Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= prgv0274
(687 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q6TP93 Cluster: Cytochrome c oxidase subunit I; n=2; Br... 119 6e-26
UniRef50_Q9MIY8 Cluster: Cytochrome c oxidase subunit 1; n=861; ... 109 6e-23
UniRef50_Q5GGF4 Cluster: Cytochrome c oxidase subunit I; n=2742;... 107 3e-22
UniRef50_Q9MCX7 Cluster: Cytochrome c oxidase subunit I; n=181; ... 106 4e-22
UniRef50_Q6ZLV6 Cluster: Cytochrome c oxidase subunit I; n=941; ... 106 6e-22
UniRef50_Q951H1 Cluster: Cytochrome c oxidase subunit I; n=388; ... 105 1e-21
UniRef50_P00395 Cluster: Cytochrome c oxidase subunit 1; n=44498... 105 1e-21
UniRef50_P29649 Cluster: Cytochrome c oxidase subunit 1; n=441; ... 98 2e-19
UniRef50_A7UG06 Cluster: Cytochrome oxidase subunits 1 and 2 pol... 92 1e-17
UniRef50_Q85HI4 Cluster: Cytochrome c oxidase subunit I; n=7; Ec... 91 2e-17
UniRef50_P48866 Cluster: Cytochrome c oxidase subunit 1; n=179; ... 91 2e-17
UniRef50_Q1NET5 Cluster: Cytochrome-c oxidase; n=3; Alphaproteob... 89 7e-17
UniRef50_A2T435 Cluster: Cytochrome c oxidase subunit I; n=126; ... 89 1e-16
UniRef50_Q8LX70 Cluster: Cytochrome c oxidase subunit I; n=4; Ch... 88 2e-16
UniRef50_Q1XA94 Cluster: Cytochrome c oxidase subunit I; n=825; ... 87 4e-16
UniRef50_Q6XYE8 Cluster: Cytochrome c oxidase subunit I; n=2; En... 86 9e-16
UniRef50_O47573 Cluster: Cytochrome c oxidase subunit I; n=42; N... 84 4e-15
UniRef50_P60620 Cluster: Cytochrome c oxidase subunit 1; n=2931;... 83 8e-15
UniRef50_Q9B8X8 Cluster: Cytochrome c oxidase subunit I; n=517; ... 81 2e-14
UniRef50_Q5W914 Cluster: Cytochrome c oxidase subunit I; n=9; Co... 81 3e-14
UniRef50_Q9G8S1 Cluster: Cytochrome c oxidase subunit 1; n=1; Na... 80 4e-14
UniRef50_Q9MLW1 Cluster: Cytochrome c oxidase subunit I; n=5; Na... 79 1e-13
UniRef50_Q7YEU6 Cluster: Endonuclease; n=4; Fungi/Metazoa group|... 75 2e-12
UniRef50_Q8SHP5 Cluster: Cytochrome c oxidase subunit I; n=15; F... 75 2e-12
UniRef50_Q0H8Y3 Cluster: Probable intron-encoded endonuclease aI... 74 3e-12
UniRef50_Q8LX74 Cluster: Cytochrome c oxidase subunit I; n=1; Ch... 73 5e-12
UniRef50_Q28SZ5 Cluster: Cytochrome-c oxidase; n=50; cellular or... 73 7e-12
UniRef50_Q1H1C1 Cluster: Cytochrome-c oxidase; n=1; Methylobacil... 73 9e-12
UniRef50_A7BSH8 Cluster: Cytochrome c oxidase aa3, subunit 1; n=... 72 2e-11
UniRef50_Q9XLV8 Cluster: Cytochrome c oxidase subunit I; n=1; Di... 71 3e-11
UniRef50_Q11EK8 Cluster: Cytochrome c oxidase, subunit I; n=5; P... 71 4e-11
UniRef50_A1ZL77 Cluster: Alternative Cytochrome c oxidase polype... 71 4e-11
UniRef50_Q6ED53 Cluster: Cox1-i5 protein; n=2; Candida stellata|... 69 1e-10
UniRef50_Q18JR5 Cluster: Cytochrome-c-like terminal oxidase, sub... 69 1e-10
UniRef50_P98000 Cluster: Alternative cytochrome c oxidase subuni... 69 1e-10
UniRef50_Q06473 Cluster: Cytochrome c oxidase subunit 1 (EC 1.9.... 69 1e-10
UniRef50_Q9TAP9 Cluster: Cytochrome c oxidase subunit I; n=2; To... 69 1e-10
UniRef50_Q98P35 Cluster: Cytochrome C oxidase subunit I; n=16; c... 67 4e-10
UniRef50_A3ZTG1 Cluster: Cytochrome c oxidase subunit I; n=1; Bl... 67 4e-10
UniRef50_Q4XXN6 Cluster: Putative uncharacterized protein; n=1; ... 67 4e-10
UniRef50_Q02766 Cluster: Cytochrome c oxidase subunit 1; n=107; ... 67 4e-10
UniRef50_Q1IUK7 Cluster: Cytochrome-c oxidase; n=2; Acidobacteri... 66 8e-10
UniRef50_Q9ZZX1 Cluster: Intron-encoded DNA endonuclease aI5 alp... 66 1e-09
UniRef50_A0TRU9 Cluster: Cytochrome-c oxidase; n=30; Proteobacte... 65 1e-09
UniRef50_Q9XKD7 Cluster: Cytochrome c oxidase subunit I; n=1; Di... 65 1e-09
UniRef50_P33518 Cluster: Cytochrome c oxidase polypeptide 1; n=4... 64 2e-09
UniRef50_A6C0L1 Cluster: Cytochrome c oxidase subunit I; n=1; Pl... 64 3e-09
UniRef50_P24010 Cluster: Cytochrome c oxidase subunit 1 (EC 1.9.... 64 3e-09
UniRef50_O67935 Cluster: Cytochrome c oxidase subunit I; n=1; Aq... 64 4e-09
UniRef50_A7HEB5 Cluster: Cytochrome-c oxidase; n=2; Cystobacteri... 64 4e-09
UniRef50_A0VUI8 Cluster: Cytochrome-c oxidase; n=1; Dinoroseobac... 64 4e-09
UniRef50_P14544 Cluster: Cytochrome c oxidase subunit 1; n=7; Eu... 64 4e-09
UniRef50_Q8SK39 Cluster: Cytochrome c oxidase subunit I; n=455; ... 63 7e-09
UniRef50_P98005 Cluster: Cytochrome c oxidase polypeptide I+III ... 62 1e-08
UniRef50_Q79VD7 Cluster: Cytochrome c oxidase subunit 1; n=93; A... 61 2e-08
UniRef50_A6C5X9 Cluster: Cytochrome caa3 oxidase; n=3; Bacteria|... 61 3e-08
UniRef50_A5UVJ0 Cluster: Cytochrome-c oxidase; n=2; Roseiflexus|... 60 4e-08
UniRef50_Q36097 Cluster: Cytochrome c oxidase subunit 1; n=3; Th... 60 4e-08
UniRef50_P34956 Cluster: Quinol oxidase subunit 1 (EC 1.10.3.-) ... 60 5e-08
UniRef50_Q67ML1 Cluster: Cytochrome C oxidase subunit I; n=17; B... 59 1e-07
UniRef50_Q5V018 Cluster: Cytochrome c oxidase subunit I; n=3; Ha... 59 1e-07
UniRef50_Q0I8U1 Cluster: Cytochrome c oxidase subunit I; n=16; B... 58 2e-07
UniRef50_A4WT83 Cluster: Cytochrome c, monohaem; n=3; Rhodobacte... 58 2e-07
UniRef50_A7H8L4 Cluster: Cytochrome c oxidase subunit I type; n=... 57 4e-07
UniRef50_Q5P1W4 Cluster: Cytochrome c oxidase, subunit I; n=13; ... 57 5e-07
UniRef50_Q9TCU2 Cluster: Cytochrome c oxidase subunit I; n=1; Ta... 57 5e-07
UniRef50_Q34463 Cluster: Cytochrome oxidase subunit I; n=3; Eugl... 56 6e-07
UniRef50_Q1CZF1 Cluster: Cytochrome c oxidase, subunit I; n=1; M... 56 8e-07
UniRef50_Q0AI64 Cluster: Cytochrome-c oxidase; n=3; Proteobacter... 55 2e-06
UniRef50_A2T428 Cluster: Putative uncharacterized protein ORF820... 55 2e-06
UniRef50_A0RZ19 Cluster: Heme/copper-type cytochrome/quinol oxid... 54 2e-06
UniRef50_P11947 Cluster: Cytochrome c oxidase subunit 1; n=48; O... 54 2e-06
UniRef50_A3SJL2 Cluster: QoxA, Quinol oxidase subunit I; n=2; Rh... 54 3e-06
UniRef50_Q8ZXD1 Cluster: Cytochrome C oxidase subunit I /III; n=... 54 4e-06
UniRef50_Q7NQZ0 Cluster: Cytochrome o ubiquinol oxidase, subunit... 53 6e-06
UniRef50_Q9WWR2 Cluster: Ubiquinol oxidase subunit 1 (EC 1.10.3.... 53 6e-06
UniRef50_Q9YDX6 Cluster: Heme-copper oxidase subunit I+III; n=1;... 53 8e-06
UniRef50_Q9TCV5 Cluster: Cytochrome c oxidase subunit I; n=6; Di... 52 1e-05
UniRef50_A5FXH8 Cluster: Cytochrome-c oxidase; n=1; Acidiphilium... 52 2e-05
UniRef50_Q9RR77 Cluster: Cytochrome c oxidase, subunit I; n=2; D... 51 2e-05
UniRef50_Q8LX82 Cluster: Cytochrome c oxidase subunit I; n=3; Ch... 51 3e-05
UniRef50_Q9Z605 Cluster: Quinol oxidase subunit I; n=15; Proteob... 50 4e-05
UniRef50_Q6RCN4 Cluster: Cytochrome c oxidase subunit I; n=1; Bu... 50 5e-05
UniRef50_Q6KZG3 Cluster: Cytochrome c oxidase polypeptide I/III;... 49 1e-04
UniRef50_P39481 Cluster: Quinol oxidase subunit 1/3; n=5; Sulfol... 47 4e-04
UniRef50_Q05FH1 Cluster: Cytochrome O ubiquinol oxidase subunit ... 47 5e-04
UniRef50_O86945 Cluster: Sub-unit I of an aa3-type cytochrome ox... 46 7e-04
UniRef50_Q9TAP7 Cluster: Cytochrome oxidase subunit 1; n=1; Clon... 43 0.008
UniRef50_O67937 Cluster: Cytochrome c oxidase subunit I; n=1; Aq... 42 0.019
UniRef50_Q396U4 Cluster: Cytochrome c oxidase, subunit I; n=18; ... 41 0.025
UniRef50_Q8LX68 Cluster: Cytochrome oxidase I; n=2; Chaoborus|Re... 41 0.025
UniRef50_Q6RJT8 Cluster: Cytochrome c oxidase subunit 2; n=1; Ha... 40 0.057
UniRef50_Q9YBH5 Cluster: Cytochrome c oxidase (Ba3-type) subunit... 40 0.075
UniRef50_Q5VI63 Cluster: SoxB; n=3; Sulfolobaceae|Rep: SoxB - Ac... 39 0.099
UniRef50_Q8HN76 Cluster: Cytochrome c oxidase subunit I; n=21; A... 39 0.13
UniRef50_Q604Y9 Cluster: Cytochrome c oxidase, subunit I; n=1; M... 38 0.30
UniRef50_Q8ZXC1 Cluster: Cytochrome C oxidase subunit I; n=3; Py... 38 0.30
UniRef50_A5URU0 Cluster: Cytochrome c oxidase, subunit I; n=4; C... 37 0.40
UniRef50_Q2W549 Cluster: Heme/copper-type cytochrome/quinol oxid... 36 0.70
UniRef50_Q28SZ6 Cluster: Cytochrome c oxidase subunit I; n=1; Ja... 36 0.70
UniRef50_Q3INR3 Cluster: Cytochrome-c-like terminal oxidase, sub... 36 0.70
UniRef50_P98004 Cluster: Quinol oxidase subunit 1 (EC 1.10.3.-) ... 36 0.93
UniRef50_Q6RHX4 Cluster: Cytochrome c oxidase subunit I; n=26; E... 36 1.2
UniRef50_A7D123 Cluster: Cytochrome-c oxidase; n=1; Halorubrum l... 35 2.1
UniRef50_Q9KEW0 Cluster: Cytochrome c oxidase subunit I; n=8; Ba... 34 2.8
UniRef50_Q8IE04 Cluster: Putative uncharacterized protein MAL13P... 34 2.8
UniRef50_A0D443 Cluster: Chromosome undetermined scaffold_37, wh... 34 2.8
UniRef50_Q2VQT0 Cluster: Heme-copper oxygen reductase; n=1; Rhod... 34 3.7
UniRef50_Q7R9D0 Cluster: Putative uncharacterized protein PY0693... 33 4.9
UniRef50_Q9X1F9 Cluster: UPF0078 membrane protein TM_1447; n=2; ... 33 4.9
UniRef50_Q8IC29 Cluster: Putative uncharacterized protein MAL7P1... 33 6.5
UniRef50_O07289 Cluster: Subunit I-homologue of cytochrome oxida... 33 6.5
UniRef50_A1RYT1 Cluster: Putative uncharacterized protein; n=1; ... 33 6.5
UniRef50_Q981A5 Cluster: Heme bearing subunit I of the terminal ... 33 8.6
UniRef50_Q56408 Cluster: Cytochrome c oxidase subunit 1 (EC 1.9.... 33 8.6
>UniRef50_Q6TP93 Cluster: Cytochrome c oxidase subunit I; n=2;
Bruchidius|Rep: Cytochrome c oxidase subunit I -
Bruchidius aff. varius GLK-2003
Length = 339
Score = 119 bits (287), Expect = 6e-26
Identities = 59/91 (64%), Positives = 66/91 (72%)
Frame = +2
Query: 251 PYIL*RLGFVFLFTVGGLTGVILANSSIDITLHDTYYVVAHFHYVLSXXXXXXXXXXXXN 430
P L LGFVFLFTVGGLTGV+LANSSIDI LHDTYYVVAHFHYVLS
Sbjct: 249 PVTLWTLGFVFLFTVGGLTGVVLANSSIDIVLHDTYYVVAHFHYVLSMGAVFAIMAGIVQ 308
Query: 431 *YPLFTGLSLNSYILKIQFFTIFIGVI*HFF 523
+PLFTG++LN++ LKIQF +FIGV FF
Sbjct: 309 WFPLFTGVTLNNFFLKIQFIIMFIGVNLTFF 339
Score = 107 bits (257), Expect = 3e-22
Identities = 51/83 (61%), Positives = 60/83 (72%)
Frame = +3
Query: 9 AHIISQERGKKETFXXXXXXXXXXXXXXXXFIV*AHHIFTVGIDIDTRAYFTSATIIIAV 188
+HIISQE GKKE F F+V AHH+FTVG+D+DTRAYFTSAT+IIAV
Sbjct: 168 SHIISQESGKKEAFGTLGMIYAMMAIGLLGFVVWAHHMFTVGMDVDTRAYFTSATMIIAV 227
Query: 189 PTGIKIFR*LATIHGTQINYNPI 257
PTGIK+F LAT HGTQI Y+P+
Sbjct: 228 PTGIKVFSWLATFHGTQILYSPV 250
>UniRef50_Q9MIY8 Cluster: Cytochrome c oxidase subunit 1; n=861;
root|Rep: Cytochrome c oxidase subunit 1 - Danio rerio
(Zebrafish) (Brachydanio rerio)
Length = 516
Score = 109 bits (262), Expect = 6e-23
Identities = 53/85 (62%), Positives = 61/85 (71%)
Frame = +2
Query: 269 LGFVFLFTVGGLTGVILANSSIDITLHDTYYVVAHFHYVLSXXXXXXXXXXXXN*YPLFT 448
LGF+FLFTVGGLTG++LANSS+DI LHDTYYVVAHFHYVLS + +PLFT
Sbjct: 342 LGFIFLFTVGGLTGIVLANSSLDIVLHDTYYVVAHFHYVLSMGAVFAIMAGFVHWFPLFT 401
Query: 449 GLSLNSYILKIQFFTIFIGVI*HFF 523
G +LNS KI F +FIGV FF
Sbjct: 402 GYTLNSVWTKIHFGVMFIGVNLTFF 426
Score = 89.8 bits (213), Expect = 5e-17
Identities = 41/80 (51%), Positives = 54/80 (67%)
Frame = +3
Query: 9 AHIISQERGKKETFXXXXXXXXXXXXXXXXFIV*AHHIFTVGIDIDTRAYFTSATIIIAV 188
+H+++ GKKE F FIV AHH+FTVG+D+DTRAYFTSAT+IIA+
Sbjct: 255 SHVVAYYAGKKEPFGYMGMVWAMMAIGLLGFIVWAHHMFTVGMDVDTRAYFTSATMIIAI 314
Query: 189 PTGIKIFR*LATIHGTQINY 248
PTG+K+F LAT+HG I +
Sbjct: 315 PTGVKVFSWLATLHGGAIKW 334
Score = 66.1 bits (154), Expect = 8e-10
Identities = 29/48 (60%), Positives = 36/48 (75%), Gaps = 6/48 (12%)
Frame = +1
Query: 469 YTKNSIFYNIYWS------NITFFPQHFLGLAGIPRRYSDYPDSYMSW 594
YT NS++ I++ N+TFFPQHFLGLAG+PRRYSDYPD+Y W
Sbjct: 403 YTLNSVWTKIHFGVMFIGVNLTFFPQHFLGLAGMPRRYSDYPDAYALW 450
>UniRef50_Q5GGF4 Cluster: Cytochrome c oxidase subunit I; n=2742;
Bilateria|Rep: Cytochrome c oxidase subunit I - Cotesia
melitaearum (Parasitoid wasp)
Length = 499
Score = 107 bits (257), Expect = 3e-22
Identities = 51/89 (57%), Positives = 61/89 (68%)
Frame = +2
Query: 257 IL*RLGFVFLFTVGGLTGVILANSSIDITLHDTYYVVAHFHYVLSXXXXXXXXXXXXN*Y 436
IL +GF+FLFTVGGLTGV+L+NSS+D+ LHDTYY VAHFHYVLS +
Sbjct: 322 ILWTMGFIFLFTVGGLTGVVLSNSSVDVVLHDTYYGVAHFHYVLSMGAVFSILGGFIYWF 381
Query: 437 PLFTGLSLNSYILKIQFFTIFIGVI*HFF 523
P+F GL +N Y LKI F+ FIGV FF
Sbjct: 382 PMFFGLMMNEYFLKIHFYLTFIGVNLIFF 410
Score = 89.8 bits (213), Expect = 5e-17
Identities = 43/81 (53%), Positives = 54/81 (66%)
Frame = +3
Query: 9 AHIISQERGKKETFXXXXXXXXXXXXXXXXFIV*AHHIFTVGIDIDTRAYFTSATIIIAV 188
