits (163), Expect = 6e-11
Identities = 37/94 (39%), Positives = 51/94 (54%)
Frame = +1
Query: 10 ILYQHLF*FFGHPEVYILILPGFGIISHIISQERGKKETFXXXXXXXXXXXXXXXXFIV* 189
+L+QHLF FFGHPEVYILILP GIIS ++ +K F F+V
Sbjct: 247 VLWQHLFWFFGHPEVYILILPTMGIISEVL-PTFSRKPIFGYAFVAYSGVAIGFLGFLVW 305
Query: 190 AHHIFTVGIDIDTRAYFTSATILLLYQQELKFLD 291
AHH+F VG+ A+F +A+ L+ +K +
Sbjct: 306 AHHMFAVGLGPLANAFFGAASFLIAVPTGVKIFN 339
Score = 36.7 bits (81), Expect = 0.53
Identities = 22/58 (37%), Positives = 30/58 (51%)
Frame = +2
Query: 497 GIY**YPLFTGLSLNSYILKIQFFTIFIGVNITFFPQHFFRV*PGYLDDISGYPRLIY 670
GI+ +P TG L+ + K QF+ + I N+TFFP H L +G PR IY
Sbjct: 409 GIFYWFPKMTGRMLDERLGKWQFWLMLISFNLTFFPMH--------LSGNAGMPRRIY 458
>UniRef50_A1ZL77 Cluster: Alternative Cytochrome c oxidase
polypeptide I (Cytochrome BB3 subunit 1) (Oxidase BB(3)
subunit 1); n=20; cellular organisms|Rep: Alternative
Cytochrome c oxidase polypeptide I (Cytochrome BB3
subunit 1) (Oxidase BB(3) subunit 1) - Microscilla
marina ATCC 23134
Length = 635
Score = 77.4 bits (182), Expect = 3e-13
Identities = 34/70 (48%), Positives = 49/70 (70%)
Frame = +3
Query: 258 IAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFTVGGLTGVILANSSIDITLHDTY 437
IAVP+ +K F + T+ I + P ++ +G V +F GG+TG+IL N+++DI LHDTY
Sbjct: 373 IAVPSAVKSFNYITTLWRGNIIFTPAMMFSIGLVSMFISGGVTGIILGNNAMDIQLHDTY 432
Query: 438 YVVAHFHYVL 467
YVVAHFH V+
Sbjct: 433 YVVAHFHLVM 442
Score = 61.7 bits (143), Expect = 2e-08
Identities = 31/91 (34%), Positives = 47/91 (51%)
Frame = +1
Query: 10 ILYQHLF*FFGHPEVYILILPGFGIISHIISQERGKKETFXXXXXXXXXXXXXXXXFIV* 189
+L+QHLF F GHPEVYI+++P GI S +I+ +K F FIV
Sbjct: 291 VLFQHLFWFLGHPEVYIVLIPALGITSEVIA-TNARKPIFGYKAMIGSILGIAVLSFIVW 349
Query: 190 AHHIFTVGIDIDTRAYFTSATILLLYQQELK 282
AHH+F G++ + F T+++ +K
Sbjct: 350 AHHMFVTGMNPFLGSVFMFLTLIIAVPSAVK 380
Score = 34.3 bits (75), Expect = 2.8
Identities = 18/63 (28%), Positives = 30/63 (47%)
Frame = +2
Query: 497 GIY**YPLFTGLSLNSYILKIQFFTIFIGVNITFFPQHFFRV*PGYLDDISGYPRLIYFH 676
G+Y +P G ++ + I F+ F+G + FFP H+ I+G+PR Y
Sbjct: 453 GVYHWFPKMFGRMMDEKLGYIHFWFTFVGAYLVFFPMHYI--------GIAGFPRRYYAF 504
Query: 677 GNY 685
N+
Sbjct: 505 TNF 507
>UniRef50_Q9XKD7 Cluster: Cytochrome c oxidase subunit I; n=1;
Dicyema misakiense|Rep: Cytochrome c oxidase subunit I -
Dicyema misakiense
Length = 473
Score = 77.0 bits (181), Expect = 4e-13
Identities = 39/91 (42%), Positives = 53/91 (58%)
Frame = +1
Query: 10 ILYQHLF*FFGHPEVYILILPGFGIISHIISQERGKKETFXXXXXXXXXXXXXXXXFIV* 189
+LYQHLF FFGHPEVY++ILP FG+ S I Q +V
Sbjct: 213 LLYQHLFWFFGHPEVYVVILPVFGLFSSSI-QLSSLHRIPGELSLVLAMASIALIGSVVW 271
Query: 190 AHHIFTVGIDIDTRAYFTSATILLLYQQELK 282
AHH++T G+DIDTR+YFT+AT+++ +K
Sbjct: 272 AHHMYTAGLDIDTRSYFTAATMIIAVPTGIK 302
Score = 72.9 bits (171), Expect = 7e-12
Identities = 35/72 (48%), Positives = 51/72 (70%), Gaps = 1/72 (1%)
Frame = +3
Query: 258 IAVPTGIKIFR*LATIHGTQ-INYNPNIL*RLGFVFLFTVGGLTGVILANSSIDITLHDT 434
IAVPTGIKIF L+++ + + N ++ F+ F +GG +G+IL+N+S+D LHDT
Sbjct: 295 IAVPTGIKIFTWLSSLLTMKRMTLNSLTFLQVSFIVSFAIGGTSGIILSNASVDHYLHDT 354
Query: 435 YYVVAHFHYVLS 470
YYVVAHFH V++
Sbjct: 355 YYVVAHFHIVVA 366
>UniRef50_Q98P35 Cluster: Cytochrome C oxidase subunit I; n=16;
cellular organisms|Rep: Cytochrome C oxidase subunit I -
Rhizobium loti (Mesorhizobium loti)
Length = 623
Score = 76.6 bits (180), Expect = 5e-13
Identities = 36/70 (51%), Positives = 49/70 (70%)
Frame = +3
Query: 258 IAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFTVGGLTGVILANSSIDITLHDTY 437
IAVP G++IF LATI + + L +GF+ +F +GGLTGV++A+ D +HDTY
Sbjct: 327 IAVPAGLQIFCWLATIWAGRPIFKTPFLFVIGFIVVFVIGGLTGVMVASVPFDTQVHDTY 386
Query: 438 YVVAHFHYVL 467
+VVAHFHYVL
Sbjct: 387 FVVAHFHYVL 396
Score = 56.0 bits (129), Expect = 8e-07
Identities = 27/84 (32%), Positives = 46/84 (54%)
Frame = +1
Query: 10 ILYQHLF*FFGHPEVYILILPGFGIISHIISQERGKKETFXXXXXXXXXXXXXXXXFIV* 189
+L+QHLF FFGHPEVYI+ LP G++S I++ ++ F F +
Sbjct: 245 LLWQHLFWFFGHPEVYIIFLPAVGMVSSIVATFT-QRPVFGYLAMVMALIATGVLAFGLW 303
Query: 190 AHHIFTVGIDIDTRAYFTSATILL 261
HH+F G+ ++FT++++ +
Sbjct: 304 VHHMFVAGLPRLGESFFTASSMAI 327
Score = 33.9 bits (74), Expect = 3.7
Identities = 20/57 (35%), Positives = 27/57 (47%)
Frame = +2
Query: 500 IY**YPLFTGLSLNSYILKIQFFTIFIGVNITFFPQHFFRV*PGYLDDISGYPRLIY 670
IY +P TG ++ + + F IF G N+TFFP H + G PR IY
Sbjct: 408 IYYWFPKLTGRMMSETLGRWSFGLIFSGFNLTFFPMHIL--------GLQGMPRRIY 456
>UniRef50_Q1H1C1 Cluster: Cytochrome-c oxidase; n=1; Methylobacillus
flagellatus KT|Rep: Cytochrome-c oxidase -
Methylobacillus flagellatus (strain KT / ATCC 51484 /
DSM 6875)
Length = 631
Score = 76.6 bits (180), Expect = 5e-13
Identities = 34/70 (48%), Positives = 51/70 (72%)
Frame = +3
Query: 258 IAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFTVGGLTGVILANSSIDITLHDTY 437
IA+P+G++IF +AT+ G++ +L LGF +F +GGL+GV++A+ D+ HDTY
Sbjct: 333 IAIPSGVQIFCWIATLWGSKPKLATPLLHVLGFFLIFIIGGLSGVMVASVPFDMQAHDTY 392
Query: 438 YVVAHFHYVL 467
+VVAHFHYVL
Sbjct: 393 FVVAHFHYVL 402
Score = 56.0 bits (129), Expect = 8e-07
Identities = 29/84 (34%), Positives = 45/84 (53%)
Frame = +1
Query: 10 ILYQHLF*FFGHPEVYILILPGFGIISHIISQERGKKETFXXXXXXXXXXXXXXXXFIV* 189
IL+QHLF FFGHPEVYI+ +P G++S II ++ F F +
Sbjct: 251 ILWQHLFWFFGHPEVYIIFIPALGMVSSIIITFT-QRPIFGYIPIVLSIVAIGFIGFGLW 309
Query: 190 AHHIFTVGIDIDTRAYFTSATILL 261
HH+FT G+ +FT+++ ++
Sbjct: 310 VHHMFTAGLPQLGSNFFTASSAMI 333
Score = 42.3 bits (95), Expect = 0.011
Identities = 17/38 (44%), Positives = 24/38 (63%)
Frame = +2
Query: 497 GIY**YPLFTGLSLNSYILKIQFFTIFIGVNITFFPQH 610
G+Y YP FTG ++ + K+ F+ F G N+TFFP H
Sbjct: 413 GLYYWYPKFTGRMMSERLGKVAFWVTFAGFNLTFFPMH 450
>UniRef50_A7BSH8 Cluster: Cytochrome c oxidase aa3, subunit 1; n=1;
Beggiatoa sp. PS|Rep: Cytochrome c oxidase aa3, subunit
1 - Beggiatoa sp. PS
Length = 525
Score = 76.6 bits (180), Expect = 5e-13
Identities = 33/71 (46%), Positives = 50/71 (70%)
Frame = +3
Query: 258 IAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFTVGGLTGVILANSSIDITLHDTY 437
I++P G+ + + T++G I++ +L LGF+FLF +GGLTGV LA S+ + L +TY
Sbjct: 312 ISIPVGLMVIGLVGTLYGGSISFETPMLYALGFIFLFLIGGLTGVPLALVSLTVHLSETY 371
Query: 438 YVVAHFHYVLS 470
YVV HFHYV++
Sbjct: 372 YVVGHFHYVMA 382
Score = 35.1 bits (77), Expect = 1.6
Identities = 12/31 (38%), Positives = 21/31 (67%)
Frame = +1
Query: 10 ILYQHLF*FFGHPEVYILILPGFGIISHIIS 102
+ YQ+LF F+ HP VY++ LP ++ I++
Sbjct: 229 LTYQNLFWFYSHPAVYVIFLPFMAMVFEIVA 259
>UniRef50_P98005 Cluster: Cytochrome c oxidase polypeptide I+III (EC
1.9.3.1) (Cytochrome c aa(3) subunit 1); n=2; Thermus
thermophilus|Rep: Cytochrome c oxidase polypeptide I+III
(EC 1.9.3.1) (Cytochrome c aa(3) subunit 1) - Thermus
thermophilus (strain HB8 / ATCC 27634 / DSM 579)
Length = 791
Score = 75.8 bits (178), Expect = 9e-13
Identities = 33/70 (47%), Positives = 49/70 (70%)
Frame = +3
Query: 258 IAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFTVGGLTGVILANSSIDITLHDTY 437
IAVPTG+K+F + T+ G ++ + LGF+F F +GG+TGV+L+ + +D HD+Y
Sbjct: 321 IAVPTGVKLFNIIGTLWGGKLQMKTPLYWVLGFIFNFLLGGITGVMLSMTPLDYQFHDSY 380
Query: 438 YVVAHFHYVL 467
+VVAHFH VL
Sbjct: 381 FVVAHFHNVL 390
Score = 47.2 bits (107), Expect = 4e-04
Identities = 27/94 (28%), Positives = 43/94 (45%)
Frame = +1
Query: 10 ILYQHLF*FFGHPEVYILILPGFGIISHIISQERGKKETFXXXXXXXXXXXXXXXXFIV* 189
+L+Q F F+ HP VY+++LP GI++ + S +K F +V
Sbjct: 239 VLFQQFFWFYSHPTVYVMLLPYLGILAEVAS-TFARKPLFGYRQMVWAQMGIVVLGTMVW 297
Query: 190 AHHIFTVGIDIDTRAYFTSATILLLYQQELKFLD 291
AHH+FTVG + F T L+ +K +
