Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= prgv0273
(693 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ325076-1|ABD14090.1| 191|Apis mellifera complementary sex det... 24 1.2
AY395072-1|AAQ96728.1| 593|Apis mellifera GABA neurotransmitter... 24 1.2
AY395071-1|AAQ96727.1| 646|Apis mellifera GABA neurotransmitter... 24 1.2
DQ257631-1|ABB82366.1| 424|Apis mellifera yellow e3-like protei... 24 1.6
AM050259-1|CAJ18340.1| 683|Apis mellifera putative H3K9 methylt... 24 1.6
U70841-1|AAC47455.1| 377|Apis mellifera ultraviolet sensitive o... 23 2.1
AF004168-1|AAC13417.1| 377|Apis mellifera blue-sensitive opsin ... 23 2.1
DQ325089-1|ABD14103.1| 185|Apis mellifera complementary sex det... 23 3.6
DQ325088-1|ABD14102.1| 185|Apis mellifera complementary sex det... 23 3.6
DQ325081-1|ABD14095.1| 186|Apis mellifera complementary sex det... 23 3.6
DQ325080-1|ABD14094.1| 184|Apis mellifera complementary sex det... 23 3.6
DQ325079-1|ABD14093.1| 184|Apis mellifera complementary sex det... 23 3.6
DQ325078-1|ABD14092.1| 184|Apis mellifera complementary sex det... 23 3.6
AY350617-1|AAQ57659.1| 428|Apis mellifera complementary sex det... 23 3.6
DQ325115-1|ABD14129.1| 185|Apis mellifera complementary sex det... 22 4.8
DQ325075-1|ABD14089.1| 181|Apis mellifera complementary sex det... 22 4.8
DQ325074-1|ABD14088.1| 181|Apis mellifera complementary sex det... 22 4.8
DQ325073-1|ABD14087.1| 181|Apis mellifera complementary sex det... 22 4.8
DQ325072-1|ABD14086.1| 181|Apis mellifera complementary sex det... 22 4.8
DQ325071-1|ABD14085.1| 181|Apis mellifera complementary sex det... 22 4.8
DQ325070-1|ABD14084.1| 181|Apis mellifera complementary sex det... 22 4.8
DQ325069-1|ABD14083.1| 181|Apis mellifera complementary sex det... 22 4.8
DQ325068-1|ABD14082.1| 181|Apis mellifera complementary sex det... 22 4.8
AY569705-1|AAS86658.1| 419|Apis mellifera complementary sex det... 22 4.8
AY569696-1|AAS86649.1| 414|Apis mellifera complementary sex det... 22 4.8
AY569695-1|AAS86648.1| 414|Apis mellifera complementary sex det... 22 4.8
DQ667194-1|ABG75746.1| 391|Apis mellifera cys-loop ligand-gated... 22 6.4
DQ325133-1|ABD14147.1| 181|Apis mellifera complementary sex det... 22 6.4
DQ325087-1|ABD14101.1| 179|Apis mellifera complementary sex det... 22 6.4
DQ325086-1|ABD14100.1| 179|Apis mellifera complementary sex det... 22 6.4
DQ325085-1|ABD14099.1| 179|Apis mellifera complementary sex det... 22 6.4
DQ325084-1|ABD14098.1| 179|Apis mellifera complementary sex det... 22 6.4
DQ325083-1|ABD14097.1| 189|Apis mellifera complementary sex det... 22 6.4
DQ325077-1|ABD14091.1| 181|Apis mellifera complementary sex det... 21 8.4
AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein. 21 8.4
AY569704-1|AAS86657.1| 426|Apis mellifera complementary sex det... 21 8.4
>DQ325076-1|ABD14090.1| 191|Apis mellifera complementary sex
determiner protein.
Length = 191
Score = 24.2 bits (50), Expect = 1.2
Identities = 8/14 (57%), Positives = 12/14 (85%)
Frame = -1
Query: 252 YNYNNNSMNSHQLL 211
YNYNNN+ N+++ L
Sbjct: 104 YNYNNNNYNNYKKL 117
>AY395072-1|AAQ96728.1| 593|Apis mellifera GABA neurotransmitter
transporter-1B protein.
Length = 593
Score = 24.2 bits (50), Expect = 1.2
Identities = 10/25 (40%), Positives = 16/25 (64%), Gaps = 3/25 (12%)
Frame = +2
Query: 503 YVCSMLCCFVNIY---IIAWSVYIL 568
Y +L C+ NIY I+AW+++ L
Sbjct: 102 YATCVLSCWTNIYYIIILAWALFYL 126
>AY395071-1|AAQ96727.1| 646|Apis mellifera GABA neurotransmitter
transporter-1B protein.