+H+I E GKKETF FIV AHH+FT+G+D+DTRAYFTSAT+IIA+
Sbjct: 239 SHMIFNESGKKETFGMLGMIYAMLTIGFLGFIVWAHHMFTIGMDVDTRAYFTSATMIIAI 298
Query: 189 PTGIKIFR*LATIHGTQINYN 251
PTGIKIF +AT G ++ N
Sbjct: 299 PTGIKIFSWMATFSGVKLMNN 319
Score = 60.9 bits (141), Expect = 3e-08
Identities = 22/29 (75%), Positives = 27/29 (93%)
Frame = +1
Query: 508 NITFFPQHFLGLAGIPRRYSDYPDSYMSW 594
N+ FFPQHFLGL+G+PRRYSDYPD Y++W
Sbjct: 406 NLIFFPQHFLGLSGMPRRYSDYPDMYLNW 434
>UniRef50_Q9MCX7 Cluster: Cytochrome c oxidase subunit I; n=181;
Coelomata|Rep: Cytochrome c oxidase subunit I - Piculus
rubiginosus
Length = 504
Score = 106 bits (255), Expect = 4e-22
Identities = 53/91 (58%), Positives = 62/91 (68%)
Frame = +2
Query: 251 PYIL*RLGFVFLFTVGGLTGVILANSSIDITLHDTYYVVAHFHYVLSXXXXXXXXXXXXN 430
P +L LGF+FLFTVGGLTG++LANSS+DI LHDTYYVVAHFHYVLS +
Sbjct: 337 PPMLWALGFIFLFTVGGLTGIVLANSSLDIALHDTYYVVAHFHYVLSMGAVFAILAGFTH 396
Query: 431 *YPLFTGLSLNSYILKIQFFTIFIGVI*HFF 523
+PLFTG +LNS K F +F GV FF
Sbjct: 397 WFPLFTGYTLNSAWAKAHFGVMFTGVNLTFF 427
Score = 62.9 bits (146), Expect = 7e-09
Identities = 24/29 (82%), Positives = 27/29 (93%)
Frame = +1
Query: 508 NITFFPQHFLGLAGIPRRYSDYPDSYMSW 594
N+TFFPQHFLGLAG+PRRYSDYPD+Y W
Sbjct: 423 NLTFFPQHFLGLAGMPRRYSDYPDAYTLW 451
>UniRef50_Q6ZLV6 Cluster: Cytochrome c oxidase subunit I; n=941;
Eukaryota|Rep: Cytochrome c oxidase subunit I -
Ophisurus macrorhynchos
Length = 546
Score = 106 bits (254), Expect = 6e-22
Identities = 52/85 (61%), Positives = 60/85 (70%)
Frame = +2
Query: 269 LGFVFLFTVGGLTGVILANSSIDITLHDTYYVVAHFHYVLSXXXXXXXXXXXXN*YPLFT 448
LGF+FLFTVGGLTG++LANSSIDI LHDTYYVVAHFHYVLS + +PLFT
Sbjct: 342 LGFIFLFTVGGLTGIVLANSSIDIVLHDTYYVVAHFHYVLSMGAVFAIMAGFVHWFPLFT 401
Query: 449 GLSLNSYILKIQFFTIFIGVI*HFF 523
G +L+ KI F +FIGV FF
Sbjct: 402 GYTLHDTWTKIHFGVMFIGVNLTFF 426
Score = 89.8 bits (213), Expect = 5e-17
Identities = 41/80 (51%), Positives = 54/80 (67%)
Frame = +3
Query: 9 AHIISQERGKKETFXXXXXXXXXXXXXXXXFIV*AHHIFTVGIDIDTRAYFTSATIIIAV 188
+H+++ GKKE F FIV AHH+FTVG+D+DTRAYFTSAT+IIA+
Sbjct: 255 SHVVTYYAGKKEPFGYMGMVWAMMAIGLLGFIVWAHHMFTVGMDVDTRAYFTSATMIIAI 314
Query: 189 PTGIKIFR*LATIHGTQINY 248
PTG+K+F LAT+HG I +
Sbjct: 315 PTGVKVFSWLATLHGGAIKW 334
Score = 62.9 bits (146), Expect = 7e-09
Identities = 24/29 (82%), Positives = 27/29 (93%)
Frame = +1
Query: 508 NITFFPQHFLGLAGIPRRYSDYPDSYMSW 594
N+TFFPQHFLGLAG+PRRYSDYPD+Y W
Sbjct: 422 NLTFFPQHFLGLAGMPRRYSDYPDAYTLW 450
>UniRef50_Q951H1 Cluster: Cytochrome c oxidase subunit I; n=388;
Coelomata|Rep: Cytochrome c oxidase subunit I - Picoides
borealis
Length = 513
Score = 105 bits (252), Expect = 1e-21
Identities = 52/91 (57%), Positives = 62/91 (68%)
Frame = +2
Query: 251 PYIL*RLGFVFLFTVGGLTGVILANSSIDITLHDTYYVVAHFHYVLSXXXXXXXXXXXXN 430
P +L LGF+FLFTVGGLTG++LANSS+DI LHDTYYVVAHFHYVLS +
Sbjct: 337 PPMLWALGFIFLFTVGGLTGIVLANSSLDIALHDTYYVVAHFHYVLSMGAVFAILAGFTH 396
Query: 431 *YPLFTGLSLNSYILKIQFFTIFIGVI*HFF 523
+PLFTG +LN+ K F +F GV FF
Sbjct: 397 WFPLFTGYTLNNAWAKAHFGVMFTGVNLTFF 427
Score = 62.9 bits (146), Expect = 7e-09
Identities = 24/29 (82%), Positives = 27/29 (93%)
Frame = +1
Query: 508 NITFFPQHFLGLAGIPRRYSDYPDSYMSW 594
N+TFFPQHFLGLAG+PRRYSDYPD+Y W
Sbjct: 423 NLTFFPQHFLGLAGMPRRYSDYPDAYTLW 451
Score = 53.2 bits (122), Expect = 6e-06
Identities = 25/42 (59%), Positives = 31/42 (73%)
Frame = +3
Query: 129 VGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNP 254
VG+ + RAYFTSAT+IIA+PTGIK F LAT G I ++P
Sbjct: 296 VGMXVXPRAYFTSATMIIAIPTGIKAFSWLATXXGGTIKWDP 337
>UniRef50_P00395 Cluster: Cytochrome c oxidase subunit 1; n=44498;
root|Rep: Cytochrome c oxidase subunit 1 - Homo sapiens
(Human)
Length = 513
Score = 105 bits (252), Expect = 1e-21
Identities = 51/89 (57%), Positives = 62/89 (69%)
Frame = +2
Query: 257 IL*RLGFVFLFTVGGLTGVILANSSIDITLHDTYYVVAHFHYVLSXXXXXXXXXXXXN*Y 436
+L LGF+FLFTVGGLTG++LANSS+DI LHDTYYVVAHFHYVLS + +
Sbjct: 338 VLWALGFIFLFTVGGLTGIVLANSSLDIVLHDTYYVVAHFHYVLSMGAVFAIMGGFIHWF 397
Query: 437 PLFTGLSLNSYILKIQFFTIFIGVI*HFF 523
PLF+G +L+ KI F +FIGV FF
Sbjct: 398 PLFSGYTLDQTYAKIHFTIMFIGVNLTFF 426
Score = 91.1 bits (216), Expect = 2e-17
Identities = 41/81 (50%), Positives = 56/81 (69%)
Frame = +3
Query: 9 AHIISQERGKKETFXXXXXXXXXXXXXXXXFIV*AHHIFTVGIDIDTRAYFTSATIIIAV 188
+HI++ GKKE F FIV AHH+FTVG+D+DTRAYFTSAT+IIA+
Sbjct: 255 SHIVTYYSGKKEPFGYMGMVWAMMSIGFLGFIVWAHHMFTVGMDVDTRAYFTSATMIIAI 314
Query: 189 PTGIKIFR*LATIHGTQINYN 251
PTG+K+F LAT+HG+ + ++
Sbjct: 315 PTGVKVFSWLATLHGSNMKWS 335
Score = 65.3 bits (152), Expect = 1e-09
Identities = 31/57 (54%), Positives = 41/57 (71%)
Frame = +1
Query: 508 NITFFPQHFLGLAGIPRRYSDYPDSYMSWKYNFLH*VHIFLYVSGN**SINLIFEEF 678
N+TFFPQHFLGL+G+PRRYSDYPD+Y +W N L V F+ ++ I +I+E F
Sbjct: 422 NLTFFPQHFLGLSGMPRRYSDYPDAYTTW--NILSSVGSFISLTAVMLMIFMIWEAF 476
>UniRef50_P29649 Cluster: Cytochrome c oxidase subunit 1; n=441;
Bilateria|Rep: Cytochrome c oxidase subunit 1 - Pantodon
buchholtzi (Butterflyfish)
Length = 184
Score = 98.3 bits (234), Expect = 2e-19
Identities = 46/78 (58%), Positives = 57/78 (73%)
Frame = +2
Query: 269 LGFVFLFTVGGLTGVILANSSIDITLHDTYYVVAHFHYVLSXXXXXXXXXXXXN*YPLFT 448
LGF+FLFTVGGLTG+ILANSS+DI LHDTYYVVAHFHYVLS + +PLF+
Sbjct: 107 LGFIFLFTVGGLTGIILANSSLDIVLHDTYYVVAHFHYVLSMGAVFAIMGGFVHWFPLFS 166
Query: 449 GLSLNSYILKIQFFTIFI 502
G +L++ KI F +F+
Sbjct: 167 GYTLHNTWTKIHFGVMFM 184
Score = 91.1 bits (216), Expect = 2e-17
Identities = 42/81 (51%), Positives = 55/81 (67%)
Frame = +3
Query: 9 AHIISQERGKKETFXXXXXXXXXXXXXXXXFIV*AHHIFTVGIDIDTRAYFTSATIIIAV 188
+HI++ GKKE F FIV AHH+FTVG+D+DTRAYFTSAT+IIA+
Sbjct: 20 SHIVAYYSGKKEPFGYMGMVWAMMAIGLLGFIVWAHHMFTVGMDVDTRAYFTSATMIIAI 79
Query: 189 PTGIKIFR*LATIHGTQINYN 251
PTG+K+F LAT+HG I ++
Sbjct: 80 PTGVKVFSWLATLHGGSIKWD 100
>UniRef50_A7UG06 Cluster: Cytochrome oxidase subunits 1 and 2
polyprotein; n=1; Phaeosphaeria nodorum SN15|Rep:
Cytochrome oxidase subunits 1 and 2 polyprotein -
Phaeosphaeria nodorum SN15
Length = 789
Score = 92.3 bits (219), Expect = 1e-17
Identities = 46/91 (50%), Positives = 55/91 (60%)
Frame = +2
Query: 251 PYIL*RLGFVFLFTVGGLTGVILANSSIDITLHDTYYVVAHFHYVLSXXXXXXXXXXXXN 430
P +L LGFVF+FT+GGL+GV+LAN+S+DI HDTYYVVAHFHYVLS
Sbjct: 336 PSLLFALGFVFMFTIGGLSGVVLANASLDIAFHDTYYVVAHFHYVLSMGAVFALFSGWYF 395
Query: 431 *YPLFTGLSLNSYILKIQFFTIFIGVI*HFF 523
P GL N K F+ +F GV FF
Sbjct: 396 WIPKILGLDYNLLYSKAHFWVLFTGVNLTFF 426
Score = 77.4 bits (182), Expect = 3e-13
Identities = 33/52 (63%), Positives = 45/52 (86%)
Frame = +3
Query: 99 FIV*AHHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNP 254
F+V +HH++TVG+D+DTRAYFT+AT+IIAVPTGIKIF LAT +G +++ P
Sbjct: 285 FVVWSHHMYTVGLDVDTRAYFTAATLIIAVPTGIKIFSWLATCYGGSLHFIP 336
Score = 60.1 bits (139), Expect = 5e-08
Identities = 24/45 (53%), Positives = 31/45 (68%)
Frame = +1
Query: 466 LYTKNSIFYNIYWSNITFFPQHFLGLAGIPRRYSDYPDSYMSWKY 600
LY+K + N+TFFPQHFLGL G+PRR SDYPD++ W +
Sbjct: 408 LYSKAHFWVLFTGVNLTFFPQHFLGLQGMPRRISDYPDAFTGWNF 452
>UniRef50_Q85HI4 Cluster: Cytochrome c oxidase subunit I; n=7;
Echinoida|Rep: Cytochrome c oxidase subunit I -
Echinometra oblonga
Length = 386
Score = 91.5 bits (217), Expect = 2e-17
Identities = 41/65 (63%), Positives = 50/65 (76%)
Frame = +2
Query: 269 LGFVFLFTVGGLTGVILANSSIDITLHDTYYVVAHFHYVLSXXXXXXXXXXXXN*YPLFT 448
LGFVFLFT+GGLTG++LANSSID+ LHDTYYVVAHFHYVLS + +PLF+
Sbjct: 319 LGFVFLFTLGGLTGIVLANSSIDVVLHDTYYVVAHFHYVLSMGAVFAIFAGFTHWFPLFS 378
Query: 449 GLSLN 463
G +L+
Sbjct: 379 GYNLH 383
Score = 87.4 bits (207), Expect = 3e-16
Identities = 40/86 (46%), Positives = 58/86 (67%), Gaps = 1/86 (1%)
Frame = +3
Query: 9 AHIISQERGKKETFXXXXXXXXXXXXXXXXFIV*AHHIFTVGIDIDTRAYFTSATIIIAV 188
+H+I+ GK+E F F+V AHH+FTVG+D+DTRAYFT+AT+IIAV
Sbjct: 232 SHVIAHYSGKREPFGYLGMVYAMIAIGVLGFLVWAHHMFTVGMDVDTRAYFTAATMIIAV 291
Query: 189 PTGIKIFR*LATIHGTQINY-NPIFY 263
PTGIK+F +AT+ G+ + + P+F+
Sbjct: 292 PTGIKVFSWMATLQGSNLQWETPLFW 317
>UniRef50_P48866 Cluster: Cytochrome c oxidase subunit 1; n=179;
cellular organisms|Rep: Cytochrome c oxidase subunit 1 -
Chondrus crispus (Carragheen)
Length = 532
Score = 91.1 bits (216), Expect = 2e-17
Identities = 42/80 (52%), Positives = 54/80 (67%)
Frame = +2
Query: 269 LGFVFLFTVGGLTGVILANSSIDITLHDTYYVVAHFHYVLSXXXXXXXXXXXXN*YPLFT 448
+GF+FLFT+GGLTG++LANS +DI+LHDTYYVVAHFHYVLS + T
Sbjct: 349 IGFIFLFTIGGLTGIVLANSGLDISLHDTYYVVAHFHYVLSMGAVFAIFAGFYYWFGKIT 408
Query: 449 GLSLNSYILKIQFFTIFIGV 508
GL + +I F++ FIGV
Sbjct: 409 GLQYPETLGQIHFWSTFIGV 428
Score = 73.7 bits (173), Expect = 4e-12
Identities = 38/73 (52%), Positives = 48/73 (65%)
Frame = +3
Query: 9 AHIISQERGKKETFXXXXXXXXXXXXXXXXFIV*AHHIFTVGIDIDTRAYFTSATIIIAV 188
+HI+S +K F FIV AHH++TVG+D+DTRAYFT+AT+IIAV
Sbjct: 263 SHIVSTF-SRKPVFGYIGMVYAMVSIGVLGFIVWAHHMYTVGLDVDTRAYFTAATMIIAV 321
Query: 189 PTGIKIFR*LATI 227
PTGIKIF +ATI
Sbjct: 322 PTGIKIFSWIATI 334
Score = 54.0 bits (124), Expect = 3e-06
Identities = 20/29 (68%), Positives = 23/29 (79%)
Frame = +1
Query: 508 NITFFPQHFLGLAGIPRRYSDYPDSYMSW 594
N+TF P HFLGLAG+PRR DYPD+Y W
Sbjct: 429 NLTFMPMHFLGLAGMPRRIPDYPDAYAGW 457
>UniRef50_Q1NET5 Cluster: Cytochrome-c oxidase; n=3;
Alphaproteobacteria|Rep: Cytochrome-c oxidase -
Sphingomonas sp. SKA58
Length = 556
Score = 89.4 bits (212), Expect = 7e-17
Identities = 42/85 (49%), Positives = 53/85 (62%)
Frame = +2
Query: 269 LGFVFLFTVGGLTGVILANSSIDITLHDTYYVVAHFHYVLSXXXXXXXXXXXXN*YPLFT 448
LGF+FLFTVGG+TGV+LAN +D LHDTYYVVAHFHYVLS +P +
Sbjct: 384 LGFIFLFTVGGVTGVVLANGGVDDVLHDTYYVVAHFHYVLSLGAVFGLFAGFYYWFPKMS 443
Query: 449 GLSLNSYILKIQFFTIFIGVI*HFF 523
G N ++ ++ F+ F GV FF
Sbjct: 444 GKMYNEFLGQLHFWVFFAGVNLLFF 468
Score = 66.1 bits (154), Expect = 8e-10
Identities = 28/50 (56%), Positives = 40/50 (80%)
Frame = +3
Query: 99 FIV*AHHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINY 248
F+V AHH+FT G+ ++ + YFT+AT++IAVPTGIKIF +ATI G I++
Sbjct: 327 FVVWAHHMFTTGMSVNVKMYFTAATMVIAVPTGIKIFSWIATIWGGSISF 376
Score = 52.0 bits (119), Expect = 1e-05
Identities = 18/29 (62%), Positives = 24/29 (82%)
Frame = +1
Query: 508 NITFFPQHFLGLAGIPRRYSDYPDSYMSW 594
N+ FFP HFLGL+G+PRRY DYP+++ W
Sbjct: 464 NLLFFPMHFLGLSGMPRRYPDYPEAFAYW 492
>UniRef50_A2T435 Cluster: Cytochrome c oxidase subunit I; n=126;
Fungi/Metazoa group|Rep: Cytochrome c oxidase subunit I
- Placozoan sp. BZ2423
Length = 498
Score = 88.6 bits (210), Expect = 1e-16
Identities = 43/85 (50%), Positives = 54/85 (63%)
Frame = +2
Query: 269 LGFVFLFTVGGLTGVILANSSIDITLHDTYYVVAHFHYVLSXXXXXXXXXXXXN*YPLFT 448
LGF+FLFT+GGLTG++L+NSS+DI LHDTYYVVAHFHYVLS + T
Sbjct: 309 LGFIFLFTIGGLTGIVLSNSSLDILLHDTYYVVAHFHYVLSMGAVFAIFGGFYLWFGKIT 368
Query: 449 GLSLNSYILKIQFFTIFIGVI*HFF 523
G + I F+ +F+GV FF
Sbjct: 369 GYAYKDIYGLIHFWLMFLGVNITFF 393
Score = 70.5 bits (165), Expect = 4e-11
Identities = 33/49 (67%), Positives = 41/49 (83%)
Frame = +3
Query: 99 FIV*AHHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQIN 245
FIV A H++ VG+D+DTRAYFT+AT+IIAVPTGIKIF LAT+ G+ N
Sbjct: 250 FIVWADHMYVVGMDVDTRAYFTAATMIIAVPTGIKIFSWLATVSGSGRN 298
Score = 58.0 bits (134), Expect = 2e-07
Identities = 22/26 (84%), Positives = 26/26 (100%)
Frame = +1
Query: 508 NITFFPQHFLGLAGIPRRYSDYPDSY 585
NITFFPQHFLGLAG+PRRY+DYPD++
Sbjct: 389 NITFFPQHFLGLAGLPRRYADYPDNF 414
>UniRef50_Q8LX70 Cluster: Cytochrome c oxidase subunit I; n=4;
Chaoborus|Rep: Cytochrome c oxidase subunit I -
Chaoborus crystallinus (Phantom midge) (Tipula
crystallina)
Length = 207
Score = 88.2 bits (209), Expect = 2e-16
Identities = 40/47 (85%), Positives = 43/47 (91%)
Frame = +2
Query: 251 PYIL*RLGFVFLFTVGGLTGVILANSSIDITLHDTYYVVAHFHYVLS 391
P +L LGFVFLFTVGGLTGV+LANSS+DI LHDTYYVVAHFHYVLS
Sbjct: 40 PSLLWALGFVFLFTVGGLTGVVLANSSLDIVLHDTYYVVAHFHYVLS 86
Score = 68.5 bits (160), Expect = 1e-10
Identities = 31/40 (77%), Positives = 36/40 (90%)
Frame = +3
Query: 135 IDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNP 254
+ + TRAYFTSAT+IIAVPTGIKIF LAT+HGTQINY+P
Sbjct: 1 LTLHTRAYFTSATMIIAVPTGIKIFSWLATLHGTQINYSP 40
Score = 37.1 bits (82), Expect = 0.40
Identities = 24/78 (30%), Positives = 36/78 (46%)
Frame = +1
Query: 406 CNYWGIY*LISFIYRPFIKFLYTKNSIFYNIYWSNITFFPQHFLGLAGIPRRYSDYPDSY 585
C Y IY L+ FI K L KNSIF NI+ FP FL ++
