Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= prgv0264
(691 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At1g51820.1 68414.m05841 leucine-rich repeat protein kinase, put... 32 0.41
At1g51850.1 68414.m05845 leucine-rich repeat protein kinase, put... 29 3.8
At4g23600.1 68417.m03399 coronatine-responsive tyrosine aminotra... 28 5.1
At3g17750.1 68416.m02265 protein kinase family protein contains ... 28 5.1
At1g51830.1 68414.m05843 leucine-rich repeat protein kinase, put... 28 5.1
At1g51805.1 68414.m05838 leucine-rich repeat protein kinase, put... 28 5.1
At3g04550.1 68416.m00483 expressed protein 28 6.7
At4g33140.1 68417.m04721 expressed protein 27 8.9
At3g03800.1 68416.m00390 syntaxin, putative (SYP131) similar to ... 27 8.9
At2g25320.1 68415.m03029 meprin and TRAF homology domain-contain... 27 8.9
At1g01220.1 68414.m00036 GHMP kinase-related contains similarity... 27 8.9
>At1g51820.1 68414.m05841 leucine-rich repeat protein kinase,
putative similar to light repressible receptor protein
kinase GI:1321686 from (Arabidopsis thaliana); contains
leucine rich repeat (LRR) domains, Pfam:PF00560;
contains protein kinase domain, Pfam:PF00069
Length = 885
Score = 31.9 bits (69), Expect = 0.41
Identities = 28/109 (25%), Positives = 50/109 (45%)
Frame = +2
Query: 329 VIMTNTAKILNFGRGNFAGQERNVADLDDGYARLSNMLLEAYSGADLTKRQFKVLLAILR 508
VIMTN + + G+G F + + A + + + G K + ++LL +
Sbjct: 574 VIMTNNFQRI-LGKGGFGMVYHGFVNGTEQVA-VKILSHSSSQGYKQFKAEVELLLRVHH 631
Query: 509 KPMGGINQWTESPILNLARLQSYLSNGAMKAKLELVRNRLMPGPGNGLK 655
K + G+ + + NLA + Y++NG +K + RNR + G LK
Sbjct: 632 KNLVGLVGYCDEGD-NLALIYEYMANGDLKEHMSGTRNRFILNWGTRLK 679
>At1g51850.1 68414.m05845 leucine-rich repeat protein kinase,
putative similar to light repressible receptor protein
kinase [Arabidopsis thaliana] gi|1321686|emb|CAA66376
Length = 865
Score = 28.7 bits (61), Expect = 3.8
Identities = 17/61 (27%), Positives = 31/61 (50%)
Frame = +2
Query: 473 KRQFKVLLAILRKPMGGINQWTESPILNLARLQSYLSNGAMKAKLELVRNRLMPGPGNGL 652
K + ++LL + K + G+ + + N+A + Y++NG +K + RNR G L
Sbjct: 600 KAEVELLLRVHHKNLVGLVGYCDEGE-NMALIYEYMANGDLKEHMSGTRNRFTLNWGTRL 658
Query: 653 K 655
K
Sbjct: 659 K 659
>At4g23600.1 68417.m03399 coronatine-responsive tyrosine
aminotransferase / tyrosine transaminase similar to
nicotianamine aminotransferase from Hordeum vulgare
[GI:6498122, GI:6469087]; contains Pfam profile PF00155
aminotransferase, classes I and II; identical to cDNA
coronatine-regulated tyrosine aminotransferase
(F9D16.70) GI:15076852
Length = 422
Score = 28.3 bits (60), Expect = 5.1
Identities = 17/48 (35%), Positives = 25/48 (52%), Gaps = 1/48 (2%)
Frame = -3
Query: 287 DLFRTLGCRRAF-LLVRIAATCRANRAMSSSTTPHSRTASSIENFGIQ 147
D+F TLGC++A L V I A +AN + S P S +N ++
Sbjct: 102 DVFMTLGCKQAIELAVDILAKPKANVLLPSPGFPWDLVRSIYKNLEVR 149
>At3g17750.1 68416.m02265 protein kinase family protein contains
Pfam profile: PF00069 Eukaryotic protein kinase domain
Length = 1138
Score = 28.3 bits (60), Expect = 5.1
Identities = 20/67 (29%), Positives = 34/67 (50%), Gaps = 1/67 (1%)
Frame = +2
Query: 290 DGVLRSLLDLSTGVIMTNTAKILNFGRGNFAGQERNVADLDD-GYARLSNMLLEAYSGAD 466
D V+R+ D G+I +++ + + R + + ERN+ D+DD A N A S +
Sbjct: 686 DAVVRNESDEPKGLIQSDSMIVSSTKRCSGSSSERNLRDMDDEKVASSRNSSPSALSHSS 745
Query: 467 LTKRQFK 487
T R+ K
Sbjct: 746 DTGREHK 752
>At1g51830.1 68414.m05843 leucine-rich repeat protein kinase,
putative similar to light repressible receptor protein
kinase GI:1321686 from [Arabidopsis thaliana]
Length = 675
Score = 28.3 bits (60), Expect = 5.1
Identities = 17/61 (27%), Positives = 31/61 (50%)
Frame = +2
Query: 473 KRQFKVLLAILRKPMGGINQWTESPILNLARLQSYLSNGAMKAKLELVRNRLMPGPGNGL 652
K + ++LL + K + G+ + + NLA + Y++NG +K + RN + G L