Sbjct: 298 AHHMFTVGESTLFQIAFAFFTALIAVPTGVKLFN 331
>UniRef50_Q8ZXD1 Cluster: Cytochrome C oxidase subunit I /III; n=4;
cellular organisms|Rep: Cytochrome C oxidase subunit I
/III - Pyrobaculum aerophilum
Length = 800
Score = 75.4 bits (177), Expect = 1e-12
Identities = 30/71 (42%), Positives = 50/71 (70%)
Frame = +3
Query: 258 IAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFTVGGLTGVILANSSIDITLHDTY 437
+A+P+G+K+F +AT++G +I +L L F+ F VGG+TGV ++D+ LHDTY
Sbjct: 321 VAIPSGVKVFNWVATLYGGRIQLKAPMLFMLTFLLFFIVGGVTGVFFPVITLDLHLHDTY 380
Query: 438 YVVAHFHYVLS 470
+V+ HFHY+++
Sbjct: 381 FVLGHFHYIVN 391
Score = 61.3 bits (142), Expect = 2e-08
Identities = 31/90 (34%), Positives = 44/90 (48%)
Frame = +1
Query: 13 LYQHLF*FFGHPEVYILILPGFGIISHIISQERGKKETFXXXXXXXXXXXXXXXXFIV*A 192
L+QH+F FFGHPEVYIL+LP G++S +I Q ++ + F V
Sbjct: 240 LFQHIFWFFGHPEVYILVLPAMGLVSEVI-QRMARRRAYGYTAIAISSVAIASISFAVWM 298
Query: 193 HHIFTVGIDIDTRAYFTSATILLLYQQELK 282
HH+FT D R AT+ + +K
Sbjct: 299 HHMFTAVQDFAPRVAMAIATMAVAIPSGVK 328
>UniRef50_A6C0L1 Cluster: Cytochrome c oxidase subunit I; n=1;
Planctomyces maris DSM 8797|Rep: Cytochrome c oxidase
subunit I - Planctomyces maris DSM 8797
Length = 606
Score = 74.9 bits (176), Expect = 2e-12
Identities = 32/70 (45%), Positives = 48/70 (68%)
Frame = +3
Query: 258 IAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFTVGGLTGVILANSSIDITLHDTY 437
IA+P+ IK F ATI G ++ +N L + F+ +F VGGL+G+ +A +D+ HDTY
Sbjct: 363 IALPSAIKTFNWTATIWGGKLEFNTVTLNCIAFLSMFIVGGLSGIFMAAVPVDVYFHDTY 422
Query: 438 YVVAHFHYVL 467
++VAHFHY+L
Sbjct: 423 FIVAHFHYIL 432
Score = 54.0 bits (124), Expect = 3e-06
Identities = 29/91 (31%), Positives = 47/91 (51%)
Frame = +1
Query: 10 ILYQHLF*FFGHPEVYILILPGFGIISHIISQERGKKETFXXXXXXXXXXXXXXXXFIV* 189
+L+QHLF F+ HP VYI++LP G++S ++S +K F FIV
Sbjct: 281 LLWQHLFWFYSHPAVYIMLLPIMGMVSDMLSC-MCRKPLFGYKPMVFSMSAIASLGFIVW 339
Query: 190 AHHIFTVGIDIDTRAYFTSATILLLYQQELK 282
HH+FT G++ F +T+++ +K
Sbjct: 340 GHHMFTSGMNPAVGMAFMVSTMMIALPSAIK 370
Score = 35.1 bits (77), Expect = 1.6
Identities = 17/39 (43%), Positives = 20/39 (51%)
Frame = +2
Query: 497 GIY**YPLFTGLSLNSYILKIQFFTIFIGVNITFFPQHF 613
GI +P G +N + K F FIG N TFFP HF
Sbjct: 443 GIQFWFPKMFGRMMNEKLGKTHFVLTFIGANGTFFPMHF 481
>UniRef50_O67935 Cluster: Cytochrome c oxidase subunit I; n=1;
Aquifex aeolicus|Rep: Cytochrome c oxidase subunit I -
Aquifex aeolicus
Length = 485
Score = 74.1 bits (174), Expect = 3e-12
Identities = 35/70 (50%), Positives = 49/70 (70%)
Frame = +3
Query: 258 IAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFTVGGLTGVILANSSIDITLHDTY 437
IAVPTGIKIF + T++ I++ +L LG VF+F +GGLTG+ L +ID+ + D+
Sbjct: 267 IAVPTGIKIFNWMLTLYRGAIHFRSQMLYALGGVFMFLIGGLTGLPLGMVAIDLGVSDSL 326
Query: 438 YVVAHFHYVL 467
+VV HFHYVL
Sbjct: 327 FVVGHFHYVL 336
Score = 51.2 bits (117), Expect = 2e-05
Identities = 27/94 (28%), Positives = 44/94 (46%)
Frame = +1
Query: 10 ILYQHLF*FFGHPEVYILILPGFGIISHIISQERGKKETFXXXXXXXXXXXXXXXXFIV* 189
++YQ++F F+ HP VY+ +LP FG S II ++ F F +
Sbjct: 185 LIYQNIFWFYSHPVVYVQVLPVFGFYSEII-PVFARRPLFGYTSMVFAVWAITAVSFFLW 243
Query: 190 AHHIFTVGIDIDTRAYFTSATILLLYQQELKFLD 291
HH+F G+ TR F+ T+L+ +K +
Sbjct: 244 IHHMFVSGVPNWTRVLFSYTTLLIAVPTGIKIFN 277
>UniRef50_Q6RJT8 Cluster: Cytochrome c oxidase subunit 2; n=1;
Harmonia axyridis|Rep: Cytochrome c oxidase subunit 2 -
Harmonia axyridis (Multicolored Asian lady beetle)
Length = 193
Score = 73.7 bits (173), Expect = 4e-12
Identities = 30/57 (52%), Positives = 36/57 (63%)
Frame = +3
Query: 21 TFILIFWTS*SLYFNFTRIWYNFSYYFTRKRKKRNFWLFRNNLCYTSNWVIRIYCLS 191
+ ++IFW+S SLYFN IWYNF YY+T K K W F NNLCY S W I +S
Sbjct: 2 SLVMIFWSSSSLYFNSPSIWYNFPYYYTSKSGKNCLWFFSNNLCYISYWTSSICSMS 58
>UniRef50_P34956 Cluster: Quinol oxidase subunit 1 (EC 1.10.3.-)
(Quinol oxidase polypeptide I) (Quinol oxidase aa3-600,
subunit qoxB) (Oxidase aa(3)-600 subunit 1); n=45;
Bacillales|Rep: Quinol oxidase subunit 1 (EC 1.10.3.-)
(Quinol oxidase polypeptide I) (Quinol oxidase aa3-600,
subunit qoxB) (Oxidase aa(3)-600 subunit 1) - Bacillus
subtilis
Length = 649
Score = 73.7 bits (173), Expect = 4e-12
Identities = 32/70 (45%), Positives = 51/70 (72%)
Frame = +3
Query: 258 IAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFTVGGLTGVILANSSIDITLHDTY 437
I++PTG+KIF L T++ +I++ +L L F+ F +GG+TGV+LA ++ D H+TY
Sbjct: 351 ISIPTGVKIFNWLFTMYKGRISFTTPMLWALAFIPNFVIGGVTGVMLAMAAADYQYHNTY 410
Query: 438 YVVAHFHYVL 467
++V+HFHYVL
Sbjct: 411 FLVSHFHYVL 420
Score = 60.9 bits (141), Expect = 3e-08
Identities = 31/84 (36%), Positives = 45/84 (53%)
Frame = +1
Query: 10 ILYQHLF*FFGHPEVYILILPGFGIISHIISQERGKKETFXXXXXXXXXXXXXXXXFIV* 189
+L+ +LF +GHPEVYI+ILP FGI S IIS +K+ F F+V
Sbjct: 269 MLWANLFWIWGHPEVYIVILPAFGIFSEIIS-SFARKQLFGYKAMVGSIIAISVLSFLVW 327
Query: 190 AHHIFTVGIDIDTRAYFTSATILL 261
HH FT+G ++F+ T+ +
Sbjct: 328 THHFFTMGNSASVNSFFSITTMAI 351
Score = 37.9 bits (84), Expect = 0.23
Identities = 23/56 (41%), Positives = 27/56 (48%)
Frame = +2
Query: 512 YPLFTGLSLNSYILKIQFFTIFIGVNITFFPQHFFRV*PGYLDDISGYPRLIYFHG 679
YP G LN I K F+ IG NI FFPQ+F + G PR IY +G
Sbjct: 436 YPKMFGHKLNERIGKWFFWIFMIGFNICFFPQYFL--------GLQGMPRRIYTYG 483
>UniRef50_Q6ED52 Cluster: Cox1-i4 protein; n=1; Candida
stellata|Rep: Cox1-i4 protein - Candida stellata (Yeast)
Length = 676
Score = 72.9 bits (171), Expect = 7e-12
Identities = 35/74 (47%), Positives = 45/74 (60%)
Frame = +1
Query: 10 ILYQHLF*FFGHPEVYILILPGFGIISHIISQERGKKETFXXXXXXXXXXXXXXXXFIV* 189
+LY+H+F FFGHPEVYILI+P FG++S I+ Q KK F F V
Sbjct: 247 LLYEHIFWFFGHPEVYILIVPVFGVVSQIV-QVYAKKPIFGKIGMIYAMASIGFLGFCVW 305
Query: 190 AHHIFTVGIDIDTR 231
+HH+FTVG+D D R
Sbjct: 306 SHHMFTVGLDADKR 319
>UniRef50_Q9WWR2 Cluster: Ubiquinol oxidase subunit 1 (EC 1.10.3.-)
(Ubiquinol oxidase polypeptide I) (Cytochrome o subunit
1) (Oxidase BO(3) subunit 1); n=240; Bacteria|Rep:
Ubiquinol oxidase subunit 1 (EC 1.10.3.-) (Ubiquinol
oxidase polypeptide I) (Cytochrome o subunit 1) (Oxidase
BO(3) subunit 1) - Pseudomonas putida
Length = 672
Score = 72.5 bits (170), Expect = 9e-12
Identities = 30/70 (42%), Positives = 49/70 (70%)
Frame = +3
Query: 258 IAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFTVGGLTGVILANSSIDITLHDTY 437
I++PTG+K+F L TI+ ++ + I+ LGF+ F++GG+TGV+LA D LH++
Sbjct: 355 ISIPTGVKLFNWLFTIYQGRLRFTAPIMWTLGFMITFSIGGMTGVLLAVPGADFVLHNSL 414
Query: 438 YVVAHFHYVL 467
+V+AHFH V+
Sbjct: 415 FVIAHFHNVI 424
Score = 60.9 bits (141), Expect = 3e-08
Identities = 32/84 (38%), Positives = 43/84 (51%)
Frame = +1
Query: 10 ILYQHLF*FFGHPEVYILILPGFGIISHIISQERGKKETFXXXXXXXXXXXXXXXXFIV* 189
++Y +LF +GHPEVYILILP FG+ S + S GK+ F F V
Sbjct: 273 MMYVNLFWAWGHPEVYILILPAFGVFSEVTSTFAGKR-LFGHHSMIYASGAIAVLGFAVW 331
Query: 190 AHHIFTVGIDIDTRAYFTSATILL 261
HH FT+G +F AT+L+
Sbjct: 332 LHHFFTMGAGASVNTFFGLATMLI 355
>UniRef50_Q9XLV8 Cluster: Cytochrome c oxidase subunit I; n=1;
Diplonema papillatum|Rep: Cytochrome c oxidase subunit I
- Diplonema papillatum
Length = 287
Score = 71.3 bits (167), Expect = 2e-11
Identities = 32/71 (45%), Positives = 49/71 (69%)
Frame = +3
Query: 258 IAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFTVGGLTGVILANSSIDITLHDTY 437
IA+PT IK+F + + + + + F+ +F +GG+TG++LANS +D+ +HD+Y
Sbjct: 69 IALPTSIKVFSWMVGLRRMALASSAAWY-VVAFLLMFLLGGVTGLVLANSEVDLVMHDSY 127
Query: 438 YVVAHFHYVLS 470
YVVAHFHYVLS
Sbjct: 128 YVVAHFHYVLS 138
Score = 60.9 bits (141), Expect = 3e-08
Identities = 29/77 (37%), Positives = 44/77 (57%)
Frame = +1
Query: 52 VYILILPGFGIISHIISQERGKKETFXXXXXXXXXXXXXXXXFIV*AHHIFTVGIDIDTR 231