Sbjct: 92 CYYVSIYPLMPFINWVINKPLMIKNSIFNNIFSCKFNIFPPTFLSISRDASTMLWLSWLI 151
Query: 586 MSWKYNFLH*VHIFLYVS 639
+ KY+F ++ F++++
Sbjct: 152 LLLKYHFKSWINTFIFLN 169
>UniRef50_Q1XA94 Cluster: Cytochrome c oxidase subunit I; n=825;
Eukaryota|Rep: Cytochrome c oxidase subunit I -
Paracoccidioides brasiliensis
Length = 710
Score = 87.0 bits (206), Expect = 4e-16
Identities = 44/85 (51%), Positives = 54/85 (63%)
Frame = +2
Query: 269 LGFVFLFTVGGLTGVILANSSIDITLHDTYYVVAHFHYVLSXXXXXXXXXXXXN*YPLFT 448
LGFV +FT+GGL+GV+LAN+S +I HDTYYVVAHFHYVLS P
Sbjct: 368 LGFVVMFTIGGLSGVVLANASENIAFHDTYYVVAHFHYVLSMGAVFALFSGWYFWIPKII 427
Query: 449 GLSLNSYILKIQFFTIFIGVI*HFF 523
GLS ++ KI F+ +FIGV FF
Sbjct: 428 GLSYDTKASKIHFWILFIGVNLTFF 452
Score = 75.4 bits (177), Expect = 1e-12
Identities = 31/50 (62%), Positives = 44/50 (88%)
Frame = +3
Query: 99 FIV*AHHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINY 248
FIV +HH++TVG+D+DTRAYFT+AT+IIA+PTG+KIF LAT +G +++
Sbjct: 311 FIVWSHHMYTVGLDVDTRAYFTAATLIIAIPTGVKIFSWLATCYGGSLHF 360
Score = 56.4 bits (130), Expect = 6e-07
Identities = 21/29 (72%), Positives = 25/29 (86%)
Frame = +1
Query: 508 NITFFPQHFLGLAGIPRRYSDYPDSYMSW 594
N+TFFPQHFLGL G+PRR SDYPD++ W
Sbjct: 448 NLTFFPQHFLGLQGMPRRISDYPDAFEGW 476
>UniRef50_Q6XYE8 Cluster: Cytochrome c oxidase subunit I; n=2;
Endopterygota|Rep: Cytochrome c oxidase subunit I -
Copitarsia incommoda
Length = 150
Score = 85.8 bits (203), Expect = 9e-16
Identities = 48/103 (46%), Positives = 56/103 (54%), Gaps = 1/103 (0%)
Frame = +2
Query: 11 SYYFTRKRKKRNFWLFRNNLCYTSNWVIRIYCLSSSYIHCXXXXXXXXXXXXXXXXXXXX 190
SYYF K KK N W+F +NLCY SNW+I IYCLSSSYI+
Sbjct: 49 SYYFPSKSKKGNLWVFSDNLCYISNWIISIYCLSSSYIYSSNSYWYSTYFTSATMIIAVP 108
Query: 191 XXXXXF-*MTSYNTWNSN*L*PYIL*RLGFVFLFTVGGLTGVI 316
F + +++ N P IL LGFVFLFTVGGLTGVI
Sbjct: 109 TGIKIFSWLATFHGTQIN-YSPSILWSLGFVFLFTVGGLTGVI 150
Score = 61.3 bits (142), Expect = 2e-08
Identities = 28/33 (84%), Positives = 30/33 (90%)
Frame = +3
Query: 156 YFTSATIIIAVPTGIKIFR*LATIHGTQINYNP 254
YFTSAT+IIAVPTGIKIF LAT HGTQINY+P
Sbjct: 97 YFTSATMIIAVPTGIKIFSWLATFHGTQINYSP 129
>UniRef50_O47573 Cluster: Cytochrome c oxidase subunit I; n=42;
Nematoda|Rep: Cytochrome c oxidase subunit I -
Onchocerca volvulus
Length = 548
Score = 83.8 bits (198), Expect = 4e-15
Identities = 51/134 (38%), Positives = 71/134 (52%), Gaps = 7/134 (5%)
Frame = +2
Query: 275 FVFLFTVGGLTGVILANSSIDITLHDTYYVVAHFHYVLSXXXXXXXXXXXXN*YPLFTGL 454
F+FLFTVGGL+G+IL+ +S+DI LHDTYYVVAHFHY LS P G+
Sbjct: 354 FIFLFTVGGLSGIILSAASLDIILHDTYYVVAHFHYTLSLGAIYGIFCGFCLWLPYMYGI 413
Query: 455 SLNSYILKIQFFTIFIGVI*HFFLNIF-------*V*LEYLDDIQIIQTHICHGNIIFFI 613
S +S ++ F F+G FF F L+Y D Q G++I F+
Sbjct: 414 SFDSVMMMAVFVCFFVGTNMTFFPMHFAGLQGMPRKILDYPDCYSTFQIISSLGSVITFV 473
Query: 614 RFIYFSMYQVINKV 655
F+ F+ Y +I+ +
Sbjct: 474 GFVLFN-YLLIDSI 486
Score = 61.3 bits (142), Expect = 2e-08
Identities = 24/49 (48%), Positives = 36/49 (73%)
Frame = +3
Query: 114 HHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPIF 260
HH++T G+DIDTR YF++AT+IIA+P+ +KIF L T G+ P++
Sbjct: 300 HHMYTAGLDIDTRTYFSAATMIIAIPSAVKIFNWLGTFFGSNQKMQPLW 348
>UniRef50_P60620 Cluster: Cytochrome c oxidase subunit 1; n=2931;
cellular organisms|Rep: Cytochrome c oxidase subunit 1 -
Arabidopsis thaliana (Mouse-ear cress)
Length = 527
Score = 82.6 bits (195), Expect = 8e-15
Identities = 41/85 (48%), Positives = 51/85 (60%)
Frame = +2
Query: 269 LGFVFLFTVGGLTGVILANSSIDITLHDTYYVVAHFHYVLSXXXXXXXXXXXXN*YPLFT 448
+GF+FLFT+GGLTG++LANS +DI LHDTYYVVAHFHYVLS
Sbjct: 344 VGFIFLFTIGGLTGIVLANSGLDIALHDTYYVVAHFHYVLSMGAVFALFAGFYYWVGKIF 403
Query: 449 GLSLNSYILKIQFFTIFIGVI*HFF 523
G + + +I F+ F GV FF
Sbjct: 404 GRTYPETLGQIHFWITFFGVNLTFF 428
Score = 79.4 bits (187), Expect = 8e-14
Identities = 41/80 (51%), Positives = 51/80 (63%)
Frame = +3
Query: 9 AHIISQERGKKETFXXXXXXXXXXXXXXXXFIV*AHHIFTVGIDIDTRAYFTSATIIIAV 188
+HI+S GK F F+V AHH+FTVG+D+DTRAYFT+AT+IIAV
Sbjct: 258 SHIVSTFSGKP-VFGYLGMVYAMISIGVLGFLVWAHHMFTVGLDVDTRAYFTAATMIIAV 316
Query: 189 PTGIKIFR*LATIHGTQINY 248
PTGIKIF +AT+ G I Y
Sbjct: 317 PTGIKIFSWIATMWGGSIQY 336
Score = 55.2 bits (127), Expect = 1e-06
Identities = 20/29 (68%), Positives = 24/29 (82%)
Frame = +1
Query: 508 NITFFPQHFLGLAGIPRRYSDYPDSYMSW 594
N+TFFP HFLGL+G+PRR DYPD+Y W
Sbjct: 424 NLTFFPMHFLGLSGMPRRIPDYPDAYAGW 452
>UniRef50_Q9B8X8 Cluster: Cytochrome c oxidase subunit I; n=517;
Bilateria|Rep: Cytochrome c oxidase subunit I -
Schistosoma mansoni (Blood fluke)
Length = 609
Score = 81.0 bits (191), Expect = 2e-14
Identities = 40/91 (43%), Positives = 54/91 (59%)
Frame = +2
Query: 251 PYIL*RLGFVFLFTVGGLTGVILANSSIDITLHDTYYVVAHFHYVLSXXXXXXXXXXXXN 430
P + +GF+FLFTVGG+TGV L+ S++DI HDT++VVAHFHYVLS
Sbjct: 427 PIVWWLVGFIFLFTVGGVTGVALSASALDILFHDTWFVVAHFHYVLSLGSYSSIVIMLVW 486
Query: 431 *YPLFTGLSLNSYILKIQFFTIFIGVI*HFF 523
+P G SLN Y+L+ + +G FF
Sbjct: 487 WWPFIVGYSLNKYLLQGHWLLSMVGFNLCFF 517
Score = 46.4 bits (105), Expect = 7e-04
Identities = 20/36 (55%), Positives = 26/36 (72%)
Frame = +3
Query: 102 IV*AHHIFTVGIDIDTRAYFTSATIIIAVPTGIKIF 209
+V HH+F VG D T +F+S T+II VPTGIK+F
Sbjct: 376 VVWGHHMFMVGFDSLTGVFFSSITMIIGVPTGIKVF 411
Score = 38.3 bits (85), Expect = 0.17
Identities = 14/26 (53%), Positives = 18/26 (69%)
Frame = +1
Query: 508 NITFFPQHFLGLAGIPRRYSDYPDSY 585
N+ FFP H+LG+ G+PRR S Y Y
Sbjct: 513 NLCFFPMHYLGIHGLPRRVSCYDQEY 538
>UniRef50_Q5W914 Cluster: Cytochrome c oxidase subunit I; n=9;
Coelomata|Rep: Cytochrome c oxidase subunit I - Lingula
unguis
Length = 573
Score = 80.6 bits (190), Expect = 3e-14
Identities = 40/85 (47%), Positives = 51/85 (60%)
Frame = +2
Query: 269 LGFVFLFTVGGLTGVILANSSIDITLHDTYYVVAHFHYVLSXXXXXXXXXXXXN*YPLFT 448
+G V LFT+GGLTGVILAN+++ LHD+YYVVAHFHYVLS +P +T
Sbjct: 348 IGVVLLFTIGGLTGVILANAALSTLLHDSYYVVAHFHYVLSMGAVFAIFGGFWFWFPFWT 407
Query: 449 GLSLNSYILKIQFFTIFIGVI*HFF 523
G+ ++ F FIGV FF
Sbjct: 408 GMVPRKDLVLTHFMLTFIGVNFTFF 432
Score = 73.3 bits (172), Expect = 5e-12
Identities = 34/75 (45%), Positives = 45/75 (60%)
Frame = +3
Query: 9 AHIISQERGKKETFXXXXXXXXXXXXXXXXFIV*AHHIFTVGIDIDTRAYFTSATIIIAV 188
+HI+ + K F F+V HH+F G+DIDTRAYFT+AT++IAV
Sbjct: 258 SHILCRSSAKLHVFGKIGMSWASMGIAWMGFLVWGHHMFVAGLDIDTRAYFTAATLMIAV 317
Query: 189 PTGIKIFR*LATIHG 233
PTG+K+F LATI G
Sbjct: 318 PTGVKVFNWLATIFG 332
Score = 51.2 bits (117), Expect = 2e-05
Identities = 18/30 (60%), Positives = 23/30 (76%)
Frame = +1
Query: 508 NITFFPQHFLGLAGIPRRYSDYPDSYMSWK 597
N TFFP H++GL G+PRRY DYPD + W+
Sbjct: 428 NFTFFPMHWMGLTGMPRRYQDYPDIHSVWQ 457
>UniRef50_Q9G8S1 Cluster: Cytochrome c oxidase subunit 1; n=1;
Naegleria gruberi|Rep: Cytochrome c oxidase subunit 1 -
Naegleria gruberi
Length = 633
Score = 80.2 bits (189), Expect = 4e-14
Identities = 39/84 (46%), Positives = 52/84 (61%)
Frame = +2
Query: 272 GFVFLFTVGGLTGVILANSSIDITLHDTYYVVAHFHYVLSXXXXXXXXXXXXN*YPLFTG 451
GFV LFT+GG+TG+IL+N+ ID ++HDT+YVV HFHYVLS + TG
Sbjct: 346 GFVVLFTIGGITGIILSNAGIDTSIHDTHYVVGHFHYVLSMGAVFAIYGGFYYWWGKMTG 405
Query: 452 LSLNSYILKIQFFTIFIGVI*HFF 523
LS + + + F+ FIGV FF
Sbjct: 406 LSYSESLGQAHFWMTFIGVNFTFF 429
Score = 71.3 bits (167), Expect = 2e-11
Identities = 37/86 (43%), Positives = 52/86 (60%), Gaps = 1/86 (1%)
Frame = +3
Query: 9 AHIISQERGKKETFXXXXXXXXXXXXXXXXFIV*AHHIFTVGIDIDTRAYFTSATIIIAV 188
+HII+ KK F FIV AHH++T GID T+AYFT+AT++IA+
Sbjct: 259 SHIIATF-SKKRVFGHVPMIAAMLMIGLIGFIVWAHHMYTSGIDTSTKAYFTAATMVIAI 317
Query: 189 PTGIKIFR*LATIHGTQI-NYNPIFY 263
PTGIK+F +AT+ G I Y P+++
Sbjct: 318 PTGIKVFNWIATMWGGSIWMYTPMYF 343
Score = 46.8 bits (106), Expect = 5e-04
Identities = 18/26 (69%), Positives = 19/26 (73%)
Frame = +1
Query: 508 NITFFPQHFLGLAGIPRRYSDYPDSY 585
N TFFP HFLG G+PRR DYPD Y
Sbjct: 425 NFTFFPMHFLGSGGMPRRIPDYPDMY 450
>UniRef50_Q9MLW1 Cluster: Cytochrome c oxidase subunit I; n=5;
Naupactini|Rep: Cytochrome c oxidase subunit I -
Galapaganus collaris
Length = 406
Score = 78.6 bits (185), Expect = 1e-13
Identities = 46/94 (48%), Positives = 50/94 (53%)
Frame = +2
Query: 218 SYNTWNSN*L*PYIL*RLGFVFLFTVGGLTGVILANSSIDITLHDTYYVVAHFHYVLSXX 397
SY + N N P I F GGLTGVILANSS DI LHDTYYVVAH HYVLS
Sbjct: 243 SYLSGNFNFXKPQIFMIFSIYFSIHGGGLTGVILANSSXDIILHDTYYVVAHXHYVLSMG 302
Query: 398 XXXXXXXXXXN*YPLFTGLSLNSYILKIQFFTIF 499
+PLFTGL+L I F I+
Sbjct: 303 AVFAILAGIVQWFPLFTGLTLTMNIKNTIFSYIY 336
Score = 36.3 bits (80), Expect = 0.70
Identities = 20/40 (50%), Positives = 27/40 (67%)
Frame = +3
Query: 510 YNIFSSTFFRFSWNTSTIFRLSRLIYVMEI*FSSLGSYIS 629
+NIFSST S NT+T+F LS ++ M+ SS+GS IS
Sbjct: 340 FNIFSSTLCSISSNTTTLFWLSSCLHFMKC-CSSIGSXIS 378
>UniRef50_Q7YEU6 Cluster: Endonuclease; n=4; Fungi/Metazoa
group|Rep: Endonuclease - Saccharomyces servazzii
(Yeast)
Length = 675
Score = 74.9 bits (176), Expect = 2e-12
Identities = 39/78 (50%), Positives = 49/78 (62%)
Frame = +3
Query: 9 AHIISQERGKKETFXXXXXXXXXXXXXXXXFIV*AHHIFTVGIDIDTRAYFTSATIIIAV 188
+HI+S KK F F+V +HH++ VG+D DTRAYFTSAT+IIA+
Sbjct: 256 SHIVSTY-SKKPVFGEISMVYAMASIGLLGFLVWSHHMYIVGLDADTRAYFTSATMIIAI 314
Query: 189 PTGIKIFR*LATIHGTQI 242
PTGIKIF LATI+G I
Sbjct: 315 PTGIKIFSWLATIYGGSI 332
Score = 49.2 bits (112), Expect = 9e-05
Identities = 19/28 (67%), Positives = 25/28 (89%)
Frame = +2
Query: 269 LGFVFLFTVGGLTGVILANSSIDITLHD 352
+ F+FLFTVGGLTGV+LAN+S+D+ HD
Sbjct: 342 IAFLFLFTVGGLTGVVLANASLDVAFHD 369
>UniRef50_Q8SHP5 Cluster: Cytochrome c oxidase subunit I; n=15;
Fungi/Metazoa group|Rep: Cytochrome c oxidase subunit I
- Trichoderma reesei (Hypocrea jecorina)
Length = 635
Score = 74.5 bits (175), Expect = 2e-12
Identities = 32/48 (66%), Positives = 40/48 (83%)
Frame = +3
Query: 114 HHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPI 257
HH++TVG+D+DTRAYFT+AT+IIAVPTGIKIF LAT +G I P+
Sbjct: 349 HHMYTVGLDVDTRAYFTAATLIIAVPTGIKIFSWLATCYGGSIKMTPV 396
Score = 55.6 bits (128), Expect = 1e-06
Identities = 21/29 (72%), Positives = 24/29 (82%)
Frame = +1
Query: 508 NITFFPQHFLGLAGIPRRYSDYPDSYMSW 594
N TFFPQHFLGL G+PRR SDYPD++ W
Sbjct: 529 NATFFPQHFLGLQGMPRRISDYPDAFAGW 557
Score = 52.0 bits (119), Expect(2) = 4e-10
Identities = 29/54 (53%), Positives = 35/54 (64%), Gaps = 14/54 (25%)
Frame = +2
Query: 251 PYIL*RLGFVFLFTVGGL--------------TGVILANSSIDITLHDTYYVVA 370
P +L LGFVFLFT+GGL +GV+LAN+S+DI HDTYYVVA
Sbjct: 395 PVMLFSLGFVFLFTIGGLLNHLLWKINKFRFVSGVVLANASLDIAFHDTYYVVA 448
Score = 35.1 bits (77), Expect(2) = 4e-10
Identities = 19/58 (32%), Positives = 27/58 (46%)
Frame = +2
Query: 350 DTYYVVAHFHYVLSXXXXXXXXXXXXN*YPLFTGLSLNSYILKIQFFTIFIGVI*HFF 523
+T + HFHYVLS P G + + + K+QF+ +FIGV FF
Sbjct: 476 ETMLFIVHFHYVLSMGAVFAMFAGWYFWSPKMLGFNYDLNLAKMQFWLLFIGVNATFF 533
>UniRef50_Q0H8Y3 Cluster: Probable intron-encoded endonuclease aI8
precursor [Contains: Truncated non-functional cytochrome
oxidase 1; Intron-encoded endonuclease aI8 (EC
3.1.-.-)]; n=103; Eukaryota|Rep: Probable intron-encoded
endonuclease aI8 precursor [Contains: Truncated
non-functional cytochrome oxidase 1; Intron-encoded
endonuclease aI8 (EC 3.1.-.-)] - Ustilago maydis (Smut
fungus)
Length = 645
Score = 74.1 bits (174), Expect = 3e-12
Identities = 37/75 (49%), Positives = 49/75 (65%)
Frame = +3
Query: 9 AHIISQERGKKETFXXXXXXXXXXXXXXXXFIV*AHHIFTVGIDIDTRAYFTSATIIIAV 188
+HI+S GK F F+V +HH++ VG+D+DTRAYFT+AT+IIAV
Sbjct: 255 SHIVSAFSGKP-VFGYLGMVYAMFSIGILGFLVWSHHMYAVGLDVDTRAYFTAATMIIAV 313
Query: 189 PTGIKIFR*LATIHG 233
PTGIKIF LAT++G
Sbjct: 314 PTGIKIFSWLATLYG 328
Score = 53.2 bits (122), Expect = 6e-06
Identities = 22/31 (70%), Positives = 27/31 (87%)
Frame = +2
Query: 269 LGFVFLFTVGGLTGVILANSSIDITLHDTYY 361
LGF+ LFT+GGLTGVILAN+S+D+ LHD Y
Sbjct: 341 LGFIALFTIGGLTGVILANASLDVALHDLKY 371
>UniRef50_Q8LX74 Cluster: Cytochrome c oxidase subunit I; n=1;
Chaoborus punctipennis|Rep: Cytochrome c oxidase subunit
I - Chaoborus punctipennis
Length = 205
Score = 73.3 bits (172), Expect = 5e-12
Identities = 33/39 (84%), Positives = 36/39 (92%)
Frame = +3
Query: 138 DIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNP 254
D+DTRAYFTSAT+IIAVPTGIKIF LAT+HGTQINY P
Sbjct: 1 DVDTRAYFTSATMIIAVPTGIKIFSWLATLHGTQINYTP 39
>UniRef50_Q28SZ5 Cluster: Cytochrome-c oxidase; n=50; cellular
organisms|Rep: Cytochrome-c oxidase - Jannaschia sp.
