Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= prgv0273
         (693 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ059645-1|AAZ04919.1|  837|Homo sapiens transient receptor pote...    30   6.8  
DQ059644-1|AAZ04918.1|  824|Homo sapiens transient receptor pote...    30   6.8  
BC117426-1|AAI17427.1|  871|Homo sapiens transient receptor pote...    30   6.8  
AJ296305-1|CAC82937.1|  871|Homo sapiens vanilloid receptor-like...    30   6.8  
AF279673-1|AAK69487.1|  803|Homo sapiens vanilloid receptor-like...    30   6.8  
AF263523-1|AAG28029.1|  871|Homo sapiens vanilloid receptor-rela...    30   6.8  
AF258465-1|AAG16127.1|  871|Homo sapiens OTRPC4 protein.               30   6.8  
AB100308-1|BAC55864.1|  853|Homo sapiens hypothetical protein pr...    30   6.8  
AB032427-1|BAB69040.1|  871|Homo sapiens vanilloid receptor like...    30   6.8  

>DQ059645-1|AAZ04919.1|  837|Homo sapiens transient receptor
           potencial vanilloid 4 channel variant D protein.
          Length = 837

 Score = 30.3 bits (65), Expect = 6.8
 Identities = 15/49 (30%), Positives = 26/49 (53%)
 Frame = -1

Query: 357 ISQQFESAQYKHLYENYYYSSRKKTINKWSDVLTIYNYNNNSMNSHQLL 211
           +S++F+   Y  +Y + Y  S   T  + + VL I  YN+   N H++L
Sbjct: 368 LSRKFKDWAYGPVYSSLYDLSSLDTCGEEASVLEILVYNSKIENRHEML 416


>DQ059644-1|AAZ04918.1|  824|Homo sapiens transient receptor
           potencial vanilloid 4 channel variant C protein.
          Length = 824

 Score = 30.3 bits (65), Expect = 6.8
 Identities = 15/49 (30%), Positives = 26/49 (53%)
 Frame = -1

Query: 357 ISQQFESAQYKHLYENYYYSSRKKTINKWSDVLTIYNYNNNSMNSHQLL 211
           +S++F+   Y  +Y + Y  S   T  + + VL I  YN+   N H++L
Sbjct: 355 LSRKFKDWAYGPVYSSLYDLSSLDTCGEEASVLEILVYNSKIENRHEML 403


>BC117426-1|AAI17427.1|  871|Homo sapiens transient receptor
           potential cation channel, subfamily V, member 4 protein.
          Length = 871

 Score = 30.3 bits (65), Expect = 6.8
 Identities = 15/49 (30%), Positives = 26/49 (53%)
 Frame = -1

Query: 357 ISQQFESAQYKHLYENYYYSSRKKTINKWSDVLTIYNYNNNSMNSHQLL 211
           +S++F+   Y  +Y + Y  S   T  + + VL I  YN+   N H++L
Sbjct: 402 LSRKFKDWAYGPVYSSLYDLSSLDTCGEEASVLEILVYNSKIENRHEML 450


>AJ296305-1|CAC82937.1|  871|Homo sapiens vanilloid receptor-like
           channel 2 protein.
          Length = 871

 Score = 30.3 bits (65), Expect = 6.8
 Identities = 15/49 (30%), Positives = 26/49 (53%)
 Frame = -1

Query: 357 ISQQFESAQYKHLYENYYYSSRKKTINKWSDVLTIYNYNNNSMNSHQLL 211
           +S++F+   Y  +Y + Y  S   T  + + VL I  YN+   N H++L
Sbjct: 402 LSRKFKDWAYGPVYSSLYDLSSLDTCGEEASVLEILVYNSKIENRHEML 450


>AF279673-1|AAK69487.1|  803|Homo sapiens vanilloid receptor-like
           protein 2 protein.
          Length = 803

 Score = 30.3 bits (65), Expect = 6.8
 Identities = 15/49 (30%), Positives = 26/49 (53%)
 Frame = -1

Query: 357 ISQQFESAQYKHLYENYYYSSRKKTINKWSDVLTIYNYNNNSMNSHQLL 211
           +S++F+   Y  +Y + Y  S   T  + + VL I  YN+   N H++L
Sbjct: 334 LSRKFKDWAYGPVYSSLYDLSSLDTCGEEASVLEILVYNSKIENRHEML 382


>AF263523-1|AAG28029.1|  871|Homo sapiens vanilloid receptor-related
           osmotically activated channel protein.
          Length = 871

 Score = 30.3 bits (65), Expect = 6.8
 Identities = 15/49 (30%), Positives = 26/49 (53%)
 Frame = -1

Query: 357 ISQQFESAQYKHLYENYYYSSRKKTINKWSDVLTIYNYNNNSMNSHQLL 211
           +S++F+   Y  +Y + Y  S   T  + + VL I  YN+   N H++L
Sbjct: 402 LSRKFKDWAYGPVYSSLYDLSSLDTCGEEASVLEILVYNSKIENRHEML 450


>AF258465-1|AAG16127.1|  871|Homo sapiens OTRPC4 protein.
          Length = 871

 Score = 30.3 bits (65), Expect = 6.8
 Identities = 15/49 (30%), Positives = 26/49 (53%)
 Frame = -1

Query: 357 ISQQFESAQYKHLYENYYYSSRKKTINKWSDVLTIYNYNNNSMNSHQLL 211
           +S++F+   Y  +Y + Y  S   T  + + VL I  YN+   N H++L
Sbjct: 402 LSRKFKDWAYGPVYSSLYDLSSLDTCGEEASVLEILVYNSKIENRHEML 450


>AB100308-1|BAC55864.1|  853|Homo sapiens hypothetical protein
           protein.
          Length = 853

 Score = 30.3 bits (65), Expect = 6.8
 Identities = 15/49 (30%), Positives = 26/49 (53%)
 Frame = -1

Query: 357 ISQQFESAQYKHLYENYYYSSRKKTINKWSDVLTIYNYNNNSMNSHQLL 211
           +S++F+   Y  +Y + Y  S   T  + + VL I  YN+   N H++L
Sbjct: 402 LSRKFKDWAYGPVYSSLYDLSSLDTCGEEASVLEILVYNSKIENRHEML 450


>AB032427-1|BAB69040.1|  871|Homo sapiens vanilloid receptor like
           channel-2 protein.
          Length = 871

 Score = 30.3 bits (65), Expect = 6.8
 Identities = 15/49 (30%), Positives = 26/49 (53%)
 Frame = -1

Query: 357 ISQQFESAQYKHLYENYYYSSRKKTINKWSDVLTIYNYNNNSMNSHQLL 211
           +S++F+   Y  +Y + Y  S   T  + + VL I  YN+   N H++L
Sbjct: 402 LSRKFKDWAYGPVYSSLYDLSSLDTCGEEASVLEILVYNSKIENRHEML 450


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 92,270,195
Number of Sequences: 237096
Number of extensions: 1725153
Number of successful extensions: 2795
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 2711
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2795
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 7951235188
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)