VY++ILP FG++SH + + G + + V AHH+FTVG+D+DTR
Sbjct: 1 VYVIILPVFGLVSHSLHRG-GLFSLYNMLGMVYAMIAIAVVGYFVWAHHMFTVGLDVDTR 59
Query: 232 AYFTSATILLLYQQELK 282
YF+SAT+L+ +K
Sbjct: 60 VYFSSATLLIALPTSIK 76
>UniRef50_Q18JR5 Cluster: Cytochrome-c-like terminal oxidase,
subunit I; n=2; Halobacteriaceae|Rep: Cytochrome-c-like
terminal oxidase, subunit I - Haloquadratum walsbyi
(strain DSM 16790)
Length = 634
Score = 70.9 bits (166), Expect = 3e-11
Identities = 32/70 (45%), Positives = 45/70 (64%)
Frame = +3
Query: 258 IAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFTVGGLTGVILANSSIDITLHDTY 437
IAVP+ +K F + T+ I +L +GFV F +GG+TGV LA+ +D+ LH TY
Sbjct: 396 IAVPSAVKTFNWITTMWNGNIRLTTPMLFSVGFVANFILGGVTGVFLASIPVDLVLHATY 455
Query: 438 YVVAHFHYVL 467
YVV HFHY++
Sbjct: 456 YVVGHFHYIV 465
Score = 69.3 bits (162), Expect = 8e-11
Identities = 36/91 (39%), Positives = 51/91 (56%)
Frame = +1
Query: 10 ILYQHLF*FFGHPEVYILILPGFGIISHIISQERGKKETFXXXXXXXXXXXXXXXXFIV* 189
IL+QHLF FFGHPEVYI++LP GIIS+I+ + G++ F F V
Sbjct: 314 ILWQHLFWFFGHPEVYIIVLPPMGIISYILPRFSGRR-LFGFKFVVYSTLAIGVLSFGVW 372
Query: 190 AHHIFTVGIDIDTRAYFTSATILLLYQQELK 282
AHH+F G+D RA F + ++ + +K
Sbjct: 373 AHHMFATGLDPRLRASFMAVSLAIAVPSAVK 403
Score = 34.3 bits (75), Expect = 2.8
Identities = 16/35 (45%), Positives = 21/35 (60%)
Frame = +2
Query: 497 GIY**YPLFTGLSLNSYILKIQFFTIFIGVNITFF 601
GIY +PL+TG + K+ F+ IG NITFF
Sbjct: 476 GIYYWFPLYTGRMYQRTLGKMHFWLSMIGTNITFF 510
>UniRef50_P33518 Cluster: Cytochrome c oxidase polypeptide 1; n=4;
Halobacteriaceae|Rep: Cytochrome c oxidase polypeptide 1
- Halobacterium salinarium (Halobacterium halobium)
Length = 593
Score = 70.5 bits (165), Expect = 4e-11
Identities = 30/70 (42%), Positives = 47/70 (67%)
Frame = +3
Query: 258 IAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFTVGGLTGVILANSSIDITLHDTY 437
I++P+ +K+F + T+ ++ +L +GFV F +GG+TGV LA ID+ LHDTY
Sbjct: 365 ISIPSAVKVFNWITTMWNGKLRLTAPMLFCIGFVQNFIIGGVTGVFLAVIPIDLILHDTY 424
Query: 438 YVVAHFHYVL 467
YVV HFH+++
Sbjct: 425 YVVGHFHFIV 434
Score = 68.1 bits (159), Expect = 2e-10
Identities = 36/91 (39%), Positives = 50/91 (54%)
Frame = +1
Query: 10 ILYQHLF*FFGHPEVYILILPGFGIISHIISQERGKKETFXXXXXXXXXXXXXXXXFIV* 189
I +QHLF FFGHPEVY+L+LP GI+S I+ + G+K F F V
Sbjct: 283 IFWQHLFWFFGHPEVYVLVLPPMGIVSLILPKFSGRK-LFGFKFVVYSTLAIGVLSFGVW 341
Query: 190 AHHIFTVGIDIDTRAYFTSATILLLYQQELK 282
AHH+FT GID R+ F + ++ + +K
Sbjct: 342 AHHMFTTGIDPRIRSSFMAVSLAISIPSAVK 372
>UniRef50_Q7NQZ0 Cluster: Cytochrome o ubiquinol oxidase, subunit I;
n=22; Bacteria|Rep: Cytochrome o ubiquinol oxidase,
subunit I - Chromobacterium violaceum
Length = 680
Score = 69.7 bits (163), Expect = 6e-11
Identities = 29/67 (43%), Positives = 47/67 (70%)
Frame = +3
Query: 258 IAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFTVGGLTGVILANSSIDITLHDTY 437
I++PTG+K+F L TI+ ++ + IL LGF+ F++GG+TGV+LA D LH++
Sbjct: 356 ISIPTGVKLFNWLFTIYKGRLRFETPILWTLGFMVTFSIGGMTGVLLAVPGADYVLHNSL 415
Query: 438 YVVAHFH 458
+++AHFH
Sbjct: 416 FLIAHFH 422
Score = 64.1 bits (149), Expect = 3e-09
Identities = 32/84 (38%), Positives = 47/84 (55%)
Frame = +1
Query: 10 ILYQHLF*FFGHPEVYILILPGFGIISHIISQERGKKETFXXXXXXXXXXXXXXXXFIV* 189
++Y +LF +GHPEVYIL+LP FGI S ++S GK+ F F+V
Sbjct: 274 MMYLNLFWAWGHPEVYILVLPAFGIFSEVVSTFAGKR-LFGHKSMIYASGAISVLGFMVW 332
Query: 190 AHHIFTVGIDIDTRAYFTSATILL 261
HH FT+G + A+F AT+++
Sbjct: 333 LHHFFTMGSGANVNAFFGIATMII 356
>UniRef50_Q0AI64 Cluster: Cytochrome-c oxidase; n=3;
Proteobacteria|Rep: Cytochrome-c oxidase - Nitrosomonas
eutropha (strain C71)
Length = 703
Score = 68.9 bits (161), Expect = 1e-10
Identities = 28/67 (41%), Positives = 48/67 (71%)
Frame = +3
Query: 258 IAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFTVGGLTGVILANSSIDITLHDTY 437
I +PTG+KI+ + T+ +I ++ ++ L F+FLF +GG+TG++LAN +D +H+T
Sbjct: 375 IGIPTGVKIYDWMWTMLRGRIRFSVPMIYSLAFIFLFVIGGITGIMLANPILDYQVHNTV 434
Query: 438 YVVAHFH 458
++VAHFH
Sbjct: 435 FLVAHFH 441
Score = 57.2 bits (132), Expect = 4e-07
Identities = 34/96 (35%), Positives = 47/96 (48%)
Frame = +1
Query: 4 HEILYQHLF*FFGHPEVYILILPGFGIISHIISQERGKKETFXXXXXXXXXXXXXXXXFI 183
+++ + ++F FGHPEVYILILP FG+ S I S G K F F+
Sbjct: 291 NQMNFLNMFWLFGHPEVYILILPAFGVYSEIFSTFSG-KVLFGYKSLVWATISIAFLSFL 349
Query: 184 V*AHHIFTVGIDIDTRAYFTSATILLLYQQELKFLD 291
V HH FT+G A F A++L+ +K D
Sbjct: 350 VWLHHFFTMGQSGHINAVFGIASMLIGIPTGVKIYD 385
>UniRef50_Q0I8U1 Cluster: Cytochrome c oxidase subunit I; n=16;
Bacteria|Rep: Cytochrome c oxidase subunit I -
Synechococcus sp. (strain CC9311)
Length = 564
Score = 68.5 bits (160), Expect = 1e-10
Identities = 32/70 (45%), Positives = 46/70 (65%)
Frame = +3
Query: 258 IAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFTVGGLTGVILANSSIDITLHDTY 437
IA+PTG+K+F L T+ + N +L +G + F G+TGV+LA IDI + +TY
Sbjct: 337 IAIPTGVKVFAWLGTLWAGNLRLNTPMLFCIGGLINFIFAGITGVMLATVPIDIHVGNTY 396
Query: 438 YVVAHFHYVL 467
+VVAHFHYV+
Sbjct: 397 FVVAHFHYVI 406
Score = 52.4 bits (120), Expect = 1e-05
Identities = 29/84 (34%), Positives = 39/84 (46%)
Frame = +1
Query: 10 ILYQHLF*FFGHPEVYILILPGFGIISHIISQERGKKETFXXXXXXXXXXXXXXXXFIV* 189
+L+QH F F+ HP VY+L+LP FGI S + +K F IV
Sbjct: 255 VLFQHFFWFYSHPAVYVLVLPVFGIFSELF-PVYARKPLFGYRFVAIASFGITFLSLIVW 313
Query: 190 AHHIFTVGIDIDTRAYFTSATILL 261
AHH+F G R F T+L+
Sbjct: 314 AHHMFYTGTPNWMRHIFMFTTMLI 337
>UniRef50_A5FXH8 Cluster: Cytochrome-c oxidase; n=1; Acidiphilium
cryptum JF-5|Rep: Cytochrome-c oxidase - Acidiphilium
cryptum (strain JF-5)
Length = 689
Score = 68.5 bits (160), Expect = 1e-10
Identities = 29/70 (41%), Positives = 49/70 (70%)
Frame = +3
Query: 258 IAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFTVGGLTGVILANSSIDITLHDTY 437
+ +PTG+K+F T+ ++ + P +L LG +FL VGGLTG++LA +I+ T+H++
Sbjct: 374 VGIPTGVKVFNWALTLWRGRLRFEPPMLWALGALFLLLVGGLTGMMLAIPAINYTVHNSV 433
Query: 438 YVVAHFHYVL 467
+VVAHFH ++
Sbjct: 434 FVVAHFHCMM 443
Score = 54.4 bits (125), Expect = 2e-06
Identities = 30/84 (35%), Positives = 43/84 (51%)
Frame = +1
Query: 10 ILYQHLF*FFGHPEVYILILPGFGIISHIISQERGKKETFXXXXXXXXXXXXXXXXFIV* 189
+LY +LF +GHPEVY ++LP FG IS II +K F + V
Sbjct: 292 MLYTNLFWIWGHPEVYFVVLPAFGFISEII-PTFAEKPLFGYATMVIATFAIGGISWGVW 350
Query: 190 AHHIFTVGIDIDTRAYFTSATILL 261
HH FT+G +F++AT+L+
Sbjct: 351 LHHFFTMGAGPGINIFFSTATMLV 374
>UniRef50_P39481 Cluster: Quinol oxidase subunit 1/3; n=5;
Sulfolobaceae|Rep: Quinol oxidase subunit 1/3 -
Sulfolobus acidocaldarius
Length = 788
Score = 68.5 bits (160), Expect = 1e-10
Identities = 28/70 (40%), Positives = 45/70 (64%)
Frame = +3
Query: 258 IAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFTVGGLTGVILANSSIDITLHDTY 437
IA+P+G+K+ AT++G +I Y + + F+ +F +GG+TGV ID L+ TY
Sbjct: 310 IAIPSGVKVLNWTATLYGGEIRYKTPTILLISFIVMFLLGGITGVFFPLVPIDYALNGTY 369
Query: 438 YVVAHFHYVL 467
+VV HFHY++
Sbjct: 370 FVVGHFHYMV 379
Score = 51.2 bits (117), Expect = 2e-05
Identities = 31/86 (36%), Positives = 45/86 (52%), Gaps = 1/86 (1%)
Frame = +1
Query: 10 ILYQHLF*FFGHPEVYILILPGFGIISHIISQERGKKETFXXXXXXXXXXXXXXXXFI-V 186
+L+Q LF FFGHPEVYILILP G++S ++ + ++E F + V
Sbjct: 227 VLWQQLFWFFGHPEVYILILPAMGLVSELL-PKMARREIFGYTAIALSSIAIAFLSALGV 285
Query: 187 *AHHIFTVGIDIDTRAYFTSATILLL 264
HH+FT ID +SAT + +
Sbjct: 286 WMHHMFT-AIDNTLVQIVSSATTMAI 310
>UniRef50_A0VUI8 Cluster: Cytochrome-c oxidase; n=1; Dinoroseobacter
shibae DFL 12|Rep: Cytochrome-c oxidase -
Dinoroseobacter shibae DFL 12
Length = 853
Score = 68.1 bits (159), Expect = 2e-10
Identities = 31/70 (44%), Positives = 48/70 (68%)