(strain CCS1)
Length = 628
Score = 72.9 bits (171), Expect = 7e-12
Identities = 35/85 (41%), Positives = 47/85 (55%)
Frame = +2
Query: 269 LGFVFLFTVGGLTGVILANSSIDITLHDTYYVVAHFHYVLSXXXXXXXXXXXXN*YPLFT 448
LGF+FLFT+GG TG+IL+ + +D HDTYYVVAHFHYV+S +
Sbjct: 447 LGFIFLFTLGGTTGIILSQAGVDRAYHDTYYVVAHFHYVMSLGAVFGIFAAVYYWIGKMS 506
Query: 449 GLSLNSYILKIQFFTIFIGVI*HFF 523
G + ++ F+ FIG FF
Sbjct: 507 GRQYPEWAGQVHFWVFFIGTNITFF 531
Score = 58.4 bits (135), Expect = 2e-07
Identities = 22/32 (68%), Positives = 26/32 (81%)
Frame = +1
Query: 505 SNITFFPQHFLGLAGIPRRYSDYPDSYMSWKY 600
+NITFFPQHFLG G+PRRY DYPD++ W Y
Sbjct: 526 TNITFFPQHFLGRQGMPRRYIDYPDAFALWNY 557
Score = 57.6 bits (133), Expect = 3e-07
Identities = 26/50 (52%), Positives = 38/50 (76%)
Frame = +3
Query: 99 FIV*AHHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINY 248
F+V AHH++TVG+ + +AYF AT++IAVPTGIKIF +AT+ I++
Sbjct: 390 FVVWAHHMYTVGMTLTQQAYFMVATMVIAVPTGIKIFSWIATMWMGSISF 439
>UniRef50_Q1H1C1 Cluster: Cytochrome-c oxidase; n=1; Methylobacillus
flagellatus KT|Rep: Cytochrome-c oxidase -
Methylobacillus flagellatus (strain KT / ATCC 51484 /
DSM 6875)
Length = 631
Score = 72.5 bits (170), Expect = 9e-12
Identities = 35/85 (41%), Positives = 48/85 (56%)
Frame = +2
Query: 269 LGFVFLFTVGGLTGVILANSSIDITLHDTYYVVAHFHYVLSXXXXXXXXXXXXN*YPLFT 448
LGF +F +GGL+GV++A+ D+ HDTY+VVAHFHYVL YP FT
Sbjct: 363 LGFFLIFIIGGLSGVMVASVPFDMQAHDTYFVVAHFHYVLIGGAVFPLLGGLYYWYPKFT 422
Query: 449 GLSLNSYILKIQFFTIFIGVI*HFF 523
G ++ + K+ F+ F G FF
Sbjct: 423 GRMMSERLGKVAFWVTFAGFNLTFF 447
Score = 40.7 bits (91), Expect = 0.033
Identities = 16/42 (38%), Positives = 31/42 (73%)
Frame = +3
Query: 114 HHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQ 239
HH+FT G+ +FT+++ +IA+P+G++IF +AT+ G++
Sbjct: 311 HHMFTAGLPQLGSNFFTASSAMIAIPSGVQIFCWIATLWGSK 352
Score = 37.1 bits (82), Expect = 0.40
Identities = 16/29 (55%), Positives = 19/29 (65%)
Frame = +1
Query: 508 NITFFPQHFLGLAGIPRRYSDYPDSYMSW 594
N+TFFP H LGL G+PRR Y D + W
Sbjct: 443 NLTFFPMHKLGLEGMPRRVYTYLDG-LGW 470
>UniRef50_A7BSH8 Cluster: Cytochrome c oxidase aa3, subunit 1; n=1;
Beggiatoa sp. PS|Rep: Cytochrome c oxidase aa3, subunit
1 - Beggiatoa sp. PS
Length = 525
Score = 71.7 bits (168), Expect = 2e-11
Identities = 36/80 (45%), Positives = 46/80 (57%)
Frame = +2
Query: 269 LGFVFLFTVGGLTGVILANSSIDITLHDTYYVVAHFHYVLSXXXXXXXXXXXXN*YPLFT 448
LGF+FLF +GGLTGV LA S+ + L +TYYVV HFHYV++ +P T
Sbjct: 342 LGFIFLFLIGGLTGVPLALVSLTVHLSETYYVVGHFHYVMAVAGTFAIFGGVYYIFPKMT 401
Query: 449 GLSLNSYILKIQFFTIFIGV 508
G N I K F+ F+GV
Sbjct: 402 GKMYNETIGKWAFWITFVGV 421
>UniRef50_Q9XLV8 Cluster: Cytochrome c oxidase subunit I; n=1;
Diplonema papillatum|Rep: Cytochrome c oxidase subunit I
- Diplonema papillatum
Length = 287
Score = 70.9 bits (166), Expect = 3e-11
Identities = 30/79 (37%), Positives = 50/79 (63%)
Frame = +2
Query: 269 LGFVFLFTVGGLTGVILANSSIDITLHDTYYVVAHFHYVLSXXXXXXXXXXXXN*YPLFT 448
+ F+ +F +GG+TG++LANS +D+ +HD+YYVVAHFHYVLS + + L +
Sbjct: 98 VAFLLMFLLGGVTGLVLANSEVDLVMHDSYYVVAHFHYVLSLGAVFGLLNGVLSCHELCS 157
Query: 449 GLSLNSYILKIQFFTIFIG 505
G +++L++Q + G
Sbjct: 158 GYRSAAWLLRVQVVLLVWG 176
Score = 61.3 bits (142), Expect = 2e-08
Identities = 24/37 (64%), Positives = 33/37 (89%)
Frame = +3
Query: 99 FIV*AHHIFTVGIDIDTRAYFTSATIIIAVPTGIKIF 209
+ V AHH+FTVG+D+DTR YF+SAT++IA+PT IK+F
Sbjct: 42 YFVWAHHMFTVGLDVDTRVYFSSATLLIALPTSIKVF 78
>UniRef50_Q11EK8 Cluster: Cytochrome c oxidase, subunit I; n=5;
Proteobacteria|Rep: Cytochrome c oxidase, subunit I -
Mesorhizobium sp. (strain BNC1)
Length = 845
Score = 70.5 bits (165), Expect = 4e-11
Identities = 37/85 (43%), Positives = 50/85 (58%)
Frame = +2
Query: 269 LGFVFLFTVGGLTGVILANSSIDITLHDTYYVVAHFHYVLSXXXXXXXXXXXXN*YPLFT 448
LGF+F+FTVGG+TGV++A ID +HDTY+VVAHFHYVL P F+
Sbjct: 369 LGFLFIFTVGGVTGVMVALVPIDFQVHDTYFVVAHFHYVLIGGMVFPLFATFYYWIPAFS 428
Query: 449 GLSLNSYILKIQFFTIFIGVI*HFF 523
L+ + + F+ +FIG FF
Sbjct: 429 RNMLSERLGRWVFWLMFIGFNVTFF 453
Score = 41.9 bits (94), Expect = 0.014
Identities = 16/38 (42%), Positives = 29/38 (76%)
Frame = +3
Query: 114 HHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATI 227
HH+FT GI + +F++A++ +A+P+GI++F +ATI
Sbjct: 315 HHMFTTGIPSLSLGFFSAASMAVAIPSGIQVFSWIATI 352
Score = 41.5 bits (93), Expect = 0.019
Identities = 19/46 (41%), Positives = 26/46 (56%), Gaps = 1/46 (2%)
Frame = +1
Query: 508 NITFFPQHFLGLAGIPRRYSDYPDSYMSWK-YNFLH*VHIFLYVSG 642
N+TFFP H GL G+PRR YPD + W N + V ++ +G
Sbjct: 449 NVTFFPMHMAGLLGMPRRVRTYPDG-LGWNALNMVSTVGSYILAAG 493
>UniRef50_A1ZL77 Cluster: Alternative Cytochrome c oxidase
polypeptide I (Cytochrome BB3 subunit 1) (Oxidase BB(3)
subunit 1); n=20; cellular organisms|Rep: Alternative
Cytochrome c oxidase polypeptide I (Cytochrome BB3
subunit 1) (Oxidase BB(3) subunit 1) - Microscilla
marina ATCC 23134
Length = 635
Score = 70.5 bits (165), Expect = 4e-11
Identities = 34/91 (37%), Positives = 51/91 (56%)
Frame = +2
Query: 251 PYIL*RLGFVFLFTVGGLTGVILANSSIDITLHDTYYVVAHFHYVLSXXXXXXXXXXXXN 430
P ++ +G V +F GG+TG+IL N+++DI LHDTYYVVAHFH V+ +
Sbjct: 397 PAMMFSIGLVSMFISGGVTGIILGNNAMDIQLHDTYYVVAHFHLVMGSASFFGMMAGVYH 456
Query: 431 *YPLFTGLSLNSYILKIQFFTIFIGVI*HFF 523
+P G ++ + I F+ F+G FF
Sbjct: 457 WFPKMFGRMMDEKLGYIHFWFTFVGAYLVFF 487
Score = 40.7 bits (91), Expect = 0.033
Identities = 20/52 (38%), Positives = 30/52 (57%)
Frame = +3
Query: 99 FIV*AHHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNP 254
FIV AHH+F G++ + F T+IIAVP+ +K F + T+ I + P
Sbjct: 346 FIVWAHHMFVTGMNPFLGSVFMFLTLIIAVPSAVKSFNYITTLWRGNIIFTP 397
Score = 34.7 bits (76), Expect = 2.1
Identities = 11/18 (61%), Positives = 15/18 (83%)
Frame = +1
Query: 511 ITFFPQHFLGLAGIPRRY 564
+ FFP H++G+AG PRRY
Sbjct: 484 LVFFPMHYIGIAGFPRRY 501
>UniRef50_Q6ED53 Cluster: Cox1-i5 protein; n=2; Candida
stellata|Rep: Cox1-i5 protein - Candida stellata (Yeast)
Length = 763
Score = 68.9 bits (161), Expect = 1e-10
Identities = 36/83 (43%), Positives = 48/83 (57%), Gaps = 1/83 (1%)
Frame = +3
Query: 18 ISQERGKKETFXXXXXXXXXXXXXXXXFIV*AHHIFTVGIDIDTRAYFTSATIIIAVPTG 197
I Q KK F F V +HH+FTVG+D D+RAYF+ A++IIA+PTG
Sbjct: 275 IVQVYAKKPIFGKIGMIYAMASIGFLGFCVWSHHMFTVGLDADSRAYFSGASLIIAIPTG 334
Query: 198 IKIFR*LATIHGTQINY-NPIFY 263
KIF LATI+G + + P+ Y
Sbjct: 335 SKIFSWLATIYGGTLRWTTPLLY 357
Score = 60.9 bits (141), Expect = 3e-08
Identities = 25/38 (65%), Positives = 33/38 (86%)
Frame = +2
Query: 257 IL*RLGFVFLFTVGGLTGVILANSSIDITLHDTYYVVA 370
+L +GF+ LFT+GG+TGV++ANSS+DI HDTYYVVA
Sbjct: 355 LLYAVGFIVLFTIGGVTGVVIANSSLDIMFHDTYYVVA 392
>UniRef50_Q18JR5 Cluster: Cytochrome-c-like terminal oxidase,
subunit I; n=2; Halobacteriaceae|Rep: Cytochrome-c-like
terminal oxidase, subunit I - Haloquadratum walsbyi
(strain DSM 16790)
Length = 634
Score = 68.9 bits (161), Expect = 1e-10
Identities = 39/102 (38%), Positives = 53/102 (51%), Gaps = 1/102 (0%)
Frame = +2
Query: 230 WNSN*-L*PYIL*RLGFVFLFTVGGLTGVILANSSIDITLHDTYYVVAHFHYVLSXXXXX 406
WN N L +L +GFV F +GG+TGV LA+ +D+ LH TYYVV HFHY++
Sbjct: 412 WNGNIRLTTPMLFSVGFVANFILGGVTGVFLASIPVDLVLHATYYVVGHFHYIVMGAIAF 471
Query: 407 XXXXXXXN*YPLFTGLSLNSYILKIQFFTIFIGVI*HFFLNI 532
+PL+TG + K+ F+ IG FF I
Sbjct: 472 AGFAGIYYWFPLYTGRMYQRTLGKMHFWLSMIGTNITFFAMI 513
Score = 39.9 bits (89), Expect = 0.057
Identities = 18/43 (41%), Positives = 27/43 (62%)
Frame = +3
Query: 99 FIV*AHHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATI 227
F V AHH+F G+D RA F + ++ IAVP+ +K F + T+
Sbjct: 369 FGVWAHHMFATGLDPRLRASFMAVSLAIAVPSAVKTFNWITTM 411
Score = 33.1 bits (72), Expect = 6.5
Identities = 14/33 (42%), Positives = 20/33 (60%)
Frame = +1
Query: 475 KNSIFYNIYWSNITFFPQHFLGLAGIPRRYSDY 573
K + ++ +NITFF LG G+PRRY+ Y
Sbjct: 495 KMHFWLSMIGTNITFFAMILLGYGGMPRRYATY 527
>UniRef50_P98000 Cluster: Alternative cytochrome c oxidase subunit 1
(EC 1.9.3.1) (Alternative cytochrome c oxidase
polypeptide I) (Cytochrome BB3 subunit 1) (Oxidase BB(3)
subunit 1); n=25; Bacteria|Rep: Alternative cytochrome c
oxidase subunit 1 (EC 1.9.3.1) (Alternative cytochrome c
oxidase polypeptide I) (Cytochrome BB3 subunit 1)
(Oxidase BB(3) subunit 1) - Bradyrhizobium japonicum
Length = 591
Score = 68.9 bits (161), Expect = 1e-10
Identities = 34/85 (40%), Positives = 44/85 (51%)
Frame = +2
Query: 269 LGFVFLFTVGGLTGVILANSSIDITLHDTYYVVAHFHYVLSXXXXXXXXXXXXN*YPLFT 448
LGF+ F GGLTG+ L N +D+ L DT +VVAHFH V+ + YP T
Sbjct: 381 LGFIITFVNGGLTGLFLGNVVVDVPLSDTMFVVAHFHMVMGVAPIMVVLGAIYHWYPKVT 440
Query: 449 GLSLNSYILKIQFFTIFIGVI*HFF 523
G LN + K F+ F+G FF
Sbjct: 441 GRMLNDVLGKFHFWVTFLGAYLIFF 465
Score = 39.5 bits (88), Expect = 0.075
Identities = 18/46 (39%), Positives = 30/46 (65%), Gaps = 1/46 (2%)
Frame = +3
Query: 99 FIV*AHHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATI-HG 233
F+V AHH++ G+ +F + T+IIA+PT IK++ + T+ HG
Sbjct: 324 FVVWAHHMYVSGMYPYFGFFFATTTLIIAIPTAIKVYNWVLTLWHG 369
Score = 36.7 bits (81), Expect = 0.53
Identities = 13/24 (54%), Positives = 18/24 (75%)
Frame = +1
Query: 511 ITFFPQHFLGLAGIPRRYSDYPDS 582
+ FFP H+LGL G+PRRY + D+
Sbjct: 462 LIFFPMHYLGLLGVPRRYFELGDA 485
>UniRef50_Q06473 Cluster: Cytochrome c oxidase subunit 1 (EC
1.9.3.1) (Cytochrome c oxidase polypeptide I)
(Cytochrome aa3 subunit 1) (Oxidase aa(3) subunit 1);
n=59; Cyanobacteria|Rep: Cytochrome c oxidase subunit 1
(EC 1.9.3.1) (Cytochrome c oxidase polypeptide I)
(Cytochrome aa3 subunit 1) (Oxidase aa(3) subunit 1) -
Synechocystis sp. (strain PCC 6803)
Length = 551
Score = 68.9 bits (161), Expect = 1e-10
Identities = 32/79 (40%), Positives = 46/79 (58%)
Frame = +2
Query: 272 GFVFLFTVGGLTGVILANSSIDITLHDTYYVVAHFHYVLSXXXXXXXXXXXXN*YPLFTG 451
GF+ F +GGLTGV++A+ DI +HDTY+VV HFHYVL + +P TG
Sbjct: 353 GFLSSFMIGGLTGVMVASVPFDIHVHDTYFVVGHFHYVLFGGSAFALFSGVYHWFPKMTG 412
Query: 452 LSLNSYILKIQFFTIFIGV 508
+N + ++ F FIG+
Sbjct: 413 RMVNEPLGRLHFILTFIGM 431
Score = 49.2 bits (112), Expect = 9e-05
Identities = 25/50 (50%), Positives = 32/50 (64%)
Frame = +3
Query: 102 IV*AHHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYN 251
IV AHH+FT G R +F + T++IAVPTGIKIF T+ G +I N
Sbjct: 296 IVWAHHMFTSGTPGWLRMFFMATTMLIAVPTGIKIFSWCGTLWGGKIQLN 345
>UniRef50_Q9TAP9 Cluster: Cytochrome c oxidase subunit I; n=2;
Toxoplasma gondii|Rep: Cytochrome c oxidase subunit I -
Toxoplasma gondii
Length = 192
Score = 68.5 bits (160), Expect = 1e-10
Identities = 27/41 (65%), Positives = 35/41 (85%)
Frame = +2
Query: 269 LGFVFLFTVGGLTGVILANSSIDITLHDTYYVVAHFHYVLS 391
L F+ LFT+GG TGV++ N+ +DI LHDTYY+VAHFH+VLS
Sbjct: 56 LCFILLFTLGGTTGVVMGNAGMDIALHDTYYIVAHFHFVLS 96
Score = 55.6 bits (128), Expect = 1e-06
Identities = 24/38 (63%), Positives = 31/38 (81%)
Frame = +3
Query: 111 AHHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LAT 224
AHH+ TVG++ DTRAYF++ TI+IA+PTG KIF L T
Sbjct: 2 AHHMMTVGLEGDTRAYFSAMTIMIAIPTGTKIFNWLGT 39
>UniRef50_Q98P35 Cluster: Cytochrome C oxidase subunit I; n=16;
cellular organisms|Rep: Cytochrome C oxidase subunit I -
Rhizobium loti (Mesorhizobium loti)
Length = 623
Score = 66.9 bits (156), Expect = 4e-10
Identities = 33/85 (38%), Positives = 47/85 (55%)
Frame = +2
Query: 269 LGFVFLFTVGGLTGVILANSSIDITLHDTYYVVAHFHYVLSXXXXXXXXXXXXN*YPLFT 448
+GF+ +F +GGLTGV++A+ D +HDTY+VVAHFHYVL +P T
Sbjct: 357 IGFIVVFVIGGLTGVMVASVPFDTQVHDTYFVVAHFHYVLVGGAVFPLLGAIYYWFPKLT 416
Query: 449 GLSLNSYILKIQFFTIFIGVI*HFF 523
G ++ + + F IF G FF
Sbjct: 417 GRMMSETLGRWSFGLIFSGFNLTFF 441
Score = 39.1 bits (87), Expect = 0.099
Identities = 17/38 (44%), Positives = 27/38 (71%)
Frame = +3
Query: 114 HHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATI 227
HH+F G+ ++FT++++ IAVP G++IF LATI
Sbjct: 305 HHMFVAGLPRLGESFFTASSMAIAVPAGLQIFCWLATI 342
Score = 37.1 bits (82), Expect = 0.40
Identities = 16/29 (55%), Positives = 18/29 (62%)
Frame = +1
Query: 508 NITFFPQHFLGLAGIPRRYSDYPDSYMSW 594
N+TFFP H LGL G+PRR Y M W
Sbjct: 437 NLTFFPMHILGLQGMPRRIYTYQPE-MPW 464
>UniRef50_A3ZTG1 Cluster: Cytochrome c oxidase subunit I; n=1;
Blastopirellula marina DSM 3645|Rep: Cytochrome c
oxidase subunit I - Blastopirellula marina DSM 3645
Length = 595
Score = 66.9 bits (156), Expect = 4e-10
Identities = 33/85 (38%), Positives = 46/85 (54%)
Frame = +2
Query: 269 LGFVFLFTVGGLTGVILANSSIDITLHDTYYVVAHFHYVLSXXXXXXXXXXXXN*YPLFT 448
L FV +F +GGL+G+ +A + +DI +HDTY++VAHFHYVL +P
Sbjct: 390 LSFVSMFVIGGLSGIFMAATPVDIVIHDTYFIVAHFHYVLFAGTAMAVFGSIYFWFPKMF 449
Query: 449 GLSLNSYILKIQFFTIFIGVI*HFF 523
G +N KI F FI + FF
Sbjct: 450 GRMMNETAGKIHFALTFIFLNGTFF 474
Score = 41.9 bits (94), Expect = 0.014
Identities = 18/50 (36%), Positives = 31/50 (62%)
Frame = +3
Query: 99 FIV*AHHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINY 248
FIV HH+F G++ F AT++IA+P+ +K F L T++G ++ +
Sbjct: 333 FIVWGHHMFVSGMNPGLGMTFMVATMMIALPSAVKTFNWLGTVYGGKVQF 382
>UniRef50_Q4XXN6 Cluster: Putative uncharacterized protein; n=1;
Plasmodium chabaudi|Rep: Putative uncharacterized
protein - Plasmodium chabaudi
Length = 329
Score = 66.9 bits (156), Expect = 4e-10
Identities = 34/80 (42%), Positives = 45/80 (56%), Gaps = 1/80 (1%)
Frame = +2
Query: 275 FVFLFTVGGLTGVILANSSIDITLHDTYYVVAHFHYVLSXXXXXXXXXXXXN*YPLFTGL 454
F+ FT GG TGVIL N +ID+ LHDTYYV+AHFH+VLS F G
Sbjct: 54 FICTFTFGGTTGVILGNGAIDVALHDTYYVIAHFHFVLSIGAIIALFTSVSFFQESFFGK 113
Query: 455 SL-NSYILKIQFFTIFIGVI 511
+L + I+ + F+GV+
Sbjct: 114 TLRENTIIVLWSILFFVGVV 133
Score = 51.2 bits (117), Expect = 2e-05
Identities = 20/39 (51%), Positives = 30/39 (76%)
Frame = +3
Query: 120 IFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGT 236
++T G+++DTRA+FTS TI+I++PTG K+F L T T
Sbjct: 1 MYTTGLEVDTRAFFTSTTILISIPTGTKVFNWLCTYMST 39
Score = 40.3 bits (90), Expect = 0.043
Identities = 15/28 (53%), Positives = 18/28 (64%)
Frame = +1
Query: 511 ITFFPQHFLGLAGIPRRYSDYPDSYMSW 594
+TF P HFLG +PRR DYPD+ W
Sbjct: 134 LTFLPMHFLGFNVMPRRIPDYPDALNGW 161
>UniRef50_Q02766 Cluster: Cytochrome c oxidase subunit 1; n=107;
Alveolata|Rep: Cytochrome c oxidase subunit 1 -
Plasmodium falciparum
Length = 476
Score = 66.9 bits (156), Expect = 4e-10
Identities = 27/39 (69%), Positives = 33/39 (84%)
Frame = +2
Query: 275 FVFLFTVGGLTGVILANSSIDITLHDTYYVVAHFHYVLS 391
F+ FT GG TGVIL N++ID+ LHDTYYV+AHFH+VLS
Sbjct: 350 FICTFTFGGTTGVILGNAAIDVALHDTYYVIAHFHFVLS 388
Score = 58.4 bits (135), Expect = 2e-07
Identities = 22/41 (53%), Positives = 33/41 (80%)
