Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= prgv0269
         (691 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292383-1|CAL23195.2|  320|Tribolium castaneum gustatory recept...    23   1.8  
AM292358-1|CAL23170.2|  331|Tribolium castaneum gustatory recept...    23   1.8  
AM292353-1|CAL23165.2|  651|Tribolium castaneum gustatory recept...    23   1.8  
AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory recept...    23   3.1  

>AM292383-1|CAL23195.2|  320|Tribolium castaneum gustatory receptor
           candidate 62 protein.
          Length = 320

 Score = 23.4 bits (48), Expect = 1.8
 Identities = 8/10 (80%), Positives = 10/10 (100%)
 Frame = +3

Query: 246 VLFQMIHLYY 275
           VLFQ+IH+YY
Sbjct: 108 VLFQLIHVYY 117


>AM292358-1|CAL23170.2|  331|Tribolium castaneum gustatory receptor
           candidate 37 protein.
          Length = 331

 Score = 23.4 bits (48), Expect = 1.8
 Identities = 8/10 (80%), Positives = 10/10 (100%)
 Frame = +3

Query: 246 VLFQMIHLYY 275
           VLFQ+IH+YY
Sbjct: 108 VLFQLIHVYY 117


>AM292353-1|CAL23165.2|  651|Tribolium castaneum gustatory receptor
           candidate 32 protein.
          Length = 651

 Score = 23.4 bits (48), Expect = 1.8
 Identities = 8/10 (80%), Positives = 10/10 (100%)
 Frame = +3

Query: 246 VLFQMIHLYY 275
           VLFQ+IH+YY
Sbjct: 428 VLFQLIHVYY 437


>AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory receptor
           candidate 61 protein.
          Length = 670

 Score = 22.6 bits (46), Expect = 3.1
 Identities = 8/32 (25%), Positives = 20/32 (62%)
 Frame = -2

Query: 207 LYILEIKKDPKWNPEVHPFSTWCLKIYFLSHL 112
           LY   ++K+P ++ +++ F+T+   + F+  L
Sbjct: 57  LYFASLEKNPLFDGQLYSFNTFAKLLIFVVSL 88


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 162,918
Number of Sequences: 336
Number of extensions: 3421
Number of successful extensions: 5
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18114270
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)