Frame = +3
Query: 258 IAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFTVGGLTGVILANSSIDITLHDTY 437
+AVPTG++IF +AT+ + + LGF+F+F +GG+TGV++A ++ HD+Y
Sbjct: 353 VAVPTGVQIFCFIATLSQGKPRLTVPMHFILGFLFIFVLGGMTGVMVAAVPFNLQAHDSY 412
Query: 438 YVVAHFHYVL 467
+VVAH HYVL
Sbjct: 413 FVVAHLHYVL 422
Score = 54.0 bits (124), Expect = 3e-06
Identities = 28/84 (33%), Positives = 46/84 (54%)
Frame = +1
Query: 10 ILYQHLF*FFGHPEVYILILPGFGIISHIISQERGKKETFXXXXXXXXXXXXXXXXFIV* 189
+L+QHLF FGHPEVYI+ LP G+++ ++ G K F F +
Sbjct: 271 LLWQHLFWLFGHPEVYIIFLPAAGMVATMLPTFVG-KPLFGYGFAVAAVVTMSFLSFGLW 329
Query: 190 AHHIFTVGIDIDTRAYFTSATILL 261
AHH+F G+ I + + F++A+ ++
Sbjct: 330 AHHMFATGLPILSLSLFSAASTMV 353
>UniRef50_Q79VD7 Cluster: Cytochrome c oxidase subunit 1; n=93;
Actinobacteria (class)|Rep: Cytochrome c oxidase subunit
1 - Corynebacterium glutamicum (Brevibacterium flavum)
Length = 584
Score = 67.7 bits (158), Expect = 2e-10
Identities = 29/70 (41%), Positives = 46/70 (65%)
Frame = +3
Query: 258 IAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFTVGGLTGVILANSSIDITLHDTY 437
I+VPTG+K F + T+ I + ++ +GF+ F GGLTG++LA+ +D L D+Y
Sbjct: 334 ISVPTGVKFFNWVGTMWKGHITWETPMIWSVGFMATFLFGGLTGIMLASPPLDFHLADSY 393
Query: 438 YVVAHFHYVL 467
+++AHFHY L
Sbjct: 394 FLIAHFHYTL 403
Score = 59.3 bits (137), Expect = 9e-08
Identities = 35/94 (37%), Positives = 47/94 (50%)
Frame = +1
Query: 10 ILYQHLF*FFGHPEVYILILPGFGIISHIISQERGKKETFXXXXXXXXXXXXXXXXFIV* 189
+L+QHLF FFGHPEVY+L LP FGI+S II +K F V
Sbjct: 254 LLWQHLFWFFGHPEVYVLALPFFGIVSEII-PVFSRKPMFGYVGLIFATLSIGALSMAVW 312
Query: 190 AHHIFTVGIDIDTRAYFTSATILLLYQQELKFLD 291
AHH+F G + +F+ T L+ +KF +
Sbjct: 313 AHHMFVTGAVL--LPFFSFMTFLISVPTGVKFFN 344
>UniRef50_P98000 Cluster: Alternative cytochrome c oxidase subunit 1
(EC 1.9.3.1) (Alternative cytochrome c oxidase
polypeptide I) (Cytochrome BB3 subunit 1) (Oxidase BB(3)
subunit 1); n=25; Bacteria|Rep: Alternative cytochrome c
oxidase subunit 1 (EC 1.9.3.1) (Alternative cytochrome c
oxidase polypeptide I) (Cytochrome BB3 subunit 1)
(Oxidase BB(3) subunit 1) - Bradyrhizobium japonicum
Length = 591
Score = 66.9 bits (156), Expect = 4e-10
Identities = 31/70 (44%), Positives = 44/70 (62%)
Frame = +3
Query: 258 IAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFTVGGLTGVILANSSIDITLHDTY 437
IA+PT IK++ + T+ I+ +L LGF+ F GGLTG+ L N +D+ L DT
Sbjct: 351 IAIPTAIKVYNWVLTLWHGDIHLTVPMLFALGFIITFVNGGLTGLFLGNVVVDVPLSDTM 410
Query: 438 YVVAHFHYVL 467
+VVAHFH V+
Sbjct: 411 FVVAHFHMVM 420
Score = 66.1 bits (154), Expect = 8e-10
Identities = 33/91 (36%), Positives = 49/91 (53%)
Frame = +1
Query: 10 ILYQHLF*FFGHPEVYILILPGFGIISHIISQERGKKETFXXXXXXXXXXXXXXXXFIV* 189
+L+QHLF FFGHPEVYI+ LP FGI+S +IS +K F F+V
Sbjct: 269 LLFQHLFWFFGHPEVYIVALPAFGIVSDLIS-THARKNIFGYRMMVWAIVAIGALSFVVW 327
Query: 190 AHHIFTVGIDIDTRAYFTSATILLLYQQELK 282
AHH++ G+ +F + T+++ +K
Sbjct: 328 AHHMYVSGMYPYFGFFFATTTLIIAIPTAIK 358
Score = 37.5 bits (83), Expect = 0.30
Identities = 16/38 (42%), Positives = 21/38 (55%)
Frame = +2
Query: 500 IY**YPLFTGLSLNSYILKIQFFTIFIGVNITFFPQHF 613
IY YP TG LN + K F+ F+G + FFP H+
Sbjct: 432 IYHWYPKVTGRMLNDVLGKFHFWVTFLGAYLIFFPMHY 469
>UniRef50_Q9TCV5 Cluster: Cytochrome c oxidase subunit I; n=6;
Digenea|Rep: Cytochrome c oxidase subunit I -
Echinostoma hortense
Length = 154
Score = 66.5 bits (155), Expect = 6e-10
Identities = 31/76 (40%), Positives = 41/76 (53%)
Frame = +1
Query: 34 FFGHPEVYILILPGFGIISHIISQERGKKETFXXXXXXXXXXXXXXXXFIV*AHHIFTVG 213
FFGHPEVY+LILP FGI+SHI F +V AHH+F VG
Sbjct: 1 FFGHPEVYVLILPVFGIVSHICMTFTNNDSLFGYYGLVLAMLAIVCLGSVVWAHHMFMVG 60
Query: 214 IDIDTRAYFTSATILL 261
D+ T +F+S T+++
Sbjct: 61 YDVHTAVFFSSVTMVI 76
>UniRef50_A7H8L4 Cluster: Cytochrome c oxidase subunit I type; n=38;
Bacteria|Rep: Cytochrome c oxidase subunit I type -
Anaeromyxobacter sp. Fw109-5
Length = 555
Score = 65.3 bits (152), Expect = 1e-09
Identities = 27/70 (38%), Positives = 43/70 (61%)
Frame = +3
Query: 258 IAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFTVGGLTGVILANSSIDITLHDTY 437
+ + T IK+F AT++ I + GF+F GG+TG+ LA S+D+ HDTY
Sbjct: 330 VGIFTAIKVFNWTATLYKGSIYFATPFAYFAGFLFFLVFGGMTGIALATVSLDVHWHDTY 389
Query: 438 YVVAHFHYVL 467
++VAHFH+++
Sbjct: 390 FIVAHFHFIM 399
Score = 48.4 bits (110), Expect = 2e-04
Identities = 22/68 (32%), Positives = 32/68 (47%)
Frame = +1
Query: 10 ILYQHLF*FFGHPEVYILILPGFGIISHIISQERGKKETFXXXXXXXXXXXXXXXXFIV* 189
+L+QH F F+ HP VYI++LP +IS ++ +K F F
Sbjct: 248 VLFQHFFWFYSHPAVYIMVLPAMAVISEVVC-AFSRKNIFGYKAVAYSSLGIAFVGFFTW 306
Query: 190 AHHIFTVG 213
HH+FT G
Sbjct: 307 GHHMFTSG 314
>UniRef50_Q9YDX6 Cluster: Heme-copper oxidase subunit I+III; n=1;
Aeropyrum pernix|Rep: Heme-copper oxidase subunit I+III
- Aeropyrum pernix
Length = 815
Score = 65.3 bits (152), Expect = 1e-09
Identities = 35/108 (32%), Positives = 55/108 (50%)
Frame = +1
Query: 10 ILYQHLF*FFGHPEVYILILPGFGIISHIISQERGKKETFXXXXXXXXXXXXXXXXFIV* 189
+L+ HLF FFGHPEVYIL+ P G ++ +IS G K + F+V
Sbjct: 237 LLWDHLFWFFGHPEVYILLFPALGAMADVISTFSG-KPIYAKRYILTAFLIATIISFVVW 295
Query: 190 AHHIFTVGIDIDTRAYFTSATILLLYQQELKFLDD*LQYMELKLIITL 333
HH+F G +I TR +++ TIL+ E+ + + +L+ T+
Sbjct: 296 MHHMFITGTNIYTRLFYSITTILISIPFEMAVMSFIFTLYKGRLVYTV 343
Score = 53.2 bits (122), Expect = 6e-06
Identities = 25/70 (35%), Positives = 42/70 (60%)
Frame = +3
Query: 258 IAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFTVGGLTGVILANSSIDITLHDTY 437
I++P + + + T++ ++ Y +L +G + F +GG TGV L + +ID TY
Sbjct: 319 ISIPFEMAVMSFIFTLYKGRLVYTVPMLFAVGALLNFIIGGSTGVYLGSIAIDRGFRGTY 378
Query: 438 YVVAHFHYVL 467
+VVAHFHY+L
Sbjct: 379 WVVAHFHYIL 388
>UniRef50_Q1CZF1 Cluster: Cytochrome c oxidase, subunit I; n=1;
Myxococcus xanthus DK 1622|Rep: Cytochrome c oxidase,
subunit I - Myxococcus xanthus (strain DK 1622)
Length = 556
Score = 64.9 bits (151), Expect = 2e-09
Identities = 26/70 (37%), Positives = 42/70 (60%)
Frame = +3
Query: 258 IAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFTVGGLTGVILANSSIDITLHDTY 437
+ V T IK+F + T++ + + GF+F GG+TG+ L S+D+ HDTY
Sbjct: 337 VGVFTAIKVFNWVGTVYKGAVEFKTPFAYFCGFLFFTVFGGMTGIALGTVSLDVAWHDTY 396
Query: 438 YVVAHFHYVL 467
+VVAHFH+++
Sbjct: 397 FVVAHFHFIM 406
Score = 52.8 bits (121), Expect = 8e-06
Identities = 23/68 (33%), Positives = 35/68 (51%)
Frame = +1
Query: 10 ILYQHLF*FFGHPEVYILILPGFGIISHIISQERGKKETFXXXXXXXXXXXXXXXXFIV* 189
+L+QHLF F+ HP VYI++LP FG++S +++ +K F F
Sbjct: 255 VLFQHLFWFYSHPAVYIMVLPSFGVMSEVVA-TYSRKNIFGYRAVAYSSLGIAFVGFFAW 313
Query: 190 AHHIFTVG 213
HH+F G
Sbjct: 314 GHHMFVSG 321
>UniRef50_Q9MLW1 Cluster: Cytochrome c oxidase subunit I; n=5;
Naupactini|Rep: Cytochrome c oxidase subunit I -
Galapaganus collaris
Length = 406
Score = 64.9 bits (151), Expect = 2e-09
Identities = 37/68 (54%), Positives = 40/68 (58%)
Frame = +3
Query: 267 PTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFTVGGLTGVILANSSIDITLHDTYYVV 446
P G+K F + + G P I F GGLTGVILANSS DI LHDTYYVV
Sbjct: 234 PPGVK-FLGDSYLSGNFNFXKPQIFMIFSIYFSIHGGGLTGVILANSSXDIILHDTYYVV 292
Query: 447 AHFHYVLS 470
AH HYVLS
Sbjct: 293 AHXHYVLS 300
Score = 35.5 bits (78), Expect = 1.2
Identities = 14/19 (73%), Positives = 17/19 (89%)
Frame = +1
Query: 553 KNSIFYNIYWSKYNIFSTT 609
KN+IF IYWSK+NIFS+T
Sbjct: 328 KNTIFSYIYWSKFNIFSST 346
>UniRef50_Q9RR77 Cluster: Cytochrome c oxidase, subunit I; n=2;
Deinococcus|Rep: Cytochrome c oxidase, subunit I -
Deinococcus radiodurans
Length = 820
Score = 64.5 bits (150), Expect = 2e-09
