Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= prgv0271
         (690 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY705404-1|AAU12513.1|  406|Anopheles gambiae nicotinic acetylch...    24   5.2  
AY341178-1|AAR13742.1|  230|Anopheles gambiae ferredoxin reducta...    24   5.2  
AY341177-1|AAR13741.1|  230|Anopheles gambiae ferredoxin reducta...    24   5.2  
AY341176-1|AAR13740.1|  230|Anopheles gambiae ferredoxin reducta...    24   5.2  
AY341175-1|AAR13739.1|  230|Anopheles gambiae ferredoxin reducta...    24   5.2  

>AY705404-1|AAU12513.1|  406|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 9 protein.
          Length = 406

 Score = 23.8 bits (49), Expect = 5.2
 Identities = 8/28 (28%), Positives = 18/28 (64%)
 Frame = +1

Query: 13  TVIYIIFNSNTFIVSTVHTVTKIIILKI 96
           T + +IF SNT +++   T+  +I++ +
Sbjct: 303 TPLIVIFFSNTLLLTAFSTIICVIVMNL 330


>AY341178-1|AAR13742.1|  230|Anopheles gambiae ferredoxin reductase
           protein.
          Length = 230

 Score = 23.8 bits (49), Expect = 5.2
 Identities = 14/54 (25%), Positives = 23/54 (42%)
 Frame = -3

Query: 586 AVSPLQVTGRQ*PSPGGREVASYRGRVEHKSFSGKQTIYLKQSWIWKIICPKRY 425
           A +P+     Q  + G   +A Y GRV   +  GK T      + W ++  K +
Sbjct: 104 ANAPVHSNDGQQATIGHYPLAQYHGRVAALNMIGKATPLKAVPFFWTVLFGKSF 157


>AY341177-1|AAR13741.1|  230|Anopheles gambiae ferredoxin reductase
           protein.
          Length = 230

 Score = 23.8 bits (49), Expect = 5.2
 Identities = 14/54 (25%), Positives = 23/54 (42%)
 Frame = -3

Query: 586 AVSPLQVTGRQ*PSPGGREVASYRGRVEHKSFSGKQTIYLKQSWIWKIICPKRY 425
           A +P+     Q  + G   +A Y GRV   +  GK T      + W ++  K +
Sbjct: 104 ANAPVHSNDGQQATIGHYPLAQYHGRVAALNMIGKATPLKAVPFFWTVLFGKSF 157


>AY341176-1|AAR13740.1|  230|Anopheles gambiae ferredoxin reductase
           protein.
          Length = 230

 Score = 23.8 bits (49), Expect = 5.2
 Identities = 14/54 (25%), Positives = 23/54 (42%)
 Frame = -3

Query: 586 AVSPLQVTGRQ*PSPGGREVASYRGRVEHKSFSGKQTIYLKQSWIWKIICPKRY 425
           A +P+     Q  + G   +A Y GRV   +  GK T      + W ++  K +
Sbjct: 104 ANAPVHSNDGQQATIGHYPLAQYHGRVAALNMIGKATPLKAVPFFWTVLFGKSF 157


>AY341175-1|AAR13739.1|  230|Anopheles gambiae ferredoxin reductase
           protein.
          Length = 230

 Score = 23.8 bits (49), Expect = 5.2
 Identities = 14/54 (25%), Positives = 23/54 (42%)
 Frame = -3

Query: 586 AVSPLQVTGRQ*PSPGGREVASYRGRVEHKSFSGKQTIYLKQSWIWKIICPKRY 425
           A +P+     Q  + G   +A Y GRV   +  GK T      + W ++  K +
Sbjct: 104 ANAPVHSNDGQQATIGHYPLAQYHGRVAALNMIGKATPLKAVPFFWTVLFGKSF 157


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 678,549
Number of Sequences: 2352
Number of extensions: 13100
Number of successful extensions: 23
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 23
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 23
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 69831885
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)