Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= prgv0273
         (693 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB090824-2|BAC57924.1| 1248|Anopheles gambiae reverse transcript...    25   3.0  
AM422833-1|CAM12801.1| 2139|Anopheles gambiae voltage-gated sodi...    24   5.2  
AF043443-1|AAC05668.1|  232|Anopheles gambiae putative pupal-spe...    23   6.9  
AF043442-1|AAC05667.1|  231|Anopheles gambiae putative pupal-spe...    23   6.9  
AF043441-1|AAC05666.1|  231|Anopheles gambiae putative pupal-spe...    23   6.9  
AF043440-1|AAC05665.1|  234|Anopheles gambiae putative pupal-spe...    23   6.9  
AF043439-1|AAC05664.1|  239|Anopheles gambiae putative pupal-spe...    23   6.9  
AF043438-1|AAC05663.1|  231|Anopheles gambiae putative pupal-spe...    23   6.9  
AF043437-1|AAC05662.1|  239|Anopheles gambiae putative pupal-spe...    23   6.9  
AF043436-1|AAC05661.1|  263|Anopheles gambiae putative pupal-spe...    23   6.9  
AF043435-1|AAC05660.1|  231|Anopheles gambiae pupal-specific cut...    23   6.9  
AF043434-1|AAC05659.1|  232|Anopheles gambiae putative pupal-spe...    23   6.9  
AF043433-3|AAC05658.1|  231|Anopheles gambiae putative pupal-spe...    23   6.9  
AF043433-2|AAC05657.1|  239|Anopheles gambiae putative pupal-spe...    23   6.9  
CR954257-15|CAJ14166.1|  271|Anopheles gambiae predicted protein...    23   9.1  

>AB090824-2|BAC57924.1| 1248|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1248

 Score = 24.6 bits (51), Expect = 3.0
 Identities = 15/38 (39%), Positives = 18/38 (47%)
 Frame = +2

Query: 86  DSSVHIVTTPYRRPAPYSGYSRYL*IIARYFNGITCIY 199
           D SV IVT+  R P         L I+    NGIT +Y
Sbjct: 50  DKSVAIVTSGVRYPIQRIRSVTVLGIVVADVNGITIVY 87


>AM422833-1|CAM12801.1| 2139|Anopheles gambiae voltage-gated sodium
            channel alpha subunitprotein.
          Length = 2139

 Score = 23.8 bits (49), Expect = 5.2
 Identities = 10/32 (31%), Positives = 19/32 (59%)
 Frame = +2

Query: 557  VYILFWL*FIEVLIQ*YAALHYNLTVENKQTV 652
            V ++FWL F  + +Q +A  ++    +NK T+
Sbjct: 1440 VCLIFWLIFAIMGVQLFAGKYFKCVDKNKTTL 1471


>AF043443-1|AAC05668.1|  232|Anopheles gambiae putative
           pupal-specific cuticular proteinCP2d protein.
          Length = 232

 Score = 23.4 bits (48), Expect = 6.9
 Identities = 8/16 (50%), Positives = 11/16 (68%)
 Frame = -3

Query: 418 HDRKYGEMQSHHFTRH 371
           HD   G+++S H TRH
Sbjct: 99  HDEHTGDIKSQHETRH 114


>AF043442-1|AAC05667.1|  231|Anopheles gambiae putative
           pupal-specific cuticular proteinCP2c protein.
          Length = 231

 Score = 23.4 bits (48), Expect = 6.9
 Identities = 8/16 (50%), Positives = 11/16 (68%)
 Frame = -3

Query: 418 HDRKYGEMQSHHFTRH 371
           HD   G+++S H TRH
Sbjct: 91  HDEHTGDIKSQHETRH 106


>AF043441-1|AAC05666.1|  231|Anopheles gambiae putative
           pupal-specific cuticular proteinCP2b protein.
          Length = 231

 Score = 23.4 bits (48), Expect = 6.9
 Identities = 8/16 (50%), Positives = 11/16 (68%)
 Frame = -3

Query: 418 HDRKYGEMQSHHFTRH 371
           HD   G+++S H TRH
Sbjct: 91  HDEHTGDIKSQHETRH 106


>AF043440-1|AAC05665.1|  234|Anopheles gambiae putative
           pupal-specific cuticular proteinCP2d protein.
          Length = 234

 Score = 23.4 bits (48), Expect = 6.9
 Identities = 8/16 (50%), Positives = 11/16 (68%)
 Frame = -3