Identities = 31/70 (44%), Positives = 43/70 (61%)
Frame = +3
Query: 258 IAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFTVGGLTGVILANSSIDITLHDTY 437
+AVPTG+KIF + T+ G +I +GF+F F +GG+TGV L D + +Y
Sbjct: 329 VAVPTGVKIFNLIGTLWGGRILMRMPTYWLIGFIFNFLIGGITGVSLGMIPFDYQVTMSY 388
Query: 438 YVVAHFHYVL 467
YVVAHFH V+
Sbjct: 389 YVVAHFHNVM 398
Score = 47.6 bits (108), Expect = 3e-04
Identities = 27/94 (28%), Positives = 43/94 (45%)
Frame = +1
Query: 10 ILYQHLF*FFGHPEVYILILPGFGIISHIISQERGKKETFXXXXXXXXXXXXXXXXFIV* 189
+LYQ F F+ HP VY+++LP GI + + S +K F IV
Sbjct: 247 VLYQQFFWFYSHPAVYVMLLPYLGIGAEVAS-TMARKPLFGYRVMVYSMLAIVLVSCIVW 305
Query: 190 AHHIFTVGIDIDTRAYFTSATILLLYQQELKFLD 291
HH+F VGI + F +T+++ +K +
Sbjct: 306 LHHMFAVGIPEAWQIAFMISTLIVAVPTGVKIFN 339
>UniRef50_A7HEB5 Cluster: Cytochrome-c oxidase; n=2;
Cystobacterineae|Rep: Cytochrome-c oxidase -
Anaeromyxobacter sp. Fw109-5
Length = 596
Score = 64.5 bits (150), Expect = 2e-09
Identities = 28/71 (39%), Positives = 47/71 (66%)
Frame = +3
Query: 258 IAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFTVGGLTGVILANSSIDITLHDTY 437
I++P+ + + + T+ + Y+ +L LG VF+F VGGLTG+ L + S+D+ LHDT
Sbjct: 349 ISIPSMVVVVNWVLTLWQGSLRYDTPMLFALGTVFVFGVGGLTGLFLGDISMDLYLHDTM 408
Query: 438 YVVAHFHYVLS 470
+VV HFH+ ++
Sbjct: 409 FVVGHFHFTMA 419
Score = 50.0 bits (114), Expect = 5e-05
Identities = 20/31 (64%), Positives = 26/31 (83%)
Frame = +1
Query: 10 ILYQHLF*FFGHPEVYILILPGFGIISHIIS 102
IL+QHLF FGHPEVYI+ILP +GI+ ++S
Sbjct: 267 ILWQHLFWIFGHPEVYIMILPAWGILGDVLS 297
>UniRef50_Q1IUK7 Cluster: Cytochrome-c oxidase; n=2;
Acidobacteria|Rep: Cytochrome-c oxidase - Acidobacteria
bacterium (strain Ellin345)
Length = 595
Score = 63.7 bits (148), Expect = 4e-09
Identities = 29/70 (41%), Positives = 43/70 (61%)
Frame = +3
Query: 258 IAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFTVGGLTGVILANSSIDITLHDTY 437
I +P + L +++G+++ N L LGF+ +F GG++G LA SIDI LH TY
Sbjct: 359 ITIPATVLTLIWLGSLYGSRLRINSASLFALGFISMFVSGGVSGFFLAQPSIDIYLHATY 418
Query: 438 YVVAHFHYVL 467
+VV HFH V+
Sbjct: 419 FVVGHFHLVM 428
Score = 59.7 bits (138), Expect = 7e-08
Identities = 29/84 (34%), Positives = 45/84 (53%)
Frame = +1
Query: 10 ILYQHLF*FFGHPEVYILILPGFGIISHIISQERGKKETFXXXXXXXXXXXXXXXXFIV* 189
+L+QHLF FFGHPEVYI ILP GI+SHI+ ++ ++V
Sbjct: 277 LLWQHLFWFFGHPEVYIAILPAMGIVSHILINSM-RRPLLSHRVVIGSMISIGFLSYVVW 335
Query: 190 AHHIFTVGIDIDTRAYFTSATILL 261
HH+F G++ + F+ T+++
Sbjct: 336 GHHMFVSGMNPLSSLVFSFPTLII 359
>UniRef50_P11947 Cluster: Cytochrome c oxidase subunit 1; n=48;
Oligohymenophorea|Rep: Cytochrome c oxidase subunit 1 -
Tetrahymena pyriformis
Length = 698
Score = 63.7 bits (148), Expect = 4e-09
Identities = 35/110 (31%), Positives = 57/110 (51%)
Frame = +1
Query: 10 ILYQHLF*FFGHPEVYILILPGFGIISHIISQERGKKETFXXXXXXXXXXXXXXXXFIV* 189
IL QHLF FFGHPEVY+LI+P FG I+ I+ ++ ++V
Sbjct: 390 ILSQHLFWFFGHPEVYVLIIPTFGFINMIVPHNNTRR-VASKHHMIWAIYVMAYMGYLVW 448
Query: 190 AHHIFTVGIDIDTRAYFTSATILLLYQQELKFLDD*LQYMELKLIITLIF 339
HH++ VG+D +R +++ TI++ +K ++ L + L + L F
Sbjct: 449 GHHMYLVGLDHRSRTMYSTITIMISMPATIKVVNWTLSLVNGALKVDLPF 498
Score = 58.0 bits (134), Expect = 2e-07
Identities = 26/71 (36%), Positives = 45/71 (63%)
Frame = +3
Query: 258 IAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFTVGGLTGVILANSSIDITLHDTY 437
I++P IK+ ++ + + L + F+ LF V G TG+ L++ S+++++HDT+
Sbjct: 472 ISMPATIKVVNWTLSLVNGALKVDLPFLFSMSFLLLFLVAGFTGMWLSHVSLNVSMHDTF 531
Query: 438 YVVAHFHYVLS 470
YVVAHFH +LS
Sbjct: 532 YVVAHFHIMLS 542
>UniRef50_A4WT83 Cluster: Cytochrome c, monohaem; n=3;
Rhodobacteraceae|Rep: Cytochrome c, monohaem -
Rhodobacter sphaeroides ATCC 17025
Length = 878
Score = 63.3 bits (147), Expect = 5e-09
Identities = 29/70 (41%), Positives = 46/70 (65%)
Frame = +3
Query: 258 IAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFTVGGLTGVILANSSIDITLHDTY 437
+ +PTGI++F +AT+ ++ +L G + +FT GGLTGV++A + D +HDTY
Sbjct: 353 VVIPTGIQLFAFVATLMVGRVKMILPMLWIAGGLAVFTAGGLTGVMVAIAPFDWQVHDTY 412
Query: 438 YVVAHFHYVL 467
++VAH HY L
Sbjct: 413 FIVAHLHYTL 422
Score = 46.0 bits (104), Expect = 9e-04
Identities = 24/81 (29%), Positives = 40/81 (49%)
Frame = +1
Query: 10 ILYQHLF*FFGHPEVYILILPGFGIISHIISQERGKKETFXXXXXXXXXXXXXXXXFIV* 189
+L+QHLF FGHPEVYI+ LP + + I+ ++ F +
Sbjct: 271 LLWQHLFWIFGHPEVYIIFLPLIALAAMIV-PTAARQPIVGYSWIVLSAVGTGFLSFGLW 329
Query: 190 AHHIFTVGIDIDTRAYFTSAT 252
HH+FT G+ + +F++A+
Sbjct: 330 VHHMFTTGLPALSLGFFSAAS 350
Score = 35.5 bits (78), Expect = 1.2
Identities = 14/38 (36%), Positives = 23/38 (60%)
Frame = +2
Query: 497 GIY**YPLFTGLSLNSYILKIQFFTIFIGVNITFFPQH 610
G+Y YP+ T +L+ + + F+ +F G N+TF P H
Sbjct: 433 GVYYFYPVITKKALSERLGRWSFWLLFTGFNVTFLPMH 470
>UniRef50_Q5P1W4 Cluster: Cytochrome c oxidase, subunit I; n=13;
Bacteria|Rep: Cytochrome c oxidase, subunit I - Azoarcus
sp. (strain EbN1) (Aromatoleum aromaticum (strain EbN1))
Length = 607
Score = 62.5 bits (145), Expect = 9e-09
Identities = 31/74 (41%), Positives = 47/74 (63%), Gaps = 4/74 (5%)
Frame = +3
Query: 258 IAVPTGIKIFR*LATIHGTQINYNPNI----L*RLGFVFLFTVGGLTGVILANSSIDITL 425
+A+P+G+++F +AT + I L LGF+F+F +GGLTGV++A D
Sbjct: 396 VAIPSGMQVFAWIATFARGRATGRVRIATPTLFILGFLFIFVLGGLTGVMVAVIPFDWQA 455
Query: 426 HDTYYVVAHFHYVL 467
HD+Y++VAH HYVL
Sbjct: 456 HDSYFIVAHLHYVL 469
Score = 52.8 bits (121), Expect = 8e-06
Identities = 28/81 (34%), Positives = 42/81 (51%)
Frame = +1
Query: 10 ILYQHLF*FFGHPEVYILILPGFGIISHIISQERGKKETFXXXXXXXXXXXXXXXXFIV* 189
+L+QHLF FFGHPEVYI+ LP G++S I+ + F +
Sbjct: 314 LLWQHLFWFFGHPEVYIIFLPAAGMVSMIV-PTMARTPLVGYRFVVLALVGTAFLSFGLW 372
Query: 190 AHHIFTVGIDIDTRAYFTSAT 252
HH+FT GI + ++F +A+
Sbjct: 373 VHHMFTTGIPQLSLSFFQAAS 393
>UniRef50_A0TRU9 Cluster: Cytochrome-c oxidase; n=30;
Proteobacteria|Rep: Cytochrome-c oxidase - Burkholderia
cenocepacia MC0-3
Length = 1004
Score = 61.7 bits (143), Expect = 2e-08
Identities = 30/70 (42%), Positives = 44/70 (62%)
Frame = +3
Query: 258 IAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFTVGGLTGVILANSSIDITLHDTY 437
I++P+ + +F +ATI + + L GFV +F VGG++GV+ A +D L DTY
Sbjct: 347 ISIPSAVAVFAWIATIWTGRPVFRTPFLYFAGFVLMFVVGGVSGVMTAAVPLDWQLTDTY 406
Query: 438 YVVAHFHYVL 467
+VVAH HYVL
Sbjct: 407 FVVAHLHYVL 416
Score = 46.8 bits (106), Expect = 5e-04
Identities = 26/84 (30%), Positives = 41/84 (48%)
Frame = +1
Query: 10 ILYQHLF*FFGHPEVYILILPGFGIISHIISQERGKKETFXXXXXXXXXXXXXXXXFIV* 189
+L+QHLF F HP VY+++LP GI+S + ++ F V
Sbjct: 265 LLWQHLFWMFAHPWVYVVVLPAMGIVSDAL-PTFCRRPLVAYEAVAVSTVATMLIGFEVW 323
Query: 190 AHHIFTVGIDIDTRAYFTSATILL 261
HH+F GI A+F +A++L+
Sbjct: 324 VHHMFATGIAPLALAFFGAASMLI 347
Score = 37.5 bits (83), Expect = 0.30
Identities = 18/53 (33%), Positives = 27/53 (50%)
Frame = +2
Query: 512 YPLFTGLSLNSYILKIQFFTIFIGVNITFFPQHFFRV*PGYLDDISGYPRLIY 670
+P FTG +N K+ F+ + +G N+ FFP H + + G PR IY
Sbjct: 432 FPKFTGRMMNERFGKLTFWVVLVGFNLGFFPMH--------ISGLLGMPRRIY 476
>UniRef50_Q05FH1 Cluster: Cytochrome O ubiquinol oxidase subunit I;
n=1; Candidatus Carsonella ruddii PV|Rep: Cytochrome O
ubiquinol oxidase subunit I - Carsonella ruddii (strain
PV)
Length = 606
Score = 60.9 bits (141), Expect = 3e-08
Identities = 38/124 (30%), Positives = 65/124 (52%), Gaps = 2/124 (1%)
Frame = +3
Query: 258 IAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFTVGGLTGVILANSSIDITLHDTY 437
IA+PTG+KIF + TI + + + F+ +F++GG +GVIL+ ++D H++
Sbjct: 350 IAIPTGVKIFNWIFTILFSNFKKDILFFWFISFIIIFSIGGFSGVILSIPNLDFIFHNSM 409
Query: 438 YVVAHFHYVLSXXXXXXXXXXXXNDILYLQAFH*ILIY*KFNF--LQYLLE*I*HFFHNI 611
