Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= prgv0264
         (691 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292333-1|CAL23145.2|  316|Tribolium castaneum gustatory recept...    26   0.33 
AM292334-1|CAL23146.2|  390|Tribolium castaneum gustatory recept...    25   0.58 
DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulati...    23   3.1  
AJ888865-1|CAI61930.1|  108|Tribolium castaneum modulator of act...    23   3.1  
AJ622939-1|CAF22091.1|  108|Tribolium castaneum ETS activity mod...    23   3.1  
EF633444-1|ABR32189.1|  721|Tribolium castaneum heat shock prote...    22   4.1  

>AM292333-1|CAL23145.2|  316|Tribolium castaneum gustatory receptor
           candidate 12 protein.
          Length = 316

 Score = 25.8 bits (54), Expect = 0.33
 Identities = 17/66 (25%), Positives = 28/66 (42%)
 Frame = +2

Query: 308 LLDLSTGVIMTNTAKILNFGRGNFAGQERNVADLDDGYARLSNMLLEAYSGADLTKRQFK 487
           +L L  G + +   KILN  +     ++    DLD+    LS      +S  D    + K
Sbjct: 231 ILILQCGRVRSEVVKILNVLKKIALRRQTTNGDLDELIVTLSTHYFPVFSACDYFTIETK 290

Query: 488 VLLAIL 505
            +L +L
Sbjct: 291 TVLDVL 296


>AM292334-1|CAL23146.2|  390|Tribolium castaneum gustatory receptor
           candidate 13 protein.
          Length = 390

 Score = 25.0 bits (52), Expect = 0.58
 Identities = 17/66 (25%), Positives = 28/66 (42%)
 Frame = +2

Query: 308 LLDLSTGVIMTNTAKILNFGRGNFAGQERNVADLDDGYARLSNMLLEAYSGADLTKRQFK 487
           +L L  G + +   KILN  +     ++    DLD+    LS      +S  D    + K
Sbjct: 305 ILILQCGRVRSEVVKILNVLKKIALRRQTTNGDLDELIVTLSAHYFPVFSACDYFTIETK 364

Query: 488 VLLAIL 505
            +L +L
Sbjct: 365 TVLDVL 370


>DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulation
           protein.
          Length = 947

 Score = 22.6 bits (46), Expect = 3.1
 Identities = 9/18 (50%), Positives = 13/18 (72%)
 Frame = -2

Query: 144 PLPPADLRLINASQLPLS 91
           P+ PADLRL+   +L L+
Sbjct: 363 PVTPADLRLLTRGRLVLT 380


>AJ888865-1|CAI61930.1|  108|Tribolium castaneum modulator of
           activity of ets genes protein.
          Length = 108

 Score = 22.6 bits (46), Expect = 3.1
 Identities = 10/23 (43%), Positives = 13/23 (56%)
 Frame = -1

Query: 514 RFTQNGKQHFKLSLGQICARISL 446
           RF  NGK    +SLG   +R+ L
Sbjct: 64  RFLMNGKALCLMSLGMFLSRVPL 86


>AJ622939-1|CAF22091.1|  108|Tribolium castaneum ETS activity
           modulator protein.
          Length = 108

 Score = 22.6 bits (46), Expect = 3.1
 Identities = 10/23 (43%), Positives = 13/23 (56%)
 Frame = -1

Query: 514 RFTQNGKQHFKLSLGQICARISL 446
           RF  NGK    +SLG   +R+ L
Sbjct: 64  RFLMNGKALCLMSLGMFLSRVPL 86


>EF633444-1|ABR32189.1|  721|Tribolium castaneum heat shock protein
           90 protein.
          Length = 721

 Score = 22.2 bits (45), Expect = 4.1
 Identities = 9/23 (39%), Positives = 12/23 (52%)
 Frame = +1

Query: 487 SAACHSA*TYGWNKPMDRITDSQ 555
           S  C +   YGW   M+RI  +Q
Sbjct: 584 SPCCITMRRYGWTANMERIMKAQ 606


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 170,672
Number of Sequences: 336
Number of extensions: 3747
Number of successful extensions: 7
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18114270
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)