Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= prgv0265
(687 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At5g59210.2 68418.m07421 myosin heavy chain-related contains wea... 35 0.044
At5g59210.1 68418.m07420 myosin heavy chain-related contains wea... 35 0.044
At1g69390.1 68414.m07966 chloroplast division protein, putative ... 30 1.7
At5g66720.2 68418.m08411 5-azacytidine resistance protein -relat... 28 5.0
At5g66720.1 68418.m08410 5-azacytidine resistance protein -relat... 28 5.0
At4g13310.2 68417.m02080 cytochrome P450 71A20, putative (CYP71A... 28 5.0
At4g13310.1 68417.m02081 cytochrome P450 71A20, putative (CYP71A... 28 5.0
At3g25590.1 68416.m03186 expressed protein 28 5.0
At2g18700.1 68415.m02178 glycosyl transferase family 20 protein ... 28 6.7
At3g43890.1 68416.m04698 DC1 domain-containing protein contains ... 27 8.8
At3g24630.1 68416.m03093 hypothetical protein 27 8.8
At1g64255.1 68414.m07280 SWIM zinc finger family protein contain... 27 8.8
>At5g59210.2 68418.m07421 myosin heavy chain-related contains weak
similarity to Myosin heavy chain, gizzard smooth muscle
(Swiss-Prot:P10587) [Gallus gallus]
Length = 433
Score = 35.1 bits (77), Expect = 0.044
Identities = 24/69 (34%), Positives = 38/69 (55%), Gaps = 3/69 (4%)
Frame = +2
Query: 86 ELSADTSNQDLE-EKLY--NSILTGDYDSAVRQSLEYESQGKGSIIQNVVNNLIIDKRRT 256
+L + NQ E EKL+ NS L+ Y ++ S ++E+Q K + QNV ++DK RT
Sbjct: 285 KLLMEIDNQSSEIEKLFEENSNLSASYQESINISNQWENQVKECLKQNVELREVLDKLRT 344
Query: 257 PWSTATSCG 283
+ + S G
Sbjct: 345 EQAGSFSRG 353
>At5g59210.1 68418.m07420 myosin heavy chain-related contains weak
similarity to Myosin heavy chain, gizzard smooth muscle
(Swiss-Prot:P10587) [Gallus gallus]
Length = 434
Score = 35.1 bits (77), Expect = 0.044
Identities = 24/69 (34%), Positives = 38/69 (55%), Gaps = 3/69 (4%)
Frame = +2
Query: 86 ELSADTSNQDLE-EKLY--NSILTGDYDSAVRQSLEYESQGKGSIIQNVVNNLIIDKRRT 256
+L + NQ E EKL+ NS L+ Y ++ S ++E+Q K + QNV ++DK RT
Sbjct: 286 KLLMEIDNQSSEIEKLFEENSNLSASYQESINISNQWENQVKECLKQNVELREVLDKLRT 345
Query: 257 PWSTATSCG 283
+ + S G
Sbjct: 346 EQAGSFSRG 354
>At1g69390.1 68414.m07966 chloroplast division protein, putative
(MinE1) identical to chloroplast division protein
homolog MinE1 GI:17511220 from [Arabidopsis thaliana]
Length = 229
Score = 29.9 bits (64), Expect = 1.7
Identities = 14/34 (41%), Positives = 21/34 (61%)
Frame = +2
Query: 59 MLAASAGVVELSADTSNQDLEEKLYNSILTGDYD 160
+LA + G ELS + Q++E LYN+I G +D
Sbjct: 70 VLARNTGDYELSPSPAEQEIESFLYNAINMGFFD 103
>At5g66720.2 68418.m08411 5-azacytidine resistance protein -related
contains weak similarity to 5-azacytidine resistance
protein azr1 (Swiss-Prot:Q09189) [Schizosaccharomyces
pombe]
Length = 411
Score = 28.3 bits (60), Expect = 5.0
Identities = 17/51 (33%), Positives = 28/51 (54%), Gaps = 1/51 (1%)
Frame = +2
Query: 122 EKLYNSILTGDYDSAVRQSLEYESQGKGSIIQNVVNNLIIDKRR-TPWSTA 271
+ LYN +TG S+VR L + +G I + +DK+R +P++TA
Sbjct: 337 DNLYNEEITGVVVSSVRAGL--DPKGTAQKIAELARQRAVDKKRQSPFATA 385
>At5g66720.1 68418.m08410 5-azacytidine resistance protein -related
contains weak similarity to 5-azacytidine resistance
protein azr1 (Swiss-Prot:Q09189) [Schizosaccharomyces
pombe]
Length = 414
Score = 28.3 bits (60), Expect = 5.0
Identities = 17/51 (33%), Positives = 28/51 (54%), Gaps = 1/51 (1%)
Frame = +2
Query: 122 EKLYNSILTGDYDSAVRQSLEYESQGKGSIIQNVVNNLIIDKRR-TPWSTA 271
+ LYN +TG S+VR L + +G I + +DK+R +P++TA