+++AHFH V+ + Y ++ + KFNF L +L+ I FF
Sbjct: 410 FLIAHFHSVIIGGVLFGYLSGI--SLWYNLIYNNCELNNKFNFNILFWLIGVILTFFPFY 467
Query: 612 FLGF 623
FLG+
Sbjct: 468 FLGY 471
Score = 56.8 bits (131), Expect = 5e-07
Identities = 33/95 (34%), Positives = 48/95 (50%)
Frame = +1
Query: 7 EILYQHLF*FFGHPEVYILILPGFGIISHIISQERGKKETFXXXXXXXXXXXXXXXXFIV 186
++LY +L +GHPEVYILILP FGI S IIS K F F+V
Sbjct: 267 QMLYINLIWAWGHPEVYILILPSFGIFSEIISY-ICVKSVFSYISLIYATISITVLSFLV 325
Query: 187 *AHHIFTVGIDIDTRAYFTSATILLLYQQELKFLD 291
HH FT+G + +F+ +T+++ +K +
Sbjct: 326 WLHHFFTMGSGYLSNIFFSISTMIIAIPTGVKIFN 360
>UniRef50_A3SJL2 Cluster: QoxA, Quinol oxidase subunit I; n=2;
Rhodobacteraceae|Rep: QoxA, Quinol oxidase subunit I -
Roseovarius nubinhibens ISM
Length = 818
Score = 60.9 bits (141), Expect = 3e-08
Identities = 29/70 (41%), Positives = 43/70 (61%)
Frame = +3
Query: 258 IAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFTVGGLTGVILANSSIDITLHDTY 437
+AVPT +++F + T+ + +L L F F +GGLTGV++A D +HDTY
Sbjct: 327 VAVPTAVQLFIWIGTLAKGAPRLHLPMLWLLAFFATFVIGGLTGVMVAIVPFDWQVHDTY 386
Query: 438 YVVAHFHYVL 467
++VAH HYVL
Sbjct: 387 FIVAHLHYVL 396
Score = 51.6 bits (118), Expect = 2e-05
Identities = 30/84 (35%), Positives = 42/84 (50%)
Frame = +1
Query: 10 ILYQHLF*FFGHPEVYILILPGFGIISHIISQERGKKETFXXXXXXXXXXXXXXXXFIV* 189
+L+QHLF FGHPEVYI+ LP G IS I+ + F +
Sbjct: 245 LLWQHLFWLFGHPEVYIIFLPAAGAISTIL-PVMARTGLLGYGWIVAAAVALGVLSFGLW 303
Query: 190 AHHIFTVGIDIDTRAYFTSATILL 261
HH+FT GI A+F++A+ L+
Sbjct: 304 VHHMFTTGIPHLGLAFFSAASTLV 327
>UniRef50_Q9Z605 Cluster: Quinol oxidase subunit I; n=15;
Proteobacteria|Rep: Quinol oxidase subunit I -
Rhodobacter sphaeroides (Rhodopseudomonas sphaeroides)
Length = 825
Score = 58.4 bits (135), Expect = 2e-07
Identities = 30/71 (42%), Positives = 45/71 (63%), Gaps = 1/71 (1%)
Frame = +3
Query: 258 IAVPTGIKIFR*LATI-HGTQINYNPNIL*RLGFVFLFTVGGLTGVILANSSIDITLHDT 434
+AVPT +++F + T+ GT P ++ L F F +GGLTGV++A D +HDT
Sbjct: 327 VAVPTAVQLFAWIGTLWRGTPEMRLP-MMWILAFFATFVIGGLTGVMVAVVPFDWQVHDT 385
Query: 435 YYVVAHFHYVL 467
+++VAH HYVL
Sbjct: 386 HFIVAHLHYVL 396
Score = 53.2 bits (122), Expect = 6e-06
Identities = 31/84 (36%), Positives = 42/84 (50%)
Frame = +1
Query: 10 ILYQHLF*FFGHPEVYILILPGFGIISHIISQERGKKETFXXXXXXXXXXXXXXXXFIV* 189
+L+QHLF FGHPEVYI+ LP G IS I+ + E F +
Sbjct: 245 LLWQHLFWLFGHPEVYIIFLPAAGAISTIL-PVMARTELIGYRWVVAAAISLAVLSFGLW 303
Query: 190 AHHIFTVGIDIDTRAYFTSATILL 261
HH+FT GI A F++A+ L+
Sbjct: 304 VHHMFTTGIPHMGLALFSAASTLV 327
>UniRef50_O86945 Cluster: Sub-unit I of an aa3-type cytochrome
oxidase; n=1; Acidithiobacillus ferrooxidans|Rep:
Sub-unit I of an aa3-type cytochrome oxidase -
Thiobacillus ferrooxidans (Acidithiobacillus
ferrooxidans)
Length = 627
Score = 58.0 bits (134), Expect = 2e-07
Identities = 26/67 (38%), Positives = 41/67 (61%)
Frame = +3
Query: 258 IAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFTVGGLTGVILANSSIDITLHDTY 437
+++PTG + TI G ++ N +L L + F +GGLTG+ A+ D+ LH+TY
Sbjct: 403 VSIPTGFIYLSAIGTIWGGRLRINAAVLLVLMAMMNFLIGGLTGIFNADVPADLQLHNTY 462
Query: 438 YVVAHFH 458
+V+AHFH
Sbjct: 463 WVIAHFH 469
Score = 35.1 bits (77), Expect = 1.6
Identities = 23/80 (28%), Positives = 29/80 (36%)
Frame = +1
Query: 4 HEILYQHLF*FFGHPEVYILILPGFGIISHIISQERGKKETFXXXXXXXXXXXXXXXXFI 183
H + Y F F HPEVY+ ILP F I I+ K+ F +
Sbjct: 320 HPLAYLDQFWFLFHPEVYVFILPAFAIWLEIL-PAAAKRPLFARGWAIAGLVGVSMSGAM 378
Query: 184 V*AHHIFTVGIDIDTRAYFT 243
HH FT D + T
Sbjct: 379 SGVHHYFTAVSDARMPIFMT 398
>UniRef50_Q5V018 Cluster: Cytochrome c oxidase subunit I; n=3;
Halobacteriaceae|Rep: Cytochrome c oxidase subunit I -
Haloarcula marismortui (Halobacterium marismortui)
Length = 854
Score = 57.2 bits (132), Expect = 4e-07
Identities = 26/70 (37%), Positives = 41/70 (58%)
Frame = +3
Query: 258 IAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFTVGGLTGVILANSSIDITLHDTY 437
I++P + +F + T+ ++ + L LG + LF +GG+TGV L +D TY
Sbjct: 333 ISLPFDLMVFSLIYTMAKGRVRFTTPFLFSLGALILFIIGGITGVFLGAIVLDYQFRGTY 392
Query: 438 YVVAHFHYVL 467
+VVAHFHYV+
Sbjct: 393 WVVAHFHYVM 402
Score = 54.4 bits (125), Expect = 2e-06
Identities = 26/82 (31%), Positives = 40/82 (48%)
Frame = +1
Query: 10 ILYQHLF*FFGHPEVYILILPGFGIISHIISQERGKKETFXXXXXXXXXXXXXXXXFIV* 189
+L+ HLF FFGHPEVYI+ P G+++ G++ F+V
Sbjct: 251 LLWAHLFWFFGHPEVYIVFFPALGVMAECFQTFTGRR-LVGRKWFIISMVLVALQSFVVW 309
Query: 190 AHHIFTVGIDIDTRAYFTSATI 255
HH+F GI++ + F + TI
Sbjct: 310 MHHMFLTGINLPIKTIFMATTI 331
Score = 36.7 bits (81), Expect = 0.53
Identities = 16/38 (42%), Positives = 22/38 (57%)
Frame = +2
Query: 491 YWGIY**YPLFTGLSLNSYILKIQFFTIFIGVNITFFP 604
+ G+Y YP TG N + KIQF F+G N+ +FP
Sbjct: 410 FGGLYYWYPKITGKMYNETLGKIQFGVYFLGFNLLYFP 447
>UniRef50_Q6KZG3 Cluster: Cytochrome c oxidase polypeptide I/III;
n=2; Thermoplasmatales|Rep: Cytochrome c oxidase
polypeptide I/III - Picrophilus torridus
Length = 841
Score = 55.2 bits (127), Expect = 1e-06
Identities = 27/70 (38%), Positives = 42/70 (60%)
Frame = +3
Query: 258 IAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFTVGGLTGVILANSSIDITLHDTY 437
I++PT + I +AT+ G + + IL L F +GG++GV ++ +ID +H Y
Sbjct: 340 ISIPTSMLIVGLIATMIGGRHKFQTPILFALAASTSFMIGGVSGVTQSSLAIDTIVHGDY 399
Query: 438 YVVAHFHYVL 467
YVVAHFHY +
Sbjct: 400 YVVAHFHYFM 409
Score = 41.9 bits (94), Expect = 0.014
Identities = 21/69 (30%), Positives = 34/69 (49%)
Frame = +1
Query: 10 ILYQHLF*FFGHPEVYILILPGFGIISHIISQERGKKETFXXXXXXXXXXXXXXXXFIV* 189
+++++LF +FGHPEVY+L+LPG G + +S + + +V
Sbjct: 258 LMWENLFWYFGHPEVYLLLLPGTGAMFDYLS-NLNHRPPYLKKWMIAAMGAISVDSVMVF 316
Query: 190 AHHIFTVGI 216
HH F GI
Sbjct: 317 LHHTFMTGI 325
>UniRef50_Q4FH11 Cluster: Cytochrome c oxidase subunit I; n=26;
Bilateria|Rep: Cytochrome c oxidase subunit I - Samia
cynthia ricini (Indian eri silkmoth)
Length = 510
Score = 50.4 bits (115), Expect = 4e-05
Identities = 40/125 (32%), Positives = 55/125 (44%), Gaps = 1/125 (0%)
Frame = +1
Query: 10 ILYQHLF*FFGHPEVYILILPGFGIISHIISQERGKKETFXXXXXXXXXXXXXXXXFIV* 189
ILYQHLF FFGHP++ + H++ ++ +K ++
Sbjct: 226 ILYQHLFWFFGHPKLMFSFSQDL-VSFHMLFPKKVEKSKLLVVSVSFMQSWLLVYSDLLF 284
Query: 190 AHHIFTVGID-IDTRAYFTSATILLLYQQELKFLDD*LQYMELKLIITLIFYED*VLYFY 366
++ + LLL Q LKFL D +MELKLI+ L FYED L FY
Sbjct: 285 ELIMYLPSESMLKLELVLHQQLSLLLSQLGLKFLVDWQPFMELKLIMVLQFYEDWDLCFY 344
Query: 367 SQ*ED 381
Q ED
Sbjct: 345 LQSED 349
>UniRef50_A0RZ19 Cluster: Heme/copper-type cytochrome/quinol
oxidase, subunit 1; n=2; Thermoprotei|Rep:
Heme/copper-type cytochrome/quinol oxidase, subunit 1 -
Cenarchaeum symbiosum
Length = 508
Score = 50.4 bits (115), Expect = 4e-05
Identities = 25/67 (37%), Positives = 40/67 (59%), Gaps = 1/67 (1%)
Frame = +3
Query: 261 AVP-TGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFTVGGLTGVILANSSIDITLHDTY 437
AVP + + +F +AT+ +I ++ ++ +G + LF G GV+ A +D T HDTY
Sbjct: 313 AVPASAMHVFNFVATMWNGRIRFDSPMMWSIGGIALFFSAGAGGVLNAAMPLDFTTHDTY 372
Query: 438 YVVAHFH 458
+VV HFH
Sbjct: 373 WVVGHFH 379
Score = 45.6 bits (103), Expect = 0.001
Identities = 23/82 (28%), Positives = 37/82 (45%)
Frame = +1
Query: 10 ILYQHLF*FFGHPEVYILILPGFGIISHIISQERGKKETFXXXXXXXXXXXXXXXXFIV* 189
I Y HLF F HPEVY+L++P G++ ++ + +K + F
Sbjct: 231 IAYAHLFWFTFHPEVYVLVIPAIGMMYEMVPR-FSRKPIYSYNSGLFAFVLLTIVGFSSW 289
Query: 190 AHHIFTVGIDIDTRAYFTSATI 255
AHH+F G+ + F T+
Sbjct: 290 AHHMFATGMSFTEKTVFMLGTL 311
>UniRef50_Q9MFX8 Cluster: Cytochrome oxidase I; n=5; Echinometra
lucunter|Rep: Cytochrome oxidase I - Echinometra
lucunter
Length = 199
Score = 46.0 bits (104), Expect = 9e-04
