Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= prgv0266
         (693 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY119149-1|AAM51009.1|  812|Drosophila melanogaster RE58177p pro...   161   6e-40
AF132143-1|AAD33590.1|  812|Drosophila melanogaster ribonucleosi...   161   6e-40
AE014134-1838|AAF52913.2|  812|Drosophila melanogaster CG5371-PA...   161   6e-40
AY118666-1|AAM50035.1|  791|Drosophila melanogaster SD26855p pro...    29   6.0  
AY060955-1|AAL28503.1|  809|Drosophila melanogaster GM08777p pro...    29   6.0  
AE014296-3270|AAZ66056.1| 4705|Drosophila melanogaster CG7749-PB...    29   6.0  
AE014296-3269|AAF49078.2| 4705|Drosophila melanogaster CG7749-PA...    29   6.0  

>AY119149-1|AAM51009.1|  812|Drosophila melanogaster RE58177p
           protein.
          Length = 812

 Score =  161 bits (392), Expect = 6e-40
 Identities = 77/106 (72%), Positives = 87/106 (82%)
 Frame = +3

Query: 255 AVCNLASIALNMFVDDNKTYNFKKLKEVTKTITENLNKIIDVNYYPVPEAKKSNLRHRPI 434
           AVCNLASIALNMFV   KTY+FKKLKEVTK +T+NLNKIID+NYYP+PEA+KSNLRHRP+
Sbjct: 453 AVCNLASIALNMFVTPEKTYDFKKLKEVTKIVTKNLNKIIDINYYPLPEARKSNLRHRPV 512

Query: 435 GIGVQGLADAFILMRLPYESPEAIN*INKYLKLFTMGALEASCELA 572
           GIG+QG ADA ILMR PYES EA     +  +    GALEASCELA
Sbjct: 513 GIGIQGFADALILMRFPYESEEAGLLNQQIFETIYYGALEASCELA 558



 Score =  140 bits (340), Expect = 1e-33
 Identities = 63/85 (74%), Positives = 71/85 (83%)
 Frame = +1

Query: 1   PGLADCWGKEFESLYETYEKENRFVXQVRAQVLWKAIIEAQVETGTPYMLFKDSCNRKSN 180
           PGL D WG EFE LYE YE+E R    V+AQ LW AIIEAQVETG PYMLFKD+CNRKSN
Sbjct: 368 PGLHDVWGDEFEKLYEKYEQEGRANRTVKAQSLWFAIIEAQVETGNPYMLFKDACNRKSN 427

Query: 181 QKNLGTIKCSNLCTEIVEYTSDDEV 255
           Q+N+GTIKCSNLCTEIVEY++ DE+
Sbjct: 428 QQNVGTIKCSNLCTEIVEYSAPDEI 452


>AF132143-1|AAD33590.1|  812|Drosophila melanogaster ribonucleoside
           reductase M1 subunitprotein.
          Length = 812

 Score =  161 bits (392), Expect = 6e-40
 Identities = 77/106 (72%), Positives = 87/106 (82%)
 Frame = +3

Query: 255 AVCNLASIALNMFVDDNKTYNFKKLKEVTKTITENLNKIIDVNYYPVPEAKKSNLRHRPI 434
           AVCNLASIALNMFV   KTY+FKKLKEVTK +T+NLNKIID+NYYP+PEA+KSNLRHRP+
Sbjct: 453 AVCNLASIALNMFVTPEKTYDFKKLKEVTKIVTKNLNKIIDINYYPLPEARKSNLRHRPV 512

Query: 435 GIGVQGLADAFILMRLPYESPEAIN*INKYLKLFTMGALEASCELA 572
           GIG+QG ADA ILMR PYES EA     +  +    GALEASCELA
Sbjct: 513 GIGIQGFADALILMRFPYESEEAGLLNQQIFETIYYGALEASCELA 558



 Score =  140 bits (340), Expect = 1e-33
 Identities = 63/85 (74%), Positives = 71/85 (83%)
 Frame = +1

Query: 1   PGLADCWGKEFESLYETYEKENRFVXQVRAQVLWKAIIEAQVETGTPYMLFKDSCNRKSN 180
           PGL D WG EFE LYE YE+E R    V+AQ LW AIIEAQVETG PYMLFKD+CNRKSN
Sbjct: 368 PGLHDVWGDEFEKLYEKYEQEGRANRTVKAQSLWFAIIEAQVETGNPYMLFKDACNRKSN 427

Query: 181 QKNLGTIKCSNLCTEIVEYTSDDEV 255
           Q+N+GTIKCSNLCTEIVEY++ DE+
Sbjct: 428 QQNVGTIKCSNLCTEIVEYSAPDEI 452


>AE014134-1838|AAF52913.2|  812|Drosophila melanogaster CG5371-PA
           protein.
          Length = 812