Length = 646
Score = 24.2 bits (50), Expect = 1.2
Identities = 10/25 (40%), Positives = 16/25 (64%), Gaps = 3/25 (12%)
Frame = +2
Query: 503 YVCSMLCCFVNIY---IIAWSVYIL 568
Y +L C+ NIY I+AW+++ L
Sbjct: 155 YATCVLSCWTNIYYIIILAWALFYL 179
>DQ257631-1|ABB82366.1| 424|Apis mellifera yellow e3-like protein
protein.
Length = 424
Score = 23.8 bits (49), Expect = 1.6
Identities = 14/35 (40%), Positives = 17/35 (48%)
Frame = -1
Query: 495 ISFDFVKSGHLSSFRTSNMYNHGTVDMTVNMEKCN 391
ISF SG L+S T+ G VD V KC+
Sbjct: 379 ISFQKYMSGTLNSNETNFRIQAGLVDELVRGTKCD 413
>AM050259-1|CAJ18340.1| 683|Apis mellifera putative H3K9
methyltransferase protein.
Length = 683
Score = 23.8 bits (49), Expect = 1.6
Identities = 12/42 (28%), Positives = 20/42 (47%)
Frame = -1
Query: 384 ISPGINR*GISQQFESAQYKHLYENYYYSSRKKTINKWSDVL 259
+ P + Q+F Q + +NY+YS + + SDVL
Sbjct: 117 VQPPTKHQKLDQKFIFPQENNYNDNYFYSKSNGSNSSNSDVL 158
>U70841-1|AAC47455.1| 377|Apis mellifera ultraviolet sensitive
opsin protein.
Length = 377
Score = 23.4 bits (48), Expect = 2.1
Identities = 13/43 (30%), Positives = 18/43 (41%)
Frame = +3
Query: 288 SFEKNNNSFHISAYIGLIRIAVIYLTGLCLVKWCDCISPYLRS 416
+F FHI I + ++ L G C V W S LR+
Sbjct: 48 AFPAPGKHFHIGLAIIYSMLLIMSLVGNCCVIWIFSTSKSLRT 90
>AF004168-1|AAC13417.1| 377|Apis mellifera blue-sensitive opsin
protein.
Length = 377
Score = 23.4 bits (48), Expect = 2.1
Identities = 13/43 (30%), Positives = 18/43 (41%)
Frame = +3
Query: 288 SFEKNNNSFHISAYIGLIRIAVIYLTGLCLVKWCDCISPYLRS 416
+F FHI I + ++ L G C V W S LR+
Sbjct: 48 AFPAPGKHFHIGLAIIYSMLLIMSLVGNCCVIWIFSTSKSLRT 90
>DQ325089-1|ABD14103.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 22.6 bits (46), Expect = 3.6
Identities = 7/11 (63%), Positives = 10/11 (90%)
Frame = -1
Query: 252 YNYNNNSMNSH 220
YNYNNN+ N++
Sbjct: 96 YNYNNNNYNNN 106
>DQ325088-1|ABD14102.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 22.6 bits (46), Expect = 3.6
Identities = 7/11 (63%), Positives = 10/11 (90%)
Frame = -1
Query: 252 YNYNNNSMNSH 220
YNYNNN+ N++
Sbjct: 96 YNYNNNNYNNN 106
>DQ325081-1|ABD14095.1| 186|Apis mellifera complementary sex
determiner protein.
Length = 186
Score = 22.6 bits (46), Expect = 3.6
Identities = 7/11 (63%), Positives = 10/11 (90%)
Frame = -1
Query: 252 YNYNNNSMNSH 220
YNYNNN+ N++
Sbjct: 98 YNYNNNNYNNN 108
>DQ325080-1|ABD14094.1| 184|Apis mellifera complementary sex
determiner protein.
Length = 184
Score = 22.6 bits (46), Expect = 3.6
Identities = 7/11 (63%), Positives = 10/11 (90%)
Frame = -1
Query: 252 YNYNNNSMNSH 220
YNYNNN+ N++
Sbjct: 98 YNYNNNNYNNN 108
>DQ325079-1|ABD14093.1| 184|Apis mellifera complementary sex
determiner protein.
Length = 184
Score = 22.6 bits (46), Expect = 3.6
Identities = 7/11 (63%), Positives = 10/11 (90%)
Frame = -1
Query: 252 YNYNNNSMNSH 220
YNYNNN+ N++
Sbjct: 98 YNYNNNNYNNN 108
>DQ325078-1|ABD14092.1| 184|Apis mellifera complementary sex
determiner protein.