Frame = +3
Query: 102 IV*AHHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LAT 224
+V HH++T G+++DTRAYFTS TI+I++PTG K+F + T
Sbjct: 291 LVWVHHMYTTGLEVDTRAYFTSTTILISIPTGTKVFNWICT 331
Score = 40.3 bits (90), Expect = 0.043
Identities = 15/28 (53%), Positives = 18/28 (64%)
Frame = +1
Query: 511 ITFFPQHFLGLAGIPRRYSDYPDSYMSW 594
+TF P HFLG +PRR DYPD+ W
Sbjct: 430 LTFLPMHFLGFNVMPRRIPDYPDALNGW 457
>UniRef50_Q1IUK7 Cluster: Cytochrome-c oxidase; n=2;
Acidobacteria|Rep: Cytochrome-c oxidase - Acidobacteria
bacterium (strain Ellin345)
Length = 595
Score = 66.1 bits (154), Expect = 8e-10
Identities = 33/79 (41%), Positives = 43/79 (54%)
Frame = +2
Query: 269 LGFVFLFTVGGLTGVILANSSIDITLHDTYYVVAHFHYVLSXXXXXXXXXXXXN*YPLFT 448
LGF+ +F GG++G LA SIDI LH TY+VV HFH V+ +P T
Sbjct: 389 LGFISMFVSGGVSGFFLAQPSIDIYLHATYFVVGHFHLVMGVAAIFGVFAGTYFWFPKMT 448
Query: 449 GLSLNSYILKIQFFTIFIG 505
G +N + KI F+ FIG
Sbjct: 449 GHMMNETLGKIHFWGTFIG 467
>UniRef50_Q9ZZX1 Cluster: Intron-encoded DNA endonuclease aI5 alpha
precursor (DNA endonuclease I-SceIV) [Contains:
Truncated non-functional cytochrome oxidase 1; DNA
endonuclease aI5 alpha (EC 3.1.-.-) (Intron-encoded
endonuclease I- SceIV)]; n=2; Saccharomycetales|Rep:
Intron-encoded DNA endonuclease aI5 alpha precursor (DNA
endonuclease I-SceIV) [Contains: Truncated
non-functional cytochrome oxidase 1; DNA endonuclease
aI5 alpha (EC 3.1.-.-) (Intron-encoded endonuclease I-
SceIV)] - Saccharomyces cerevisiae (Baker's yeast)
Length = 630
Score = 65.7 bits (153), Expect = 1e-09
Identities = 32/67 (47%), Positives = 42/67 (62%)
Frame = +3
Query: 9 AHIISQERGKKETFXXXXXXXXXXXXXXXXFIV*AHHIFTVGIDIDTRAYFTSATIIIAV 188
+H++S KK F F+V +HH++ VG+D DTRAYFTSAT+IIA+
Sbjct: 256 SHVVSTY-SKKPVFGEISMVYAMASIGLLGFLVWSHHMYIVGLDADTRAYFTSATMIIAI 314
Query: 189 PTGIKIF 209
PTGIKIF
Sbjct: 315 PTGIKIF 321
>UniRef50_A0TRU9 Cluster: Cytochrome-c oxidase; n=30;
Proteobacteria|Rep: Cytochrome-c oxidase - Burkholderia
cenocepacia MC0-3
Length = 1004
Score = 65.3 bits (152), Expect = 1e-09
Identities = 33/84 (39%), Positives = 45/84 (53%)
Frame = +2
Query: 272 GFVFLFTVGGLTGVILANSSIDITLHDTYYVVAHFHYVLSXXXXXXXXXXXXN*YPLFTG 451
GFV +F VGG++GV+ A +D L DTY+VVAH HYVL +P FTG
Sbjct: 378 GFVLMFVVGGVSGVMTAAVPLDWQLTDTYFVVAHLHYVLLGINVFPVLGGVAYWFPKFTG 437
Query: 452 LSLNSYILKIQFFTIFIGVI*HFF 523
+N K+ F+ + +G FF
Sbjct: 438 RMMNERFGKLTFWVVLVGFNLGFF 461
Score = 38.3 bits (85), Expect = 0.17
Identities = 19/56 (33%), Positives = 32/56 (57%), Gaps = 1/56 (1%)
Frame = +3
Query: 99 FIV*AHHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATI-HGTQINYNPIFY 263
F V HH+F GI A+F +A+++I++P+ + +F +ATI G + P Y
Sbjct: 320 FEVWVHHMFATGIAPLALAFFGAASMLISIPSAVAVFAWIATIWTGRPVFRTPFLY 375
Score = 36.3 bits (80), Expect = 0.70
Identities = 16/29 (55%), Positives = 18/29 (62%)
Frame = +1
Query: 508 NITFFPQHFLGLAGIPRRYSDYPDSYMSW 594
N+ FFP H GL G+PRR YP S M W
Sbjct: 457 NLGFFPMHISGLLGMPRRIYTYP-SGMGW 484
>UniRef50_Q9XKD7 Cluster: Cytochrome c oxidase subunit I; n=1;
Dicyema misakiense|Rep: Cytochrome c oxidase subunit I -
Dicyema misakiense
Length = 473
Score = 65.3 bits (152), Expect = 1e-09
Identities = 28/42 (66%), Positives = 38/42 (90%)
Frame = +3
Query: 102 IV*AHHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATI 227
+V AHH++T G+DIDTR+YFT+AT+IIAVPTGIKIF L+++
Sbjct: 269 VVWAHHMYTAGLDIDTRSYFTAATMIIAVPTGIKIFTWLSSL 310
Score = 59.7 bits (138), Expect = 7e-08
Identities = 23/42 (54%), Positives = 34/42 (80%)
Frame = +2
Query: 266 RLGFVFLFTVGGLTGVILANSSIDITLHDTYYVVAHFHYVLS 391
++ F+ F +GG +G+IL+N+S+D LHDTYYVVAHFH V++
Sbjct: 325 QVSFIVSFAIGGTSGIILSNASVDHYLHDTYYVVAHFHIVVA 366
Score = 33.1 bits (72), Expect = 6.5
Identities = 20/55 (36%), Positives = 30/55 (54%)
Frame = +1
Query: 418 GIY*LISFIYRPFIKFLYTKNSIFYNIYWSNITFFPQHFLGLAGIPRRYSDYPDS 582
G+Y L S++ PF L S+F ++ S F QHF G + +PRRY + D+
Sbjct: 376 GLYYLSSYLSLPFSLPLSGYASLF--VFSSFSVFALQHFQGYSAMPRRYFMHSDT 428
>UniRef50_P33518 Cluster: Cytochrome c oxidase polypeptide 1; n=4;
Halobacteriaceae|Rep: Cytochrome c oxidase polypeptide 1
- Halobacterium salinarium (Halobacterium halobium)
Length = 593
Score = 64.5 bits (150), Expect = 2e-09
Identities = 30/79 (37%), Positives = 42/79 (53%)
Frame = +2
Query: 269 LGFVFLFTVGGLTGVILANSSIDITLHDTYYVVAHFHYVLSXXXXXXXXXXXXN*YPLFT 448
+GFV F +GG+TGV LA ID+ LHDTYYVV HFH+++ +P+ T
Sbjct: 395 IGFVQNFIIGGVTGVFLAVIPIDLILHDTYYVVGHFHFIVYGAIGFALFAASYYWFPMVT 454
Query: 449 GLSLNSYILKIQFFTIFIG 505
G + F+T +G
Sbjct: 455 GRMYQKRLAHAHFWTALVG 473
Score = 41.5 bits (93), Expect = 0.019
Identities = 17/43 (39%), Positives = 29/43 (67%)
Frame = +3
Query: 99 FIV*AHHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATI 227
F V AHH+FT GID R+ F + ++ I++P+ +K+F + T+
Sbjct: 338 FGVWAHHMFTTGIDPRIRSSFMAVSLAISIPSAVKVFNWITTM 380
>UniRef50_A6C0L1 Cluster: Cytochrome c oxidase subunit I; n=1;
Planctomyces maris DSM 8797|Rep: Cytochrome c oxidase
subunit I - Planctomyces maris DSM 8797
Length = 606
Score = 64.1 bits (149), Expect = 3e-09
Identities = 30/85 (35%), Positives = 44/85 (51%)
Frame = +2
Query: 269 LGFVFLFTVGGLTGVILANSSIDITLHDTYYVVAHFHYVLSXXXXXXXXXXXXN*YPLFT 448
+ F+ +F VGGL+G+ +A +D+ HDTY++VAHFHY+L +P
Sbjct: 393 IAFLSMFIVGGLSGIFMAAVPVDVYFHDTYFIVAHFHYILFGATLFGVFAGIQFWFPKMF 452
Query: 449 GLSLNSYILKIQFFTIFIGVI*HFF 523
G +N + K F FIG FF
Sbjct: 453 GRMMNEKLGKTHFVLTFIGANGTFF 477
Score = 44.4 bits (100), Expect = 0.003
Identities = 21/53 (39%), Positives = 33/53 (62%)
Frame = +3
Query: 99 FIV*AHHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPI 257
FIV HH+FT G++ F +T++IA+P+ IK F ATI G ++ +N +
Sbjct: 336 FIVWGHHMFTSGMNPAVGMAFMVSTMMIALPSAIKTFNWTATIWGGKLEFNTV 388
Score = 40.7 bits (91), Expect = 0.033
Identities = 17/29 (58%), Positives = 22/29 (75%), Gaps = 1/29 (3%)
Frame = +1
Query: 505 SNITFFPQHFLGLAGIPRRYSD-YPDSYM 588
+N TFFP HFLG+ G+PRRY+D Y Y+
Sbjct: 472 ANGTFFPMHFLGMQGMPRRYADPYLHGYL 500
>UniRef50_P24010 Cluster: Cytochrome c oxidase subunit 1 (EC
1.9.3.1) (Cytochrome c oxidase polypeptide I)
(Cytochrome aa3 subunit 1) (Caa-3605 subunit 1) (Oxidase
aa(3) subunit 1); n=13; Bacillaceae|Rep: Cytochrome c
oxidase subunit 1 (EC 1.9.3.1) (Cytochrome c oxidase
polypeptide I) (Cytochrome aa3 subunit 1) (Caa-3605
subunit 1) (Oxidase aa(3) subunit 1) - Bacillus subtilis
Length = 622
Score = 64.1 bits (149), Expect = 3e-09
Identities = 34/89 (38%), Positives = 47/89 (52%)
Frame = +2
Query: 269 LGFVFLFTVGGLTGVILANSSIDITLHDTYYVVAHFHYVLSXXXXXXXXXXXXN*YPLFT 448
+ F+ F +GG+TGV+LA ++ D HDTY+VVAHFHYV+ +P
Sbjct: 350 VSFIPSFVLGGVTGVMLAAAAADYQFHDTYFVVAHFHYVIIGGVVFGLLAGVHFWWPKMF 409
Query: 449 GLSLNSYILKIQFFTIFIGVI*HFFLNIF 535
G L+ + KI F FIG FF+ F
Sbjct: 410 GKILHETMGKISFVLFFIGFHLTFFIQHF 438
Score = 52.4 bits (120), Expect = 1e-05
Identities = 25/50 (50%), Positives = 31/50 (62%)
Frame = +3
Query: 99 FIV*AHHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINY 248
F+V HH+FT G+ A F AT+ IA+PTGIKIF L TI G + Y
Sbjct: 293 FMVWVHHMFTTGLGPIANAIFAVATMAIAIPTGIKIFNWLLTIWGGNVKY 342
>UniRef50_O67935 Cluster: Cytochrome c oxidase subunit I; n=1;
Aquifex aeolicus|Rep: Cytochrome c oxidase subunit I -
Aquifex aeolicus
Length = 485
Score = 63.7 bits (148), Expect = 4e-09
Identities = 33/88 (37%), Positives = 48/88 (54%)
Frame = +2
Query: 269 LGFVFLFTVGGLTGVILANSSIDITLHDTYYVVAHFHYVLSXXXXXXXXXXXXN*YPLFT 448
LG VF+F +GGLTG+ L +ID+ + D+ +VV HFHYVL + +PL T
Sbjct: 297 LGGVFMFLIGGLTGLPLGMVAIDLGVSDSLFVVGHFHYVLGMAITLGILGAVIHWFPLAT 356
Query: 449 GLSLNSYILKIQFFTIFIGVI*HFFLNI 532
G + K+ F+ IF G +FL +
Sbjct: 357 GKYYPENLGKLSFWLIFAGANIFYFLQM 384
Score = 46.4 bits (105), Expect = 7e-04
Identities = 21/50 (42%), Positives = 32/50 (64%)
Frame = +3
Query: 99 FIV*AHHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINY 248
F + HH+F G+ TR F+ T++IAVPTGIKIF + T++ I++
Sbjct: 240 FFLWIHHMFVSGVPNWTRVLFSYTTLLIAVPTGIKIFNWMLTLYRGAIHF 289
>UniRef50_A7HEB5 Cluster: Cytochrome-c oxidase; n=2;
Cystobacterineae|Rep: Cytochrome-c oxidase -
Anaeromyxobacter sp. Fw109-5
Length = 596
Score = 63.7 bits (148), Expect = 4e-09
Identities = 31/80 (38%), Positives = 45/80 (56%)
Frame = +2
Query: 269 LGFVFLFTVGGLTGVILANSSIDITLHDTYYVVAHFHYVLSXXXXXXXXXXXXN*YPLFT 448
LG VF+F VGGLTG+ L + S+D+ LHDT +VV HFH+ ++ +P
Sbjct: 379 LGTVFVFGVGGLTGLFLGDISMDLYLHDTMFVVGHFHFTMAAASVMGAFTGIYFWFPKMF 438
Query: 449 GLSLNSYILKIQFFTIFIGV 508
G L + KI F+ F+G+
Sbjct: 439 GRRLGERLGKIHFWFTFLGL 458
>UniRef50_A0VUI8 Cluster: Cytochrome-c oxidase; n=1; Dinoroseobacter
shibae DFL 12|Rep: Cytochrome-c oxidase -
Dinoroseobacter shibae DFL 12
Length = 853
Score = 63.7 bits (148), Expect = 4e-09
Identities = 32/86 (37%), Positives = 48/86 (55%)
Frame = +2
Query: 269 LGFVFLFTVGGLTGVILANSSIDITLHDTYYVVAHFHYVLSXXXXXXXXXXXXN*YPLFT 448
LGF+F+F +GG+TGV++A ++ HD+Y+VVAH HYVL P FT
Sbjct: 383 LGFLFIFVLGGMTGVMVAAVPFNLQAHDSYFVVAHLHYVLIGGMVFPMFGALYYWVPHFT 442
Query: 449 GLSLNSYILKIQFFTIFIGVI*HFFL 526
G ++ + K F+ +F G FF+
Sbjct: 443 GRMMSERLGKWVFWLMFSGFNLAFFM 468
Score = 42.3 bits (95), Expect = 0.011
Identities = 17/39 (43%), Positives = 30/39 (76%)
Frame = +3
Query: 111 AHHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATI 227
AHH+F G+ I + + F++A+ ++AVPTG++IF +AT+
Sbjct: 330 AHHMFATGLPILSLSLFSAASTMVAVPTGVQIFCFIATL 368
Score = 35.5 bits (78), Expect = 1.2
Identities = 16/46 (34%), Positives = 25/46 (54%), Gaps = 1/46 (2%)
Frame = +1
Query: 508 NITFFPQHFLGLAGIPRRYSDYPDSYMSW-KYNFLH*VHIFLYVSG 642
N+ FF H G+ G+PRR + YP + W + N L + F+ +G
Sbjct: 463 NLAFFMMHLTGMRGMPRRVATYPGG-IGWDRLNMLSTIGAFILAAG 507
>UniRef50_P14544 Cluster: Cytochrome c oxidase subunit 1; n=7;
Eukaryota|Rep: Cytochrome c oxidase subunit 1 -
Leishmania tarentolae (Sauroleishmania tarentolae)
Length = 549
Score = 63.7 bits (148), Expect = 4e-09
Identities = 25/39 (64%), Positives = 32/39 (82%)
Frame = +2
Query: 275 FVFLFTVGGLTGVILANSSIDITLHDTYYVVAHFHYVLS 391
F+F+F +G +TG+ L+N IDI LHDTY+VV HFHYVLS
Sbjct: 346 FIFMFLIGAVTGLFLSNVGIDIMLHDTYFVVGHFHYVLS 384
Score = 48.8 bits (111), Expect = 1e-04
Identities = 18/33 (54%), Positives = 27/33 (81%)
Frame = +3
Query: 111 AHHIFTVGIDIDTRAYFTSATIIIAVPTGIKIF 209
AHH+F VG+D+D+RAYF +I+I +PT +K+F
Sbjct: 291 AHHMFVVGMDVDSRAYFGGVSILIGLPTCVKLF 323
Score = 44.8 bits (101), Expect = 0.002
Identities = 18/36 (50%), Positives = 23/36 (63%)
Frame = +1
Query: 505 SNITFFPQHFLGLAGIPRRYSDYPDSYMSWKYNFLH 612
SN+ FFP H LG+ PRR SDYP S++ W L+
Sbjct: 423 SNMLFFPMHSLGMYAFPRRISDYPVSFLFWSSFMLY 458
>UniRef50_Q8SK39 Cluster: Cytochrome c oxidase subunit I; n=455;
cellular organisms|Rep: Cytochrome c oxidase subunit I -
Pandaka lidwilli
Length = 507
Score = 62.9 bits (146), Expect = 7e-09
Identities = 24/29 (82%), Positives = 27/29 (93%)
Frame = +1
Query: 508 NITFFPQHFLGLAGIPRRYSDYPDSYMSW 594
N+TFFPQHFLGLAG+PRRYSDYPD+Y W
Sbjct: 411 NLTFFPQHFLGLAGMPRRYSDYPDAYTLW 439
>UniRef50_P98005 Cluster: Cytochrome c oxidase polypeptide I+III (EC
1.9.3.1) (Cytochrome c aa(3) subunit 1); n=2; Thermus
thermophilus|Rep: Cytochrome c oxidase polypeptide I+III
(EC 1.9.3.1) (Cytochrome c aa(3) subunit 1) - Thermus
thermophilus (strain HB8 / ATCC 27634 / DSM 579)
Length = 791
Score = 62.1 bits (144), Expect = 1e-08
Identities = 28/81 (34%), Positives = 45/81 (55%)
Frame = +2
Query: 269 LGFVFLFTVGGLTGVILANSSIDITLHDTYYVVAHFHYVLSXXXXXXXXXXXXN*YPLFT 448
LGF+F F +GG+TGV+L+ + +D HD+Y+VVAHFH VL +P T
Sbjct: 351 LGFIFNFLLGGITGVMLSMTPLDYQFHDSYFVVAHFHNVLMAGSGFGAFAGLYYWWPKMT 410
Query: 449 GLSLNSYILKIQFFTIFIGVI 511
G + + ++ F+ +G +
Sbjct: 411 GRMYDERLGRLHFWLFLVGYL 431
Score = 43.2 bits (97), Expect = 0.006
Identities = 21/54 (38%), Positives = 31/54 (57%)
Frame = +3
Query: 102 IV*AHHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPIFY 263
+V AHH+FTVG + F T +IAVPTG+K+F + T+ G ++ Y
Sbjct: 295 MVWAHHMFTVGESTLFQIAFAFFTALIAVPTGVKLFNIIGTLWGGKLQMKTPLY 348
Score = 33.5 bits (73), Expect = 4.9
Identities = 13/28 (46%), Positives = 16/28 (57%)
Frame = +1
Query: 511 ITFFPQHFLGLAGIPRRYSDYPDSYMSW 594
+TF PQ+ LG G+PRRY Y W
Sbjct: 432 LTFLPQYALGYLGMPRRYYTYNADIAGW 459
>UniRef50_Q79VD7 Cluster: Cytochrome c oxidase subunit 1; n=93;
Actinobacteria (class)|Rep: Cytochrome c oxidase subunit
1 - Corynebacterium glutamicum (Brevibacterium flavum)
Length = 584
Score = 61.3 bits (142), Expect = 2e-08
Identities = 28/79 (35%), Positives = 44/79 (55%)
Frame = +2
Query: 269 LGFVFLFTVGGLTGVILANSSIDITLHDTYYVVAHFHYVLSXXXXXXXXXXXXN*YPLFT 448
+GF+ F GGLTG++LA+ +D L D+Y+++AHFHY L +P T
Sbjct: 364 VGFMATFLFGGLTGIMLASPPLDFHLADSYFLIAHFHYTLFGTVVFASCAGVYFWFPKMT 423
Query: 449 GLSLNSYILKIQFFTIFIG 505
G ++ + KI F+ F+G
Sbjct: 424 GRMMDERLGKIHFWLTFVG 442
Score = 37.1 bits (82), Expect = 0.40
Identities = 19/39 (48%), Positives = 24/39 (61%)
Frame = +1
Query: 514 TFFPQHFLGLAGIPRRYSDYPDSYMSWKYNFLH*VHIFL 630
TF QH++G G+PRRY+DY DS YN + V FL
Sbjct: 446 TFLIQHWVGNMGMPRRYADYLDSDGFTIYNQISTVFSFL 484
Score = 33.5 bits (73), Expect = 4.9
Identities = 15/39 (38%), Positives = 24/39 (61%)
Frame = +3
Query: 111 AHHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATI 227
AHH+F G + +F+ T +I+VPTG+K F + T+
Sbjct: 313 AHHMFVTGAVL--LPFFSFMTFLISVPTGVKFFNWVGTM 349
>UniRef50_A6C5X9 Cluster: Cytochrome caa3 oxidase; n=3;
Bacteria|Rep: Cytochrome caa3 oxidase - Planctomyces
maris DSM 8797
Length = 754
Score = 60.9 bits (141), Expect = 3e-08
Identities = 32/79 (40%), Positives = 42/79 (53%)
Frame = +2
Query: 269 LGFVFLFTVGGLTGVILANSSIDITLHDTYYVVAHFHYVLSXXXXXXXXXXXXN*YPLFT 448
+ F+ F +GGLTG++ A ID L DTY+VVAHFHYVL +P T
Sbjct: 360 VAFLLQFVIGGLTGIMFAAVPIDWQLTDTYFVVAHFHYVLIGGLVFALFSAAYYWFPKMT 419
Query: 449 GLSLNSYILKIQFFTIFIG 505
G LN I +QF+ +G
Sbjct: 420 GRMLNERIGILQFWLWVLG 438
Score = 50.4 bits (115), Expect = 4e-05
Identities = 20/47 (42%), Positives = 32/47 (68%)
Frame = +3
Query: 111 AHHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYN 251
AHH+F VG+ + +F +++IA+PTGIK+F AT+ G +I +N
Sbjct: 307 AHHMFAVGLGMYADIFFAVGSLLIAIPTGIKVFNWTATLWGGEIQFN 353
Score = 36.7 bits (81), Expect = 0.53
Identities = 15/25 (60%), Positives = 18/25 (72%)
Frame = +1
Query: 508 NITFFPQHFLGLAGIPRRYSDYPDS 582
N+TF QHFLGL G+PRR Y D+
Sbjct: 440 NMTFMVQHFLGLMGMPRRVYTYADN 464
>UniRef50_A5UVJ0 Cluster: Cytochrome-c oxidase; n=2;
Roseiflexus|Rep: Cytochrome-c oxidase - Roseiflexus sp.