Sbjct: 410 KAEVELLLRVHHKNLVGLVGYCDEGE-NLALIYEYMANGDLKEHMSGTRNHFILNWGTRL 468
Query: 653 K 655
K
Sbjct: 469 K 469
>At1g51805.1 68414.m05838 leucine-rich repeat protein kinase,
putative similar to light repressible receptor protein
kinase [Arabidopsis thaliana] gi|1321686|emb|CAA66376;
contains leucine rich repeat (LRR) domains,
Pfam:PF00560; contains protein kinase domain,
Pfam:PF00069
Length = 884
Score = 28.3 bits (60), Expect = 5.1
Identities = 26/103 (25%), Positives = 49/103 (47%), Gaps = 2/103 (1%)
Frame = +2
Query: 329 VIMTNTAKILNFGRGNFAGQERNVADLDDGYARLSNMLLEAYS--GADLTKRQFKVLLAI 502
VIMTN + + G+G F + G +++ +L S G K + ++LL +
Sbjct: 573 VIMTNNFQRI-LGKGGFGIVYHGFVN---GVEQVAVKILSHSSSQGYKQFKAEVELLLRV 628
Query: 503 LRKPMGGINQWTESPILNLARLQSYLSNGAMKAKLELVRNRLM 631
K + G+ + + N+A + Y++NG +K + RNR +
Sbjct: 629 HHKNLVGLVGYCDEGE-NMALIYEYMANGDLKEHMSGTRNRFI 670
>At3g04550.1 68416.m00483 expressed protein
Length = 449
Score = 27.9 bits (59), Expect = 6.7
Identities = 18/60 (30%), Positives = 31/60 (51%), Gaps = 5/60 (8%)
Frame = +2
Query: 380 AGQERNVADLDDG-YARLSNMLLEAYSGADLTKRQFK----VLLAILRKPMGGINQWTES 544
A + RNV + DDG Y ++ L+ G+DL R+ K +++ ++R P + W S
Sbjct: 385 ADRVRNVVEADDGYYLVVAENGLKLEKGSDLKAREVKESLGMVVLVVRPPREDDDDWQTS 444
>At4g33140.1 68417.m04721 expressed protein
Length = 353
Score = 27.5 bits (58), Expect = 8.9
Identities = 11/29 (37%), Positives = 15/29 (51%)
Frame = +2
Query: 83 N*EDSGSCDALISRRSAGGRGTGFQSSQC 169
N +SGSC+ L + GG+ GF C
Sbjct: 63 NNNNSGSCNGLFKVKGGGGKPKGFTLRSC 91
>At3g03800.1 68416.m00390 syntaxin, putative (SYP131) similar to
SP|Q9ZSD4 Syntaxin 121 (AtSYP121) (Syntaxin-related
protein At-Syr1) {Arabidopsis thaliana}
Length = 306
Score = 27.5 bits (58), Expect = 8.9
Identities = 23/98 (23%), Positives = 40/98 (40%), Gaps = 1/98 (1%)
Frame = +2
Query: 359 NFGRGNFAGQERNVADLDDGYARLSNMLLEAYSGADLTKRQFKVLLAILRKP-MGGINQW 535
N G +G + V +++ Y +L L + + TK A+ + P M I Q
Sbjct: 29 NSGDLGLSGFFKKVQEIEKQYEKLDKHLNKLQGAHEETK-------AVTKAPAMKSIKQR 81
Query: 536 TESPILNLARLQSYLSNGAMKAKLELVRNRLMPGPGNG 649
E + + R+ ++ + E + NR PG G G
Sbjct: 82 MERDVDEVGRISRFIKGKIEELDRENLENRTKPGCGKG 119
>At2g25320.1 68415.m03029 meprin and TRAF homology domain-containing
protein / MATH domain-containing protein weak similarity
to ubiquitin-specific protease 12 [Arabidopsis thaliana]
GI:11993471; contains Pfam profile PF00917: MATH domain
Length = 1663
Score = 27.5 bits (58), Expect = 8.9
Identities = 20/94 (21%), Positives = 45/94 (47%), Gaps = 2/94 (2%)
Frame = +1
Query: 31 TRLYESRVRCLTKSQCLELRRQRKL*RVDKSQISRWKRDWIPKFSMLLAVLEW--GVVDD 204
T+ S + L++S+ R + ++ + + + SR K+D + +F + + LEW D
Sbjct: 1371 TKEKSSITQKLSESEAANTRLKSEM-KAEADRFSREKKDLVEQFRDVESQLEWIRSERQD 1429
Query: 205 DMARLARQVAAILTNKNARRQPSVLNKSRWSSEV 306
++ +L+ + +L + L K+R E+
Sbjct: 1430 EIDKLSSEKKTLLDRLHEAETQLALQKTRKRDEL 1463
>At1g01220.1 68414.m00036 GHMP kinase-related contains similarity to
L-fucose kinase [Homo sapiens] gi|21212956|emb|CAD29647
Length = 1055
Score = 27.5 bits (58), Expect = 8.9
Identities = 15/42 (35%), Positives = 20/42 (47%), Gaps = 3/42 (7%)
Frame = -3
Query: 188 HSRTASSIENFGIQSL---FHLLICDLSTRHSFRCLLSSKHC 72
+ T S G QS+ H+ DL T SFR +L +HC
Sbjct: 414 YDSTVSGAVQIGSQSIVVGIHIPSEDLGTPESFRFMLPDRHC 455
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,937,623
Number of Sequences: 28952
Number of extensions: 350925
Number of successful extensions: 960
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 938
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 960
length of database: 12,070,560
effective HSP length: 79
effective length of database: 9,783,352
effective search space used: 1467502800
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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