 Score =  161 bits (392), Expect = 6e-40
 Identities = 77/106 (72%), Positives = 87/106 (82%)
 Frame = +3

Query: 255 AVCNLASIALNMFVDDNKTYNFKKLKEVTKTITENLNKIIDVNYYPVPEAKKSNLRHRPI 434
           AVCNLASIALNMFV   KTY+FKKLKEVTK +T+NLNKIID+NYYP+PEA+KSNLRHRP+
Sbjct: 453 AVCNLASIALNMFVTPEKTYDFKKLKEVTKIVTKNLNKIIDINYYPLPEARKSNLRHRPV 512

Query: 435 GIGVQGLADAFILMRLPYESPEAIN*INKYLKLFTMGALEASCELA 572
           GIG+QG ADA ILMR PYES EA     +  +    GALEASCELA
Sbjct: 513 GIGIQGFADALILMRFPYESEEAGLLNQQIFETIYYGALEASCELA 558



 Score =  140 bits (340), Expect = 1e-33
 Identities = 63/85 (74%), Positives = 71/85 (83%)
 Frame = +1

Query: 1   PGLADCWGKEFESLYETYEKENRFVXQVRAQVLWKAIIEAQVETGTPYMLFKDSCNRKSN 180
           PGL D WG EFE LYE YE+E R    V+AQ LW AIIEAQVETG PYMLFKD+CNRKSN
Sbjct: 368 PGLHDVWGDEFEKLYEKYEQEGRANRTVKAQSLWFAIIEAQVETGNPYMLFKDACNRKSN 427

Query: 181 QKNLGTIKCSNLCTEIVEYTSDDEV 255
           Q+N+GTIKCSNLCTEIVEY++ DE+
Sbjct: 428 QQNVGTIKCSNLCTEIVEYSAPDEI 452


>AY118666-1|AAM50035.1|  791|Drosophila melanogaster SD26855p
           protein.
          Length = 791

 Score = 29.1 bits (62), Expect = 6.0
 Identities = 18/60 (30%), Positives = 25/60 (41%), Gaps = 2/60 (3%)
 Frame = +3

Query: 261 CNLASIALNMFVDDNKTYNFKKLKEVTKTITENLNKIIDVNYYPVPEAKKSNL--RHRPI 434
           C L  + L       +    +K K  +     NLN ++D + Y  P  K SNL    RPI
Sbjct: 668 CVLCCVVLKRSSSSKRRNRLEKDKNKSSYKEANLNSLVDKDNYCKPNVKLSNLEVNQRPI 727


>AY060955-1|AAL28503.1|  809|Drosophila melanogaster GM08777p
           protein.
          Length = 809

 Score = 29.1 bits (62), Expect = 6.0
 Identities = 18/60 (30%), Positives = 25/60 (41%), Gaps = 2/60 (3%)
 Frame = +3

Query: 261 CNLASIALNMFVDDNKTYNFKKLKEVTKTITENLNKIIDVNYYPVPEAKKSNL--RHRPI 434
           C L  + L       +    +K K  +     NLN ++D + Y  P  K SNL    RPI
Sbjct: 419 CVLCCVVLKRSSSSKRRNRLEKDKNKSSYKEANLNSLVDKDNYCKPNVKLSNLEVNQRPI 478


>AE014296-3270|AAZ66056.1| 4705|Drosophila melanogaster CG7749-PB,
            isoform B protein.
          Length = 4705

 Score = 29.1 bits (62), Expect = 6.0
 Identities = 18/60 (30%), Positives = 25/60 (41%), Gaps = 2/60 (3%)
 Frame = +3

Query: 261  CNLASIALNMFVDDNKTYNFKKLKEVTKTITENLNKIIDVNYYPVPEAKKSNL--RHRPI 434
            C L  + L       +    +K K  +     NLN ++D + Y  P  K SNL    RPI
Sbjct: 4315 CVLCCVVLKRSSSSKRRNRLEKDKNKSSYKEANLNSLVDKDNYCKPNVKLSNLEVNQRPI 4374


>AE014296-3269|AAF49078.2| 4705|Drosophila melanogaster CG7749-PA,
            isoform A protein.
          Length = 4705

 Score = 29.1 bits (62), Expect = 6.0
 Identities = 18/60 (30%), Positives = 25/60 (41%), Gaps = 2/60 (3%)
 Frame = +3

Query: 261  CNLASIALNMFVDDNKTYNFKKLKEVTKTITENLNKIIDVNYYPVPEAKKSNL--RHRPI 434
            C L  + L       +    +K K  +     NLN ++D + Y  P  K SNL    RPI
Sbjct: 4315 CVLCCVVLKRSSSSKRRNRLEKDKNKSSYKEANLNSLVDKDNYCKPNVKLSNLEVNQRPI 4374


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 27,729,947
Number of Sequences: 53049
Number of extensions: 510583
Number of successful extensions: 1123
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 1070
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1117
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3026039247
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)