RS-1
Length = 641
Score = 60.5 bits (140), Expect = 4e-08
Identities = 31/85 (36%), Positives = 46/85 (54%)
Frame = +2
Query: 269 LGFVFLFTVGGLTGVILANSSIDITLHDTYYVVAHFHYVLSXXXXXXXXXXXXN*YPLFT 448
+GF+ +F +GG++GV LA+ I++ D+YYVVAH HYVL +P T
Sbjct: 359 IGFISMFIIGGISGVTLASPPINVQQTDSYYVVAHMHYVLFGGAIQGIFAGIFYWFPKMT 418
Query: 449 GLSLNSYILKIQFFTIFIGVI*HFF 523
G L+ + K QF+ + I FF
Sbjct: 419 GRMLDERLGKWQFWLMLISFNLTFF 443
Score = 51.6 bits (118), Expect = 2e-05
Identities = 24/49 (48%), Positives = 34/49 (69%)
Frame = +3
Query: 99 FIV*AHHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQIN 245
F+V AHH+F VG+ A+F +A+ +IAVPTG+KIF LAT+ +N
Sbjct: 302 FLVWAHHMFAVGLGPLANAFFGAASFLIAVPTGVKIFNWLATMWQGSLN 350
Score = 35.1 bits (77), Expect = 1.6
Identities = 15/29 (51%), Positives = 19/29 (65%)
Frame = +1
Query: 508 NITFFPQHFLGLAGIPRRYSDYPDSYMSW 594
N+TFFP H G AG+PRR Y ++ M W
Sbjct: 439 NLTFFPMHLSGNAGMPRRIYTY-EADMGW 466
>UniRef50_Q36097 Cluster: Cytochrome c oxidase subunit 1; n=3;
Theileria|Rep: Cytochrome c oxidase subunit 1 -
Theileria parva
Length = 481
Score = 60.5 bits (140), Expect = 4e-08
Identities = 24/39 (61%), Positives = 30/39 (76%)
Frame = +2
Query: 275 FVFLFTVGGLTGVILANSSIDITLHDTYYVVAHFHYVLS 391
F+ F +GG TGV+L N+ ID+ LHDT YVV HFH+VLS
Sbjct: 350 FIVNFVIGGTTGVVLGNAGIDLALHDTVYVVGHFHFVLS 388
Score = 41.5 bits (93), Expect = 0.019
Identities = 14/30 (46%), Positives = 18/30 (60%)
Frame = +1
Query: 511 ITFFPQHFLGLAGIPRRYSDYPDSYMSWKY 600
+TF P HF G + +PRR DYPD W +
Sbjct: 430 LTFLPMHFTGFSPLPRRIPDYPDEMWGWNF 459
Score = 33.5 bits (73), Expect = 4.9
Identities = 14/24 (58%), Positives = 19/24 (79%)
Frame = +3
Query: 156 YFTSATIIIAVPTGIKIFR*LATI 227
YFT+ TI+IA+PTG KIF + T+
Sbjct: 309 YFTTVTILIALPTGNKIFNWVTTL 332
>UniRef50_P34956 Cluster: Quinol oxidase subunit 1 (EC 1.10.3.-)
(Quinol oxidase polypeptide I) (Quinol oxidase aa3-600,
subunit qoxB) (Oxidase aa(3)-600 subunit 1); n=45;
Bacillales|Rep: Quinol oxidase subunit 1 (EC 1.10.3.-)
(Quinol oxidase polypeptide I) (Quinol oxidase aa3-600,
subunit qoxB) (Oxidase aa(3)-600 subunit 1) - Bacillus
subtilis
Length = 649
Score = 60.1 bits (139), Expect = 5e-08
Identities = 34/89 (38%), Positives = 45/89 (50%)
Frame = +2
Query: 269 LGFVFLFTVGGLTGVILANSSIDITLHDTYYVVAHFHYVLSXXXXXXXXXXXXN*YPLFT 448
L F+ F +GG+TGV+LA ++ D H+TY++V+HFHYVL YP
Sbjct: 381 LAFIPNFVIGGVTGVMLAMAAADYQYHNTYFLVSHFHYVLIAGTVFACFAGFIFWYPKMF 440
Query: 449 GLSLNSYILKIQFFTIFIGVI*HFFLNIF 535
G LN I K F+ IG FF F
Sbjct: 441 GHKLNERIGKWFFWIFMIGFNICFFPQYF 469
Score = 47.2 bits (107), Expect = 4e-04
Identities = 19/50 (38%), Positives = 33/50 (66%)
Frame = +3
Query: 99 FIV*AHHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINY 248
F+V HH FT+G ++F+ T+ I++PTG+KIF L T++ +I++
Sbjct: 324 FLVWTHHFFTMGNSASVNSFFSITTMAISIPTGVKIFNWLFTMYKGRISF 373
Score = 37.9 bits (84), Expect = 0.23
Identities = 19/41 (46%), Positives = 24/41 (58%)
Frame = +1
Query: 508 NITFFPQHFLGLAGIPRRYSDYPDSYMSWKYNFLH*VHIFL 630
NI FFPQ+FLGL G+PRR Y + NF+ V F+
Sbjct: 461 NICFFPQYFLGLQGMPRRIYTYGPNDGWTTLNFISTVGAFM 501
>UniRef50_Q67ML1 Cluster: Cytochrome C oxidase subunit I; n=17;
Bacteria|Rep: Cytochrome C oxidase subunit I -
Symbiobacterium thermophilum
Length = 628
Score = 58.8 bits (136), Expect = 1e-07
Identities = 30/79 (37%), Positives = 42/79 (53%)
Frame = +2
Query: 269 LGFVFLFTVGGLTGVILANSSIDITLHDTYYVVAHFHYVLSXXXXXXXXXXXXN*YPLFT 448
+GF+ FT+GGL+G + A + D HDTY+VVAHFHYVL + +P
Sbjct: 361 IGFIASFTIGGLSGFMHAAAPSDAQQHDTYFVVAHFHYVLIGGSIFAILSGIHHWFPKVF 420
Query: 449 GLSLNSYILKIQFFTIFIG 505
G L+ + + F IF G
Sbjct: 421 GRMLDERLGRWSFALIFTG 439
Score = 51.2 bits (117), Expect = 2e-05
Identities = 24/50 (48%), Positives = 34/50 (68%)
Frame = +3
Query: 99 FIV*AHHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINY 248
F V +HH+FTVG+ + F+ T+ IAVPTG+KIF L+T+ G QI +
Sbjct: 304 FTVWSHHMFTVGMGPVVNSIFSLTTMAIAVPTGVKIFNWLSTMWGGQIRF 353
Score = 33.9 bits (74), Expect = 3.7
Identities = 17/42 (40%), Positives = 24/42 (57%), Gaps = 1/42 (2%)
Frame = +1
Query: 520 FPQHFLGLAGIPRRYSDYPDSYMSWK-YNFLH*VHIFLYVSG 642
FP H LGL G+PRR Y + W+ +N L V +F+ +G
Sbjct: 445 FPFHILGLLGMPRRIYTYAPG-LGWENWNLLSTVGVFILAAG 485
>UniRef50_Q5V018 Cluster: Cytochrome c oxidase subunit I; n=3;
Halobacteriaceae|Rep: Cytochrome c oxidase subunit I -
Haloarcula marismortui (Halobacterium marismortui)
Length = 854
Score = 58.8 bits (136), Expect = 1e-07
Identities = 32/79 (40%), Positives = 40/79 (50%)
Frame = +2
Query: 269 LGFVFLFTVGGLTGVILANSSIDITLHDTYYVVAHFHYVLSXXXXXXXXXXXXN*YPLFT 448
LG + LF +GG+TGV L +D TY+VVAHFHYV+ YP T
Sbjct: 363 LGALILFIIGGITGVFLGAIVLDYQFRGTYWVVAHFHYVM-VAGATALFGGLYYWYPKIT 421
Query: 449 GLSLNSYILKIQFFTIFIG 505
G N + KIQF F+G
Sbjct: 422 GKMYNETLGKIQFGVYFLG 440
Score = 35.1 bits (77), Expect = 1.6
Identities = 15/54 (27%), Positives = 30/54 (55%)
Frame = +3
Query: 99 FIV*AHHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPIF 260
F+V HH+F GI++ + F + TI I++P + +F + T+ ++ + F
Sbjct: 306 FVVWMHHMFLTGINLPIKTIFMATTIGISLPFDLMVFSLIYTMAKGRVRFTTPF 359
>UniRef50_Q0I8U1 Cluster: Cytochrome c oxidase subunit I; n=16;
Bacteria|Rep: Cytochrome c oxidase subunit I -
Synechococcus sp. (strain CC9311)
Length = 564
Score = 58.0 bits (134), Expect = 2e-07
Identities = 30/79 (37%), Positives = 42/79 (53%)
Frame = +2
Query: 269 LGFVFLFTVGGLTGVILANSSIDITLHDTYYVVAHFHYVLSXXXXXXXXXXXXN*YPLFT 448
+G + F G+TGV+LA IDI + +TY+VVAHFHYV+ + +P FT
Sbjct: 367 IGGLINFIFAGITGVMLATVPIDIHVGNTYFVVAHFHYVIFNTIVFGVFAGIYHWFPKFT 426
Query: 449 GLSLNSYILKIQFFTIFIG 505
G + K+ F FIG
Sbjct: 427 GKMYYEGLGKVHFVLTFIG 445
Score = 41.5 bits (93), Expect = 0.019
Identities = 20/50 (40%), Positives = 28/50 (56%)
Frame = +3
Query: 102 IV*AHHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYN 251
IV AHH+F G R F T++IA+PTG+K+F L T+ + N
Sbjct: 311 IVWAHHMFYTGTPNWMRHIFMFTTMLIAIPTGVKVFAWLGTLWAGNLRLN 360
>UniRef50_A4WT83 Cluster: Cytochrome c, monohaem; n=3;
Rhodobacteraceae|Rep: Cytochrome c, monohaem -
Rhodobacter sphaeroides ATCC 17025
Length = 878
Score = 58.0 bits (134), Expect = 2e-07
Identities = 28/78 (35%), Positives = 43/78 (55%)
Frame = +2
Query: 272 GFVFLFTVGGLTGVILANSSIDITLHDTYYVVAHFHYVLSXXXXXXXXXXXXN*YPLFTG 451
G + +FT GGLTGV++A + D +HDTY++VAH HY L YP+ T
Sbjct: 384 GGLAVFTAGGLTGVMVAIAPFDWQVHDTYFIVAHLHYTLFGGMVFPIIAGVYYFYPVITK 443
Query: 452 LSLNSYILKIQFFTIFIG 505
+L+ + + F+ +F G
Sbjct: 444 KALSERLGRWSFWLLFTG 461
Score = 39.1 bits (87), Expect = 0.099
Identities = 18/46 (39%), Positives = 26/46 (56%), Gaps = 1/46 (2%)
Frame = +1
Query: 508 NITFFPQHFLGLAGIPRRYSDYPDSYMSWKY-NFLH*VHIFLYVSG 642
N+TF P H GL G+PRR YP ++ W + N + V F+ +G
Sbjct: 463 NVTFLPMHLTGLKGMPRRVFTYP-GHVGWDWLNLISTVGAFVMAAG 507
Score = 38.3 bits (85), Expect = 0.17
Identities = 14/38 (36%), Positives = 27/38 (71%)
Frame = +3
Query: 114 HHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATI 227
HH+FT G+ + +F++A+ + +PTGI++F +AT+
Sbjct: 331 HHMFTTGLPALSLGFFSAASEAVVIPTGIQLFAFVATL 368
>UniRef50_A7H8L4 Cluster: Cytochrome c oxidase subunit I type; n=38;
Bacteria|Rep: Cytochrome c oxidase subunit I type -
Anaeromyxobacter sp. Fw109-5
Length = 555
Score = 57.2 bits (132), Expect = 4e-07
Identities = 20/39 (51%), Positives = 30/39 (76%)
Frame = +2
Query: 272 GFVFLFTVGGLTGVILANSSIDITLHDTYYVVAHFHYVL 388
GF+F GG+TG+ LA S+D+ HDTY++VAHFH+++
Sbjct: 361 GFLFFLVFGGMTGIALATVSLDVHWHDTYFIVAHFHFIM 399
Score = 37.9 bits (84), Expect = 0.23
Identities = 16/32 (50%), Positives = 19/32 (59%)
Frame = +1
Query: 508 NITFFPQHFLGLAGIPRRYSDYPDSYMSWKYN 603
N TF PQ LG G+PRRY YP+ + W N
Sbjct: 440 NFTFIPQFLLGNEGMPRRYFSYPEKF--WALN 469
>UniRef50_Q5P1W4 Cluster: Cytochrome c oxidase, subunit I; n=13;
Bacteria|Rep: Cytochrome c oxidase, subunit I - Azoarcus
sp. (strain EbN1) (Aromatoleum aromaticum (strain EbN1))
Length = 607
Score = 56.8 bits (131), Expect = 5e-07
Identities = 23/40 (57%), Positives = 31/40 (77%)
Frame = +2
Query: 269 LGFVFLFTVGGLTGVILANSSIDITLHDTYYVVAHFHYVL 388
LGF+F+F +GGLTGV++A D HD+Y++VAH HYVL
Sbjct: 430 LGFLFIFVLGGLTGVMVAVIPFDWQAHDSYFIVAHLHYVL 469
Score = 46.4 bits (105), Expect = 7e-04
Identities = 22/45 (48%), Positives = 26/45 (57%)
Frame = +1
Query: 508 NITFFPQHFLGLAGIPRRYSDYPDSYMSWKYNFLH*VHIFLYVSG 642
NITFFP HF GLAG+PRR Y Y NF+ V F+ +G
Sbjct: 510 NITFFPMHFTGLAGMPRRVYTYAAGYGWESLNFVSTVGAFMIAAG 554
Score = 37.5 bits (83), Expect = 0.30
Identities = 14/37 (37%), Positives = 27/37 (72%)
Frame = +3
Query: 114 HHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LAT 224
HH+FT GI + ++F +A+ +A+P+G+++F +AT
Sbjct: 374 HHMFTTGIPQLSLSFFQAASTAVAIPSGMQVFAWIAT 410
>UniRef50_Q9TCU2 Cluster: Cytochrome c oxidase subunit I; n=1;
Taenia saginata|Rep: Cytochrome c oxidase subunit I -
Taenia saginata (Beef tapeworm)
Length = 147
Score = 56.8 bits (131), Expect = 5e-07
Identities = 24/51 (47%), Positives = 38/51 (74%), Gaps = 1/51 (1%)
Frame = +3
Query: 114 HHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQIN-YNPIFY 263
HH+FTVG+D++T +F+S T+II VPTGIK+F L + +++N +PI +
Sbjct: 53 HHMFTVGLDVNTAVFFSSVTMIIRVPTGIKVFTWLYMLSNSRVNKXDPILW 103
>UniRef50_Q34463 Cluster: Cytochrome oxidase subunit I; n=3; Euglena
gracilis|Rep: Cytochrome oxidase subunit I - Euglena
gracilis
Length = 495
Score = 56.4 bits (130), Expect = 6e-07
Identities = 23/39 (58%), Positives = 30/39 (76%)
Frame = +2
Query: 275 FVFLFTVGGLTGVILANSSIDITLHDTYYVVAHFHYVLS 391
F+ F GG TG++L++ S+DI LHDTY+VV HFH VLS
Sbjct: 354 FLICFCFGGFTGLLLSSGSLDIMLHDTYFVVGHFHTVLS 392
Score = 55.6 bits (128), Expect = 1e-06
Identities = 22/37 (59%), Positives = 32/37 (86%)
Frame = +3
Query: 99 FIV*AHHIFTVGIDIDTRAYFTSATIIIAVPTGIKIF 209
+ V AHH+FTVG+DID+R+YF+ AT II++PT +K+F
Sbjct: 294 YFVWAHHMFTVGLDIDSRSYFSIATSIISIPTSVKMF 330
>UniRef50_Q1CZF1 Cluster: Cytochrome c oxidase, subunit I; n=1;
Myxococcus xanthus DK 1622|Rep: Cytochrome c oxidase,
subunit I - Myxococcus xanthus (strain DK 1622)
Length = 556
Score = 56.0 bits (129), Expect = 8e-07
Identities = 20/39 (51%), Positives = 29/39 (74%)
Frame = +2
Query: 272 GFVFLFTVGGLTGVILANSSIDITLHDTYYVVAHFHYVL 388
GF+F GG+TG+ L S+D+ HDTY+VVAHFH+++
Sbjct: 368 GFLFFTVFGGMTGIALGTVSLDVAWHDTYFVVAHFHFIM 406
Score = 37.1 bits (82), Expect = 0.40
Identities = 14/28 (50%), Positives = 19/28 (67%)
Frame = +1
Query: 508 NITFFPQHFLGLAGIPRRYSDYPDSYMS 591
N TF PQ LG G+PRRY +YP+ + +
Sbjct: 447 NATFIPQFLLGNNGMPRRYYEYPERFQA 474
>UniRef50_Q0AI64 Cluster: Cytochrome-c oxidase; n=3;
Proteobacteria|Rep: Cytochrome-c oxidase - Nitrosomonas
eutropha (strain C71)
Length = 703
Score = 54.8 bits (126), Expect = 2e-06
Identities = 20/37 (54%), Positives = 30/37 (81%)
Frame = +2
Query: 269 LGFVFLFTVGGLTGVILANSSIDITLHDTYYVVAHFH 379
L F+FLF +GG+TG++LAN +D +H+T ++VAHFH
Sbjct: 405 LAFIFLFVIGGITGIMLANPILDYQVHNTVFLVAHFH 441
Score = 40.3 bits (90), Expect = 0.043
Identities = 20/56 (35%), Positives = 34/56 (60%), Gaps = 1/56 (1%)
Frame = +3
Query: 99 FIV*AHHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYN-PIFY 263
F+V HH FT+G A F A+++I +PTG+KI+ + T+ +I ++ P+ Y
Sbjct: 348 FLVWLHHFFTMGQSGHINAVFGIASMLIGIPTGVKIYDWMWTMLRGRIRFSVPMIY 403
>UniRef50_A2T428 Cluster: Putative uncharacterized protein ORF820;
n=1; Placozoan sp. BZ49|Rep: Putative uncharacterized
protein ORF820 - Placozoan sp. BZ49
Length = 820
Score = 54.8 bits (126), Expect = 2e-06
Identities = 23/30 (76%), Positives = 29/30 (96%)
Frame = +3
Query: 120 IFTVGIDIDTRAYFTSATIIIAVPTGIKIF 209
++ VG+D+DTRAYFT+AT+IIAVPTGIKIF
Sbjct: 1 MYVVGMDVDTRAYFTAATMIIAVPTGIKIF 30
>UniRef50_A0RZ19 Cluster: Heme/copper-type cytochrome/quinol
oxidase, subunit 1; n=2; Thermoprotei|Rep:
Heme/copper-type cytochrome/quinol oxidase, subunit 1 -
Cenarchaeum symbiosum
Length = 508
Score = 54.4 bits (125), Expect = 2e-06
Identities = 29/85 (34%), Positives = 39/85 (45%)
Frame = +2
Query: 269 LGFVFLFTVGGLTGVILANSSIDITLHDTYYVVAHFHYVLSXXXXXXXXXXXXN*YPLFT 448
+G + LF G GV+ A +D T HDTY+VV HFH + +P T
Sbjct: 343 IGGIALFFSAGAGGVLNAAMPLDFTTHDTYWVVGHFHLFVMGTIAFGSIGFFYYMFPFVT 402
Query: 449 GLSLNSYILKIQFFTIFIGVI*HFF 523
G N + KI F F+G + FF
Sbjct: 403 GRMYNEKLGKIHFVFSFVGAVLLFF 427
Score = 34.7 bits (76), Expect = 2.1
Identities = 13/22 (59%), Positives = 16/22 (72%)
Frame = +1
Query: 511 ITFFPQHFLGLAGIPRRYSDYP 576
+ FF QH LG+ G+PRR DYP
Sbjct: 424 LLFFTQHILGIYGMPRRVYDYP 445
>UniRef50_P11947 Cluster: Cytochrome c oxidase subunit 1; n=48;
Oligohymenophorea|Rep: Cytochrome c oxidase subunit 1 -
Tetrahymena pyriformis
Length = 698
Score = 54.4 bits (125), Expect = 2e-06
Identities = 21/41 (51%), Positives = 33/41 (80%)
Frame = +2
Query: 269 LGFVFLFTVGGLTGVILANSSIDITLHDTYYVVAHFHYVLS 391
+ F+ LF V G TG+ L++ S+++++HDT+YVVAHFH +LS