Sbjct: 340 DNLYNEEITGVVVSSVRAGL--DPKGTAQKIAELARQRAVDKKRQSPFATA 388
>At4g13310.2 68417.m02080 cytochrome P450 71A20, putative (CYP71A20)
Identical to Cytochrome P450 (SP:Q9T0K2) [Arabidopsis
thaliana]; similar to cytochrome P450 71A4, Solanum
melongena, PIR2:S36805
Length = 390
Score = 28.3 bits (60), Expect = 5.0
Identities = 15/39 (38%), Positives = 22/39 (56%)
Frame = +2
Query: 125 KLYNSILTGDYDSAVRQSLEYESQGKGSIIQNVVNNLII 241
K+ + IL+G D A EY Q K IQN++NN ++
Sbjct: 103 KVVDKILSGGRDVAFAPYGEYWRQMKSICIQNLLNNKMV 141
>At4g13310.1 68417.m02081 cytochrome P450 71A20, putative (CYP71A20)
Identical to Cytochrome P450 (SP:Q9T0K2) [Arabidopsis
thaliana]; similar to cytochrome P450 71A4, Solanum
melongena, PIR2:S36805
Length = 497
Score = 28.3 bits (60), Expect = 5.0
Identities = 15/39 (38%), Positives = 22/39 (56%)
Frame = +2
Query: 125 KLYNSILTGDYDSAVRQSLEYESQGKGSIIQNVVNNLII 241
K+ + IL+G D A EY Q K IQN++NN ++
Sbjct: 103 KVVDKILSGGRDVAFAPYGEYWRQMKSICIQNLLNNKMV 141
>At3g25590.1 68416.m03186 expressed protein
Length = 423
Score = 28.3 bits (60), Expect = 5.0
Identities = 14/40 (35%), Positives = 21/40 (52%)
Frame = -3
Query: 328 SLMGSTF*QFPVRCRPTACSSTPWCPSLVNDQVVNYILDD 209
SL ST +F R P+ S CP +ND++VN + +
Sbjct: 18 SLYYSTPSEFTCRKHPSVSSGVGICPYCLNDRLVNLVCSE 57
>At2g18700.1 68415.m02178 glycosyl transferase family 20 protein /
trehalose-phosphatase family protein similar to
trehalose-6-phosphate synthase SL-TPS/P [Selaginella
lepidophylla] GI:4100325; contains Pfam profiles
PF00982: Glycosyltransferase family 20, PF02358:
Trehalose-phosphatase
Length = 862
Score = 27.9 bits (59), Expect = 6.7
Identities = 17/63 (26%), Positives = 29/63 (46%)
Frame = -3
Query: 304 QFPVRCRPTACSSTPWCPSLVNDQVVNYILDDGXXXXXLIFQALTDSTVVVAGEDAVVQF 125
Q P+R SS WC ND + + D +++ ++ V+ + ++ V QF
Sbjct: 58 QLPLRAHRDI-SSNKWCFEFDNDSLYLQLKDGFPPETEVVYVGSLNADVLPSEQEDVSQF 116
Query: 124 LLE 116
LLE
Sbjct: 117 LLE 119
>At3g43890.1 68416.m04698 DC1 domain-containing protein contains
Pfam profile PF03107: DC1 domain
Length = 661
Score = 27.5 bits (58), Expect = 8.8
Identities = 17/40 (42%), Positives = 22/40 (55%), Gaps = 5/40 (12%)
Frame = +3
Query: 33 NFSLYLRCACSPPAR--ASLN---YPRTLLTKTSRRNCTT 137
NFSL L+C PP + LN +P TL+ K+ CTT
Sbjct: 228 NFSLDLQCVFHPPKQNPHDLNIHDHPLTLMPKSISFTCTT 267
>At3g24630.1 68416.m03093 hypothetical protein
Length = 724
Score = 27.5 bits (58), Expect = 8.8
Identities = 10/21 (47%), Positives = 13/21 (61%)
Frame = -1
Query: 639 KNHCSPGAVSAVAARIQHGHD 577
+ HC G VS+ AA I H H+
Sbjct: 536 QGHCDNGEVSSCAATIHHSHE 556
>At1g64255.1 68414.m07280 SWIM zinc finger family protein contains
Pfam profile PF04434: SWIM zinc finger
Length = 750
Score = 27.5 bits (58), Expect = 8.8
Identities = 11/23 (47%), Positives = 14/23 (60%)
Frame = +1
Query: 262 EYCYKLWVGNGQEIVRKYFPLNF 330
EY KL + +G + KYFPL F
Sbjct: 396 EYQLKLMIASGVDAANKYFPLAF 418
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,576,807
Number of Sequences: 28952
Number of extensions: 285588
Number of successful extensions: 782
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 757
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 782
length of database: 12,070,560
effective HSP length: 79
effective length of database: 9,783,352
effective search space used: 1457719448
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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