Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= prgv0273
         (693 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT016160-1|AAV37045.1|  574|Drosophila melanogaster AT09606p pro...    29   7.9  
AY052104-1|AAK93528.1|  712|Drosophila melanogaster SD05186p pro...    29   7.9  
AE014297-129|AAF52107.1| 1105|Drosophila melanogaster CG1059-PA ...    29   7.9  
AE014296-3012|AAF49266.2|  557|Drosophila melanogaster CG13700-P...    29   7.9  

>BT016160-1|AAV37045.1|  574|Drosophila melanogaster AT09606p
           protein.
          Length = 574

 Score = 28.7 bits (61), Expect = 7.9
 Identities = 26/108 (24%), Positives = 48/108 (44%), Gaps = 9/108 (8%)
 Frame = -1

Query: 603 YCIKTSINYNQNSMYTLQAIM*ILTK-----QHN-ILQT*CVISFDFVKSG-HLSSFRTS 445
           YC  T +NY  N+MY++  +    ++     Q+N    T C  S +  +   H +    S
Sbjct: 255 YCYSTPLNYQGNAMYSMPGMQMDESQRGGGGQNNRETGTKCQTSSESSEENCHSNGDSAS 314

Query: 444 NMYNHGTVDMTVNMEKCNRTISP--GINR*GISQQFESAQYKHLYENY 307
              +   +DM   M+K  +++       + GI Q F +AQ +  + N+
Sbjct: 315 FHQSPNNLDMEAFMQKYQKSVQQCYATAQQGIQQSFANAQSQPYFNNF 362


>AY052104-1|AAK93528.1|  712|Drosophila melanogaster SD05186p
           protein.
          Length = 712

 Score = 28.7 bits (61), Expect = 7.9
 Identities = 12/27 (44%), Positives = 19/27 (70%)
 Frame = +3

Query: 12  QIQSNAELFNSCLMTLSNDHKEALQIA 92
           Q++SN E+  +C  TLS + ++ALQ A
Sbjct: 676 QVESNPEVMAACASTLSPEQQQALQDA 702


>AE014297-129|AAF52107.1| 1105|Drosophila melanogaster CG1059-PA
            protein.
          Length = 1105

 Score = 28.7 bits (61), Expect = 7.9
 Identities = 12/27 (44%), Positives = 19/27 (70%)
 Frame = +3

Query: 12   QIQSNAELFNSCLMTLSNDHKEALQIA 92
            Q++SN E+  +C  TLS + ++ALQ A
Sbjct: 1069 QVESNPEVMAACASTLSPEQQQALQDA 1095


>AE014296-3012|AAF49266.2|  557|Drosophila melanogaster CG13700-PA
           protein.
          Length = 557

 Score = 28.7 bits (61), Expect = 7.9
 Identities = 26/108 (24%), Positives = 48/108 (44%), Gaps = 9/108 (8%)
 Frame = -1

Query: 603 YCIKTSINYNQNSMYTLQAIM*ILTK-----QHN-ILQT*CVISFDFVKSG-HLSSFRTS 445
           YC  T +NY  N+MY++  +    ++     Q+N    T C  S +  +   H +    S
Sbjct: 255 YCYSTPLNYQGNAMYSMPGMQMDESQRGGGGQNNRETGTKCQTSSESSEENCHSNGDSAS 314

Query: 444 NMYNHGTVDMTVNMEKCNRTISP--GINR*GISQQFESAQYKHLYENY 307
              +   +DM   M+K  +++       + GI Q F +AQ +  + N+
Sbjct: 315 FHQSPNNLDMEAFMQKYQKSVQQCYATAQQGIQQSFANAQSQPYFNNF 362


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 28,770,509
Number of Sequences: 53049
Number of extensions: 558556
Number of successful extensions: 1422
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 1375
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1422
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3026039247
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)