Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= prgv0271
         (690 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X13666-2|CAA31960.1| 2510|Drosophila melanogaster sevenless prot...    29   7.9  
X13666-1|CAB55310.1| 2554|Drosophila melanogaster sevenless prot...    29   7.9  
J03158-1|AAA28882.1| 2554|Drosophila melanogaster protein ( D.me...    29   7.9  
AE014298-1543|AAF47992.2| 2554|Drosophila melanogaster CG18085-P...    29   7.9  

>X13666-2|CAA31960.1| 2510|Drosophila melanogaster sevenless protein
            protein.
          Length = 2510

 Score = 28.7 bits (61), Expect = 7.9
 Identities = 12/31 (38%), Positives = 18/31 (58%), Gaps = 2/31 (6%)
 Frame = +3

Query: 603  RATWATVLRNCCVRTTGWAGYR--VPTWQAS 689
            R  W  + RNC VR   W+G R  +P ++A+
Sbjct: 967  RVYWTDLARNCVVRMDPWSGSRELLPVFEAN 997


>X13666-1|CAB55310.1| 2554|Drosophila melanogaster sevenless protein
            protein.
          Length = 2554

 Score = 28.7 bits (61), Expect = 7.9
 Identities = 12/31 (38%), Positives = 18/31 (58%), Gaps = 2/31 (6%)
 Frame = +3

Query: 603  RATWATVLRNCCVRTTGWAGYR--VPTWQAS 689
            R  W  + RNC VR   W+G R  +P ++A+
Sbjct: 1011 RVYWTDLARNCVVRMDPWSGSRELLPVFEAN 1041


>J03158-1|AAA28882.1| 2554|Drosophila melanogaster protein (
            D.melanogaster sevenlessprotein gene, complete cds. ).
          Length = 2554

 Score = 28.7 bits (61), Expect = 7.9
 Identities = 12/31 (38%), Positives = 18/31 (58%), Gaps = 2/31 (6%)
 Frame = +3

Query: 603  RATWATVLRNCCVRTTGWAGYR--VPTWQAS 689
            R  W  + RNC VR   W+G R  +P ++A+
Sbjct: 1011 RVYWTDLARNCVVRMDPWSGSRELLPVFEAN 1041


>AE014298-1543|AAF47992.2| 2554|Drosophila melanogaster CG18085-PA
            protein.
          Length = 2554

 Score = 28.7 bits (61), Expect = 7.9
 Identities = 12/31 (38%), Positives = 18/31 (58%), Gaps = 2/31 (6%)
 Frame = +3

Query: 603  RATWATVLRNCCVRTTGWAGYR--VPTWQAS 689
            R  W  + RNC VR   W+G R  +P ++A+
Sbjct: 1011 RVYWTDLARNCVVRMDPWSGSRELLPVFEAN 1041


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 28,850,603
Number of Sequences: 53049
Number of extensions: 607400
Number of successful extensions: 1426
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 1354
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1426
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3005453946
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)