Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= prgv0266
         (693 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY753540-1|AAV28543.1| 3320|Anopheles gambiae SGS3 protein.            23   6.9  
AF281078-1|AAF82131.1| 2051|Anopheles gambiae vitellogenin 1 pro...    23   6.9  
AF444781-1|AAL37902.1| 1459|Anopheles gambiae Toll6 protein.           23   9.1  

>AY753540-1|AAV28543.1| 3320|Anopheles gambiae SGS3 protein.
          Length = 3320

 Score = 23.4 bits (48), Expect = 6.9
 Identities = 11/23 (47%), Positives = 13/23 (56%)
 Frame = +1

Query: 28   EFESLYETYEKENRFVXQVRAQV 96
            E+E +YE  E EN     VRA V
Sbjct: 2543 EYEGIYEGKESENNAPSVVRATV 2565


>AF281078-1|AAF82131.1| 2051|Anopheles gambiae vitellogenin 1 protein.
          Length = 2051

 Score = 23.4 bits (48), Expect = 6.9
 Identities = 17/55 (30%), Positives = 23/55 (41%), Gaps = 1/55 (1%)
 Frame = -3

Query: 325  FLKLYVLLSSTNIFSAIEAKLHTALH-HQMYIQLFQCTGYYILWYLNFSDYFFYY 164
            F   Y L+SS   F  +  K + + + HQ Y        YY  +   F DYF  Y
Sbjct: 934  FSTFYYLISSMETFFDLLDKQYDSYNKHQEYKSSDYYYKYYKQYPHLFKDYFSQY 988


>AF444781-1|AAL37902.1| 1459|Anopheles gambiae Toll6 protein.
          Length = 1459

 Score = 23.0 bits (47), Expect = 9.1
 Identities = 12/36 (33%), Positives = 20/36 (55%)
 Frame = -3

Query: 655  FNSTCRTVICPRLAGASVVCIIHSHTFAASSQLASS 548
            +N+T  +  C R+AG +  C   S  F+ SS+ + S
Sbjct: 1324 YNTTATS--CERIAGETFECTSTSSKFSTSSRGSGS 1357


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 681,036
Number of Sequences: 2352
Number of extensions: 14668
Number of successful extensions: 12
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 70250040
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)