Sbjct: 502 MSFLLLFLVAGFTGMWLSHVSLNVSMHDTFYVVAHFHIMLS 542
Score = 40.7 bits (91), Expect = 0.033
Identities = 17/36 (47%), Positives = 23/36 (63%), Gaps = 3/36 (8%)
Frame = +1
Query: 496 IYWSN---ITFFPQHFLGLAGIPRRYSDYPDSYMSW 594
IY+S + F PQ +LG +G+PRR DYP +M W
Sbjct: 575 IYYSGGQWVAFVPQFYLGFSGMPRRIHDYPVVFMGW 610
Score = 35.9 bits (79), Expect = 0.93
Identities = 13/36 (36%), Positives = 26/36 (72%)
Frame = +3
Query: 99 FIV*AHHIFTVGIDIDTRAYFTSATIIIAVPTGIKI 206
++V HH++ VG+D +R +++ TI+I++P IK+
Sbjct: 445 YLVWGHHMYLVGLDHRSRTMYSTITIMISMPATIKV 480
>UniRef50_A3SJL2 Cluster: QoxA, Quinol oxidase subunit I; n=2;
Rhodobacteraceae|Rep: QoxA, Quinol oxidase subunit I -
Roseovarius nubinhibens ISM
Length = 818
Score = 54.0 bits (124), Expect = 3e-06
Identities = 29/79 (36%), Positives = 38/79 (48%)
Frame = +2
Query: 269 LGFVFLFTVGGLTGVILANSSIDITLHDTYYVVAHFHYVLSXXXXXXXXXXXXN*YPLFT 448
L F F +GGLTGV++A D +HDTY++VAH HYVL P FT
Sbjct: 357 LAFFATFVIGGLTGVMVAIVPFDWQVHDTYFIVAHLHYVLIGGFVFPMLAALYYWLPHFT 416
Query: 449 GLSLNSYILKIQFFTIFIG 505
G + F+ + IG
Sbjct: 417 GRKTYFNLGPTAFWLVVIG 435
Score = 37.9 bits (84), Expect = 0.23
Identities = 15/38 (39%), Positives = 27/38 (71%)
Frame = +3
Query: 114 HHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATI 227
HH+FT GI A+F++A+ ++AVPT +++F + T+
Sbjct: 305 HHMFTTGIPHLGLAFFSAASTLVAVPTAVQLFIWIGTL 342
>UniRef50_Q8ZXD1 Cluster: Cytochrome C oxidase subunit I /III; n=4;
cellular organisms|Rep: Cytochrome C oxidase subunit I
/III - Pyrobaculum aerophilum
Length = 800
Score = 53.6 bits (123), Expect = 4e-06
Identities = 26/79 (32%), Positives = 42/79 (53%)
Frame = +2
Query: 269 LGFVFLFTVGGLTGVILANSSIDITLHDTYYVVAHFHYVLSXXXXXXXXXXXXN*YPLFT 448
L F+ F VGG+TGV ++D+ LHDTY+V+ HFHY+++ +P T
Sbjct: 351 LTFLLFFIVGGVTGVFFPVITLDLHLHDTYFVLGHFHYIVNAIAFGVFGALLYY-FPHLT 409
Query: 449 GLSLNSYILKIQFFTIFIG 505
G + + +I + I +G
Sbjct: 410 GRWYDERLARISWALITVG 428
Score = 44.0 bits (99), Expect = 0.003
Identities = 19/48 (39%), Positives = 30/48 (62%)
Frame = +3
Query: 99 FIV*AHHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQI 242
F V HH+FT D R AT+ +A+P+G+K+F +AT++G +I
Sbjct: 294 FAVWMHHMFTAVQDFAPRVAMAIATMAVAIPSGVKVFNWVATLYGGRI 341
>UniRef50_Q7NQZ0 Cluster: Cytochrome o ubiquinol oxidase, subunit I;
n=22; Bacteria|Rep: Cytochrome o ubiquinol oxidase,
subunit I - Chromobacterium violaceum
Length = 680
Score = 53.2 bits (122), Expect = 6e-06
Identities = 28/83 (33%), Positives = 42/83 (50%)
Frame = +2
Query: 257 IL*RLGFVFLFTVGGLTGVILANSSIDITLHDTYYVVAHFHYVLSXXXXXXXXXXXXN*Y 436
IL LGF+ F++GG+TGV+LA D LH++ +++AHFH + +
Sbjct: 382 ILWTLGFMVTFSIGGMTGVLLAVPGADYVLHNSLFLIAHFHNTIIGGAVFGYLAGVSFWF 441
Query: 437 PLFTGLSLNSYILKIQFFTIFIG 505
P G LN + K F+ IG
Sbjct: 442 PKVFGFKLNDKLGKASFWFWQIG 464
Score = 50.4 bits (115), Expect = 4e-05
Identities = 23/56 (41%), Positives = 37/56 (66%), Gaps = 1/56 (1%)
Frame = +3
Query: 99 FIV*AHHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINY-NPIFY 263
F+V HH FT+G + A+F AT+II++PTG+K+F L TI+ ++ + PI +
Sbjct: 329 FMVWLHHFFTMGSGANVNAFFGIATMIISIPTGVKLFNWLFTIYKGRLRFETPILW 384
>UniRef50_Q9WWR2 Cluster: Ubiquinol oxidase subunit 1 (EC 1.10.3.-)
(Ubiquinol oxidase polypeptide I) (Cytochrome o subunit
1) (Oxidase BO(3) subunit 1); n=240; Bacteria|Rep:
Ubiquinol oxidase subunit 1 (EC 1.10.3.-) (Ubiquinol
oxidase polypeptide I) (Cytochrome o subunit 1) (Oxidase
BO(3) subunit 1) - Pseudomonas putida
Length = 672
Score = 53.2 bits (122), Expect = 6e-06
Identities = 27/78 (34%), Positives = 41/78 (52%)
Frame = +2
Query: 257 IL*RLGFVFLFTVGGLTGVILANSSIDITLHDTYYVVAHFHYVLSXXXXXXXXXXXXN*Y 436
I+ LGF+ F++GG+TGV+LA D LH++ +V+AHFH V+ +
Sbjct: 381 IMWTLGFMITFSIGGMTGVLLAVPGADFVLHNSLFVIAHFHNVIIGGAVFGYIAGFAYWF 440
Query: 437 PLFTGLSLNSYILKIQFF 490
P G +LN K F+
Sbjct: 441 PKAFGFTLNEKWGKAAFW 458
Score = 47.2 bits (107), Expect = 4e-04
Identities = 21/56 (37%), Positives = 34/56 (60%), Gaps = 1/56 (1%)
Frame = +3
Query: 99 FIV*AHHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYN-PIFY 263
F V HH FT+G +F AT++I++PTG+K+F L TI+ ++ + PI +
Sbjct: 328 FAVWLHHFFTMGAGASVNTFFGLATMLISIPTGVKLFNWLFTIYQGRLRFTAPIMW 383
>UniRef50_Q9YDX6 Cluster: Heme-copper oxidase subunit I+III; n=1;
Aeropyrum pernix|Rep: Heme-copper oxidase subunit I+III
- Aeropyrum pernix
Length = 815
Score = 52.8 bits (121), Expect = 8e-06
Identities = 28/80 (35%), Positives = 40/80 (50%)
Frame = +2
Query: 269 LGFVFLFTVGGLTGVILANSSIDITLHDTYYVVAHFHYVLSXXXXXXXXXXXXN*YPLFT 448
+G + F +GG TGV L + +ID TY+VVAHFHY+L +P T
Sbjct: 349 VGALLNFIIGGSTGVYLGSIAIDRGFRGTYWVVAHFHYILVGTVTLGLIAGLYYWWPKIT 408
Query: 449 GLSLNSYILKIQFFTIFIGV 508
G + + + KI F +GV
Sbjct: 409 GRTYSERLGKIHFALAMLGV 428
Score = 37.5 bits (83), Expect = 0.30
Identities = 15/50 (30%), Positives = 31/50 (62%)
Frame = +3
Query: 99 FIV*AHHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINY 248
F+V HH+F G +I TR +++ TI+I++P + + + T++ ++ Y
Sbjct: 292 FVVWMHHMFITGTNIYTRLFYSITTILISIPFEMAVMSFIFTLYKGRLVY 341
>UniRef50_Q9TCV5 Cluster: Cytochrome c oxidase subunit I; n=6;
Digenea|Rep: Cytochrome c oxidase subunit I -
Echinostoma hortense
Length = 154
Score = 52.0 bits (119), Expect = 1e-05
Identities = 21/44 (47%), Positives = 31/44 (70%)
Frame = +3
Query: 102 IV*AHHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHG 233
+V AHH+F VG D+ T +F+S T++I +PTGIK+F L + G
Sbjct: 50 VVWAHHMFMVGYDVHTAVFFSSVTMVIGIPTGIKVFSWLIMLGG 93
>UniRef50_A5FXH8 Cluster: Cytochrome-c oxidase; n=1; Acidiphilium
cryptum JF-5|Rep: Cytochrome-c oxidase - Acidiphilium
cryptum (strain JF-5)
Length = 689
Score = 51.6 bits (118), Expect = 2e-05
Identities = 28/87 (32%), Positives = 48/87 (55%)
Frame = +2
Query: 251 PYIL*RLGFVFLFTVGGLTGVILANSSIDITLHDTYYVVAHFHYVLSXXXXXXXXXXXXN 430
P +L LG +FL VGGLTG++LA +I+ T+H++ +VVAHFH ++
Sbjct: 398 PPMLWALGALFLLLVGGLTGMMLAIPAINYTVHNSVFVVAHFHCMMLLIAYAIFGAIIF- 456
Query: 431 *YPLFTGLSLNSYILKIQFFTIFIGVI 511
+P G L++ + F++ +G +
Sbjct: 457 WFPKLFGFHLDAPSARANFWSFSVGTV 483
Score = 43.6 bits (98), Expect = 0.005
Identities = 15/47 (31%), Positives = 29/47 (61%)
Frame = +3
Query: 114 HHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNP 254
HH FT+G +F++AT+++ +PTG+K+F T+ ++ + P
Sbjct: 352 HHFFTMGAGPGINIFFSTATMLVGIPTGVKVFNWALTLWRGRLRFEP 398
>UniRef50_Q9RR77 Cluster: Cytochrome c oxidase, subunit I; n=2;
Deinococcus|Rep: Cytochrome c oxidase, subunit I -
Deinococcus radiodurans
Length = 820
Score = 51.2 bits (117), Expect = 2e-05
Identities = 27/79 (34%), Positives = 38/79 (48%)
Frame = +2
Query: 269 LGFVFLFTVGGLTGVILANSSIDITLHDTYYVVAHFHYVLSXXXXXXXXXXXXN*YPLFT 448
+GF+F F +GG+TGV L D + +YYVVAHFH V+ +P T
Sbjct: 359 IGFIFNFLIGGITGVSLGMIPFDYQVTMSYYVVAHFHNVMMFGTAFLAMAGLYYWWPKMT 418
Query: 449 GLSLNSYILKIQFFTIFIG 505
G L+ + F+ IG
Sbjct: 419 GRFLDEKVGLAHFWLFMIG 437
Score = 46.0 bits (104), Expect = 9e-04
Identities = 22/47 (46%), Positives = 31/47 (65%)
Frame = +3
Query: 102 IV*AHHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQI 242
IV HH+F VGI + F +T+I+AVPTG+KIF + T+ G +I
Sbjct: 303 IVWLHHMFAVGIPEAWQIAFMISTLIVAVPTGVKIFNLIGTLWGGRI 349
Score = 45.2 bits (102), Expect = 0.002
Identities = 23/57 (40%), Positives = 32/57 (56%), Gaps = 1/57 (1%)
Frame = +1
Query: 511 ITFFPQHFLGLAGIPRRYSDYPDSYMSW-KYNFLH*VHIFLYVSGN**SINLIFEEF 678
+TF PQ+ LGL G+PRRY YP +W + NF V FL + G + +F+ F
Sbjct: 440 LTFLPQYILGLLGMPRRYYTYPAGNWAWTELNFASTVGAFLLLLGGLAMLYNMFQSF 496
>UniRef50_Q8LX82 Cluster: Cytochrome c oxidase subunit I; n=3;
Chaoborus|Rep: Cytochrome c oxidase subunit I -
Chaoborus obscuripes
Length = 206
Score = 50.8 bits (116), Expect = 3e-05
Identities = 24/28 (85%), Positives = 26/28 (92%)
Frame = +3
Query: 141 IDTRAYFTSATIIIAVPTGIKIFR*LAT 224
+DTRAYFTSAT+IIAVPTGIKIF LAT
Sbjct: 2 VDTRAYFTSATMIIAVPTGIKIFSWLAT 29
Score = 44.8 bits (101), Expect = 0.002
Identities = 34/133 (25%), Positives = 48/133 (36%)
Frame = +1
Query: 241 LIITLYFMKIRFCIFIHSRRINRCNFSQFFXXXXXXXXXXXXXXXXXXXXXXXXXCNYWG 420
L ++ +M I CIFIH + F CNY G
Sbjct: 36 LFFSITYMGISICIFIHLLEDLQELFLLILLLMLFYMTLIMLCSFSLCFIYSSCFCNYIG 95
Query: 421 IY*LISFIYRPFIKFLYTKNSIFYNIYWSNITFFPQHFLGLAGIPRRYSDYPDSYMSWKY 600
IY L+ I K L KNSIFYNI+ F F ++ + KY
Sbjct: 96 IYSLMPLINSTNNKSLMIKNSIFYNIFSGKSYIFSTTFFSISSDTPTMLSFSSLIQLLKY 155
Query: 601 NFLH*VHIFLYVS 639
+ ++I LY++
Sbjct: 156 HLKISIYIILYLN 168
>UniRef50_Q9Z605 Cluster: Quinol oxidase subunit I; n=15;
Proteobacteria|Rep: Quinol oxidase subunit I -
Rhodobacter sphaeroides (Rhodopseudomonas sphaeroides)
Length = 825
Score = 50.4 bits (115), Expect = 4e-05
Identities = 21/40 (52%), Positives = 28/40 (70%)
Frame = +2
Query: 269 LGFVFLFTVGGLTGVILANSSIDITLHDTYYVVAHFHYVL 388
L F F +GGLTGV++A D +HDT+++VAH HYVL
Sbjct: 357 LAFFATFVIGGLTGVMVAVVPFDWQVHDTHFIVAHLHYVL 396
Score = 37.5 bits (83), Expect = 0.30
Identities = 15/38 (39%), Positives = 26/38 (68%)
Frame = +3
Query: 114 HHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATI 227
HH+FT GI A F++A+ ++AVPT +++F + T+
Sbjct: 305 HHMFTTGIPHMGLALFSAASTLVAVPTAVQLFAWIGTL 342
>UniRef50_Q6RCN4 Cluster: Cytochrome c oxidase subunit I; n=1;
Bucephalid sp. KH-2004|Rep: Cytochrome c oxidase subunit
I - Bucephalid sp. KH-2004
Length = 121
Score = 50.0 bits (114), Expect = 5e-05
Identities = 20/36 (55%), Positives = 27/36 (75%)
Frame = +3
Query: 102 IV*AHHIFTVGIDIDTRAYFTSATIIIAVPTGIKIF 209
+V HH+F VG D+ T +F+S T+II VPTGIK+F
Sbjct: 26 VVWLHHMFMVGFDVKTAVFFSSVTMIIGVPTGIKVF 61
>UniRef50_Q6KZG3 Cluster: Cytochrome c oxidase polypeptide I/III;
n=2; Thermoplasmatales|Rep: Cytochrome c oxidase
polypeptide I/III - Picrophilus torridus
Length = 841
Score = 48.8 bits (111), Expect = 1e-04
Identities = 24/74 (32%), Positives = 38/74 (51%)
Frame = +2
Query: 287 FTVGGLTGVILANSSIDITLHDTYYVVAHFHYVLSXXXXXXXXXXXXN*YPLFTGLSLNS 466
F +GG++GV ++ +ID +H YYVVAHFHY + +P FTG +
Sbjct: 376 FMIGGVSGVTQSSLAIDTIVHGDYYVVAHFHYFMVGVAVMGLMGNLYYYFPKFTGRMYSE 435
Query: 467 YILKIQFFTIFIGV 508
+ +I + + GV
Sbjct: 436 KLGRIHWAFAYPGV 449
>UniRef50_P39481 Cluster: Quinol oxidase subunit 1/3; n=5;
Sulfolobaceae|Rep: Quinol oxidase subunit 1/3 -
Sulfolobus acidocaldarius
Length = 788
Score = 47.2 bits (107), Expect = 4e-04
Identities = 18/40 (45%), Positives = 27/40 (67%)
Frame = +2
Query: 269 LGFVFLFTVGGLTGVILANSSIDITLHDTYYVVAHFHYVL 388
+ F+ +F +GG+TGV ID L+ TY+VV HFHY++
Sbjct: 340 ISFIVMFLLGGITGVFFPLVPIDYALNGTYFVVGHFHYMV 379
Score = 37.1 bits (82), Expect = 0.40
Identities = 15/45 (33%), Positives = 28/45 (62%)
Frame = +3
Query: 114 HHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINY 248
HH+FT + + ++ T+ IA+P+G+K+ AT++G +I Y
Sbjct: 288 HHMFTAIDNTLVQIVSSATTMAIAIPSGVKVLNWTATLYGGEIRY 332
>UniRef50_Q05FH1 Cluster: Cytochrome O ubiquinol oxidase subunit I;
n=1; Candidatus Carsonella ruddii PV|Rep: Cytochrome O
ubiquinol oxidase subunit I - Carsonella ruddii (strain
PV)
Length = 606
Score = 46.8 bits (106), Expect = 5e-04
Identities = 21/55 (38%), Positives = 35/55 (63%)
Frame = +3
Query: 99 FIV*AHHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPIFY 263
F+V HH FT+G + +F+ +T+IIA+PTG+KIF + TI + + +F+
Sbjct: 323 FLVWLHHFFTMGSGYLSNIFFSISTMIIAIPTGVKIFNWIFTILFSNFKKDILFF 377
Score = 46.8 bits (106), Expect = 5e-04
Identities = 28/88 (31%), Positives = 46/88 (52%), Gaps = 3/88 (3%)
Frame = +2
Query: 269 LGFVFLFTVGGLTGVILANSSIDITLHDTYYVVAHFHYVLSXXXXXXXXXXXXN*YPL-F 445
+ F+ +F++GG +GVIL+ ++D H++ +++AHFH V+ Y L +
Sbjct: 380 ISFIIIFSIGGFSGVILSIPNLDFIFHNSMFLIAHFHSVIIGGVLFGYLSGISLWYNLIY 439
Query: 446 TGLSLNSYILKIQFFTIF--IGVI*HFF 523
LN+ K F +F IGVI FF
Sbjct: 440 NNCELNN---KFNFNILFWLIGVILTFF 464
>UniRef50_O86945 Cluster: Sub-unit I of an aa3-type cytochrome
oxidase; n=1; Acidithiobacillus ferrooxidans|Rep:
Sub-unit I of an aa3-type cytochrome oxidase -
Thiobacillus ferrooxidans (Acidithiobacillus
ferrooxidans)
Length = 627
Score = 46.4 bits (105), Expect = 7e-04
Identities = 23/72 (31%), Positives = 35/72 (48%)
Frame = +2
Query: 287 FTVGGLTGVILANSSIDITLHDTYYVVAHFHYVLSXXXXXXXXXXXXN*YPLFTGLSLNS 466
F +GGLTG+ A+ D+ LH+TY+V+AHFH +P TG +N
Sbjct: 439 FLIGGLTGIFNADVPADLQLHNTYWVIAHFHIRCFGGVIFTWIAALYWWFPKVTGRKINE 498
Query: 467 YILKIQFFTIFI 502
+ K + F+
Sbjct: 499 FWGKFHAWWSFV 510
>UniRef50_Q9TAP7 Cluster: Cytochrome oxidase subunit 1; n=1;
Clonorchis sinensis|Rep: Cytochrome oxidase subunit 1 -
Clonorchis sinensis
Length = 120
Score = 42.7 bits (96), Expect = 0.008
Identities = 23/44 (52%), Positives = 29/44 (65%)
Frame = -3
Query: 235 VPCIVASHLKILIPVGTAIIIVAEVKYARVSISIPTVNI**AQT 104
VP + +H K LIPVGT +I+V E+K V S PTVN+ AQT
Sbjct: 51 VPASMYNHEKTLIPVGTPMIMVTELKKTAVPKSSPTVNMWWAQT 94
>UniRef50_O67937 Cluster: Cytochrome c oxidase subunit I; n=1;
Aquifex aeolicus|Rep: Cytochrome c oxidase subunit I -