Length = 184
Score = 22.6 bits (46), Expect = 3.6
Identities = 7/11 (63%), Positives = 10/11 (90%)
Frame = -1
Query: 252 YNYNNNSMNSH 220
YNYNNN+ N++
Sbjct: 98 YNYNNNNYNNN 108
>AY350617-1|AAQ57659.1| 428|Apis mellifera complementary sex
determiner protein.
Length = 428
Score = 22.6 bits (46), Expect = 3.6
Identities = 7/11 (63%), Positives = 10/11 (90%)
Frame = -1
Query: 252 YNYNNNSMNSH 220
YNYNNN+ N++
Sbjct: 331 YNYNNNNYNNN 341
>DQ325115-1|ABD14129.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 22.2 bits (45), Expect = 4.8
Identities = 10/25 (40%), Positives = 13/25 (52%)
Frame = -1
Query: 300 SSRKKTINKWSDVLTIYNYNNNSMN 226
S K I+ + + YNYNNN N
Sbjct: 76 SKEPKIISNNNSLSNNYNYNNNYNN 100
>DQ325075-1|ABD14089.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 22.2 bits (45), Expect = 4.8
Identities = 10/25 (40%), Positives = 13/25 (52%)
Frame = -1
Query: 300 SSRKKTINKWSDVLTIYNYNNNSMN 226
S K I+ + + YNYNNN N
Sbjct: 76 SKEPKIISNNNSLSNNYNYNNNYNN 100
>DQ325074-1|ABD14088.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 22.2 bits (45), Expect = 4.8
Identities = 10/25 (40%), Positives = 13/25 (52%)
Frame = -1
Query: 300 SSRKKTINKWSDVLTIYNYNNNSMN 226
S K I+ + + YNYNNN N
Sbjct: 76 SKEPKIISNNNSLSNNYNYNNNYNN 100
>DQ325073-1|ABD14087.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 22.2 bits (45), Expect = 4.8
Identities = 10/25 (40%), Positives = 13/25 (52%)
Frame = -1
Query: 300 SSRKKTINKWSDVLTIYNYNNNSMN 226
S K I+ + + YNYNNN N
Sbjct: 76 SKEPKIISNNNSLSNNYNYNNNYNN 100
>DQ325072-1|ABD14086.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 22.2 bits (45), Expect = 4.8
Identities = 10/25 (40%), Positives = 13/25 (52%)
Frame = -1
Query: 300 SSRKKTINKWSDVLTIYNYNNNSMN 226
S K I+ + + YNYNNN N
Sbjct: 76 SKEPKIISNNNSLSNNYNYNNNYNN 100
>DQ325071-1|ABD14085.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 22.2 bits (45), Expect = 4.8
Identities = 10/25 (40%), Positives = 13/25 (52%)
Frame = -1
Query: 300 SSRKKTINKWSDVLTIYNYNNNSMN 226
S K I+ + + YNYNNN N
Sbjct: 76 SKEPKIISNNNSLSNNYNYNNNYNN 100
>DQ325070-1|ABD14084.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 22.2 bits (45), Expect = 4.8
Identities = 10/25 (40%), Positives = 13/25 (52%)
Frame = -1
Query: 300 SSRKKTINKWSDVLTIYNYNNNSMN 226
S K I+ + + YNYNNN N
Sbjct: 76 SKEPKIISNNNSLSNNYNYNNNYNN 100
>DQ325069-1|ABD14083.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 22.2 bits (45), Expect = 4.8
Identities = 10/25 (40%), Positives = 13/25 (52%)
Frame = -1
Query: 300 SSRKKTINKWSDVLTIYNYNNNSMN 226
S K I+ + + YNYNNN N
Sbjct: 76 SKEPKIISNNNSLSNNYNYNNNYNN 100
>DQ325068-1|ABD14082.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 22.2 bits (45), Expect = 4.8
Identities = 10/25 (40%), Positives = 13/25 (52%)
Frame = -1
Query: 300 SSRKKTINKWSDVLTIYNYNNNSMN 226
S K I+ + + YNYNNN N
Sbjct: 76 SKEPKIISNNNSLSNNYNYNNNYNN 100
>AY569705-1|AAS86658.1| 419|Apis mellifera complementary sex
determiner protein.
Length = 419
Score = 22.2 bits (45), Expect = 4.8
Identities = 8/19 (42%), Positives = 13/19 (68%)
Frame = -1
Query: 276 KWSDVLTIYNYNNNSMNSH 220
K+S+ NYNNN+ N++
Sbjct: 323 KYSNYNNYNNYNNNNYNNY 341
>AY569696-1|AAS86649.1| 414|Apis mellifera complementary sex
determiner protein.
