Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= prgv0271
         (690 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY884064-1|AAX84205.1|  683|Tribolium castaneum pro-phenol oxida...    22   4.1  
AY887136-1|AAW78361.1|  580|Tribolium castaneum vasa RNA helicas...    22   5.4  
AY362543-1|AAQ63455.1|  677|Tribolium castaneum chitin synthase ...    21   7.2  
AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ...    21   7.2  
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ...    21   7.2  
AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory recept...    21   9.5  
AM292345-1|CAL23157.2|  384|Tribolium castaneum gustatory recept...    21   9.5  

>AY884064-1|AAX84205.1|  683|Tribolium castaneum pro-phenol oxidase
           subunit 2 protein.
          Length = 683

 Score = 22.2 bits (45), Expect = 4.1
 Identities = 9/17 (52%), Positives = 12/17 (70%)
 Frame = -2

Query: 677 GRNAITRPTSCSYTTVP 627
           G+N ITR +S S  T+P
Sbjct: 537 GQNTITRASSQSSVTIP 553


>AY887136-1|AAW78361.1|  580|Tribolium castaneum vasa RNA helicase
           protein.
          Length = 580

 Score = 21.8 bits (44), Expect = 5.4
 Identities = 10/18 (55%), Positives = 10/18 (55%)
 Frame = -1

Query: 561 DDSNLHRGGGRSPPTGAG 508
           DDS   RGGGR    G G
Sbjct: 89  DDSGGGRGGGRDGDRGDG 106


>AY362543-1|AAQ63455.1|  677|Tribolium castaneum chitin synthase
           protein.
          Length = 677

 Score = 21.4 bits (43), Expect = 7.2
 Identities = 9/37 (24%), Positives = 13/37 (35%)
 Frame = -3

Query: 472 YLKQSWIWKIICPKRYFIFLAPQISCS*NYSKTSTVF 362
           Y+   W+W I     Y  +   + SC       S  F
Sbjct: 128 YMTGIWVWLINISATYICYAFGKFSCKVMIQSVSFAF 164


>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
           protein.
          Length = 1464

 Score = 21.4 bits (43), Expect = 7.2
 Identities = 9/37 (24%), Positives = 13/37 (35%)
 Frame = -3

Query: 472 YLKQSWIWKIICPKRYFIFLAPQISCS*NYSKTSTVF 362
           Y+   W+W I     Y  +   + SC       S  F
Sbjct: 361 YMTGIWVWLINISATYICYAFGKFSCKVMIQSVSFAF 397


>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase
           CHS2 protein.
          Length = 1464

 Score = 21.4 bits (43), Expect = 7.2
 Identities = 9/37 (24%), Positives = 13/37 (35%)
 Frame = -3

Query: 472 YLKQSWIWKIICPKRYFIFLAPQISCS*NYSKTSTVF 362
           Y+   W+W I     Y  +   + SC       S  F
Sbjct: 361 YMTGIWVWLINISATYICYAFGKFSCKVMIQSVSFAF 397


>AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory receptor
           candidate 53 protein.
          Length = 659

 Score = 21.0 bits (42), Expect = 9.5
 Identities = 11/48 (22%), Positives = 23/48 (47%)
 Frame = +1

Query: 16  VIYIIFNSNTFIVSTVHTVTKIIILKI*QDRVAV*YFYSSTLASSFVD 159
           ++Y ++ + T+    ++  T IIIL +    V   +  + T    FV+
Sbjct: 333 ILYCVYTTATYDSFMIYKTTNIIILGLNVVYVVTAWICAITKRDMFVE 380


>AM292345-1|CAL23157.2|  384|Tribolium castaneum gustatory receptor
           candidate 24 protein.
          Length = 384

 Score = 21.0 bits (42), Expect = 9.5
 Identities = 11/48 (22%), Positives = 23/48 (47%)
 Frame = +1

Query: 16  VIYIIFNSNTFIVSTVHTVTKIIILKI*QDRVAV*YFYSSTLASSFVD 159
           ++Y ++ + T+    ++  T IIIL +    V   +  + T    FV+
Sbjct: 58  ILYCVYTTATYDSFMIYKTTNIIILGLNVVYVVTAWICAITKRDMFVE 105


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 156,088
Number of Sequences: 336
Number of extensions: 3464
Number of successful extensions: 12
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18114270
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)