Aquifex aeolicus
Length = 592
Score = 41.5 bits (93), Expect = 0.019
Identities = 14/32 (43%), Positives = 25/32 (78%)
Frame = +2
Query: 284 LFTVGGLTGVILANSSIDITLHDTYYVVAHFH 379
LF +GG+TG++ A+ ++++ +H+T YV HFH
Sbjct: 354 LFFIGGITGIVNASYNVNLVVHNTAYVPGHFH 385
>UniRef50_Q396U4 Cluster: Cytochrome c oxidase, subunit I; n=18;
Proteobacteria|Rep: Cytochrome c oxidase, subunit I -
Burkholderia sp. (strain 383) (Burkholderia cepacia
(strain ATCC 17760/ NCIB 9086 / R18194))
Length = 541
Score = 41.1 bits (92), Expect = 0.025
Identities = 23/83 (27%), Positives = 41/83 (49%), Gaps = 2/83 (2%)
Frame = +2
Query: 269 LGFVFLFT-VGGLTGVILANSSIDITLHDTYYVVAHFHYVLSXXXXXXXXXXXXN*YPLF 445
L F F+ GG G+I + +D T+H+T ++ HFH + + + +P
Sbjct: 331 LAFSFVMLGFGGAGGLINMSYQLDTTIHNTQWITGHFHLIFAGAIVTMYFAIAYDLWPHL 390
Query: 446 TGLSLNSY-ILKIQFFTIFIGVI 511
TG +L +++ Q + FIG+I
Sbjct: 391 TGRALTHVRLMRWQLWLWFIGMI 413
>UniRef50_Q8LX68 Cluster: Cytochrome oxidase I; n=2; Chaoborus|Rep:
Cytochrome oxidase I - Chaoborus pallidus
Length = 206
Score = 41.1 bits (92), Expect = 0.025
Identities = 27/91 (29%), Positives = 33/91 (36%)
Frame = +1
Query: 262 MKIRFCIFIHSRRINRCNFSQFFXXXXXXXXXXXXXXXXXXXXXXXXXCNYWGIY*LISF 441
+ FC FI+ N +FSQF CNY IY L+
Sbjct: 43 LSFSFCFFIYRWSFNSGSFSQFLNWYYSTWYLLCCSSFPLRSFNSSSICNYISIYPLMPP 102
Query: 442 IYRPFIKFLYTKNSIFYNIYWSNITFFPQHF 534
+ F K KNSI+ NIY S F F
Sbjct: 103 LNWTFYKSKMIKNSIYNNIYSSKSNIFSPTF 133
>UniRef50_Q6RJT8 Cluster: Cytochrome c oxidase subunit 2; n=1;
Harmonia axyridis|Rep: Cytochrome c oxidase subunit 2 -
Harmonia axyridis (Multicolored Asian lady beetle)
Length = 193
Score = 39.9 bits (89), Expect = 0.057
Identities = 16/33 (48%), Positives = 18/33 (54%)
Frame = +2
Query: 14 YYFTRKRKKRNFWLFRNNLCYTSNWVIRIYCLS 112
YY+T K K W F NNLCY S W I +S
Sbjct: 26 YYYTSKSGKNCLWFFSNNLCYISYWTSSICSMS 58
>UniRef50_Q9YBH5 Cluster: Cytochrome c oxidase (Ba3-type) subunit I;
n=1; Aeropyrum pernix|Rep: Cytochrome c oxidase
(Ba3-type) subunit I - Aeropyrum pernix
Length = 548
Score = 39.5 bits (88), Expect = 0.075
Identities = 14/34 (41%), Positives = 24/34 (70%)
Frame = +2
Query: 278 VFLFTVGGLTGVILANSSIDITLHDTYYVVAHFH 379
+ LF GG+TG+I A+ ++ +H+T ++V HFH
Sbjct: 340 IILFANGGITGIINASFQLNTVVHNTTWIVGHFH 373
>UniRef50_Q5VI63 Cluster: SoxB; n=3; Sulfolobaceae|Rep: SoxB -
Acidianus brierleyi
Length = 148
Score = 39.1 bits (87), Expect = 0.099
Identities = 19/45 (42%), Positives = 28/45 (62%), Gaps = 5/45 (11%)
Frame = +2
Query: 269 LGFVFL-----FTVGGLTGVILANSSIDITLHDTYYVVAHFHYVL 388
LG FL F +GG+ + L + I+ +H+TYYVV HFHY++
Sbjct: 103 LGMTFLIALIGFIIGGVQALPLPINIINGVVHNTYYVVGHFHYMV 147
>UniRef50_Q8HN76 Cluster: Cytochrome c oxidase subunit I; n=21;
Aphidomorpha|Rep: Cytochrome c oxidase subunit I -
Phylloxera sp. DAD-2001a
Length = 83
Score = 38.7 bits (86), Expect = 0.13
Identities = 13/19 (68%), Positives = 18/19 (94%)
Frame = +1
Query: 538 GLAGIPRRYSDYPDSYMSW 594
GL G+PRRYSDYP++Y++W
Sbjct: 1 GLNGMPRRYSDYPNNYLTW 19
>UniRef50_Q604Y9 Cluster: Cytochrome c oxidase, subunit I; n=1;
Methylococcus capsulatus|Rep: Cytochrome c oxidase,
subunit I - Methylococcus capsulatus
Length = 537
Score = 37.5 bits (83), Expect = 0.30
Identities = 21/88 (23%), Positives = 42/88 (47%), Gaps = 1/88 (1%)
Frame = +2
Query: 251 PYIL*RLGFVFLFTVGGLTGVILANSSIDITLHDTYYVVAHFHYVLSXXXXXXXXXXXXN 430
P +L + + + +GG G++ A+ +++ +H+T +V HFH + +
Sbjct: 328 PMVLAAILSLLMLVLGGFGGIVNASYAMNAMVHNTAWVPGHFHLIFAGTVITMYLAVAYK 387
Query: 431 *YPLFTGLSLNSYILK-IQFFTIFIGVI 511
+P G L S L +Q + FIG++
Sbjct: 388 LWPELCGRRLYSVDLALVQLWGWFIGMV 415
>UniRef50_Q8ZXC1 Cluster: Cytochrome C oxidase subunit I; n=3;
Pyrobaculum|Rep: Cytochrome C oxidase subunit I -
Pyrobaculum aerophilum
Length = 557
Score = 37.5 bits (83), Expect = 0.30
Identities = 13/34 (38%), Positives = 24/34 (70%)
Frame = +2
Query: 278 VFLFTVGGLTGVILANSSIDITLHDTYYVVAHFH 379
+ LF + G +GV+ A+ +++ +H+T +VV HFH
Sbjct: 340 IILFGIAGFSGVVNASFNVNYNVHNTAWVVGHFH 373
>UniRef50_A5URU0 Cluster: Cytochrome c oxidase, subunit I; n=4;
Chloroflexaceae|Rep: Cytochrome c oxidase, subunit I -
Roseiflexus sp. RS-1
Length = 561
Score = 37.1 bits (82), Expect = 0.40
Identities = 22/78 (28%), Positives = 38/78 (48%), Gaps = 1/78 (1%)
Frame = +2
Query: 278 VFLFTVGGLTGVILANSSIDITLHDTYYVVAHFHYVLSXXXXXXXXXXXXN*YPLFTGLS 457
+ LF GG G+I A+ +I++ +H+T ++ HFH + P TG
Sbjct: 359 MILFAFGGAGGLINASYNINLVVHNTSWISGHFHLTVGTAVTLSFMGITYWLVPHLTGRR 418
Query: 458 LNSYILK-IQFFTIFIGV 508
L S + +Q +T F+G+
Sbjct: 419 LWSPTMALVQAWTWFVGM 436
>UniRef50_Q2W549 Cluster: Heme/copper-type cytochrome/quinol
oxidase, subunit 1; n=3; Magnetospirillum|Rep:
Heme/copper-type cytochrome/quinol oxidase, subunit 1 -
Magnetospirillum magneticum (strain AMB-1 / ATCC 700264)
Length = 560
Score = 36.3 bits (80), Expect = 0.70
Identities = 14/37 (37%), Positives = 22/37 (59%)
Frame = +2
Query: 269 LGFVFLFTVGGLTGVILANSSIDITLHDTYYVVAHFH 379
L + +GG++GV + I+I +H+T YV HFH
Sbjct: 351 LSLILFGFLGGISGVTMGVEQINIMIHNTIYVPGHFH 387
>UniRef50_Q28SZ6 Cluster: Cytochrome c oxidase subunit I; n=1;
Jannaschia sp. CCS1|Rep: Cytochrome c oxidase subunit I
- Jannaschia sp. (strain CCS1)
Length = 155
Score = 36.3 bits (80), Expect = 0.70
Identities = 14/25 (56%), Positives = 17/25 (68%)
Frame = +2
Query: 311 VILANSSIDITLHDTYYVVAHFHYV 385
+ L+ D T HDTYYVVAH HY+
Sbjct: 29 IALSQPGADGTYHDTYYVVAHIHYL 53
>UniRef50_Q3INR3 Cluster: Cytochrome-c-like terminal oxidase,
subunit I 3; n=1; Natronomonas pharaonis DSM 2160|Rep:
Cytochrome-c-like terminal oxidase, subunit I 3 -
Natronomonas pharaonis (strain DSM 2160 / ATCC 35678)
Length = 575
Score = 36.3 bits (80), Expect = 0.70
Identities = 12/29 (41%), Positives = 21/29 (72%)
Frame = +2
Query: 293 VGGLTGVILANSSIDITLHDTYYVVAHFH 379
+GG+TGV++ +++T H+T+ V HFH
Sbjct: 371 MGGITGVLMGQLQLNMTWHNTFATVGHFH 399
>UniRef50_P98004 Cluster: Quinol oxidase subunit 1 (EC 1.10.3.-)
(Quinol oxidase polypeptide I) (Cytochrome aa3 subunit
1) (Oxidase aa(3) subunit 1); n=5; Sulfolobaceae|Rep:
Quinol oxidase subunit 1 (EC 1.10.3.-) (Quinol oxidase
polypeptide I) (Cytochrome aa3 subunit 1) (Oxidase aa(3)
subunit 1) - Sulfolobus acidocaldarius
Length = 517
Score = 35.9 bits (79), Expect = 0.93
Identities = 13/34 (38%), Positives = 22/34 (64%)
Frame = +2
Query: 287 FTVGGLTGVILANSSIDITLHDTYYVVAHFHYVL 388
F + G ++L +SI+ H++YYVV HFH ++
Sbjct: 344 FILAGAQALVLPENSINPLFHNSYYVVGHFHLMI 377
>UniRef50_Q6RHX4 Cluster: Cytochrome c oxidase subunit I; n=26;
Endopterygota|Rep: Cytochrome c oxidase subunit I -
Partamona helleri
Length = 88
Score = 35.5 bits (78), Expect = 1.2
Identities = 12/17 (70%), Positives = 14/17 (82%)
Frame = +1
Query: 550 IPRRYSDYPDSYMSWKY 600
+PRRYSDYPDSY W +
Sbjct: 2 MPRRYSDYPDSYYCWNF 18
>UniRef50_A7D123 Cluster: Cytochrome-c oxidase; n=1; Halorubrum
lacusprofundi ATCC 49239|Rep: Cytochrome-c oxidase -
Halorubrum lacusprofundi ATCC 49239
Length = 597
Score = 34.7 bits (76), Expect = 2.1
Identities = 12/32 (37%), Positives = 21/32 (65%)
Frame = +2
Query: 284 LFTVGGLTGVILANSSIDITLHDTYYVVAHFH 379
+F GG +G++ A +I+ +H+T +V HFH
Sbjct: 358 MFAAGGFSGMVNAGMNINYMIHNTIWVPGHFH 389
>UniRef50_Q9KEW0 Cluster: Cytochrome c oxidase subunit I; n=8;
Bacillaceae|Rep: Cytochrome c oxidase subunit I -
Bacillus halodurans
Length = 564
Score = 34.3 bits (75), Expect = 2.8
Identities = 13/34 (38%), Positives = 22/34 (64%)
Frame = +2
Query: 278 VFLFTVGGLTGVILANSSIDITLHDTYYVVAHFH 379
+ F GG+ G+I A+ ++ +H+T +VV HFH
Sbjct: 353 MLFFIPGGIGGIINASFQLNEVVHNTLWVVGHFH 386
>UniRef50_Q8IE04 Cluster: Putative uncharacterized protein
MAL13P1.170; n=1; Plasmodium falciparum 3D7|Rep:
Putative uncharacterized protein MAL13P1.170 -
Plasmodium falciparum (isolate 3D7)
Length = 858
Score = 34.3 bits (75), Expect = 2.8
Identities = 18/60 (30%), Positives = 30/60 (50%)
Frame = -3
Query: 649 INYLIHREIYEPNEENYISMTYMSLDNLNIVEVFQLNLKNVEEKMLYYSNKYCKKLNF*Y 470
+ + IH + YE + N + S + NI++ F++N KN+ Y N KKL+ Y
Sbjct: 334 VEHGIHNKEYEARDRNTTNNVLKSNIHKNILKKFKINYKNLSSMEKEYYNYMIKKLDINY 393
>UniRef50_A0D443 Cluster: Chromosome undetermined scaffold_37, whole
genome shotgun sequence; n=1; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_37,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 1239
Score = 34.3 bits (75), Expect = 2.8
Identities = 18/60 (30%), Positives = 34/60 (56%), Gaps = 3/60 (5%)
Frame = -3
Query: 673 PQKSN*YFINYLIH---REIYEPNEENYISMTYMSLDNLNIVEVFQLNLKNVEEKMLYYS 503
PQ+ Y I +IH RE+ + E+N + +Y +L +++ V +++ N E M+YY+
Sbjct: 187 PQQLESYNITLIIHTNQREVIKKREDNTVEYSYQTLSQVDL-SVREISRSNSEGVMIYYA 245
>UniRef50_Q2VQT0 Cluster: Heme-copper oxygen reductase; n=1;
Rhodothermus marinus|Rep: Heme-copper oxygen reductase -
Rhodothermus marinus (Rhodothermus obamensis)
Length = 561
Score = 33.9 bits (74), Expect = 3.7
Identities = 13/31 (41%), Positives = 22/31 (70%)
Frame = +2
Query: 287 FTVGGLTGVILANSSIDITLHDTYYVVAHFH 379
F GG+TG+I A+ +++ +H+T +V HFH
Sbjct: 359 FVFGGITGLINASFTMNQVVHNTTWVPGHFH 389
>UniRef50_Q7R9D0 Cluster: Putative uncharacterized protein PY06932;
n=2; Plasmodium (Vinckeia)|Rep: Putative uncharacterized
protein PY06932 - Plasmodium yoelii yoelii
Length = 754
Score = 33.5 bits (73), Expect = 4.9
Identities = 22/64 (34%), Positives = 32/64 (50%), Gaps = 1/64 (1%)
Frame = -3
Query: 652 FINYLIHREIYEPNEENYISMTYMSLDNLNIVEVFQLNLKNVE-EKMLYYSNKYCKKLNF 476
F+NYLI+ YE E +I +L+N+ E Q+ LK+ E L Y Y K L +
Sbjct: 159 FMNYLIYNNYYEEQIERFI-FQVQNLENIINWEYIQILLKSEEYNNSLNYIKNYEKDLIY 217
Query: 475 *YIR 464
Y +
Sbjct: 218 LYTK 221
>UniRef50_Q9X1F9 Cluster: UPF0078 membrane protein TM_1447; n=2;
Thermotoga|Rep: UPF0078 membrane protein TM_1447 -
Thermotoga maritima
Length = 196
Score = 33.5 bits (73), Expect = 4.9
Identities = 16/41 (39%), Positives = 25/41 (60%)
Frame = +3
Query: 534 FRFSWNTSTIFRLSRLIYVMEI*FSSLGSYISLCIR*LIKY 656
F SW T +F L+ L+ VM ++SLGS ++L + L+ Y
Sbjct: 114 FCLSWPTGLVFTLTWLVIVMLTKYASLGSLVALYVSALLGY 154
>UniRef50_Q8IC29 Cluster: Putative uncharacterized protein
MAL7P1.17; n=1; Plasmodium falciparum 3D7|Rep: Putative
uncharacterized protein MAL7P1.17 - Plasmodium
falciparum (isolate 3D7)
Length = 3535
Score = 33.1 bits (72), Expect = 6.5
Identities = 12/32 (37%), Positives = 23/32 (71%)
Frame = -3
Query: 652 FINYLIHREIYEPNEENYISMTYMSLDNLNIV 557
+I+Y IH++ YE +++++S Y+S N NI+
Sbjct: 763 YISYNIHKDNYEQEKKDFLSTQYLSNKNRNII 794
>UniRef50_O07289 Cluster: Subunit I-homologue of cytochrome oxidase;
n=6; cellular organisms|Rep: Subunit I-homologue of
cytochrome oxidase - Natronomonas pharaonis
(Natronobacterium pharaonis)
Length = 581
Score = 33.1 bits (72), Expect = 6.5
Identities = 11/32 (34%), Positives = 21/32 (65%)
Frame = +2
Query: 284 LFTVGGLTGVILANSSIDITLHDTYYVVAHFH 379
+F +G++ A +I+ +H+T++VV HFH
Sbjct: 350 MFAAAAFSGMVNAGMNINYLVHNTWWVVGHFH 381
>UniRef50_A1RYT1 Cluster: Putative uncharacterized protein; n=1;
Thermofilum pendens Hrk 5|Rep: Putative uncharacterized
protein - Thermofilum pendens (strain Hrk 5)
Length = 518
Score = 33.1 bits (72), Expect = 6.5
Identities = 14/47 (29%), Positives = 28/47 (59%)
Frame = -3
Query: 649 INYLIHREIYEPNEENYISMTYMSLDNLNIVEVFQLNLKNVEEKMLY 509
I++LI + +P YI + Y L++LN+ ++F + + EEK ++
Sbjct: 78 IDHLISKSGIKPENVFYIPLDYKKLESLNLFDLFYVTAQLPEEKYIF 124
>UniRef50_Q981A5 Cluster: Heme bearing subunit I of the terminal
oxidase; n=8; Sulfolobaceae|Rep: Heme bearing subunit I
of the terminal oxidase - Sulfolobus solfataricus
Length = 593
Score = 32.7 bits (71), Expect = 8.6
Identities = 13/30 (43%), Positives = 20/30 (66%)
Frame = +2
Query: 299 GLTGVILANSSIDITLHDTYYVVAHFHYVL 388
G+TG+ A S D +H+T +VV HFH ++
Sbjct: 359 GVTGISNATISFDAIVHNTDWVVGHFHAMI 388
>UniRef50_Q56408 Cluster: Cytochrome c oxidase subunit 1 (EC
1.9.3.1) (Cytochrome c oxidase polypeptide I)
(Cytochrome c ba(3) subunit I); n=4; Deinococci|Rep:
Cytochrome c oxidase subunit 1 (EC 1.9.3.1) (Cytochrome
c oxidase polypeptide I) (Cytochrome c ba(3) subunit I)
- Thermus thermophilus
Length = 108
Score = 32.7 bits (71), Expect = 8.6
Identities = 12/31 (38%), Positives = 20/31 (64%)
Frame = +2
Query: 287 FTVGGLTGVILANSSIDITLHDTYYVVAHFH 379
F GG G++ A+ ++D +H+T +V HFH
Sbjct: 21 FIPGGAGGIVNASFTLDYVVHNTAWVPGHFH 51
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 439,844,161
Number of Sequences: 1657284
Number of extensions: 7097411
Number of successful extensions: 20389
Number of sequences better than 10.0: 115
Number of HSP's better than 10.0 without gapping: 19501
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 20357
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 53719013270
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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