Length = 414
Score = 22.2 bits (45), Expect = 4.8
Identities = 10/25 (40%), Positives = 13/25 (52%)
Frame = -1
Query: 300 SSRKKTINKWSDVLTIYNYNNNSMN 226
S K I+ + + YNYNNN N
Sbjct: 309 SKEPKIISNNNSLSNNYNYNNNYNN 333
>AY569695-1|AAS86648.1| 414|Apis mellifera complementary sex
determiner protein.
Length = 414
Score = 22.2 bits (45), Expect = 4.8
Identities = 10/25 (40%), Positives = 13/25 (52%)
Frame = -1
Query: 300 SSRKKTINKWSDVLTIYNYNNNSMN 226
S K I+ + + YNYNNN N
Sbjct: 309 SKEPKIISNNNSLSNNYNYNNNYNN 333
>DQ667194-1|ABG75746.1| 391|Apis mellifera cys-loop ligand-gated
ion channel subunit protein.
Length = 391
Score = 21.8 bits (44), Expect = 6.4
Identities = 9/23 (39%), Positives = 16/23 (69%)
Frame = -1
Query: 111 VVTMWTELSEELPCGRYLKS*DM 43
+VTM+T L ++P Y+K+ D+
Sbjct: 242 LVTMFTGLKSDIPPVAYVKALDV 264
>DQ325133-1|ABD14147.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.8 bits (44), Expect = 6.4
Identities = 10/25 (40%), Positives = 13/25 (52%)
Frame = -1
Query: 300 SSRKKTINKWSDVLTIYNYNNNSMN 226
S K I+ + + YNYNNN N
Sbjct: 76 SKEPKIISNNNPLSNNYNYNNNYNN 100
>DQ325087-1|ABD14101.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 21.8 bits (44), Expect = 6.4
Identities = 7/9 (77%), Positives = 8/9 (88%)
Frame = -1
Query: 252 YNYNNNSMN 226
YNYNNN+ N
Sbjct: 97 YNYNNNNYN 105
>DQ325086-1|ABD14100.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 21.8 bits (44), Expect = 6.4
Identities = 7/9 (77%), Positives = 8/9 (88%)
Frame = -1
Query: 252 YNYNNNSMN 226
YNYNNN+ N
Sbjct: 97 YNYNNNNYN 105
>DQ325085-1|ABD14099.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 21.8 bits (44), Expect = 6.4
Identities = 7/9 (77%), Positives = 8/9 (88%)
Frame = -1
Query: 252 YNYNNNSMN 226
YNYNNN+ N
Sbjct: 97 YNYNNNNYN 105
>DQ325084-1|ABD14098.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 21.8 bits (44), Expect = 6.4
Identities = 7/9 (77%), Positives = 8/9 (88%)
Frame = -1
Query: 252 YNYNNNSMN 226
YNYNNN+ N
Sbjct: 97 YNYNNNNYN 105
>DQ325083-1|ABD14097.1| 189|Apis mellifera complementary sex
determiner protein.
Length = 189
Score = 21.8 bits (44), Expect = 6.4
Identities = 7/9 (77%), Positives = 8/9 (88%)
Frame = -1
Query: 252 YNYNNNSMN 226
YNYNNN+ N
Sbjct: 104 YNYNNNNYN 112
>DQ325077-1|ABD14091.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.4 bits (43), Expect = 8.4
Identities = 7/13 (53%), Positives = 11/13 (84%)
Frame = -1
Query: 249 NYNNNSMNSHQLL 211
NYNNN+ N+++ L
Sbjct: 95 NYNNNNYNNYKKL 107
>AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.
Length = 1946
Score = 21.4 bits (43), Expect = 8.4
Identities = 13/35 (37%), Positives = 18/35 (51%)
Frame = -3
Query: 112 RRYYVDRAI*RASLWSLLKVMRHELNNSAFDCICP 8
+R V R+I S W + M ELN+ A + CP
Sbjct: 1668 KRGTVIRSIRSHSTWDPRRHMYEELNHCAPNRRCP 1702
>AY569704-1|AAS86657.1| 426|Apis mellifera complementary sex
determiner protein.
Length = 426
Score = 21.4 bits (43), Expect = 8.4
Identities = 7/13 (53%), Positives = 11/13 (84%)
Frame = -1
Query: 249 NYNNNSMNSHQLL 211
NYNNN+ N+++ L
Sbjct: 340 NYNNNNYNNYKKL 352
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 190,723
Number of Sequences: 438
Number of extensions: 4102
Number of successful extensions: 41
Number of sequences better than 10.0: 36
Number of HSP's better than 10.0 without gapping: 41
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 41
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 21195810
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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