Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= prgv0263
         (687 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ439353-6|CAD27928.1|  695|Anopheles gambiae putative G-protein...    25   3.0  
AJ439353-3|CAD27925.1| 1200|Anopheles gambiae putative TPR-conta...    25   3.0  
AY753541-1|AAV28544.1| 3398|Anopheles gambiae SGS4 protein.            23   9.0  

>AJ439353-6|CAD27928.1|  695|Anopheles gambiae putative G-protein
           coupled receptor protein.
          Length = 695

 Score = 24.6 bits (51), Expect = 3.0
 Identities = 8/17 (47%), Positives = 11/17 (64%)
 Frame = -2

Query: 578 KNLNHFMDLYPICIQLI 528
           + L HF   YPIC+ L+
Sbjct: 213 RRLRHFNAFYPICLNLL 229


>AJ439353-3|CAD27925.1| 1200|Anopheles gambiae putative
           TPR-containing phosphoprotein protein.
          Length = 1200

 Score = 24.6 bits (51), Expect = 3.0
 Identities = 9/27 (33%), Positives = 17/27 (62%)
 Frame = +1

Query: 364 MLGRLCCVLSVREXRGA*FYYFKNIKT 444
           +LG+ C   + ++ RGA  +Y K ++T
Sbjct: 165 LLGKACIAFNKKDYRGALAFYKKALRT 191


>AY753541-1|AAV28544.1| 3398|Anopheles gambiae SGS4 protein.
          Length = 3398

 Score = 23.0 bits (47), Expect = 9.0
 Identities = 8/12 (66%), Positives = 10/12 (83%)
 Frame = -3

Query: 49   STGATNGVNRPP 14
            STG++N  NRPP
Sbjct: 1627 STGSSNSCNRPP 1638


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 663,635
Number of Sequences: 2352
Number of extensions: 12779
Number of successful extensions: 8
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 69413730
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)