Identities = 23/62 (37%), Positives = 31/62 (50%)
Frame = +3
Query: 21 TFILIFWTS*SLYFNFTRIWYNFSYYFTRKRKKRNFWLFRNNLCYTSNWVIRIYCLSSSY 200
T ILI W S+Y F IW +F+ T FW+ N L + SNW I C+S +
Sbjct: 1 TPILILWPPSSIYSYFAGIWNDFARNRTLFSNASTFWVPGNGLRHDSNWSPSIPCMSPPH 60
Query: 201 IH 206
+H
Sbjct: 61 VH 62
>UniRef50_Q8LX68 Cluster: Cytochrome oxidase I; n=2; Chaoborus|Rep:
Cytochrome oxidase I - Chaoborus pallidus
Length = 206
Score = 45.2 bits (102), Expect = 0.002
Identities = 32/120 (26%), Positives = 41/120 (34%)
Frame = +2
Query: 257 YCCTNRN*NF*MTSYNTWNSN*L*P*YFMKIRFCIFIHSRRINRCNFSQFFXXXXXXXXX 436
YC N NF MT Y +W++N L P + FC FI+ N +FSQF
Sbjct: 15 YCHPYSNLNFLMTCYPSWDTNLLHPSPPLSFSFCFFIYRWSFNSGSFSQFLNWYYSTWYL 74
Query: 437 XXXXXXXXXXXXXXXXCNYWGIY**YPLFTGLSLNSYILKIQFFTIFIGVNITFFPQHFF 616
CNY IY P S ++K + F FF
Sbjct: 75 LCCSSFPLRSFNSSSICNYISIYPLMPPLNWTFYKSKMIKNSIYNNIYSSKSNIFSPTFF 134
>UniRef50_Q8LX82 Cluster: Cytochrome c oxidase subunit I; n=3;
Chaoborus|Rep: Cytochrome c oxidase subunit I -
Chaoborus obscuripes
Length = 206
Score = 42.3 bits (95), Expect = 0.011
Identities = 37/133 (27%), Positives = 52/133 (39%), Gaps = 1/133 (0%)
Frame = +1
Query: 220 IDTRAYFTSATILLLYQQELKFLDD*LQYM-ELKLIITLIFYED*VLYFYSQ*ED*QV*F 396
+DTRAYFTSAT+++ +K + L ++ + + F ED Q F
Sbjct: 2 VDTRAYFTSATMIIAVPTGIKIFSWLATFTWNSNLFFSITYMGISICIFIHLLEDLQELF 61
Query: 397 *PXXXXXXXXXXXXXXXXXXXXXXQ*EQYLQLLGDLLMISFIYRPFIKFLYTKNSIFYNI 576
+ +G ++ I K L KNSIFYNI
Sbjct: 62 LLILLLMLFYMTLIMLCSFSLCFIYSSCFCNYIGIYSLMPLINSTNNKSLMIKNSIFYNI 121
Query: 577 YWSKYNIFSTTFF 615
+ K IFSTTFF
Sbjct: 122 FSGKSYIFSTTFF 134
Score = 35.1 bits (77), Expect = 1.6
Identities = 29/104 (27%), Positives = 36/104 (34%), Gaps = 1/104 (0%)
Frame = +2
Query: 305 TWNSN*L*P*YFMKIRFCIFIHSRRINRCNFSQFFXXXXXXXXXXXXXXXXXXXXXXXXX 484
TWNSN +M I CIFIH + F
Sbjct: 31 TWNSNLFFSITYMGISICIFIHLLEDLQELFLLILLLMLFYMTLIMLCSFSLCFIYSSCF 90
Query: 485 CNYWGIY**YPLFTGLSLNSYILKIQ-FFTIFIGVNITFFPQHF 613
CNY GIY PL + S ++K F+ IF G + F F
Sbjct: 91 CNYIGIYSLMPLINSTNNKSLMIKNSIFYNIFSGKSYIFSTTFF 134
>UniRef50_Q30DC3 Cluster: Cytochrome c oxidase subunit I; n=30;
Panarthropoda|Rep: Cytochrome c oxidase subunit I -
Pagyris cymothoe
Length = 487
Score = 42.3 bits (95), Expect = 0.011
Identities = 18/19 (94%), Positives = 18/19 (94%)
Frame = +1
Query: 10 ILYQHLF*FFGHPEVYILI 66
ILYQHLF FFGHPEVYILI
Sbjct: 202 ILYQHLFWFFGHPEVYILI 220
>UniRef50_O67937 Cluster: Cytochrome c oxidase subunit I; n=1;
Aquifex aeolicus|Rep: Cytochrome c oxidase subunit I -
Aquifex aeolicus
Length = 592
Score = 41.5 bits (93), Expect = 0.019
Identities = 14/32 (43%), Positives = 25/32 (78%)
Frame = +3
Query: 363 LFTVGGLTGVILANSSIDITLHDTYYVVAHFH 458
LF +GG+TG++ A+ ++++ +H+T YV HFH
Sbjct: 354 LFFIGGITGIVNASYNVNLVVHNTAYVPGHFH 385
>UniRef50_Q5VI63 Cluster: SoxB; n=3; Sulfolobaceae|Rep: SoxB -
Acidianus brierleyi
Length = 148
Score = 40.7 bits (91), Expect = 0.033
Identities = 22/76 (28%), Positives = 35/76 (46%)
Frame = +1
Query: 34 FFGHPEVYILILPGFGIISHIISQERGKKETFXXXXXXXXXXXXXXXXFIV*AHHIFTVG 213
FFGHP VY + P FG + + I K+ F ++ HH+ T
Sbjct: 2 FFGHPVVYYVPFPLFGALYYYI-PIYAKRSLFSEKWARWNIFLLAIGSMLIWVHHLQTFP 60
Query: 214 IDIDTRAYFTSATILL 261
+ +D RA+ T +T++L
Sbjct: 61 LPVDLRAWITVSTLVL 76
Score = 39.1 bits (87), Expect = 0.099
Identities = 19/45 (42%), Positives = 28/45 (62%), Gaps = 5/45 (11%)
Frame = +3
Query: 348 LGFVFL-----FTVGGLTGVILANSSIDITLHDTYYVVAHFHYVL 467
LG FL F +GG+ + L + I+ +H+TYYVV HFHY++
Sbjct: 103 LGMTFLIALIGFIIGGVQALPLPINIINGVVHNTYYVVGHFHYMV 147
>UniRef50_Q9YBH5 Cluster: Cytochrome c oxidase (Ba3-type) subunit I;
n=1; Aeropyrum pernix|Rep: Cytochrome c oxidase
(Ba3-type) subunit I - Aeropyrum pernix
Length = 548
Score = 39.5 bits (88), Expect = 0.075
Identities = 14/34 (41%), Positives = 24/34 (70%)
Frame = +3
Query: 357 VFLFTVGGLTGVILANSSIDITLHDTYYVVAHFH 458
+ LF GG+TG+I A+ ++ +H+T ++V HFH
Sbjct: 340 IILFANGGITGIINASFQLNTVVHNTTWIVGHFH 373
>UniRef50_A3H8Y4 Cluster: Cytochrome-c oxidase precursor; n=1;
Caldivirga maquilingensis IC-167|Rep: Cytochrome-c
oxidase precursor - Caldivirga maquilingensis IC-167
Length = 529
Score = 39.1 bits (87), Expect = 0.099
Identities = 21/67 (31%), Positives = 37/67 (55%)
Frame = +3
Query: 258 IAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFTVGGLTGVILANSSIDITLHDTY 437
I++ + + +F LA + + I P + L +F + G +GV A + ++ LH+T
Sbjct: 336 ISIVSAVSVFALLAMMWRSGIKMTPPYMFSLIAMFAWLEAGYSGVAQAIVAWNLYLHNTL 395
Query: 438 YVVAHFH 458
+VVAHFH
Sbjct: 396 WVVAHFH 402
>UniRef50_Q8SK39 Cluster: Cytochrome c oxidase subunit I; n=455;
cellular organisms|Rep: Cytochrome c oxidase subunit I -
Pandaka lidwilli
Length = 507
Score = 37.9 bits (84), Expect = 0.23
Identities = 18/35 (51%), Positives = 22/35 (62%)
Frame = +2
Query: 554 KIQFFTIFIGVNITFFPQHFFRV*PGYLDDISGYP 658
KI F +F+GVN+TFFPQHF + G S YP
Sbjct: 400 KIHFGVMFVGVNLTFFPQHFLGL-AGMPRRYSDYP 433
>UniRef50_Q8ZXC1 Cluster: Cytochrome C oxidase subunit I; n=3;
Pyrobaculum|Rep: Cytochrome C oxidase subunit I -
Pyrobaculum aerophilum
Length = 557
Score = 37.5 bits (83), Expect = 0.30
Identities = 13/34 (38%), Positives = 24/34 (70%)
Frame = +3
Query: 357 VFLFTVGGLTGVILANSSIDITLHDTYYVVAHFH 458
+ LF + G +GV+ A+ +++ +H+T +VV HFH
Sbjct: 340 IILFGIAGFSGVVNASFNVNYNVHNTAWVVGHFH 373
>UniRef50_Q396U4 Cluster: Cytochrome c oxidase, subunit I; n=18;
Proteobacteria|Rep: Cytochrome c oxidase, subunit I -
Burkholderia sp. (strain 383) (Burkholderia cepacia
(strain ATCC 17760/ NCIB 9086 / R18194))
Length = 541
Score = 36.3 bits (80), Expect = 0.70
Identities = 17/49 (34%), Positives = 28/49 (57%), Gaps = 1/49 (2%)
Frame = +3
Query: 327 NPNIL*RLGFVFLFT-VGGLTGVILANSSIDITLHDTYYVVAHFHYVLS 470
NP +L L F F+ GG G+I + +D T+H+T ++ HFH + +
Sbjct: 325 NPQML-ALAFSFVMLGFGGAGGLINMSYQLDTTIHNTQWITGHFHLIFA 372
>UniRef50_Q2W549 Cluster: Heme/copper-type cytochrome/quinol
oxidase, subunit 1; n=3; Magnetospirillum|Rep:
Heme/copper-type cytochrome/quinol oxidase, subunit 1 -
Magnetospirillum magneticum (strain AMB-1 / ATCC 700264)
Length = 560
Score = 36.3 bits (80), Expect = 0.70
Identities = 14/37 (37%), Positives = 22/37 (59%)
Frame = +3
Query: 348 LGFVFLFTVGGLTGVILANSSIDITLHDTYYVVAHFH 458
L + +GG++GV + I+I +H+T YV HFH
Sbjct: 351 LSLILFGFLGGISGVTMGVEQINIMIHNTIYVPGHFH 387
>UniRef50_Q28SZ6 Cluster: Cytochrome c oxidase subunit I; n=1;
Jannaschia sp. CCS1|Rep: Cytochrome c oxidase subunit I
- Jannaschia sp. (strain CCS1)
Length = 155
Score = 36.3 bits (80), Expect = 0.70
Identities = 14/25 (56%), Positives = 17/25 (68%)
Frame = +3
Query: 390 VILANSSIDITLHDTYYVVAHFHYV 464
+ L+ D T HDTYYVVAH HY+
Sbjct: 29 IALSQPGADGTYHDTYYVVAHIHYL 53
>UniRef50_Q981A5 Cluster: Heme bearing subunit I of the terminal
oxidase; n=8; Sulfolobaceae|Rep: Heme bearing subunit I
of the terminal oxidase - Sulfolobus solfataricus
Length = 593
Score = 36.3 bits (80), Expect = 0.70
Identities = 19/70 (27%), Positives = 33/70 (47%)
Frame = +3
Query: 258 IAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFTVGGLTGVILANSSIDITLHDTY 437
+ +P+ + F AT G + +N + G+TG+ A S D +H+T
Sbjct: 319 VVIPSMMTFFNLWATAKGADVKWNIITAWTVTSFAGAIAAGVTGISNATISFDAIVHNTD 378
Query: 438 YVVAHFHYVL 467
+VV HFH ++
Sbjct: 379 WVVGHFHAMI 388
>UniRef50_Q3INR3 Cluster: Cytochrome-c-like terminal oxidase,
subunit I 3; n=1; Natronomonas pharaonis DSM 2160|Rep:
Cytochrome-c-like terminal oxidase, subunit I 3 -
Natronomonas pharaonis (strain DSM 2160 / ATCC 35678)
Length = 575
