Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= prgv0272
         (692 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q229I1 Cluster: Putative uncharacterized protein; n=2; ...    36   1.2  
UniRef50_UPI0000499E66 Cluster: conserved hypothetical protein; ...    33   6.6  
UniRef50_Q8I2W8 Cluster: Putative uncharacterized protein PFI090...    33   6.6  
UniRef50_Q7RN72 Cluster: Putative uncharacterized protein PY0195...    33   6.6  

>UniRef50_Q229I1 Cluster: Putative uncharacterized protein; n=2;
           Tetrahymena thermophila SB210|Rep: Putative
           uncharacterized protein - Tetrahymena thermophila SB210
          Length = 845

 Score = 35.5 bits (78), Expect = 1.2
 Identities = 18/64 (28%), Positives = 34/64 (53%), Gaps = 5/64 (7%)
 Frame = +3

Query: 270 LINIFL--FYQLQVHFNV---IYYKTQMFFTSALYREITVIVFLFHKIEFLILFQCIFLQ 434
           + N+F+  F+Q+++H N+   I+ +T +F    L      + FL H + FLI F   ++ 
Sbjct: 54  IFNVFIIQFFQIEIHINIYLFIFIQTNIFLAINLNFYFHFLFFLIHFLFFLIHFLLFYIF 113

Query: 435 QHTI 446
            H +
Sbjct: 114 SHLL 117


>UniRef50_UPI0000499E66 Cluster: conserved hypothetical protein;
           n=1; Entamoeba histolytica HM-1:IMSS|Rep: conserved
           hypothetical protein - Entamoeba histolytica HM-1:IMSS
          Length = 485

 Score = 33.1 bits (72), Expect = 6.6
 Identities = 19/59 (32%), Positives = 31/59 (52%)
 Frame = -3

Query: 423 CIEIKSRILFYEIKKLLR*FHGTVQR*KTFEFYNKLH*SGPEVDKIKKY*LIVFIFDVL 247
           CI +K  + F  +  LL   H  +Q+  T   YNK++     +D IKK  L+ F+ ++L
Sbjct: 331 CIHVKDDLHFECVSILLLDLHKFIQKKTTIGLYNKIY---EFIDDIKKSSLVQFVIELL 386


>UniRef50_Q8I2W8 Cluster: Putative uncharacterized protein PFI0905w;
           n=1; Plasmodium falciparum 3D7|Rep: Putative
           uncharacterized protein PFI0905w - Plasmodium falciparum
           (isolate 3D7)
          Length = 160

 Score = 33.1 bits (72), Expect = 6.6
 Identities = 30/107 (28%), Positives = 51/107 (47%), Gaps = 2/107 (1%)
 Frame = +3

Query: 264 TQLINIFLFYQLQVHFNV-IYYKTQMFFTSALYREITVIVFLFHKIEFLILFQCIFLQQH 440
           T+L+   L   + +H N  +++    FF   LY+++ V+ FLFH I F   F   F   H
Sbjct: 18  TKLLECTLLMFINLHANFFLFFFLYFFFFLFLYKDV-VLFFLFHFISFFFFF---FSFPH 73

Query: 441 TITNH**FK-YNKISSNNLKVMKRFECEPM*T*FTARIFFLKTKIII 578
              N    +   KI+++  +V+ R   E       +  FFL+ K+I+
Sbjct: 74  FFPNILILECLKKINNHEHEVVYRIRAEVN----KSVYFFLQIKLIV 116


>UniRef50_Q7RN72 Cluster: Putative uncharacterized protein PY01950;
           n=5; Plasmodium (Vinckeia)|Rep: Putative uncharacterized
           protein PY01950 - Plasmodium yoelii yoelii
          Length = 676

 Score = 33.1 bits (72), Expect = 6.6
 Identities = 18/43 (41%), Positives = 23/43 (53%), Gaps = 1/43 (2%)
 Frame = +2

Query: 524 NVNLIYSQNLFF-KNKNYYFSSRYYNL*SVLCIIDYHREFINY 649
           NV L+Y  N FF +N    FS   + L   +CI+D    FINY
Sbjct: 485 NVILLYDLNFFFIENFFNIFSKHCFPLSYAICIVDIITNFINY 527


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 571,147,872
Number of Sequences: 1657284
Number of extensions: 10051465
Number of successful extensions: 14287
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 13641
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14275
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 54545459628
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)