Query: 418 HDRKYGEMQSHHFTRH 371
           HD   G+++S H TRH
Sbjct: 91  HDEHTGDIKSQHETRH 106


>AF043439-1|AAC05664.1|  239|Anopheles gambiae putative
           pupal-specific cuticular proteinCP2b protein.
          Length = 239

 Score = 23.4 bits (48), Expect = 6.9
 Identities = 8/16 (50%), Positives = 11/16 (68%)
 Frame = -3

Query: 418 HDRKYGEMQSHHFTRH 371
           HD   G+++S H TRH
Sbjct: 99  HDEHTGDIKSQHETRH 114


>AF043438-1|AAC05663.1|  231|Anopheles gambiae putative
           pupal-specific cuticular proteinCP2b protein.
          Length = 231

 Score = 23.4 bits (48), Expect = 6.9
 Identities = 8/16 (50%), Positives = 11/16 (68%)
 Frame = -3

Query: 418 HDRKYGEMQSHHFTRH 371
           HD   G+++S H TRH
Sbjct: 91  HDEHTGDIKSQHETRH 106


>AF043437-1|AAC05662.1|  239|Anopheles gambiae putative
           pupal-specific cuticular proteinCP2b protein.
          Length = 239

 Score = 23.4 bits (48), Expect = 6.9
 Identities = 8/16 (50%), Positives = 11/16 (68%)
 Frame = -3

Query: 418 HDRKYGEMQSHHFTRH 371
           HD   G+++S H TRH
Sbjct: 99  HDEHTGDIKSQHETRH 114


>AF043436-1|AAC05661.1|  263|Anopheles gambiae putative
           pupal-specific cuticular proteinCP2c protein.
          Length = 263

 Score = 23.4 bits (48), Expect = 6.9
 Identities = 8/16 (50%), Positives = 11/16 (68%)
 Frame = -3

Query: 418 HDRKYGEMQSHHFTRH 371
           HD   G+++S H TRH
Sbjct: 123 HDEHTGDIKSQHETRH 138


>AF043435-1|AAC05660.1|  231|Anopheles gambiae pupal-specific
           cuticular protein CP2b protein.
          Length = 231

 Score = 23.4 bits (48), Expect = 6.9
 Identities = 8/16 (50%), Positives = 11/16 (68%)
 Frame = -3

Query: 418 HDRKYGEMQSHHFTRH 371
           HD   G+++S H TRH
Sbjct: 91  HDEHTGDIKSQHETRH 106


>AF043434-1|AAC05659.1|  232|Anopheles gambiae putative
           pupal-specific cuticular proteinCP2d protein.
          Length = 232

 Score = 23.4 bits (48), Expect = 6.9
 Identities = 8/16 (50%), Positives = 11/16 (68%)
 Frame = -3

Query: 418 HDRKYGEMQSHHFTRH 371
           HD   G+++S H TRH
Sbjct: 99  HDEHTGDIKSQHETRH 114


>AF043433-3|AAC05658.1|  231|Anopheles gambiae putative
           pupal-specific cuticular proteinprotein.
          Length = 231

 Score = 23.4 bits (48), Expect = 6.9
 Identities = 8/16 (50%), Positives = 11/16 (68%)
 Frame = -3

Query: 418 HDRKYGEMQSHHFTRH 371
           HD   G+++S H TRH
Sbjct: 91  HDEHTGDIKSQHETRH 106


>AF043433-2|AAC05657.1|  239|Anopheles gambiae putative
           pupal-specific cuticular proteinprotein.
          Length = 239

 Score = 23.4 bits (48), Expect = 6.9
 Identities = 8/16 (50%), Positives = 11/16 (68%)
 Frame = -3

Query: 418 HDRKYGEMQSHHFTRH 371
           HD   G+++S H TRH
Sbjct: 99  HDEHTGDIKSQHETRH 114


>CR954257-15|CAJ14166.1|  271|Anopheles gambiae predicted protein
           protein.
          Length = 271

 Score = 23.0 bits (47), Expect = 9.1
 Identities = 13/42 (30%), Positives = 22/42 (52%), Gaps = 7/42 (16%)
 Frame = +1

Query: 97  PHSNDALSTPCTLFWLLPLL----INY---CTLF*WHNMYLL 201
           P  NDA++    L  +LPL+    + Y   C L+ W+ + L+
Sbjct: 223 PARNDAMANKVVLLLVLPLIAVLGVAYGAICILYWWNRLLLI 264


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 697,996
Number of Sequences: 2352
Number of extensions: 12474
Number of successful extensions: 46
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 45
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 46
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 70250040
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)