Score = 36.3 bits (80), Expect = 0.70
Identities = 12/29 (41%), Positives = 21/29 (72%)
Frame = +3
Query: 372 VGGLTGVILANSSIDITLHDTYYVVAHFH 458
+GG+TGV++ +++T H+T+ V HFH
Sbjct: 371 MGGITGVLMGQLQLNMTWHNTFATVGHFH 399
>UniRef50_P98004 Cluster: Quinol oxidase subunit 1 (EC 1.10.3.-)
(Quinol oxidase polypeptide I) (Cytochrome aa3 subunit
1) (Oxidase aa(3) subunit 1); n=5; Sulfolobaceae|Rep:
Quinol oxidase subunit 1 (EC 1.10.3.-) (Quinol oxidase
polypeptide I) (Cytochrome aa3 subunit 1) (Oxidase aa(3)
subunit 1) - Sulfolobus acidocaldarius
Length = 517
Score = 35.9 bits (79), Expect = 0.93
Identities = 23/86 (26%), Positives = 38/86 (44%)
Frame = +1
Query: 4 HEILYQHLF*FFGHPEVYILILPGFGIISHIISQERGKKETFXXXXXXXXXXXXXXXXFI 183
+ +L+ LF F+GHP VY + P FG + + I Q G + +
Sbjct: 222 NNLLWAILFWFYGHPVVYYVPFPLFGALYYYIPQYAG-RSLYSEKWARWNIYLLAIGTMG 280
Query: 184 V*AHHIFTVGIDIDTRAYFTSATILL 261
V HH+ T + I R + +T++L
Sbjct: 281 VWVHHLQTWPLPIVLREWVNLSTLIL 306
Score = 35.9 bits (79), Expect = 0.93
Identities = 13/34 (38%), Positives = 22/34 (64%)
Frame = +3
Query: 366 FTVGGLTGVILANSSIDITLHDTYYVVAHFHYVL 467
F + G ++L +SI+ H++YYVV HFH ++
Sbjct: 344 FILAGAQALVLPENSINPLFHNSYYVVGHFHLMI 377
>UniRef50_Q604Y9 Cluster: Cytochrome c oxidase, subunit I; n=1;
Methylococcus capsulatus|Rep: Cytochrome c oxidase,
subunit I - Methylococcus capsulatus
Length = 537
Score = 35.5 bits (78), Expect = 1.2
Identities = 13/48 (27%), Positives = 29/48 (60%)
Frame = +3
Query: 327 NPNIL*RLGFVFLFTVGGLTGVILANSSIDITLHDTYYVVAHFHYVLS 470
NP +L + + + +GG G++ A+ +++ +H+T +V HFH + +
Sbjct: 327 NPMVLAAILSLLMLVLGGFGGIVNASYAMNAMVHNTAWVPGHFHLIFA 374
>UniRef50_Q2VQT0 Cluster: Heme-copper oxygen reductase; n=1;
Rhodothermus marinus|Rep: Heme-copper oxygen reductase -
Rhodothermus marinus (Rhodothermus obamensis)
Length = 561
Score = 35.5 bits (78), Expect = 1.2
Identities = 15/44 (34%), Positives = 29/44 (65%)
Frame = +3
Query: 327 NPNIL*RLGFVFLFTVGGLTGVILANSSIDITLHDTYYVVAHFH 458
+P++ +L + F GG+TG+I A+ +++ +H+T +V HFH
Sbjct: 346 DPSLSAQLLAMITFVFGGITGLINASFTMNQVVHNTTWVPGHFH 389
>UniRef50_Q9TCU2 Cluster: Cytochrome c oxidase subunit I; n=1;
Taenia saginata|Rep: Cytochrome c oxidase subunit I -
Taenia saginata (Beef tapeworm)
Length = 147
Score = 35.5 bits (78), Expect = 1.2
Identities = 11/23 (47%), Positives = 20/23 (86%)
Frame = +1
Query: 193 HHIFTVGIDIDTRAYFTSATILL 261
HH+FTVG+D++T +F+S T+++
Sbjct: 53 HHMFTVGLDVNTAVFFSSVTMII 75
>UniRef50_A2T428 Cluster: Putative uncharacterized protein ORF820;
n=1; Placozoan sp. BZ49|Rep: Putative uncharacterized
protein ORF820 - Placozoan sp. BZ49
Length = 820
Score = 35.5 bits (78), Expect = 1.2
Identities = 13/28 (46%), Positives = 22/28 (78%)
Frame = +1
Query: 199 IFTVGIDIDTRAYFTSATILLLYQQELK 282
++ VG+D+DTRAYFT+AT+++ +K
Sbjct: 1 MYVVGMDVDTRAYFTAATMIIAVPTGIK 28
>UniRef50_Q2Y5N3 Cluster: Integral membrane proteins containing
uncharacterized repeats-like precursor; n=3;
Nitrosospira multiformis ATCC 25196|Rep: Integral
membrane proteins containing uncharacterized
repeats-like precursor - Nitrosospira multiformis
(strain ATCC 25196 / NCIMB 11849)
Length = 433
Score = 34.7 bits (76), Expect = 2.1
Identities = 13/25 (52%), Positives = 18/25 (72%)
Frame = +1
Query: 46 PEVYILILPGFGIISHIISQERGKK 120
PE+Y LILPG G++ I Q++ KK
Sbjct: 407 PEIYALILPGLGLVGFIARQKKAKK 431
>UniRef50_A5URU0 Cluster: Cytochrome c oxidase, subunit I; n=4;
Chloroflexaceae|Rep: Cytochrome c oxidase, subunit I -
Roseiflexus sp. RS-1
Length = 561
Score = 34.7 bits (76), Expect = 2.1
Identities = 13/34 (38%), Positives = 23/34 (67%)
Frame = +3
Query: 357 VFLFTVGGLTGVILANSSIDITLHDTYYVVAHFH 458
+ LF GG G+I A+ +I++ +H+T ++ HFH
Sbjct: 359 MILFAFGGAGGLINASYNINLVVHNTSWISGHFH 392
>UniRef50_A7D123 Cluster: Cytochrome-c oxidase; n=1; Halorubrum
lacusprofundi ATCC 49239|Rep: Cytochrome-c oxidase -
Halorubrum lacusprofundi ATCC 49239
Length = 597
Score = 34.7 bits (76), Expect = 2.1
Identities = 12/32 (37%), Positives = 21/32 (65%)
Frame = +3
Query: 363 LFTVGGLTGVILANSSIDITLHDTYYVVAHFH 458
+F GG +G++ A +I+ +H+T +V HFH
Sbjct: 358 MFAAGGFSGMVNAGMNINYMIHNTIWVPGHFH 389
>UniRef50_Q9KEW0 Cluster: Cytochrome c oxidase subunit I; n=8;
Bacillaceae|Rep: Cytochrome c oxidase subunit I -
Bacillus halodurans
Length = 564
Score = 34.3 bits (75), Expect = 2.8
Identities = 13/34 (38%), Positives = 22/34 (64%)
Frame = +3
Query: 357 VFLFTVGGLTGVILANSSIDITLHDTYYVVAHFH 458
+ F GG+ G+I A+ ++ +H+T +VV HFH
Sbjct: 353 MLFFIPGGIGGIINASFQLNEVVHNTLWVVGHFH 386
>UniRef50_Q6RCN4 Cluster: Cytochrome c oxidase subunit I; n=1;
Bucephalid sp. KH-2004|Rep: Cytochrome c oxidase subunit
I - Bucephalid sp. KH-2004
Length = 121
Score = 34.3 bits (75), Expect = 2.8
Identities = 20/45 (44%), Positives = 28/45 (62%), Gaps = 1/45 (2%)
Frame = +3
Query: 258 IAVPTGIKIFR*LATIHGTQINYNPNIL*RL-GFVFLFTVGGLTG 389
I VPTGIK+F L + ++ N I+ + GF+FLFT+GG G
Sbjct: 52 IGVPTGIKVFGWLYMLGTSRHCLNTVIVWWIIGFIFLFTMGGRQG 96
>UniRef50_A6EJR8 Cluster: Transcriptional regulator, AraC family
protein; n=1; Pedobacter sp. BAL39|Rep: Transcriptional
regulator, AraC family protein - Pedobacter sp. BAL39
Length = 278
Score = 33.5 bits (73), Expect = 4.9
Identities = 20/63 (31%), Positives = 35/63 (55%), Gaps = 2/63 (3%)
Frame = +1
Query: 481 YLQLLGDL--LMISFIYRPFIKFLYTKNSIFYNIYWSKYNIFSTTFF*GLAGIPRRYFRI 654
YL+ GDL L+ + Y+PF+K ++ KN I + +Y++ + F AG +Y++
Sbjct: 14 YLEFSGDLPGLLAQYDYQPFVKVVFVKNGGKVVIDFQEYSLTKDSVFFINAG---QYYQF 70
Query: 655 SQT 663
QT
Sbjct: 71 GQT 73
>UniRef50_O07289 Cluster: Subunit I-homologue of cytochrome oxidase;
n=6; cellular organisms|Rep: Subunit I-homologue of
cytochrome oxidase - Natronomonas pharaonis
(Natronobacterium pharaonis)
Length = 581
Score = 33.1 bits (72), Expect = 6.5
Identities = 11/32 (34%), Positives = 21/32 (65%)
Frame = +3
Query: 363 LFTVGGLTGVILANSSIDITLHDTYYVVAHFH 458
+F +G++ A +I+ +H+T++VV HFH
Sbjct: 350 MFAAAAFSGMVNAGMNINYLVHNTWWVVGHFH 381
>UniRef50_Q5CTJ9 Cluster: Cation-transporting ATPase; n=2;
Cryptosporidium|Rep: Cation-transporting ATPase -
Cryptosporidium parvum Iowa II
Length = 1434
Score = 32.7 bits (71), Expect = 8.6
Identities = 18/63 (28%), Positives = 30/63 (47%), Gaps = 2/63 (3%)
Frame = +3
Query: 24 FILIFWT--S*SLYFNFTRIWYNFSYYFTRKRKKRNFWLFRNNLCYTSNWVIRIYCLSSS 197
+I+ FW+ S SLYFN + N + T KK N L + +C+ + + S +
Sbjct: 558 YIIPFWSTSSMSLYFNNAIKYLNSEHILTTNPKKLNQLLLVDTICFDKTGTLTVPTFSIN 617
Query: 198 YIH 206
+H
Sbjct: 618 NVH 620
>UniRef50_Q56408 Cluster: Cytochrome c oxidase subunit 1 (EC
1.9.3.1) (Cytochrome c oxidase polypeptide I)
(Cytochrome c ba(3) subunit I); n=4; Deinococci|Rep:
Cytochrome c oxidase subunit 1 (EC 1.9.3.1) (Cytochrome
c oxidase polypeptide I) (Cytochrome c ba(3) subunit I)
- Thermus thermophilus
Length = 108
Score = 32.7 bits (71), Expect = 8.6
Identities = 12/31 (38%), Positives = 20/31 (64%)
Frame = +3
Query: 366 FTVGGLTGVILANSSIDITLHDTYYVVAHFH 458
F GG G++ A+ ++D +H+T +V HFH
Sbjct: 21 FIPGGAGGIVNASFTLDYVVHNTAWVPGHFH 51
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 510,931,710
Number of Sequences: 1657284
Number of extensions: 8420678
Number of successful extensions: 19983
Number of sequences better than 10.0: 114
Number of HSP's better than 10.0 without gapping: 19064
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 19877
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 53719013270
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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